AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1245480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245480 MtrunA17_Chr8g0355191 95.943 419 14 2 1 418 1 417 0.0 835
Msa1245480 MtrunA17_Chr8g0355181 72.236 407 90 10 1 404 1 387 0.0 528
Msa1245480 MtrunA17_Chr4g0073521 76.023 171 41 0 56 226 46 216 2.00e-95 290
Msa1245480 MtrunA17_Chr7g0216601 62.555 227 68 3 48 271 56 268 7.20e-92 282
Msa1245480 MtrunA17_Chr4g0002011 59.592 245 68 5 52 265 31 275 1.24e-86 266
Msa1245480 MtrunA17_Chr6g0452911 69.318 176 44 1 61 226 65 240 1.44e-83 260
Msa1245480 MtrunA17_Chr8g0362541 66.832 202 52 2 56 243 68 268 2.41e-80 253
Msa1245480 MtrunA17_Chr5g0400871 65.934 182 57 2 43 221 237 416 1.47e-77 250
Msa1245480 MtrunA17_Chr2g0328971 54.661 236 93 4 5 228 105 338 1.32e-76 247
Msa1245480 MtrunA17_Chr4g0072291 66.864 169 53 1 56 221 158 326 2.56e-76 246
Msa1245480 MtrunA17_Chr4g0072291 43.023 86 41 1 153 230 156 241 1.37e-12 69.3
Msa1245480 MtrunA17_Chr8g0343851 55.607 214 91 1 56 265 247 460 6.29e-76 246
Msa1245480 MtrunA17_Chr3g0135161 57.080 226 85 4 1 221 256 474 1.82e-75 247
Msa1245480 MtrunA17_Chr1g0152161 56.388 227 85 4 1 221 258 476 3.30e-75 246
Msa1245480 MtrunA17_Chr7g0249621 66.477 176 56 1 56 228 258 433 4.27e-75 247
Msa1245480 MtrunA17_Chr4g0032631 62.921 178 63 1 56 230 162 339 6.07e-75 243
Msa1245480 MtrunA17_Chr4g0054351 54.386 228 92 5 8 230 267 487 3.63e-72 238
Msa1245480 MtrunA17_Chr5g0412151 67.456 169 52 1 56 221 223 391 1.15e-66 221
Msa1245480 MtrunA17_Chr5g0412151 43.023 86 41 1 153 230 221 306 6.64e-13 70.5
Msa1245480 MtrunA17_Chr8g0367311 69.531 128 39 0 94 221 22 149 8.03e-58 190
Msa1245480 MtrunA17_Chr2g0305821 73.874 111 29 0 57 167 47 157 3.02e-48 162
Msa1245480 MtrunA17_Chr7g0257361 53.514 185 76 4 4 185 6 183 3.82e-47 167
Msa1245480 MtrunA17_Chr7g0263581 46.875 192 86 4 61 244 140 323 1.17e-40 150
Msa1245480 MtrunA17_Chr5g0401891 52.381 168 72 2 61 228 153 312 3.12e-40 150
Msa1245480 MtrunA17_Chr4g0053181 52.976 168 65 3 61 225 177 333 8.08e-40 149
Msa1245480 MtrunA17_Chr4g0030191 45.408 196 93 3 61 253 132 316 1.10e-37 142
Msa1245480 MtrunA17_Chr2g0305831 57.143 98 38 1 163 260 1 94 4.97e-32 120
Msa1245480 MtrunA17_Chr2g0325911 45.550 191 75 4 39 226 113 277 2.69e-30 121
Msa1245480 MtrunA17_Chr3g0126151 40.984 122 61 2 86 197 18 138 1.32e-21 90.5
Msa1245480 MtrunA17_Chr1g0170761 38.411 151 71 5 37 176 106 245 6.64e-12 66.6
Msa1245480 MtrunA17_Chr8g0367321 57.447 47 20 0 47 93 145 191 1.27e-11 63.5
Msa1245480 MtrunA17_Chr5g0432821 40.777 103 54 3 143 241 103 202 5.43e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245480 AT3G54320.1 53.646 384 132 15 21 376 27 392 4.14e-99 303
Msa1245480 AT3G54320.3 53.646 384 132 15 21 376 27 392 4.21e-99 302
Msa1245480 AT1G79700.2 63.274 226 71 4 45 260 37 260 3.24e-78 245
Msa1245480 AT5G57390.2 60.577 208 74 4 17 221 47 249 5.63e-78 248
Msa1245480 AT5G57390.2 38.835 103 47 2 153 247 79 173 1.03e-11 67.0
Msa1245480 AT5G57390.1 60.476 210 75 4 15 221 163 367 4.76e-77 249
Msa1245480 AT5G57390.1 38.835 103 47 2 153 247 197 291 8.93e-12 67.4
Msa1245480 AT1G16060.1 69.841 189 53 2 45 230 43 230 1.01e-75 239
Msa1245480 AT1G51190.1 64.607 178 60 1 56 230 186 363 4.53e-75 244
Msa1245480 AT1G51190.1 40.741 108 48 3 147 246 178 277 2.39e-12 68.9
Msa1245480 AT5G17430.2 65.341 176 58 1 56 228 144 319 2.07e-74 241
Msa1245480 AT5G17430.2 40.196 102 45 3 153 246 142 235 4.77e-11 65.1
Msa1245480 AT4G37750.1 50.813 246 115 3 14 255 239 482 2.15e-74 242
Msa1245480 AT5G17430.1 65.341 176 58 1 56 228 206 381 4.49e-74 242
Msa1245480 AT5G17430.1 40.196 102 45 3 153 246 204 297 4.38e-11 65.1
Msa1245480 AT3G20840.1 63.636 176 61 1 56 228 177 352 1.41e-73 241
Msa1245480 AT3G20840.1 38.889 108 50 3 147 246 169 268 1.20e-11 67.0
Msa1245480 AT1G72570.1 56.279 215 82 4 12 221 180 387 1.89e-73 236
Msa1245480 AT5G65510.4 60.302 199 76 1 26 221 139 337 6.90e-70 227
Msa1245480 AT5G65510.2 60.302 199 76 1 26 221 197 395 1.08e-69 228
Msa1245480 AT5G65510.1 60.302 199 76 1 26 221 197 395 1.08e-69 228
Msa1245480 AT3G54320.4 51.475 305 112 11 94 376 36 326 3.02e-69 223
Msa1245480 AT3G54320.5 51.475 305 112 11 94 376 36 326 3.02e-69 223
Msa1245480 AT1G79700.1 58.850 226 71 5 45 260 37 250 8.51e-68 218
Msa1245480 AT5G10510.2 60.714 196 76 1 26 221 197 391 2.45e-67 223
Msa1245480 AT5G10510.7 59.799 199 76 2 26 221 197 394 3.27e-65 218
Msa1245480 AT5G10510.7 36.893 103 49 2 153 247 224 318 1.56e-11 66.6
Msa1245480 AT5G10510.5 59.799 199 76 2 26 221 197 394 3.27e-65 218
Msa1245480 AT5G10510.5 36.893 103 49 2 153 247 224 318 1.56e-11 66.6
Msa1245480 AT5G10510.1 59.799 199 76 2 26 221 220 417 4.19e-65 218
Msa1245480 AT5G10510.1 36.893 103 49 2 153 247 247 341 1.46e-11 66.6
Msa1245480 AT5G10510.6 59.799 199 76 2 26 221 235 432 6.63e-65 218
Msa1245480 AT5G10510.6 36.893 103 49 2 153 247 262 356 1.36e-11 66.6
Msa1245480 AT5G10510.4 59.799 199 76 2 26 221 235 432 6.63e-65 218
Msa1245480 AT5G10510.4 36.893 103 49 2 153 247 262 356 1.36e-11 66.6
Msa1245480 AT5G65510.3 58.333 168 67 1 26 190 139 306 5.25e-63 206
Msa1245480 AT5G65510.3 43.023 86 40 2 158 235 172 256 7.43e-12 66.2
Msa1245480 AT5G10510.3 53.881 219 77 2 26 221 235 452 6.66e-61 208
Msa1245480 AT1G79700.3 63.218 174 55 3 94 260 13 184 2.26e-54 181
Msa1245480 AT1G79700.4 63.218 174 55 3 94 260 7 178 2.49e-54 180
Msa1245480 AT1G16060.3 74.453 137 34 1 94 230 25 160 9.92e-52 175
Msa1245480 AT2G41710.4 41.897 253 134 4 23 272 34 276 1.38e-45 164
Msa1245480 AT2G41710.1 41.897 253 134 4 23 272 34 276 1.53e-45 163
Msa1245480 AT3G54320.2 49.167 240 96 8 134 351 1 236 3.59e-45 158
Msa1245480 AT2G41710.2 41.085 258 134 5 23 272 34 281 3.49e-43 157
Msa1245480 AT1G16060.2 78.351 97 20 1 134 230 1 96 2.23e-40 143
Msa1245480 AT1G16060.4 78.351 97 20 1 134 230 1 96 2.23e-40 143
Msa1245480 AT1G16060.6 78.351 97 20 1 134 230 1 96 2.23e-40 143
Msa1245480 AT1G16060.5 78.351 97 20 1 134 230 1 96 2.23e-40 143
Msa1245480 AT4G36920.1 42.857 238 114 7 61 289 132 356 2.31e-40 149
Msa1245480 AT4G36920.2 42.857 238 114 7 61 289 132 356 2.31e-40 149
Msa1245480 AT5G67180.2 47.150 193 90 3 61 253 97 277 4.13e-40 145
Msa1245480 AT2G28550.3 49.708 171 78 2 61 231 154 316 9.07e-40 148
Msa1245480 AT5G67180.3 52.174 161 69 2 61 221 97 249 1.34e-39 143
Msa1245480 AT5G67180.1 47.150 193 90 3 61 253 97 277 1.69e-39 145
Msa1245480 AT2G41710.3 36.806 288 134 5 23 272 34 311 4.96e-39 146
Msa1245480 AT2G28550.4 50.365 137 60 2 61 197 154 282 9.18e-31 121
Msa1245480 AT2G28550.1 45.977 174 65 4 61 231 154 301 1.11e-30 123
Msa1245480 AT5G67180.4 50.365 137 60 2 61 197 97 225 3.16e-30 117
Msa1245480 AT2G28550.2 50.794 126 48 3 61 183 154 268 6.19e-25 103
Msa1245480 AT2G28550.6 50.794 126 48 3 61 183 154 268 6.19e-25 103
Msa1245480 AT1G16060.7 72.973 74 19 1 157 230 2 74 1.95e-23 97.4
Msa1245480 AT2G28550.5 46.377 138 58 2 94 231 14 135 2.45e-23 99.4
Msa1245480 AT2G39250.2 43.443 122 62 1 40 161 88 202 2.96e-21 92.4
Msa1245480 AT2G39250.1 43.443 122 62 1 40 161 88 202 5.16e-21 93.6
Msa1245480 AT5G60120.4 45.185 135 66 2 48 182 148 274 8.50e-20 91.3
Msa1245480 AT5G60120.3 45.185 135 66 2 48 182 148 274 8.50e-20 91.3
Msa1245480 AT5G60120.5 45.185 135 66 2 48 182 148 274 8.50e-20 91.3
Msa1245480 AT5G60120.1 45.652 138 61 3 48 182 148 274 1.06e-19 91.7
Msa1245480 AT5G60120.6 45.652 138 61 3 48 182 148 274 1.11e-19 91.3
Msa1245480 AT5G60120.2 45.652 138 61 3 48 182 148 274 1.33e-19 91.3
Msa1245480 AT3G54990.2 45.192 104 50 1 61 164 123 219 2.97e-16 78.6
Msa1245480 AT3G54990.1 45.192 104 50 1 61 164 123 219 7.82e-16 78.6
Msa1245480 AT4G27950.1 39.423 104 55 4 159 261 117 213 4.50e-11 64.3

Find 84 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTAACAAGTACCTCTATT+TGG 0.207325 8_2:+35588678 Msa1245480:CDS
CCTTGTAACTCCTCTGTAAA+TGG 0.235394 8_2:-35586306 None:intergenic
TCCAATGCTTCTTCGGAATC+AGG 0.245762 8_2:-35590983 None:intergenic
TCATCATCTTCATCTTCTAT+TGG 0.261290 8_2:+35586158 Msa1245480:CDS
GAAGATTTGAAGCTCATCTA+TGG 0.274505 8_2:+35586472 Msa1245480:CDS
CCATGGAGCTTCATGTATAA+TGG 0.274823 8_2:+35591151 Msa1245480:CDS
ATGCGCAATAGTTAATATTA+TGG 0.304733 8_2:+35591105 Msa1245480:CDS
TATCAATATCGGTGAAGTTT+TGG 0.306250 8_2:+35591327 Msa1245480:CDS
TTCTACTGCCACCATTTGTT+TGG 0.309446 8_2:-35586277 None:intergenic
ATCTATGGGATAAGACTTCT+TGG 0.321379 8_2:+35586487 Msa1245480:CDS
TGCAAAAGAGTTTGAGGAAA+TGG 0.326215 8_2:+35587951 Msa1245480:CDS
GTAGTTGCTTATATCAAAAT+TGG 0.328027 8_2:-35590879 None:intergenic
TTGATCAAATTAGACATAGA+TGG 0.349087 8_2:+35586445 Msa1245480:intron
TCTTGCAGCACTCAAGTATT+GGG 0.356416 8_2:+35587251 Msa1245480:CDS
TTGTTCTTCCAATGCTTCTT+CGG 0.362093 8_2:-35590990 None:intergenic
GAGCTTCCCACCGACCATTA+TGG 0.381198 8_2:-35588639 None:intergenic
GATTTAATGAATATATTTGA+TGG 0.394335 8_2:+35591226 Msa1245480:CDS
TTGAATAGGCATCACCATAA+TGG 0.407675 8_2:+35588625 Msa1245480:intron
TTGGAGGGTATTGATCTTTG+TGG 0.411525 8_2:+35591346 Msa1245480:CDS
CTAAATACCGTGGGGTTGCC+AGG 0.413317 8_2:+35588043 Msa1245480:CDS
GGCAGCAGTGGCTTATGATA+TGG 0.413991 8_2:+35590823 Msa1245480:CDS
CTTGAGTGCTGCAAGATCAT+AGG 0.421646 8_2:-35587244 None:intergenic
GGTAACAAGTACCTCTATTT+GGG 0.424196 8_2:+35588679 Msa1245480:CDS
ATCTTGCAGCACTCAAGTAT+TGG 0.430524 8_2:+35587250 Msa1245480:CDS
AAATCAAGATGCCGGAGATA+TGG 0.435000 8_2:+35591378 Msa1245480:CDS
AACTTATGCAAAAGAGTTTG+AGG 0.450069 8_2:+35587945 Msa1245480:CDS
CCCTGATTCCGAAGAAGCAT+TGG 0.450167 8_2:+35590982 Msa1245480:CDS
AAGAGTATTTGAACTCTTTG+CGG 0.450951 8_2:+35587989 Msa1245480:CDS
CCAATGCTTCTTCGGAATCA+GGG 0.466066 8_2:-35590982 None:intergenic
TACTGTATGTGCCCAAATAG+AGG 0.474137 8_2:-35588690 None:intergenic
TGAAGCTCCATGGATAATCT+TGG 0.475912 8_2:-35591141 None:intergenic
CCATTTACAGAGGAGTTACA+AGG 0.477815 8_2:+35586306 Msa1245480:CDS
GGTGAAAGTGATATCAATAT+CGG 0.479712 8_2:+35591316 Msa1245480:CDS
CAAATTAGACATAGATGGAC+TGG 0.497245 8_2:+35586450 Msa1245480:intron
ATTGCGCATTCATGACTAGT+TGG 0.500701 8_2:-35591091 None:intergenic
AACTCAAGAAGAGGCAGCAG+TGG 0.504028 8_2:+35590811 Msa1245480:CDS
CAACTACATGGACAAATTGA+AGG 0.505278 8_2:+35590895 Msa1245480:CDS
CTCATCCGCAACCATATCTC+CGG 0.510091 8_2:-35591389 None:intergenic
TTTGTATCATTCAAATGAAG+AGG 0.512964 8_2:+35586117 None:intergenic
ACTGTAGTGGTTGAAGATGA+TGG 0.521228 8_2:-35591463 None:intergenic
ACAATTTCTGTGTTTGATTG+TGG 0.530549 8_2:-35590950 None:intergenic
CTGTAGTGGTTGAAGATGAT+GGG 0.533520 8_2:-35591462 None:intergenic
GAACAAGATTCAGAACAAGA+AGG 0.536583 8_2:+35586509 Msa1245480:CDS
CCATTATACATGAAGCTCCA+TGG 0.539343 8_2:-35591151 None:intergenic
GAGGGTATTGATCTTTGTGG+AGG 0.540704 8_2:+35591349 Msa1245480:CDS
GAGGACTTTCTAAATACCGT+GGG 0.549435 8_2:+35588034 Msa1245480:CDS
TATTGAAGAAACTCAAGAAG+AGG 0.551880 8_2:+35590802 Msa1245480:intron
TGTTGAAATTGTTGCTGCGA+AGG 0.552598 8_2:-35591058 None:intergenic
GGTCGGTGGGAAGCTCGCAT+TGG 0.557991 8_2:+35588646 Msa1245480:CDS
TTGTCAGAGTTTCAAGACAC+AGG 0.563746 8_2:+35591175 Msa1245480:CDS
GCTTATATCAAAATTGGTCA+CGG 0.566773 8_2:-35590873 None:intergenic
GCTCGCATTGGAAGAGTTCG+TGG 0.568186 8_2:+35588658 Msa1245480:CDS
GCGCATTCATGACTAGTTGG+AGG 0.568657 8_2:-35591088 None:intergenic
GATGATGAACTTGAAGATGG+TGG 0.569284 8_2:-35586143 None:intergenic
AAGATTTGAAGCTCATCTAT+GGG 0.572069 8_2:+35586473 Msa1245480:CDS
CAGAACAAGAAGGGAAAACA+AGG 0.573233 8_2:+35586519 Msa1245480:CDS
TGAGAATAGTAACAAGGAGA+AGG 0.577773 8_2:+35591408 Msa1245480:CDS
GAAGAACCTTGTGGTGGTCG+TGG 0.579789 8_2:+35591295 Msa1245480:CDS
AACAAGATTCAGAACAAGAA+GGG 0.581787 8_2:+35586510 Msa1245480:CDS
CAATGCTTCTTCGGAATCAG+GGG 0.588294 8_2:-35590981 None:intergenic
GGATTATTAAATCAAGATGC+CGG 0.588355 8_2:+35591370 Msa1245480:CDS
GAAGATGATGAACTTGAAGA+TGG 0.588912 8_2:-35586146 None:intergenic
GGCATCACCATAATGGTCGG+TGG 0.592230 8_2:+35588632 Msa1245480:intron
CTTGCAGCACTCAAGTATTG+GGG 0.601900 8_2:+35587252 Msa1245480:CDS
TCTTTGCGGCGGCAAAGCAG+TGG 0.603859 8_2:+35588003 Msa1245480:CDS
GCATCACCATAATGGTCGGT+GGG 0.611752 8_2:+35588633 Msa1245480:CDS
AGAGGACTTTCTAAATACCG+TGG 0.626454 8_2:+35588033 Msa1245480:CDS
AGATGCCGGAGATATGGTTG+CGG 0.636719 8_2:+35591384 Msa1245480:CDS
TTGCAGCACTCAAGTATTGG+GGG 0.650524 8_2:+35587253 Msa1245480:CDS
AGAAGAAGCTCCATTTACAG+AGG 0.653025 8_2:+35586296 Msa1245480:CDS
CTTTCACCACGACCACCACA+AGG 0.654037 8_2:-35591301 None:intergenic
AGTATTTGAACTCTTTGCGG+CGG 0.655198 8_2:+35587992 Msa1245480:CDS
TATCTAACCTGGCAACCCCA+CGG 0.657827 8_2:-35588050 None:intergenic
CTACATGGACAAATTGAAGG+TGG 0.658749 8_2:+35590898 Msa1245480:CDS
GGTTCGACTATGAGTAAGTG+TGG 0.660392 8_2:+35591196 Msa1245480:CDS
TGTAGTGGTTGAAGATGATG+GGG 0.666549 8_2:-35591461 None:intergenic
ATAGGCATCACCATAATGGT+CGG 0.667124 8_2:+35588629 Msa1245480:intron
TAGTTACAAAGAAACTGTAG+TGG 0.679816 8_2:-35591476 None:intergenic
ATTTGAACTTATGTTCAACA+CGG 0.681855 8_2:+35591273 Msa1245480:CDS
TGCGGATGAGAATAGTAACA+AGG 0.687710 8_2:+35591402 Msa1245480:CDS
AACACGGAAGAACCTTGTGG+TGG 0.703150 8_2:+35591289 Msa1245480:CDS
AGGACTTTCTAAATACCGTG+GGG 0.721413 8_2:+35588035 Msa1245480:CDS
TTCAACACGGAAGAACCTTG+TGG 0.731490 8_2:+35591286 Msa1245480:CDS
ATGGCAGCAATAAAGCACAG+AGG 0.789593 8_2:+35590842 Msa1245480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTATTATTGATTTG+TGG + chr8_2:35587146-35587165 Msa1245480:intron 10.0%
!!! ATTATTTAGTATTTCTAAAT+TGG + chr8_2:35587305-35587324 Msa1245480:intron 10.0%
!! ATATGTTAAATTAAATTGTA+CGG - chr8_2:35587863-35587882 None:intergenic 10.0%
!! ATAATATTATTAAAGTAATG+TGG - chr8_2:35588515-35588534 None:intergenic 10.0%
!!! AAACAATTTTTGATAAAAAA+TGG - chr8_2:35588740-35588759 None:intergenic 10.0%
!! TATATAATTAATATGAAACA+CGG - chr8_2:35589086-35589105 None:intergenic 10.0%
!!! AAGATTTTTTTTATTAAAAG+TGG - chr8_2:35589823-35589842 None:intergenic 10.0%
!!! ACATATTTTCATTTTTATTA+TGG - chr8_2:35590058-35590077 None:intergenic 10.0%
!!! TTTTGAAGTTAATTTAAAAT+TGG - chr8_2:35590334-35590353 None:intergenic 10.0%
!! ATATAATTTAGTGTAATCAT+AGG + chr8_2:35586672-35586691 Msa1245480:intron 15.0%
!! CAAATAATAAAAAATTCACA+AGG - chr8_2:35586796-35586815 None:intergenic 15.0%
!!! CTTGTGAATTTTTTATTATT+TGG + chr8_2:35586794-35586813 Msa1245480:intron 15.0%
!!! TTAATATTAGCTTTTTTTTC+TGG - chr8_2:35586844-35586863 None:intergenic 15.0%
!!! GAAATACTAAATAATTTTAC+CGG - chr8_2:35587300-35587319 None:intergenic 15.0%
!!! TTATTTTTCCAAAACAATAT+AGG - chr8_2:35587351-35587370 None:intergenic 15.0%
!!! ATTTTTTAGAGATTTGATAT+TGG + chr8_2:35587591-35587610 Msa1245480:intron 15.0%
!!! ATTTTCTGTGTTAATTTTAA+AGG + chr8_2:35587836-35587855 Msa1245480:intron 15.0%
!!! TTTTCTGTGTTAATTTTAAA+GGG + chr8_2:35587837-35587856 Msa1245480:intron 15.0%
!!! ATTAATCTTACTTTTTGAAT+AGG + chr8_2:35588611-35588630 Msa1245480:intron 15.0%
!! ACATAATTTAGTGTAATTAT+AGG + chr8_2:35589002-35589021 Msa1245480:intron 15.0%
!!! ATTAGTATAATTTTACACTA+AGG - chr8_2:35589475-35589494 None:intergenic 15.0%
!!! TTTTTTTTGTCTTCTTTTTT+TGG + chr8_2:35589622-35589641 Msa1245480:intron 15.0%
!! TTTCACTATTATTATATTCT+AGG + chr8_2:35590077-35590096 Msa1245480:intron 15.0%
!! GATTTAATGAATATATTTGA+TGG + chr8_2:35591226-35591245 Msa1245480:CDS 15.0%
!!! TTTTTTTTCACTGATTGAAT+TGG - chr8_2:35586194-35586213 None:intergenic 20.0%
!! AATTCAATCAGTGAAAAAAA+AGG + chr8_2:35586193-35586212 Msa1245480:CDS 20.0%
!! ATTCAATCAGTGAAAAAAAA+GGG + chr8_2:35586194-35586213 Msa1245480:CDS 20.0%
!! AGATTCTGATTAACTTAATT+TGG + chr8_2:35587171-35587190 Msa1245480:intron 20.0%
!! TTTGGTTATTATGTTGATAT+AGG + chr8_2:35587189-35587208 Msa1245480:intron 20.0%
!!! TAATTTTACCGGAAAATTTA+AGG - chr8_2:35587289-35587308 None:intergenic 20.0%
!! AATTGGTCAATAAAAGTAAA+TGG + chr8_2:35587322-35587341 Msa1245480:intron 20.0%
!! TTGTTGAAAATTTCAAACAT+TGG - chr8_2:35587472-35587491 None:intergenic 20.0%
!! TCAACAATAACATTAATACA+TGG + chr8_2:35587485-35587504 Msa1245480:intron 20.0%
!! CTAAAAAATAGTTCAAAGAA+GGG - chr8_2:35587580-35587599 None:intergenic 20.0%
!! TCTAAAAAATAGTTCAAAGA+AGG - chr8_2:35587581-35587600 None:intergenic 20.0%
!!! GAATATTATTGACTATTAGA+CGG - chr8_2:35587658-35587677 None:intergenic 20.0%
!! TTCTATGGAAAAAATTAGTT+AGG - chr8_2:35587721-35587740 None:intergenic 20.0%
!! ATAATATTATGTACATGACT+TGG + chr8_2:35588525-35588544 Msa1245480:intron 20.0%
!!! CAAAAATTGTTTCAAACTTT+TGG + chr8_2:35588748-35588767 Msa1245480:intron 20.0%
!! TACTATCATAGTTTGATATT+GGG - chr8_2:35589589-35589608 None:intergenic 20.0%
!! ACAAAAAAAATATTGTTGAC+AGG - chr8_2:35589612-35589631 None:intergenic 20.0%
!! TTGTTTATAGTAACATTGTA+CGG - chr8_2:35590358-35590377 None:intergenic 20.0%
!! CATATATTTAACCATGAATT+TGG - chr8_2:35590678-35590697 None:intergenic 20.0%
!!! TTGACATTGAGATTCTTTTT+TGG - chr8_2:35586230-35586249 None:intergenic 25.0%
! TTGATCAAATTAGACATAGA+TGG + chr8_2:35586445-35586464 Msa1245480:intron 25.0%
!! ACTATGTTTTCTTTAGTGTT+TGG + chr8_2:35586549-35586568 Msa1245480:intron 25.0%
!!! AAAAATAAGAAGCATCTAGT+TGG + chr8_2:35587363-35587382 Msa1245480:intron 25.0%
! GTCATTTCAAATAATTTCCA+AGG + chr8_2:35587415-35587434 Msa1245480:intron 25.0%
! ATATAATGATTCTTTGAACC+AGG - chr8_2:35587512-35587531 None:intergenic 25.0%
! ATAGTCAATAATATTCGTTG+AGG + chr8_2:35587662-35587681 Msa1245480:intron 25.0%
! AATTTATGAGACACAAAAAG+TGG + chr8_2:35587685-35587704 Msa1245480:intron 25.0%
! ATTTATGAGACACAAAAAGT+GGG + chr8_2:35587686-35587705 Msa1245480:intron 25.0%
! ATGAATATGTTACTAACTTG+TGG + chr8_2:35587904-35587923 Msa1245480:intron 25.0%
! AAATTTGAATGTATCTAACC+TGG - chr8_2:35588064-35588083 None:intergenic 25.0%
! TACATGTTTGATATCACATT+AGG + chr8_2:35588226-35588245 Msa1245480:intron 25.0%
!!! TGTAGTTTTTTGCAAAATCA+AGG - chr8_2:35588275-35588294 None:intergenic 25.0%
! ATGATTCATGTTTGATATCA+CGG - chr8_2:35588344-35588363 None:intergenic 25.0%
!!! AAAATGGTAATGGTACAAAT+TGG - chr8_2:35588384-35588403 None:intergenic 25.0%
!! TACCATTACCATTTTATCAA+TGG + chr8_2:35588389-35588408 Msa1245480:intron 25.0%
! TTTAGTGTAATTATAGGTGT+TGG + chr8_2:35589008-35589027 Msa1245480:intron 25.0%
!!! TAGTTTTACAAGCTGTAATT+TGG - chr8_2:35589229-35589248 None:intergenic 25.0%
! TTCTCATAATTAACGTGAAT+TGG + chr8_2:35589252-35589271 Msa1245480:intron 25.0%
! TCTCATAATTAACGTGAATT+GGG + chr8_2:35589253-35589272 Msa1245480:intron 25.0%
!! TAAATTTTCCTATGTTCCTA+TGG - chr8_2:35589397-35589416 None:intergenic 25.0%
! GTACTATCATAGTTTGATAT+TGG - chr8_2:35589590-35589609 None:intergenic 25.0%
!!! TATTGTATTATTTTGCCATG+TGG + chr8_2:35589851-35589870 Msa1245480:intron 25.0%
! TATTATGGTTTCACAAGATT+GGG - chr8_2:35590043-35590062 None:intergenic 25.0%
! TTATTATGGTTTCACAAGAT+TGG - chr8_2:35590044-35590063 None:intergenic 25.0%
! GTAGTTGCTTATATCAAAAT+TGG - chr8_2:35590882-35590901 None:intergenic 25.0%
!! TTTTGATATAAGCAACTACA+TGG + chr8_2:35590883-35590902 Msa1245480:CDS 25.0%
!!! ATTTGTAGTTGATTTTCTTG+TGG - chr8_2:35591034-35591053 None:intergenic 25.0%
! ATGCGCAATAGTTAATATTA+TGG + chr8_2:35591105-35591124 Msa1245480:CDS 25.0%
! ATTTGAACTTATGTTCAACA+CGG + chr8_2:35591273-35591292 Msa1245480:CDS 25.0%
TCATCATCTTCATCTTCTAT+TGG + chr8_2:35586158-35586177 Msa1245480:CDS 30.0%
CAGAAGAAAAACCAAACAAA+TGG + chr8_2:35586266-35586285 Msa1245480:CDS 30.0%
AAGAAAAACCAAACAAATGG+TGG + chr8_2:35586269-35586288 Msa1245480:CDS 30.0%
! ACCCTTTTGAATTTTGTTGA+TGG + chr8_2:35586387-35586406 Msa1245480:intron 30.0%
CCCATCAACAAAATTCAAAA+GGG - chr8_2:35586391-35586410 None:intergenic 30.0%
! CCCTTTTGAATTTTGTTGAT+GGG + chr8_2:35586388-35586407 Msa1245480:intron 30.0%
ACCCATCAACAAAATTCAAA+AGG - chr8_2:35586392-35586411 None:intergenic 30.0%
! AAGATTTGAAGCTCATCTAT+GGG + chr8_2:35586473-35586492 Msa1245480:CDS 30.0%
AACAAGATTCAGAACAAGAA+GGG + chr8_2:35586510-35586529 Msa1245480:CDS 30.0%
!!! TGCTTCATAGATGAGTTTTT+TGG + chr8_2:35586760-35586779 Msa1245480:intron 30.0%
! AATGGAGTCCTATATTGTTT+TGG + chr8_2:35587340-35587359 Msa1245480:intron 30.0%
GTTAAATTAGTCCTTGATCA+TGG - chr8_2:35587450-35587469 None:intergenic 30.0%
ATAACATTAATACATGGACC+TGG + chr8_2:35587491-35587510 Msa1245480:intron 30.0%
TGGAAAAAATTAGTTAGGAG+AGG - chr8_2:35587716-35587735 None:intergenic 30.0%
ATTCCTTAAATAGACGATCA+GGG - chr8_2:35587750-35587769 None:intergenic 30.0%
AATTCCTTAAATAGACGATC+AGG - chr8_2:35587751-35587770 None:intergenic 30.0%
AATTCAAATCTCTTACCACT+TGG + chr8_2:35587767-35587786 Msa1245480:intron 30.0%
GACATGTACCAATGATATAT+TGG - chr8_2:35587794-35587813 None:intergenic 30.0%
ATAGATGCATCTATCTTACA+TGG - chr8_2:35587816-35587835 None:intergenic 30.0%
AACTTATGCAAAAGAGTTTG+AGG + chr8_2:35587945-35587964 Msa1245480:CDS 30.0%
! GTTCAAATACTCTTCTTTTG+AGG - chr8_2:35587983-35588002 None:intergenic 30.0%
!! AAGAGTATTTGAACTCTTTG+CGG + chr8_2:35587989-35588008 Msa1245480:CDS 30.0%
!!! TCTAGCATTTTTTGAAACCA+TGG + chr8_2:35588122-35588141 Msa1245480:intron 30.0%
TTTCATACATGTGTGATTAG+AGG + chr8_2:35588198-35588217 Msa1245480:intron 30.0%
GACCATTGATAAAATGGTAA+TGG - chr8_2:35588394-35588413 None:intergenic 30.0%
AACTTGGACCATTGATAAAA+TGG - chr8_2:35588400-35588419 None:intergenic 30.0%
ACTTGACTATGGTTATAACT+TGG - chr8_2:35588416-35588435 None:intergenic 30.0%
AACAACAAACAACTTGACTA+TGG - chr8_2:35588427-35588446 None:intergenic 30.0%
! AATTGTACTTTTCCTGCTTA+TGG - chr8_2:35588851-35588870 None:intergenic 30.0%
TACCATTCTCTAATTTCTCT+AGG - chr8_2:35588925-35588944 None:intergenic 30.0%
TATTAGACATGTTTCAGTGT+CGG - chr8_2:35589053-35589072 None:intergenic 30.0%
ACACTGAAACATGTCTAATA+TGG + chr8_2:35589053-35589072 Msa1245480:intron 30.0%
CACTGAAACATGTCTAATAT+GGG + chr8_2:35589054-35589073 Msa1245480:intron 30.0%
ACTGAAACATGTCTAATATG+GGG + chr8_2:35589055-35589074 Msa1245480:intron 30.0%
GTAAAAGACAAAAATGCACT+TGG + chr8_2:35589160-35589179 Msa1245480:intron 30.0%
TATATTTCTTCTGCAACAAG+AGG - chr8_2:35589350-35589369 None:intergenic 30.0%
TATACTACTGCATCAATTTC+TGG + chr8_2:35589366-35589385 Msa1245480:intron 30.0%
!!! TCATGCAGTATTTGTTTTGT+TGG + chr8_2:35589874-35589893 Msa1245480:intron 30.0%
GTCAAATGTTAGATTGAACT+TGG - chr8_2:35589900-35589919 None:intergenic 30.0%
TGCTTATCTTATAGGGTTTA+AGG - chr8_2:35589930-35589949 None:intergenic 30.0%
TCCAACATGCTTATCTTATA+GGG - chr8_2:35589937-35589956 None:intergenic 30.0%
TATAAGATAAGCATGTTGGA+GGG + chr8_2:35589937-35589956 Msa1245480:intron 30.0%
! ATAATTTTTGACCGACATGT+TGG - chr8_2:35590008-35590027 None:intergenic 30.0%
ATATTTGAAGAATCAGTGTC+TGG - chr8_2:35590223-35590242 None:intergenic 30.0%
AATATACAAATGTGTCACCA+AGG + chr8_2:35590441-35590460 Msa1245480:intron 30.0%
TATTGAAGAAACTCAAGAAG+AGG + chr8_2:35590802-35590821 Msa1245480:intron 30.0%
GCTTATATCAAAATTGGTCA+CGG - chr8_2:35590876-35590895 None:intergenic 30.0%
ACAATTTCTGTGTTTGATTG+TGG - chr8_2:35590953-35590972 None:intergenic 30.0%
GGTGAAAGTGATATCAATAT+CGG + chr8_2:35591316-35591335 Msa1245480:CDS 30.0%
! TATCAATATCGGTGAAGTTT+TGG + chr8_2:35591327-35591346 Msa1245480:CDS 30.0%
GGATTATTAAATCAAGATGC+CGG + chr8_2:35591370-35591389 Msa1245480:CDS 30.0%
GAAGATGATGAACTTGAAGA+TGG - chr8_2:35586149-35586168 None:intergenic 35.0%
CAAATTAGACATAGATGGAC+TGG + chr8_2:35586450-35586469 Msa1245480:intron 35.0%
! GAAGATTTGAAGCTCATCTA+TGG + chr8_2:35586472-35586491 Msa1245480:CDS 35.0%
ATCTATGGGATAAGACTTCT+TGG + chr8_2:35586487-35586506 Msa1245480:CDS 35.0%
GAACAAGATTCAGAACAAGA+AGG + chr8_2:35586509-35586528 Msa1245480:CDS 35.0%
TGATGAGTTTCTATGAAGCA+CGG + chr8_2:35586580-35586599 Msa1245480:intron 35.0%
AGACAAGTCAGAGAAAATCA+AGG + chr8_2:35586875-35586894 Msa1245480:intron 35.0%
! TGCGGATGGTTTAGTTTATT+TGG + chr8_2:35587030-35587049 Msa1245480:intron 35.0%
! GCGGATGGTTTAGTTTATTT+GGG + chr8_2:35587031-35587050 Msa1245480:intron 35.0%
! CGATGCAACCTTAAATTTTC+CGG + chr8_2:35587278-35587297 Msa1245480:CDS 35.0%
GATCATGGCTAAAATAACCT+TGG - chr8_2:35587435-35587454 None:intergenic 35.0%
!!! GGTTATTTTAGCCATGATCA+AGG + chr8_2:35587436-35587455 Msa1245480:intron 35.0%
! ATAGTTCAAAGAAGGGTATG+TGG - chr8_2:35587573-35587592 None:intergenic 35.0%
TTCCTTAAATAGACGATCAG+GGG - chr8_2:35587749-35587768 None:intergenic 35.0%
CAATGATATATTGGTCCAAG+TGG - chr8_2:35587785-35587804 None:intergenic 35.0%
CACTTGGACCAATATATCAT+TGG + chr8_2:35587783-35587802 Msa1245480:intron 35.0%
TGCAAAAGAGTTTGAGGAAA+TGG + chr8_2:35587951-35587970 Msa1245480:CDS 35.0%
! TGACACTTTTGCAAGTATCT+GGG + chr8_2:35588453-35588472 Msa1245480:intron 35.0%
TTGAATAGGCATCACCATAA+TGG + chr8_2:35588625-35588644 Msa1245480:intron 35.0%
TGGTAACAAGTACCTCTATT+TGG + chr8_2:35588678-35588697 Msa1245480:CDS 35.0%
GGTAACAAGTACCTCTATTT+GGG + chr8_2:35588679-35588698 Msa1245480:CDS 35.0%
CGTGACATCTTTATTAAGCA+TGG - chr8_2:35588807-35588826 None:intergenic 35.0%
TGCTTAATAAAGATGTCACG+TGG + chr8_2:35588807-35588826 Msa1245480:intron 35.0%
ACATTTGACAATCCATAAGC+AGG + chr8_2:35588836-35588855 Msa1245480:intron 35.0%
AGGAAATTAGTACTTTGCAG+AGG - chr8_2:35588877-35588896 None:intergenic 35.0%
!! GTAATTATAGGTGTTGGTGT+CGG + chr8_2:35589014-35589033 Msa1245480:intron 35.0%
! TGGGTTAAAGCTGGAATTTT+AGG + chr8_2:35589272-35589291 Msa1245480:intron 35.0%
!! TAGATTTTAACCTTTGCAGC+TGG - chr8_2:35589426-35589445 None:intergenic 35.0%
CAATTTCCAGTATTGTTGAC+AGG - chr8_2:35589657-35589676 None:intergenic 35.0%
ACCCTATAAGATAAGCATGT+TGG + chr8_2:35589933-35589952 Msa1245480:intron 35.0%
CTCCAACATGCTTATCTTAT+AGG - chr8_2:35589938-35589957 None:intergenic 35.0%
CTATAAGATAAGCATGTTGG+AGG + chr8_2:35589936-35589955 Msa1245480:intron 35.0%
ATTCCAAATCCATCTAACCT+TGG - chr8_2:35590461-35590480 None:intergenic 35.0%
AGACATGAATCGAGATTAGA+TGG + chr8_2:35590525-35590544 Msa1245480:intron 35.0%
ATCTTATGCACTTATGCACT+CGG - chr8_2:35590639-35590658 None:intergenic 35.0%
CAACTACATGGACAAATTGA+AGG + chr8_2:35590895-35590914 Msa1245480:CDS 35.0%
TTGTTCTTCCAATGCTTCTT+CGG - chr8_2:35590993-35591012 None:intergenic 35.0%
!! TGTAGTTGATTTTCTTGTGG+AGG - chr8_2:35591031-35591050 None:intergenic 35.0%
!! GTTTTGACCAAGATTATCCA+TGG + chr8_2:35591134-35591153 Msa1245480:CDS 35.0%
!!! AATATCGGTGAAGTTTTGGA+GGG + chr8_2:35591331-35591350 Msa1245480:CDS 35.0%
TGAGAATAGTAACAAGGAGA+AGG + chr8_2:35591408-35591427 Msa1245480:CDS 35.0%
GGAAGAAGAAGAAGAATCTA+AGG - chr8_2:35591443-35591462 None:intergenic 35.0%
GATGATGAACTTGAAGATGG+TGG - chr8_2:35586146-35586165 None:intergenic 40.0%
TTCTACTGCCACCATTTGTT+TGG - chr8_2:35586280-35586299 None:intergenic 40.0%
AGAAGAAGCTCCATTTACAG+AGG + chr8_2:35586296-35586315 Msa1245480:CDS 40.0%
CCTTGTAACTCCTCTGTAAA+TGG - chr8_2:35586309-35586328 None:intergenic 40.0%
CCATTTACAGAGGAGTTACA+AGG + chr8_2:35586306-35586325 Msa1245480:CDS 40.0%
CAGAACAAGAAGGGAAAACA+AGG + chr8_2:35586519-35586538 Msa1245480:CDS 40.0%
ATTAATGTCCGTGTCGTATC+TGG - chr8_2:35586621-35586640 None:intergenic 40.0%
! TGTAATCATAGGTGTCGTGT+CGG + chr8_2:35586683-35586702 Msa1245480:intron 40.0%
ACTCATTGGATTAAGCGTGT+GGG - chr8_2:35586735-35586754 None:intergenic 40.0%
TATGAAGCAGAGACACTCAT+TGG - chr8_2:35586749-35586768 None:intergenic 40.0%
ATCTTGCAGCACTCAAGTAT+TGG + chr8_2:35587250-35587269 Msa1245480:CDS 40.0%
TCTTGCAGCACTCAAGTATT+GGG + chr8_2:35587251-35587270 Msa1245480:CDS 40.0%
CGATCAGGGGTTTAATTCTA+TGG - chr8_2:35587736-35587755 None:intergenic 40.0%
AACCCCTGATCGTCTATTTA+AGG + chr8_2:35587744-35587763 Msa1245480:intron 40.0%
AGTATTTGAACTCTTTGCGG+CGG + chr8_2:35587992-35588011 Msa1245480:CDS 40.0%
! CAAAGCAGTGGTTTTTCTAG+AGG + chr8_2:35588015-35588034 Msa1245480:CDS 40.0%
AGAGGACTTTCTAAATACCG+TGG + chr8_2:35588033-35588052 Msa1245480:CDS 40.0%
GAGGACTTTCTAAATACCGT+GGG + chr8_2:35588034-35588053 Msa1245480:CDS 40.0%
AGGACTTTCTAAATACCGTG+GGG + chr8_2:35588035-35588054 Msa1245480:CDS 40.0%
GTATGAAATGCACGTGTAGT+CGG - chr8_2:35588186-35588205 None:intergenic 40.0%
! GTGACACTTTTGCAAGTATC+TGG + chr8_2:35588452-35588471 Msa1245480:intron 40.0%
ATAGGCATCACCATAATGGT+CGG + chr8_2:35588629-35588648 Msa1245480:intron 40.0%
TACTGTATGTGCCCAAATAG+AGG - chr8_2:35588693-35588712 None:intergenic 40.0%
CTAATTTCTCTAGGCCTTTG+TGG - chr8_2:35588916-35588935 None:intergenic 40.0%
GGCCTAGAGAAATTAGAGAA+TGG + chr8_2:35588920-35588939 Msa1245480:intron 40.0%
AACGTGAATTGGGTTAAAGC+TGG + chr8_2:35589263-35589282 Msa1245480:intron 40.0%
!! TCAATTTCTGGTCTCACCAT+AGG + chr8_2:35589378-35589397 Msa1245480:intron 40.0%
TTTAATACAGCCAGCTGCAA+AGG + chr8_2:35589413-35589432 Msa1245480:intron 40.0%
! GAAGTACCTGTCAACAATAC+TGG + chr8_2:35589648-35589667 Msa1245480:intron 40.0%
ACAAATACTGCATGACCACA+TGG - chr8_2:35589869-35589888 None:intergenic 40.0%
GATAGATACTGCATGAGTCA+AGG - chr8_2:35589973-35589992 None:intergenic 40.0%
ATCACTATTCACGTGCTTAC+TGG - chr8_2:35590200-35590219 None:intergenic 40.0%
AATGTGTCACCAAGGTTAGA+TGG + chr8_2:35590449-35590468 Msa1245480:intron 40.0%
! TCACCAAGGTTAGATGGATT+TGG + chr8_2:35590455-35590474 Msa1245480:intron 40.0%
CATTCATGCAATCGACACAT+CGG + chr8_2:35590502-35590521 Msa1245480:intron 40.0%
!! CCATGAATTTGGCTTGTATG+TGG - chr8_2:35590667-35590686 None:intergenic 40.0%
CCACATACAAGCCAAATTCA+TGG + chr8_2:35590664-35590683 Msa1245480:intron 40.0%
CTACATGGACAAATTGAAGG+TGG + chr8_2:35590898-35590917 Msa1245480:CDS 40.0%
!! AGTTGATTTTCTTGTGGAGG+CGG - chr8_2:35591028-35591047 None:intergenic 40.0%
TGTTGAAATTGTTGCTGCGA+AGG - chr8_2:35591061-35591080 None:intergenic 40.0%
ATTGCGCATTCATGACTAGT+TGG - chr8_2:35591094-35591113 None:intergenic 40.0%
TGAAGCTCCATGGATAATCT+TGG - chr8_2:35591144-35591163 None:intergenic 40.0%
CCATTATACATGAAGCTCCA+TGG - chr8_2:35591154-35591173 None:intergenic 40.0%
CCATGGAGCTTCATGTATAA+TGG + chr8_2:35591151-35591170 Msa1245480:CDS 40.0%
TTGTCAGAGTTTCAAGACAC+AGG + chr8_2:35591175-35591194 Msa1245480:CDS 40.0%
!! CAATATCGGTGAAGTTTTGG+AGG + chr8_2:35591330-35591349 Msa1245480:CDS 40.0%
!! TTGGAGGGTATTGATCTTTG+TGG + chr8_2:35591346-35591365 Msa1245480:CDS 40.0%
AAATCAAGATGCCGGAGATA+TGG + chr8_2:35591378-35591397 Msa1245480:CDS 40.0%
TGCGGATGAGAATAGTAACA+AGG + chr8_2:35591402-35591421 Msa1245480:CDS 40.0%
TGTAGTGGTTGAAGATGATG+GGG - chr8_2:35591464-35591483 None:intergenic 40.0%
CTGTAGTGGTTGAAGATGAT+GGG - chr8_2:35591465-35591484 None:intergenic 40.0%
ACTGTAGTGGTTGAAGATGA+TGG - chr8_2:35591466-35591485 None:intergenic 40.0%
GTTTCTATGAAGCACGGACA+AGG + chr8_2:35586586-35586605 Msa1245480:intron 45.0%
CACGTATACCAGATACGACA+CGG + chr8_2:35586610-35586629 Msa1245480:intron 45.0%
CACTCATTGGATTAAGCGTG+TGG - chr8_2:35586736-35586755 None:intergenic 45.0%
GCAACGTTCACAATCACTTG+CGG + chr8_2:35587012-35587031 Msa1245480:intron 45.0%
! CTTGAGTGCTGCAAGATCAT+AGG - chr8_2:35587247-35587266 None:intergenic 45.0%
! CTTGCAGCACTCAAGTATTG+GGG + chr8_2:35587252-35587271 Msa1245480:CDS 45.0%
!! TTGCAGCACTCAAGTATTGG+GGG + chr8_2:35587253-35587272 Msa1245480:CDS 45.0%
! TTTGAGACACAGTTGCACCA+TGG - chr8_2:35588142-35588161 None:intergenic 45.0%
GGTGCAACTGTGTCTCAAAA+CGG + chr8_2:35588143-35588162 Msa1245480:intron 45.0%
ACTGTGTCTCAAAACGGATC+CGG + chr8_2:35588149-35588168 Msa1245480:intron 45.0%
! GTGGACTGTGGACACAAATT+AGG - chr8_2:35588897-35588916 None:intergenic 45.0%
TTTGTGTCCACAGTCCACAA+AGG + chr8_2:35588899-35588918 Msa1245480:intron 45.0%
! GTTAGCATCCGTGTCTTGTT+CGG - chr8_2:35588960-35588979 None:intergenic 45.0%
TGGTCTCACCATAGGAACAT+AGG + chr8_2:35589386-35589405 Msa1245480:intron 45.0%
! TTTTGACCGACATGTTGGCA+GGG - chr8_2:35590003-35590022 None:intergenic 45.0%
! TTTTTGACCGACATGTTGGC+AGG - chr8_2:35590004-35590023 None:intergenic 45.0%
TGCTTACTGGATACTTGGGT+GGG - chr8_2:35590187-35590206 None:intergenic 45.0%
CACGTGCTTACTGGATACTT+GGG - chr8_2:35590191-35590210 None:intergenic 45.0%
TCACGTGCTTACTGGATACT+TGG - chr8_2:35590192-35590211 None:intergenic 45.0%
ATGGCAGCAATAAAGCACAG+AGG + chr8_2:35590842-35590861 Msa1245480:CDS 45.0%
CAATGCTTCTTCGGAATCAG+GGG - chr8_2:35590984-35591003 None:intergenic 45.0%
CCAATGCTTCTTCGGAATCA+GGG - chr8_2:35590985-35591004 None:intergenic 45.0%
TCCAATGCTTCTTCGGAATC+AGG - chr8_2:35590986-35591005 None:intergenic 45.0%
! TTGATTTTCTTGTGGAGGCG+GGG - chr8_2:35591026-35591045 None:intergenic 45.0%
!! GTTGATTTTCTTGTGGAGGC+GGG - chr8_2:35591027-35591046 None:intergenic 45.0%
GGTTCGACTATGAGTAAGTG+TGG + chr8_2:35591196-35591215 Msa1245480:CDS 45.0%
TTCAACACGGAAGAACCTTG+TGG + chr8_2:35591286-35591305 Msa1245480:CDS 45.0%
!! GAGGGTATTGATCTTTGTGG+AGG + chr8_2:35591349-35591368 Msa1245480:CDS 45.0%
!!! TTTGATTTTAATTATTTTAA+TGG + chr8_2:35586938-35586957 Msa1245480:intron 5.0%
!!! TATAATTTTTTTAGATTTTA+AGG - chr8_2:35589798-35589817 None:intergenic 5.0%
CGTTCACAATCACTTGCGGA+TGG + chr8_2:35587016-35587035 Msa1245480:intron 50.0%
TATCTAACCTGGCAACCCCA+CGG - chr8_2:35588053-35588072 None:intergenic 50.0%
GCATCACCATAATGGTCGGT+GGG + chr8_2:35588633-35588652 Msa1245480:CDS 50.0%
CACTGACACCGAACAAGACA+CGG + chr8_2:35588949-35588968 Msa1245480:intron 50.0%
CAACCAGCACAACTCACACA+TGG - chr8_2:35589300-35589319 None:intergenic 50.0%
ACAATCCCCTGCCAACATGT+CGG + chr8_2:35589994-35590013 Msa1245480:intron 50.0%
TTTGACCGACATGTTGGCAG+GGG - chr8_2:35590002-35590021 None:intergenic 50.0%
CTTACTGGATACTTGGGTGG+GGG - chr8_2:35590185-35590204 None:intergenic 50.0%
GCTTACTGGATACTTGGGTG+GGG - chr8_2:35590186-35590205 None:intergenic 50.0%
GTGCTTACTGGATACTTGGG+TGG - chr8_2:35590188-35590207 None:intergenic 50.0%
TTATGCACTCGGCACATTGG+TGG - chr8_2:35590628-35590647 None:intergenic 50.0%
CACTTATGCACTCGGCACAT+TGG - chr8_2:35590631-35590650 None:intergenic 50.0%
AACTCAAGAAGAGGCAGCAG+TGG + chr8_2:35590811-35590830 Msa1245480:CDS 50.0%
GGCAGCAGTGGCTTATGATA+TGG + chr8_2:35590823-35590842 Msa1245480:CDS 50.0%
! CCCTGATTCCGAAGAAGCAT+TGG + chr8_2:35590982-35591001 Msa1245480:CDS 50.0%
! GCGCATTCATGACTAGTTGG+AGG - chr8_2:35591091-35591110 None:intergenic 50.0%
AACACGGAAGAACCTTGTGG+TGG + chr8_2:35591289-35591308 Msa1245480:CDS 50.0%
AGATGCCGGAGATATGGTTG+CGG + chr8_2:35591384-35591403 Msa1245480:CDS 50.0%
CTCATCCGCAACCATATCTC+CGG - chr8_2:35591392-35591411 None:intergenic 50.0%
! CATAGGTGTCGTGTCGGTGT+TGG + chr8_2:35586689-35586708 Msa1245480:intron 55.0%
CTAAATACCGTGGGGTTGCC+AGG + chr8_2:35588043-35588062 Msa1245480:CDS 55.0%
GTAGTCGGCTGCAGACAATC+CGG - chr8_2:35588171-35588190 None:intergenic 55.0%
GGCATCACCATAATGGTCGG+TGG + chr8_2:35588632-35588651 Msa1245480:intron 55.0%
GAGCTTCCCACCGACCATTA+TGG - chr8_2:35588642-35588661 None:intergenic 55.0%
GCTCGCATTGGAAGAGTTCG+TGG + chr8_2:35588658-35588677 Msa1245480:CDS 55.0%
! CTCTAGGCCTTTGTGGACTG+TGG - chr8_2:35588909-35588928 None:intergenic 55.0%
GCTCCATGTGTGAGTTGTGC+TGG + chr8_2:35589294-35589313 Msa1245480:intron 55.0%
GAAGAACCTTGTGGTGGTCG+TGG + chr8_2:35591295-35591314 Msa1245480:CDS 55.0%
CTTTCACCACGACCACCACA+AGG - chr8_2:35591304-35591323 None:intergenic 55.0%
TAAGCGTGTGGGACACGCGT+AGG - chr8_2:35586724-35586743 None:intergenic 60.0%
TCTTTGCGGCGGCAAAGCAG+TGG + chr8_2:35588003-35588022 Msa1245480:CDS 60.0%
GGTCGGTGGGAAGCTCGCAT+TGG + chr8_2:35588646-35588665 Msa1245480:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 35586131 35591495 35586131 ID=Msa1245480;Name=Msa1245480
chr8_2 mRNA 35586131 35591495 35586131 ID=Msa1245480-mRNA-1;Parent=Msa1245480;Name=Msa1245480-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0.2|0|1|1|1|6|0|418
chr8_2 exon 35586131 35586327 35586131 ID=Msa1245480-mRNA-1:exon:11283;Parent=Msa1245480-mRNA-1
chr8_2 exon 35586458 35586540 35586458 ID=Msa1245480-mRNA-1:exon:11284;Parent=Msa1245480-mRNA-1
chr8_2 exon 35587211 35587299 35587211 ID=Msa1245480-mRNA-1:exon:11285;Parent=Msa1245480-mRNA-1
chr8_2 exon 35587940 35588064 35587940 ID=Msa1245480-mRNA-1:exon:11286;Parent=Msa1245480-mRNA-1
chr8_2 exon 35588633 35588709 35588633 ID=Msa1245480-mRNA-1:exon:11287;Parent=Msa1245480-mRNA-1
chr8_2 exon 35590810 35591495 35590810 ID=Msa1245480-mRNA-1:exon:11288;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35586131 35586327 35586131 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35586458 35586540 35586458 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35587211 35587299 35587211 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35587940 35588064 35587940 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35588633 35588709 35588633 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
chr8_2 CDS 35590810 35591495 35590810 ID=Msa1245480-mRNA-1:cds;Parent=Msa1245480-mRNA-1
Gene Sequence

>Msa1245480

ATGAAGAGGTCTCCACCATCTTCAAGTTCATCATCTTCATCTTCTATTGGATTCGAGAATCCAATTCAATCAGTGAAAAAAAAGGGTGCTAAGAATCCAAAAAAGAATCTCAATGTCAAATCACAGAATTTAAAGCAGAAGAAAAACCAAACAAATGGTGGCAGTAGAAGAAGCTCCATTTACAGAGGAGTTACAAGACATAGATGGACTGGAAGATTTGAAGCTCATCTATGGGATAAGACTTCTTGGAACAAGATTCAGAACAAGAAGGGAAAACAAGGTGCTTATGATACTGAAGAAGCAGCAGCTCGTACCTATGATCTTGCAGCACTCAAGTATTGGGGGAACGATGCAACCTTAAATTTTCCGATAGAAACTTATGCAAAAGAGTTTGAGGAAATGGACAAAGCCTCAAAAGAAGAGTATTTGAACTCTTTGCGGCGGCAAAGCAGTGGTTTTTCTAGAGGACTTTCTAAATACCGTGGGGTTGCCAGGCATCACCATAATGGTCGGTGGGAAGCTCGCATTGGAAGAGTTCGTGGTAACAAGTACCTCTATTTGGGCACATACAAAACTCAAGAAGAGGCAGCAGTGGCTTATGATATGGCAGCAATAAAGCACAGAGGAATCAATGCCGTGACCAATTTTGATATAAGCAACTACATGGACAAATTGAAGGTGGAGAAAAATGATGAAACAGAACAAACAAAACCACAATCAAACACAGAAATTGTTGCTAATTCCCCTGATTCCGAAGAAGCATTGGAAGAACAAACAACAACTACCCCGCCTCCACAAGAAAATCAACTACAAATAGAACCTTCGCAGCAACAATTTCAACAACATGTTCCTCCAACTAGTCATGAATGCGCAATAGTTAATATTATGGATCATTGTTTTGACCAAGATTATCCATGGAGCTTCATGTATAATGGATTGTCAGAGTTTCAAGACACAGGTTCGACTATGAGTAAGTGTGGTGATGATGATTTAATGAATATATTTGATGGCTCAAGCTTTGATGATAACATTGAATTTGAACTTATGTTCAACACGGAAGAACCTTGTGGTGGTCGTGGTGAAAGTGATATCAATATCGGTGAAGTTTTGGAGGGTATTGATCTTTGTGGAGGATTATTAAATCAAGATGCCGGAGATATGGTTGCGGATGAGAATAGTAACAAGGAGAAGGATTTATTATCCTTAGATTCTTCTTCTTCTTCCCCATCATCTTCAACCACTACAGTTTCTTTGTAA
Protein sequence

>Msa1245480

MKRSPPSSSSSSSSSIGFENPIQSVKKKGAKNPKKNLNVKSQNLKQKKNQTNGGSRRSSIYRGVTRHRWTGRFEAHLWDKTSWNKIQNKKGKQGAYDTEEAAARTYDLAALKYWGNDATLNFPIETYAKEFEEMDKASKEEYLNSLRRQSSGFSRGLSKYRGVARHHHNGRWEARIGRVRGNKYLYLGTYKTQEEAAVAYDMAAIKHRGINAVTNFDISNYMDKLKVEKNDETEQTKPQSNTEIVANSPDSEEALEEQTTTTPPPQENQLQIEPSQQQFQQHVPPTSHECAIVNIMDHCFDQDYPWSFMYNGLSEFQDTGSTMSKCGDDDLMNIFDGSSFDDNIEFELMFNTEEPCGGRGESDINIGEVLEGIDLCGGLLNQDAGDMVADENSNKEKDLLSLDSSSSSPSSSTTTVSL*