Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247060 | XP_013445694.1 | 96.552 | 290 | 5 | 3 | 1 | 290 | 1 | 285 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247060 | A0A072U1P4 | 96.552 | 290 | 5 | 3 | 1 | 290 | 1 | 285 | 0.0 | 564 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1247060 | Msa1288320 | 0.867176 | 1.659610e-65 | -8.615850e-47 |
| Msa1018020 | Msa1247060 | 0.820923 | 5.306344e-53 | -8.615850e-47 |
| Msa0240780 | Msa1247060 | -0.811395 | 7.152654e-51 | -8.615850e-47 |
| Msa1147980 | Msa1247060 | 0.802101 | 6.583252e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247060 | MtrunA17_Chr8g0361661 | 96.207 | 290 | 5 | 4 | 1 | 290 | 1 | 284 | 0.0 | 558 |
| Msa1247060 | MtrunA17_Chr5g0417141 | 73.986 | 296 | 65 | 7 | 1 | 290 | 1 | 290 | 1.79e-125 | 359 |
| Msa1247060 | MtrunA17_Chr1g0208551 | 37.500 | 264 | 140 | 5 | 1 | 257 | 1 | 246 | 1.05e-57 | 186 |
| Msa1247060 | MtrunA17_Chr7g0269921 | 39.037 | 187 | 101 | 5 | 67 | 249 | 17 | 194 | 3.89e-39 | 136 |
| Msa1247060 | MtrunA17_Chr7g0251421 | 35.897 | 195 | 111 | 7 | 68 | 258 | 14 | 198 | 7.27e-38 | 133 |
| Msa1247060 | MtrunA17_Chr1g0194751 | 42.771 | 166 | 88 | 4 | 67 | 227 | 17 | 180 | 5.10e-31 | 115 |
| Msa1247060 | MtrunA17_Chr7g0217321 | 30.286 | 175 | 111 | 4 | 66 | 240 | 31 | 194 | 7.92e-24 | 96.7 |
| Msa1247060 | MtrunA17_Chr1g0181371 | 39.286 | 84 | 43 | 3 | 39 | 120 | 235 | 312 | 3.33e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247060 | AT2G02960.3 | 69.397 | 232 | 63 | 4 | 57 | 286 | 33 | 258 | 1.27e-99 | 293 |
| Msa1247060 | AT2G02960.2 | 69.397 | 232 | 63 | 4 | 57 | 286 | 33 | 258 | 1.27e-99 | 293 |
| Msa1247060 | AT2G02960.6 | 69.397 | 232 | 63 | 4 | 57 | 286 | 33 | 258 | 1.27e-99 | 293 |
| Msa1247060 | AT2G02960.4 | 69.397 | 232 | 63 | 4 | 57 | 286 | 33 | 258 | 1.27e-99 | 293 |
| Msa1247060 | AT2G02960.1 | 69.397 | 232 | 63 | 4 | 57 | 286 | 33 | 258 | 1.27e-99 | 293 |
| Msa1247060 | AT3G47550.3 | 54.392 | 296 | 113 | 7 | 1 | 285 | 1 | 285 | 4.27e-90 | 270 |
| Msa1247060 | AT3G47550.6 | 54.392 | 296 | 113 | 7 | 1 | 285 | 1 | 285 | 4.27e-90 | 270 |
| Msa1247060 | AT1G14260.2 | 59.701 | 268 | 89 | 5 | 4 | 269 | 5 | 255 | 2.28e-86 | 259 |
| Msa1247060 | AT1G14260.1 | 59.701 | 268 | 89 | 5 | 4 | 269 | 5 | 255 | 2.28e-86 | 259 |
| Msa1247060 | AT1G14260.3 | 59.701 | 268 | 89 | 5 | 4 | 269 | 5 | 255 | 2.28e-86 | 259 |
| Msa1247060 | AT5G62460.3 | 70.000 | 240 | 57 | 6 | 57 | 287 | 81 | 314 | 2.52e-86 | 261 |
| Msa1247060 | AT5G62460.1 | 70.000 | 240 | 57 | 6 | 57 | 287 | 68 | 301 | 2.84e-86 | 261 |
| Msa1247060 | AT5G62460.2 | 70.000 | 240 | 57 | 6 | 57 | 287 | 68 | 301 | 2.84e-86 | 261 |
| Msa1247060 | AT3G47550.2 | 54.582 | 251 | 94 | 6 | 1 | 242 | 1 | 240 | 1.71e-77 | 236 |
| Msa1247060 | AT2G02960.5 | 71.812 | 149 | 37 | 2 | 57 | 205 | 33 | 176 | 1.94e-64 | 204 |
| Msa1247060 | AT3G47550.1 | 50.218 | 229 | 94 | 6 | 1 | 220 | 1 | 218 | 3.24e-60 | 191 |
| Msa1247060 | AT2G01275.2 | 38.934 | 244 | 130 | 3 | 1 | 244 | 1 | 225 | 1.75e-53 | 175 |
| Msa1247060 | AT2G01275.4 | 38.934 | 244 | 130 | 3 | 1 | 244 | 1 | 225 | 1.75e-53 | 175 |
| Msa1247060 | AT2G01275.1 | 38.934 | 244 | 130 | 3 | 1 | 244 | 1 | 225 | 1.75e-53 | 175 |
| Msa1247060 | AT2G01275.3 | 38.934 | 244 | 130 | 3 | 1 | 244 | 27 | 251 | 1.94e-53 | 176 |
| Msa1247060 | AT2G01275.5 | 38.934 | 244 | 130 | 3 | 1 | 244 | 27 | 251 | 1.94e-53 | 176 |
| Msa1247060 | AT5G38070.1 | 36.255 | 251 | 137 | 5 | 1 | 251 | 1 | 228 | 4.66e-42 | 145 |
| Msa1247060 | AT4G02075.3 | 36.702 | 188 | 102 | 4 | 64 | 249 | 14 | 186 | 1.10e-33 | 122 |
| Msa1247060 | AT4G02075.1 | 36.702 | 188 | 102 | 4 | 64 | 249 | 14 | 186 | 1.47e-33 | 122 |
| Msa1247060 | AT1G02610.2 | 34.375 | 192 | 119 | 3 | 58 | 249 | 9 | 193 | 5.59e-32 | 117 |
| Msa1247060 | AT1G02610.1 | 34.375 | 192 | 119 | 3 | 58 | 249 | 9 | 193 | 5.82e-32 | 118 |
| Msa1247060 | AT4G02075.2 | 39.024 | 164 | 82 | 4 | 64 | 223 | 14 | 163 | 1.75e-26 | 102 |
| Msa1247060 | AT4G32670.2 | 38.462 | 91 | 49 | 3 | 45 | 132 | 12 | 98 | 1.61e-11 | 65.1 |
| Msa1247060 | AT4G32670.1 | 38.462 | 91 | 49 | 3 | 45 | 132 | 12 | 98 | 1.61e-11 | 65.1 |
Find 113 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATAATAACTTTATTTAT+TGG | 0.168463 | 8_2:-39355753 | Msa1247060:three_prime_UTR |
| TAGTGTTCGGTGGTGGAATT+TGG | 0.173465 | 8_2:+39358673 | None:intergenic |
| GCGCGTGCCTCAAGAGTAAA+AGG | 0.240504 | 8_2:+39356554 | None:intergenic |
| GACAAACTCACCGAAGAAAA+AGG | 0.255964 | 8_2:+39358562 | None:intergenic |
| CATTCACCGGCGGGGCCTTC+GGG | 0.261603 | 8_2:-39358291 | Msa1247060:CDS |
| TCATTCACCGGCGGGGCCTT+CGG | 0.272228 | 8_2:-39358292 | Msa1247060:CDS |
| ATACAAACTACACTTGTTCT+TGG | 0.295160 | 8_2:+39355937 | None:intergenic |
| CAACGCTGGTGCAACGAAAA+AGG | 0.305135 | 8_2:-39357379 | Msa1247060:CDS |
| CATATTCAGCTTCGAAGAAT+TGG | 0.316433 | 8_2:+39356830 | None:intergenic |
| GAAGAAACTACCATTGATAT+AGG | 0.327532 | 8_2:-39357063 | Msa1247060:CDS |
| GTTGCTTTCGTGCTACAATC+TGG | 0.341099 | 8_2:-39356020 | Msa1247060:CDS |
| ATATCAATGGTAGTTTCTTC+AGG | 0.355321 | 8_2:+39357066 | None:intergenic |
| GACACTCTCTGGCACGCCTT+TGG | 0.362869 | 8_2:-39356896 | Msa1247060:CDS |
| GGAGGATGGGATTGATAATC+TGG | 0.364205 | 8_2:-39358178 | Msa1247060:CDS |
| ATCACCGGCGGCATCGGTTC+AGG | 0.365743 | 8_2:+39358315 | None:intergenic |
| CACGGTTGCTGCTGGTGTTA+TGG | 0.367886 | 8_2:+39355974 | None:intergenic |
| TACCTTGCTATATCATGGCT+TGG | 0.375698 | 8_2:-39356338 | Msa1247060:CDS |
| CGCCTGTAGCGGAAGTCTTA+AGG | 0.384567 | 8_2:-39358145 | Msa1247060:intron |
| AAGAAGGGAAGAGAGAGAAT+TGG | 0.386729 | 8_2:+39358615 | None:intergenic |
| TGTTGAGCCAACGGCTCAAC+CGG | 0.390160 | 8_2:+39358354 | None:intergenic |
| AAGTGTAGTTTGTATGGAAA+TGG | 0.400654 | 8_2:-39355929 | Msa1247060:exon |
| AGTGTTCGGTGGTGGAATTT+GGG | 0.403288 | 8_2:+39358674 | None:intergenic |
| ATTGGATTCGGCGTATATAT+AGG | 0.405439 | 8_2:+39358633 | None:intergenic |
| AAGAACAAGTGTAGTTTGTA+TGG | 0.407359 | 8_2:-39355935 | Msa1247060:exon |
| AACATTCTTGCAGCGGAGGC+TGG | 0.408803 | 8_2:-39356918 | Msa1247060:intron |
| CCGGCATCGGTCGCATTAAT+CGG | 0.412341 | 8_2:+39358373 | None:intergenic |
| ACCTTGCTATATCATGGCTT+GGG | 0.419793 | 8_2:-39356337 | Msa1247060:CDS |
| TTAAAATGAAATTAGATTGA+GGG | 0.420346 | 8_2:+39355801 | None:intergenic |
| AGCGGAGGCTGGACACTCTC+TGG | 0.428867 | 8_2:-39356907 | Msa1247060:CDS |
| AAGAAACTACCATTGATATA+GGG | 0.430184 | 8_2:-39357062 | Msa1247060:intron |
| TTGGTGTGGGTGCGGATTCA+CGG | 0.440637 | 8_2:+39355956 | None:intergenic |
| CGATCATGTGGTGTTGTTTG+TGG | 0.446181 | 8_2:-39358397 | Msa1247060:CDS |
| TTTAAAATGAAATTAGATTG+AGG | 0.448859 | 8_2:+39355800 | None:intergenic |
| CCGATTAATGCGACCGATGC+CGG | 0.458371 | 8_2:-39358373 | Msa1247060:CDS |
| TGCGGATTCACGGTTGCTGC+TGG | 0.464087 | 8_2:+39355966 | None:intergenic |
| GGCGGCATCGGTTCAGGAGC+AGG | 0.464476 | 8_2:+39358321 | None:intergenic |
| GGTGGTGGAGCAATATAATC+AGG | 0.464702 | 8_2:+39357099 | None:intergenic |
| GGTTCAGGAGCAGGCTGAGC+CGG | 0.472619 | 8_2:+39358330 | None:intergenic |
| GCTACAATCTGGGCAGCATA+GGG | 0.473645 | 8_2:-39356009 | Msa1247060:CDS |
| ACCGATGCCGGTTGAGCCGT+TGG | 0.474368 | 8_2:-39358361 | Msa1247060:CDS |
| GTTTATAGAGCGAGAAAGAA+GGG | 0.476227 | 8_2:+39358600 | None:intergenic |
| AACATGTGAAATTTGTCATA+AGG | 0.477069 | 8_2:-39357350 | Msa1247060:intron |
| ATTTGGGAACAACGTGGAAA+AGG | 0.477128 | 8_2:+39358690 | None:intergenic |
| CGAGCCGCTGTTGCAGCAGA+TGG | 0.477787 | 8_2:-39358229 | Msa1247060:CDS |
| TGAGCCGTTGGCTCAACATC+CGG | 0.480048 | 8_2:-39358349 | Msa1247060:CDS |
| TCAGGATGTGGACGAGGTGG+TGG | 0.480833 | 8_2:+39357084 | None:intergenic |
| GGTTTATAGAGCGAGAAAGA+AGG | 0.486147 | 8_2:+39358599 | None:intergenic |
| ACAGGAGGCTGCAGCATTGG+CGG | 0.488662 | 8_2:-39356051 | Msa1247060:intron |
| GGCTGAGTGTAGGATTTGTC+AGG | 0.492601 | 8_2:-39358202 | Msa1247060:CDS |
| ATTGTAGCACGAAAGCAACT+TGG | 0.495200 | 8_2:+39356024 | None:intergenic |
| TTCGGGTTCTTCCTCAGCGA+CGG | 0.495394 | 8_2:-39358274 | Msa1247060:CDS |
| AATACAGGAGGCTGCAGCAT+TGG | 0.499752 | 8_2:-39356054 | Msa1247060:intron |
| CTTGCGTGATCCTCGATTGT+TGG | 0.500268 | 8_2:-39356872 | Msa1247060:CDS |
| GTTATATTAGAATTAGAGCC+GGG | 0.500305 | 8_2:+39355847 | None:intergenic |
| AGGATTTGTCAGGAGGAGGA+TGG | 0.500614 | 8_2:-39358192 | Msa1247060:CDS |
| GGAAGAGAGAGAATTGGATT+CGG | 0.501846 | 8_2:+39358621 | None:intergenic |
| TTGCTTTCGTGCTACAATCT+GGG | 0.503156 | 8_2:-39356019 | Msa1247060:CDS |
| TACCTTAAGACTTCCGCTAC+AGG | 0.504196 | 8_2:+39358143 | None:intergenic |
| GGATTTGTCAGGAGGAGGAT+GGG | 0.506006 | 8_2:-39358191 | Msa1247060:CDS |
| ATGGTAGTTTCTTCAGGATG+TGG | 0.506061 | 8_2:+39357072 | None:intergenic |
| ACTTGTTCTTGGTGTGGGTG+CGG | 0.506923 | 8_2:+39355948 | None:intergenic |
| GAATGAATCACCGGCGGCAT+CGG | 0.507695 | 8_2:+39358309 | None:intergenic |
| GAAAGGTTAACGTTAGTGTT+CGG | 0.514852 | 8_2:+39358660 | None:intergenic |
| CCGGTGATTCATTCACCGGC+GGG | 0.516096 | 8_2:-39358300 | Msa1247060:CDS |
| GAGGCACGCGCTTTCTGTCA+CGG | 0.518453 | 8_2:-39356542 | Msa1247060:CDS |
| TTCTTCGAAGCTGAATATGA+TGG | 0.519355 | 8_2:-39356826 | Msa1247060:CDS |
| TTAACGTTAGTGTTCGGTGG+TGG | 0.521659 | 8_2:+39358666 | None:intergenic |
| ATCTCCATCTGCTGCAACAG+CGG | 0.524481 | 8_2:+39358225 | None:intergenic |
| AACTACACTTGTTCTTGGTG+TGG | 0.527387 | 8_2:+39355942 | None:intergenic |
| TTAATCTTACCCTATATCAA+TGG | 0.530350 | 8_2:+39357053 | None:intergenic |
| TGCTCCTGAACCGATGCCGC+CGG | 0.532957 | 8_2:-39358319 | Msa1247060:CDS |
| GCCGCCGGTGATTCATTCAC+CGG | 0.534985 | 8_2:-39358304 | Msa1247060:CDS |
| AACGTGGAAAAGGATATTAT+AGG | 0.536863 | 8_2:+39358700 | None:intergenic |
| AGTTATATTAGAATTAGAGC+CGG | 0.543436 | 8_2:+39355846 | None:intergenic |
| AGCAATATAATCAGGTTCAT+AGG | 0.549152 | 8_2:+39357107 | None:intergenic |
| ATAGAAAGTGCGTCCAACGC+TGG | 0.549813 | 8_2:-39357393 | Msa1247060:CDS |
| TGCTACAATCTGGGCAGCAT+AGG | 0.553716 | 8_2:-39356010 | Msa1247060:CDS |
| ACTACACTTGTTCTTGGTGT+GGG | 0.560807 | 8_2:+39355943 | None:intergenic |
| ACGGCAAAATGCAGCTCCGT+TGG | 0.561312 | 8_2:+39356786 | None:intergenic |
| GCCAACGGCTCAACCGGCAT+CGG | 0.561647 | 8_2:+39358360 | None:intergenic |
| GTTTCTTCAGGATGTGGACG+AGG | 0.562462 | 8_2:+39357078 | None:intergenic |
| GAAGAACCCGAAGGCCCCGC+CGG | 0.568091 | 8_2:+39358285 | None:intergenic |
| AGACTTCCGCTACAGGCGCA+AGG | 0.568684 | 8_2:+39358150 | None:intergenic |
| TTGTAGCACGAAAGCAACTT+GGG | 0.569577 | 8_2:+39356025 | None:intergenic |
| CCCGCCGGTGAATGAATCAC+CGG | 0.578619 | 8_2:+39358300 | None:intergenic |
| GTGTAGGATTTGTCAGGAGG+AGG | 0.581312 | 8_2:-39358196 | Msa1247060:CDS |
| TGAGCCGGATGTTGAGCCAA+CGG | 0.587025 | 8_2:+39358345 | None:intergenic |
| GCTGTTGCAGCAGATGGAGA+TGG | 0.590554 | 8_2:-39358223 | Msa1247060:CDS |
| GCCGGTGATTCATTCACCGG+CGG | 0.593871 | 8_2:-39358301 | Msa1247060:CDS |
| GAGAATCCTTGCGCCTGTAG+CGG | 0.594462 | 8_2:-39358156 | Msa1247060:CDS |
| GCGTATATATAGGAAGAGAA+AGG | 0.598332 | 8_2:+39358643 | None:intergenic |
| ATCGTCATCATCCGTCGCTG+AGG | 0.600354 | 8_2:+39358263 | None:intergenic |
| AGATGGAGATGGCTGAGTGT+AGG | 0.601452 | 8_2:-39358212 | Msa1247060:CDS |
| TCGATTGTTGGCAATTGCAG+AGG | 0.603328 | 8_2:-39356860 | Msa1247060:CDS |
| GCGACGGATGATGACGATGT+CGG | 0.605629 | 8_2:-39358258 | Msa1247060:CDS |
| TTACGATCAGAGCAGCTGAA+CGG | 0.606397 | 8_2:+39356767 | None:intergenic |
| CGCGTGCCTCAAGAGTAAAA+GGG | 0.611961 | 8_2:+39356555 | None:intergenic |
| CGAGGATCACGCAAGTCCAA+AGG | 0.614034 | 8_2:+39356880 | None:intergenic |
| TCTTCAGGATGTGGACGAGG+TGG | 0.627168 | 8_2:+39357081 | None:intergenic |
| AGGTTAACGTTAGTGTTCGG+TGG | 0.627205 | 8_2:+39358663 | None:intergenic |
| GCCCAAGCCATGATATAGCA+AGG | 0.629507 | 8_2:+39356336 | None:intergenic |
| TCTGCAATTGCCAACAATCG+AGG | 0.633472 | 8_2:+39356862 | None:intergenic |
| AATGATGAGCAAGAGTAGCA+TGG | 0.635348 | 8_2:+39355872 | None:intergenic |
| TATGCTGCTTCTAATGCCAA+CGG | 0.637155 | 8_2:-39356802 | Msa1247060:CDS |
| TGAGTGTAGGATTTGTCAGG+AGG | 0.657795 | 8_2:-39358199 | Msa1247060:CDS |
| GTCGCTGAGGAAGAACCCGA+AGG | 0.660296 | 8_2:+39358276 | None:intergenic |
| TGAATCAATGAGCGATCATG+TGG | 0.669095 | 8_2:-39358409 | Msa1247060:exon |
| GCCGGTGAATGAATCACCGG+CGG | 0.674003 | 8_2:+39358303 | None:intergenic |
| GGATGATGACGATGTCGGCG+AGG | 0.685342 | 8_2:-39358253 | Msa1247060:CDS |
| GCAAGGTAAAAGAAAGCCAG+CGG | 0.689230 | 8_2:+39356353 | None:intergenic |
| CTACAATCTGGGCAGCATAG+GGG | 0.695813 | 8_2:-39356008 | Msa1247060:CDS |
| CGGTGATTCATTCACCGGCG+GGG | 0.714860 | 8_2:-39358299 | Msa1247060:CDS |
| GGTGGAATTTGGGAACAACG+TGG | 0.738538 | 8_2:+39358684 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTACAAATTAGAAA+AGG | + | chr8_2:39355924-39355943 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTAAATGATACA+TGG | - | chr8_2:39356380-39356399 | Msa1247060:intron | 10.0% |
| !! | AAAAAATTACAAATTAGAAA+AGG | + | chr8_2:39355924-39355943 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTAAATGATACA+TGG | - | chr8_2:39356380-39356399 | Msa1247060:intron | 10.0% |
| !!! | TAATAATAAATTTGCTTACA+AGG | - | chr8_2:39356599-39356618 | Msa1247060:intron | 15.0% |
| !! | ATACAAATAATCAGTTAAAA+AGG | + | chr8_2:39357672-39357691 | None:intergenic | 15.0% |
| !! | TATAAACTTTATACAATTGA+TGG | - | chr8_2:39357949-39357968 | Msa1247060:intron | 15.0% |
| !! | ATAAACTTTATACAATTGAT+GGG | - | chr8_2:39357950-39357969 | Msa1247060:intron | 15.0% |
| !! | TTAAAATGAAATTAGATTGA+GGG | + | chr8_2:39358598-39358617 | None:intergenic | 15.0% |
| !!! | TTTAAAATGAAATTAGATTG+AGG | + | chr8_2:39358599-39358618 | None:intergenic | 15.0% |
| !!! | TAATAATAAATTTGCTTACA+AGG | - | chr8_2:39356599-39356618 | Msa1247060:intron | 15.0% |
| !! | ATACAAATAATCAGTTAAAA+AGG | + | chr8_2:39357672-39357691 | None:intergenic | 15.0% |
| !! | TATAAACTTTATACAATTGA+TGG | - | chr8_2:39357949-39357968 | Msa1247060:intron | 15.0% |
| !! | ATAAACTTTATACAATTGAT+GGG | - | chr8_2:39357950-39357969 | Msa1247060:intron | 15.0% |
| !! | TTAAAATGAAATTAGATTGA+GGG | + | chr8_2:39358598-39358617 | None:intergenic | 15.0% |
| !!! | TTTAAAATGAAATTAGATTG+AGG | + | chr8_2:39358599-39358618 | None:intergenic | 15.0% |
| !!! | TGTTACAAATTTCATGTTTT+AGG | - | chr8_2:39356306-39356325 | Msa1247060:CDS | 20.0% |
| !! | TTTATTCTGTTATTCTTTGA+TGG | - | chr8_2:39356443-39356462 | Msa1247060:intron | 20.0% |
| !! | ATGTATATCATAACATTGTA+TGG | - | chr8_2:39357094-39357113 | Msa1247060:CDS | 20.0% |
| !! | AACTGATTATTTGTATAATC+CGG | - | chr8_2:39357676-39357695 | Msa1247060:intron | 20.0% |
| !!! | ATTCTTATCATTTCATGTTT+TGG | - | chr8_2:39358318-39358337 | Msa1247060:CDS | 20.0% |
| !! | ATTCTGTTCAAAAAAGATAT+TGG | - | chr8_2:39358695-39358714 | Msa1247060:five_prime_UTR | 20.0% |
| !!! | TGTTACAAATTTCATGTTTT+AGG | - | chr8_2:39356306-39356325 | Msa1247060:CDS | 20.0% |
| !! | TTTATTCTGTTATTCTTTGA+TGG | - | chr8_2:39356443-39356462 | Msa1247060:intron | 20.0% |
| !! | ATGTATATCATAACATTGTA+TGG | - | chr8_2:39357094-39357113 | Msa1247060:CDS | 20.0% |
| !! | AACTGATTATTTGTATAATC+CGG | - | chr8_2:39357676-39357695 | Msa1247060:intron | 20.0% |
| !!! | ATTCTTATCATTTCATGTTT+TGG | - | chr8_2:39358318-39358337 | Msa1247060:CDS | 20.0% |
| !! | ATTCTGTTCAAAAAAGATAT+TGG | - | chr8_2:39358695-39358714 | Msa1247060:five_prime_UTR | 20.0% |
| ! | TACAAATTAGAAAAGGAAGA+AGG | + | chr8_2:39355917-39355936 | None:intergenic | 25.0% |
| !!! | TACAAATTTCATGTTTTAGG+TGG | - | chr8_2:39356309-39356328 | Msa1247060:CDS | 25.0% |
| ! | TATTAAATGATACATGGATG+TGG | - | chr8_2:39356386-39356405 | Msa1247060:intron | 25.0% |
| !!! | GTTAAACAATTTTAACGAAC+AGG | - | chr8_2:39356497-39356516 | Msa1247060:intron | 25.0% |
| ! | TTTCATCACATAGATAATTG+CGG | - | chr8_2:39356691-39356710 | Msa1247060:intron | 25.0% |
| ! | TAAGAATTAACATAGCAAAG+TGG | - | chr8_2:39356722-39356741 | Msa1247060:intron | 25.0% |
| ! | AAGAATTAACATAGCAAAGT+GGG | - | chr8_2:39356723-39356742 | Msa1247060:intron | 25.0% |
| ! | TTATGTAAGTGTCAAAAGAT+TGG | + | chr8_2:39356834-39356853 | None:intergenic | 25.0% |
| ! | AACATGTGAAATTTGTCATA+AGG | - | chr8_2:39357046-39357065 | Msa1247060:intron | 25.0% |
| !!! | CATTGTATGGTTTTGTTTAT+AGG | - | chr8_2:39357107-39357126 | Msa1247060:CDS | 25.0% |
| ! | AAGAAACTACCATTGATATA+GGG | - | chr8_2:39357334-39357353 | Msa1247060:intron | 25.0% |
| ! | TTAATCTTACCCTATATCAA+TGG | + | chr8_2:39357346-39357365 | None:intergenic | 25.0% |
| ! | TGTATAACCATAATTCTTGA+GGG | + | chr8_2:39357392-39357411 | None:intergenic | 25.0% |
| ! | ATGTATAACCATAATTCTTG+AGG | + | chr8_2:39357393-39357412 | None:intergenic | 25.0% |
| ! | CATTTACAAAATTGTATGTC+TGG | + | chr8_2:39357717-39357736 | None:intergenic | 25.0% |
| !! | CAATTTTGTAAATGAACTCT+AGG | - | chr8_2:39357723-39357742 | Msa1247060:intron | 25.0% |
| ! | TTATAAACTACATAGACAGA+AGG | + | chr8_2:39357934-39357953 | None:intergenic | 25.0% |
| ! | TTTCGTAAATAACAATGTCT+AGG | + | chr8_2:39358169-39358188 | None:intergenic | 25.0% |
| ! | TGAAATGATAAGAATACTGT+AGG | + | chr8_2:39358313-39358332 | None:intergenic | 25.0% |
| !!! | ATTTCATGTTTTGGTAATAC+AGG | - | chr8_2:39358327-39358346 | Msa1247060:CDS | 25.0% |
| !! | TTCAACAAGTCAATTTTACA+TGG | + | chr8_2:39358501-39358520 | None:intergenic | 25.0% |
| ! | AGTTATATTAGAATTAGAGC+CGG | + | chr8_2:39358553-39358572 | None:intergenic | 25.0% |
| ! | TACAAATTAGAAAAGGAAGA+AGG | + | chr8_2:39355917-39355936 | None:intergenic | 25.0% |
| !!! | TACAAATTTCATGTTTTAGG+TGG | - | chr8_2:39356309-39356328 | Msa1247060:CDS | 25.0% |
| ! | TATTAAATGATACATGGATG+TGG | - | chr8_2:39356386-39356405 | Msa1247060:intron | 25.0% |
| !!! | GTTAAACAATTTTAACGAAC+AGG | - | chr8_2:39356497-39356516 | Msa1247060:intron | 25.0% |
| ! | TTTCATCACATAGATAATTG+CGG | - | chr8_2:39356691-39356710 | Msa1247060:intron | 25.0% |
| ! | TAAGAATTAACATAGCAAAG+TGG | - | chr8_2:39356722-39356741 | Msa1247060:intron | 25.0% |
| ! | AAGAATTAACATAGCAAAGT+GGG | - | chr8_2:39356723-39356742 | Msa1247060:intron | 25.0% |
| ! | TTATGTAAGTGTCAAAAGAT+TGG | + | chr8_2:39356834-39356853 | None:intergenic | 25.0% |
| ! | AACATGTGAAATTTGTCATA+AGG | - | chr8_2:39357046-39357065 | Msa1247060:intron | 25.0% |
| !!! | CATTGTATGGTTTTGTTTAT+AGG | - | chr8_2:39357107-39357126 | Msa1247060:CDS | 25.0% |
| ! | AAGAAACTACCATTGATATA+GGG | - | chr8_2:39357334-39357353 | Msa1247060:intron | 25.0% |
| ! | TTAATCTTACCCTATATCAA+TGG | + | chr8_2:39357346-39357365 | None:intergenic | 25.0% |
| ! | TGTATAACCATAATTCTTGA+GGG | + | chr8_2:39357392-39357411 | None:intergenic | 25.0% |
| ! | ATGTATAACCATAATTCTTG+AGG | + | chr8_2:39357393-39357412 | None:intergenic | 25.0% |
| ! | CATTTACAAAATTGTATGTC+TGG | + | chr8_2:39357717-39357736 | None:intergenic | 25.0% |
| !! | CAATTTTGTAAATGAACTCT+AGG | - | chr8_2:39357723-39357742 | Msa1247060:intron | 25.0% |
| ! | TTATAAACTACATAGACAGA+AGG | + | chr8_2:39357934-39357953 | None:intergenic | 25.0% |
| ! | TTTCGTAAATAACAATGTCT+AGG | + | chr8_2:39358169-39358188 | None:intergenic | 25.0% |
| ! | TGAAATGATAAGAATACTGT+AGG | + | chr8_2:39358313-39358332 | None:intergenic | 25.0% |
| !!! | ATTTCATGTTTTGGTAATAC+AGG | - | chr8_2:39358327-39358346 | Msa1247060:CDS | 25.0% |
| !! | TTCAACAAGTCAATTTTACA+TGG | + | chr8_2:39358501-39358520 | None:intergenic | 25.0% |
| ! | AGTTATATTAGAATTAGAGC+CGG | + | chr8_2:39358553-39358572 | None:intergenic | 25.0% |
| AACGTGGAAAAGGATATTAT+AGG | + | chr8_2:39355699-39355718 | None:intergenic | 30.0% | |
| ! | GGATATTGATTAGATGTGAT+TGG | - | chr8_2:39356744-39356763 | Msa1247060:intron | 30.0% |
| !!! | GTATGGTTTTGTTTATAGGT+AGG | - | chr8_2:39357111-39357130 | Msa1247060:CDS | 30.0% |
| AGCAATATAATCAGGTTCAT+AGG | + | chr8_2:39357292-39357311 | None:intergenic | 30.0% | |
| ATATCAATGGTAGTTTCTTC+AGG | + | chr8_2:39357333-39357352 | None:intergenic | 30.0% | |
| GAAGAAACTACCATTGATAT+AGG | - | chr8_2:39357333-39357352 | Msa1247060:intron | 30.0% | |
| ACCAGAACATAGAATGAATT+AGG | + | chr8_2:39357810-39357829 | None:intergenic | 30.0% | |
| CTTACAGAGAAAAACATAGA+TGG | + | chr8_2:39357900-39357919 | None:intergenic | 30.0% | |
| !! | TCTTTTACCTTGCTATATCA+TGG | - | chr8_2:39358053-39358072 | Msa1247060:intron | 30.0% |
| ATACAAACTACACTTGTTCT+TGG | + | chr8_2:39358462-39358481 | None:intergenic | 30.0% | |
| ! | AAGAACAAGTGTAGTTTGTA+TGG | - | chr8_2:39358461-39358480 | Msa1247060:intron | 30.0% |
| ! | AAGTGTAGTTTGTATGGAAA+TGG | - | chr8_2:39358467-39358486 | Msa1247060:intron | 30.0% |
| GTTATATTAGAATTAGAGCC+GGG | + | chr8_2:39358552-39358571 | None:intergenic | 30.0% | |
| AACGTGGAAAAGGATATTAT+AGG | + | chr8_2:39355699-39355718 | None:intergenic | 30.0% | |
| ! | GGATATTGATTAGATGTGAT+TGG | - | chr8_2:39356744-39356763 | Msa1247060:intron | 30.0% |
| !!! | GTATGGTTTTGTTTATAGGT+AGG | - | chr8_2:39357111-39357130 | Msa1247060:CDS | 30.0% |
| AGCAATATAATCAGGTTCAT+AGG | + | chr8_2:39357292-39357311 | None:intergenic | 30.0% | |
| ATATCAATGGTAGTTTCTTC+AGG | + | chr8_2:39357333-39357352 | None:intergenic | 30.0% | |
| GAAGAAACTACCATTGATAT+AGG | - | chr8_2:39357333-39357352 | Msa1247060:intron | 30.0% | |
| ACCAGAACATAGAATGAATT+AGG | + | chr8_2:39357810-39357829 | None:intergenic | 30.0% | |
| CTTACAGAGAAAAACATAGA+TGG | + | chr8_2:39357900-39357919 | None:intergenic | 30.0% | |
| !! | TCTTTTACCTTGCTATATCA+TGG | - | chr8_2:39358053-39358072 | Msa1247060:intron | 30.0% |
| ATACAAACTACACTTGTTCT+TGG | + | chr8_2:39358462-39358481 | None:intergenic | 30.0% | |
| ! | AAGAACAAGTGTAGTTTGTA+TGG | - | chr8_2:39358461-39358480 | Msa1247060:intron | 30.0% |
| ! | AAGTGTAGTTTGTATGGAAA+TGG | - | chr8_2:39358467-39358486 | Msa1247060:intron | 30.0% |
| GTTATATTAGAATTAGAGCC+GGG | + | chr8_2:39358552-39358571 | None:intergenic | 30.0% | |
| GAAAGGTTAACGTTAGTGTT+CGG | + | chr8_2:39355739-39355758 | None:intergenic | 35.0% | |
| GCGTATATATAGGAAGAGAA+AGG | + | chr8_2:39355756-39355775 | None:intergenic | 35.0% | |
| ATTGGATTCGGCGTATATAT+AGG | + | chr8_2:39355766-39355785 | None:intergenic | 35.0% | |
| GTTTATAGAGCGAGAAAGAA+GGG | + | chr8_2:39355799-39355818 | None:intergenic | 35.0% | |
| AAAAAGGGAAGAGACAAGAA+GGG | + | chr8_2:39355821-39355840 | None:intergenic | 35.0% | |
| ! | TTGTCTCTTCCCTTTTTCTT+CGG | - | chr8_2:39355824-39355843 | Msa1247060:three_prime_UTR | 35.0% |
| ACAAACTCACCGAAGAAAAA+GGG | + | chr8_2:39355836-39355855 | None:intergenic | 35.0% | |
| ATGATACATGGATGTGGAAA+AGG | - | chr8_2:39356392-39356411 | Msa1247060:intron | 35.0% | |
| CATTGATGTTAGAGAGCTAT+TGG | - | chr8_2:39356522-39356541 | Msa1247060:CDS | 35.0% | |
| ! | GCTTACAAGGTTTTCTTCAT+AGG | - | chr8_2:39356612-39356631 | Msa1247060:intron | 35.0% |
| !! | ATACACAAAAGCATTGTTCC+CGG | + | chr8_2:39356911-39356930 | None:intergenic | 35.0% |
| ! | GGAACAATGCTTTTGTGTAT+GGG | - | chr8_2:39356911-39356930 | Msa1247060:intron | 35.0% |
| TTAGGAGGACATAAATAGAG+AGG | + | chr8_2:39356947-39356966 | None:intergenic | 35.0% | |
| TATCCAGCAGTTCGTAAATT+AGG | + | chr8_2:39356965-39356984 | None:intergenic | 35.0% | |
| TAGTCTTCCCTCAAGAATTA+TGG | - | chr8_2:39357382-39357401 | Msa1247060:CDS | 35.0% | |
| AATTGTGAACATTCTTGCAG+CGG | - | chr8_2:39357471-39357490 | Msa1247060:intron | 35.0% | |
| CATATTCAGCTTCGAAGAAT+TGG | + | chr8_2:39357569-39357588 | None:intergenic | 35.0% | |
| TTCTTCGAAGCTGAATATGA+TGG | - | chr8_2:39357570-39357589 | Msa1247060:intron | 35.0% | |
| ATCAGTTAAAAAGGACTGCT+TGG | + | chr8_2:39357663-39357682 | None:intergenic | 35.0% | |
| ! | TCATGCACATTGACTATGAT+AGG | - | chr8_2:39357750-39357769 | Msa1247060:intron | 35.0% |
| ! | CATGCACATTGACTATGATA+GGG | - | chr8_2:39357751-39357770 | Msa1247060:intron | 35.0% |
| GCCTAATTCATTCTATGTTC+TGG | - | chr8_2:39357806-39357825 | Msa1247060:intron | 35.0% | |
| TGCTTTCAAATATGTTGTCG+AGG | - | chr8_2:39357974-39357993 | Msa1247060:intron | 35.0% | |
| ! | CAATCAGTATTTTGCAACGA+CGG | - | chr8_2:39358082-39358101 | Msa1247060:intron | 35.0% |
| ! | GTCTAGGACATGAACAAATA+TGG | + | chr8_2:39358153-39358172 | None:intergenic | 35.0% |
| ACGTCTTTGATCTTAAGTGT+CGG | - | chr8_2:39358216-39358235 | Msa1247060:CDS | 35.0% | |
| ! | ATATCTCTTGCTCCTTTTTC+CGG | - | chr8_2:39358261-39358280 | Msa1247060:CDS | 35.0% |
| !!! | TCATGTTTTGGTAATACAGG+AGG | - | chr8_2:39358330-39358349 | Msa1247060:CDS | 35.0% |
| GAAAGGTTAACGTTAGTGTT+CGG | + | chr8_2:39355739-39355758 | None:intergenic | 35.0% | |
| GCGTATATATAGGAAGAGAA+AGG | + | chr8_2:39355756-39355775 | None:intergenic | 35.0% | |
| ATTGGATTCGGCGTATATAT+AGG | + | chr8_2:39355766-39355785 | None:intergenic | 35.0% | |
| GTTTATAGAGCGAGAAAGAA+GGG | + | chr8_2:39355799-39355818 | None:intergenic | 35.0% | |
| AAAAAGGGAAGAGACAAGAA+GGG | + | chr8_2:39355821-39355840 | None:intergenic | 35.0% | |
| ! | TTGTCTCTTCCCTTTTTCTT+CGG | - | chr8_2:39355824-39355843 | Msa1247060:three_prime_UTR | 35.0% |
| ACAAACTCACCGAAGAAAAA+GGG | + | chr8_2:39355836-39355855 | None:intergenic | 35.0% | |
| ATGATACATGGATGTGGAAA+AGG | - | chr8_2:39356392-39356411 | Msa1247060:intron | 35.0% | |
| CATTGATGTTAGAGAGCTAT+TGG | - | chr8_2:39356522-39356541 | Msa1247060:CDS | 35.0% | |
| ! | GCTTACAAGGTTTTCTTCAT+AGG | - | chr8_2:39356612-39356631 | Msa1247060:intron | 35.0% |
| !! | ATACACAAAAGCATTGTTCC+CGG | + | chr8_2:39356911-39356930 | None:intergenic | 35.0% |
| ! | GGAACAATGCTTTTGTGTAT+GGG | - | chr8_2:39356911-39356930 | Msa1247060:intron | 35.0% |
| TTAGGAGGACATAAATAGAG+AGG | + | chr8_2:39356947-39356966 | None:intergenic | 35.0% | |
| TATCCAGCAGTTCGTAAATT+AGG | + | chr8_2:39356965-39356984 | None:intergenic | 35.0% | |
| TAGTCTTCCCTCAAGAATTA+TGG | - | chr8_2:39357382-39357401 | Msa1247060:CDS | 35.0% | |
| AATTGTGAACATTCTTGCAG+CGG | - | chr8_2:39357471-39357490 | Msa1247060:intron | 35.0% | |
| CATATTCAGCTTCGAAGAAT+TGG | + | chr8_2:39357569-39357588 | None:intergenic | 35.0% | |
| TTCTTCGAAGCTGAATATGA+TGG | - | chr8_2:39357570-39357589 | Msa1247060:intron | 35.0% | |
| ATCAGTTAAAAAGGACTGCT+TGG | + | chr8_2:39357663-39357682 | None:intergenic | 35.0% | |
| ! | TCATGCACATTGACTATGAT+AGG | - | chr8_2:39357750-39357769 | Msa1247060:intron | 35.0% |
| ! | CATGCACATTGACTATGATA+GGG | - | chr8_2:39357751-39357770 | Msa1247060:intron | 35.0% |
| GCCTAATTCATTCTATGTTC+TGG | - | chr8_2:39357806-39357825 | Msa1247060:intron | 35.0% | |
| TGCTTTCAAATATGTTGTCG+AGG | - | chr8_2:39357974-39357993 | Msa1247060:intron | 35.0% | |
| ! | CAATCAGTATTTTGCAACGA+CGG | - | chr8_2:39358082-39358101 | Msa1247060:intron | 35.0% |
| ! | GTCTAGGACATGAACAAATA+TGG | + | chr8_2:39358153-39358172 | None:intergenic | 35.0% |
| ACGTCTTTGATCTTAAGTGT+CGG | - | chr8_2:39358216-39358235 | Msa1247060:CDS | 35.0% | |
| ! | ATATCTCTTGCTCCTTTTTC+CGG | - | chr8_2:39358261-39358280 | Msa1247060:CDS | 35.0% |
| !!! | TCATGTTTTGGTAATACAGG+AGG | - | chr8_2:39358330-39358349 | Msa1247060:CDS | 35.0% |
| ATTTGGGAACAACGTGGAAA+AGG | + | chr8_2:39355709-39355728 | None:intergenic | 40.0% | |
| GGAAGAGAGAGAATTGGATT+CGG | + | chr8_2:39355778-39355797 | None:intergenic | 40.0% | |
| AAGAAGGGAAGAGAGAGAAT+TGG | + | chr8_2:39355784-39355803 | None:intergenic | 40.0% | |
| GGTTTATAGAGCGAGAAAGA+AGG | + | chr8_2:39355800-39355819 | None:intergenic | 40.0% | |
| GAAAAAGGGAAGAGACAAGA+AGG | + | chr8_2:39355822-39355841 | None:intergenic | 40.0% | |
| GACAAACTCACCGAAGAAAA+AGG | + | chr8_2:39355837-39355856 | None:intergenic | 40.0% | |
| TCACGATCTCGAGAAAATGA+AGG | + | chr8_2:39355867-39355886 | None:intergenic | 40.0% | |
| ! | GAAATTTTCTCGAGATCGTG+TGG | + | chr8_2:39355893-39355912 | None:intergenic | 40.0% |
| TGAATCAATGAGCGATCATG+TGG | - | chr8_2:39355987-39356006 | Msa1247060:CDS | 40.0% | |
| ! | CAAGGTTTTCTTCATAGGCT+TGG | - | chr8_2:39356617-39356636 | Msa1247060:intron | 40.0% |
| ! | CTCTATCTGTGTTTTGTGCA+AGG | + | chr8_2:39356799-39356818 | None:intergenic | 40.0% |
| TCAAACACGCTCTTAGTAAC+CGG | - | chr8_2:39356889-39356908 | Msa1247060:CDS | 40.0% | |
| ! | GGGAACAATGCTTTTGTGTA+TGG | - | chr8_2:39356910-39356929 | Msa1247060:intron | 40.0% |
| ! | TGCTTTTGTGTATGGGACAT+TGG | - | chr8_2:39356918-39356937 | Msa1247060:intron | 40.0% |
| !! | AATTCACACAGAGAGTGCTT+TGG | + | chr8_2:39357207-39357226 | None:intergenic | 40.0% |
| ATGGTAGTTTCTTCAGGATG+TGG | + | chr8_2:39357327-39357346 | None:intergenic | 40.0% | |
| AGCAATCTGTTTCAAGCTGA+TGG | - | chr8_2:39357414-39357433 | Msa1247060:intron | 40.0% | |
| ! | TATGCTGCTTCTAATGCCAA+CGG | - | chr8_2:39357594-39357613 | Msa1247060:intron | 40.0% |
| CTATGTTCTGGTGCAGTTAA+TGG | - | chr8_2:39357818-39357837 | Msa1247060:intron | 40.0% | |
| ! | TAATGGCCCTTTTACTCTTG+AGG | - | chr8_2:39357835-39357854 | Msa1247060:intron | 40.0% |
| ! | TACCTTGCTATATCATGGCT+TGG | - | chr8_2:39358058-39358077 | Msa1247060:intron | 40.0% |
| ! | ACCTTGCTATATCATGGCTT+GGG | - | chr8_2:39358059-39358078 | Msa1247060:intron | 40.0% |
| ! | TATCTCTTGCTCCTTTTTCC+GGG | - | chr8_2:39358262-39358281 | Msa1247060:CDS | 40.0% |
| TGTTGCATATTCCCGGAAAA+AGG | + | chr8_2:39358276-39358295 | None:intergenic | 40.0% | |
| ! | CTGCATTTGTTGCATATTCC+CGG | + | chr8_2:39358283-39358302 | None:intergenic | 40.0% |
| TTGTAGCACGAAAGCAACTT+GGG | + | chr8_2:39358374-39358393 | None:intergenic | 40.0% | |
| ATTGTAGCACGAAAGCAACT+TGG | + | chr8_2:39358375-39358394 | None:intergenic | 40.0% | |
| TTGCTTTCGTGCTACAATCT+GGG | - | chr8_2:39358377-39358396 | Msa1247060:CDS | 40.0% | |
| ! | ACTACACTTGTTCTTGGTGT+GGG | + | chr8_2:39358456-39358475 | None:intergenic | 40.0% |
| AACTACACTTGTTCTTGGTG+TGG | + | chr8_2:39358457-39358476 | None:intergenic | 40.0% | |
| AATGATGAGCAAGAGTAGCA+TGG | + | chr8_2:39358527-39358546 | None:intergenic | 40.0% | |
| ! | ACTCTTGCTCATCATTTTCC+CGG | - | chr8_2:39358531-39358550 | Msa1247060:intron | 40.0% |
| ATTTGGGAACAACGTGGAAA+AGG | + | chr8_2:39355709-39355728 | None:intergenic | 40.0% | |
| GGAAGAGAGAGAATTGGATT+CGG | + | chr8_2:39355778-39355797 | None:intergenic | 40.0% | |
| AAGAAGGGAAGAGAGAGAAT+TGG | + | chr8_2:39355784-39355803 | None:intergenic | 40.0% | |
| GGTTTATAGAGCGAGAAAGA+AGG | + | chr8_2:39355800-39355819 | None:intergenic | 40.0% | |
| GAAAAAGGGAAGAGACAAGA+AGG | + | chr8_2:39355822-39355841 | None:intergenic | 40.0% | |
| GACAAACTCACCGAAGAAAA+AGG | + | chr8_2:39355837-39355856 | None:intergenic | 40.0% | |
| TCACGATCTCGAGAAAATGA+AGG | + | chr8_2:39355867-39355886 | None:intergenic | 40.0% | |
| ! | GAAATTTTCTCGAGATCGTG+TGG | + | chr8_2:39355893-39355912 | None:intergenic | 40.0% |
| TGAATCAATGAGCGATCATG+TGG | - | chr8_2:39355987-39356006 | Msa1247060:CDS | 40.0% | |
| ! | CAAGGTTTTCTTCATAGGCT+TGG | - | chr8_2:39356617-39356636 | Msa1247060:intron | 40.0% |
| ! | CTCTATCTGTGTTTTGTGCA+AGG | + | chr8_2:39356799-39356818 | None:intergenic | 40.0% |
| TCAAACACGCTCTTAGTAAC+CGG | - | chr8_2:39356889-39356908 | Msa1247060:CDS | 40.0% | |
| ! | GGGAACAATGCTTTTGTGTA+TGG | - | chr8_2:39356910-39356929 | Msa1247060:intron | 40.0% |
| ! | TGCTTTTGTGTATGGGACAT+TGG | - | chr8_2:39356918-39356937 | Msa1247060:intron | 40.0% |
| !! | AATTCACACAGAGAGTGCTT+TGG | + | chr8_2:39357207-39357226 | None:intergenic | 40.0% |
| ATGGTAGTTTCTTCAGGATG+TGG | + | chr8_2:39357327-39357346 | None:intergenic | 40.0% | |
| AGCAATCTGTTTCAAGCTGA+TGG | - | chr8_2:39357414-39357433 | Msa1247060:intron | 40.0% | |
| ! | TATGCTGCTTCTAATGCCAA+CGG | - | chr8_2:39357594-39357613 | Msa1247060:intron | 40.0% |
| CTATGTTCTGGTGCAGTTAA+TGG | - | chr8_2:39357818-39357837 | Msa1247060:intron | 40.0% | |
| ! | TAATGGCCCTTTTACTCTTG+AGG | - | chr8_2:39357835-39357854 | Msa1247060:intron | 40.0% |
| ! | TACCTTGCTATATCATGGCT+TGG | - | chr8_2:39358058-39358077 | Msa1247060:intron | 40.0% |
| ! | ACCTTGCTATATCATGGCTT+GGG | - | chr8_2:39358059-39358078 | Msa1247060:intron | 40.0% |
| ! | TATCTCTTGCTCCTTTTTCC+GGG | - | chr8_2:39358262-39358281 | Msa1247060:CDS | 40.0% |
| TGTTGCATATTCCCGGAAAA+AGG | + | chr8_2:39358276-39358295 | None:intergenic | 40.0% | |
| ! | CTGCATTTGTTGCATATTCC+CGG | + | chr8_2:39358283-39358302 | None:intergenic | 40.0% |
| TTGTAGCACGAAAGCAACTT+GGG | + | chr8_2:39358374-39358393 | None:intergenic | 40.0% | |
| ATTGTAGCACGAAAGCAACT+TGG | + | chr8_2:39358375-39358394 | None:intergenic | 40.0% | |
| TTGCTTTCGTGCTACAATCT+GGG | - | chr8_2:39358377-39358396 | Msa1247060:CDS | 40.0% | |
| ! | ACTACACTTGTTCTTGGTGT+GGG | + | chr8_2:39358456-39358475 | None:intergenic | 40.0% |
| AACTACACTTGTTCTTGGTG+TGG | + | chr8_2:39358457-39358476 | None:intergenic | 40.0% | |
| AATGATGAGCAAGAGTAGCA+TGG | + | chr8_2:39358527-39358546 | None:intergenic | 40.0% | |
| ! | ACTCTTGCTCATCATTTTCC+CGG | - | chr8_2:39358531-39358550 | Msa1247060:intron | 40.0% |
| !! | AGTGTTCGGTGGTGGAATTT+GGG | + | chr8_2:39355725-39355744 | None:intergenic | 45.0% |
| !! | TAGTGTTCGGTGGTGGAATT+TGG | + | chr8_2:39355726-39355745 | None:intergenic | 45.0% |
| ! | TTAACGTTAGTGTTCGGTGG+TGG | + | chr8_2:39355733-39355752 | None:intergenic | 45.0% |
| AGGTTAACGTTAGTGTTCGG+TGG | + | chr8_2:39355736-39355755 | None:intergenic | 45.0% | |
| !! | CGATCATGTGGTGTTGTTTG+TGG | - | chr8_2:39355999-39356018 | Msa1247060:CDS | 45.0% |
| TGAGTGTAGGATTTGTCAGG+AGG | - | chr8_2:39356197-39356216 | Msa1247060:intron | 45.0% | |
| ! | GGAGGATGGGATTGATAATC+TGG | - | chr8_2:39356218-39356237 | Msa1247060:intron | 45.0% |
| TACCTTAAGACTTCCGCTAC+AGG | + | chr8_2:39356256-39356275 | None:intergenic | 45.0% | |
| CAAACACGCTCTTAGTAACC+GGG | - | chr8_2:39356890-39356909 | Msa1247060:CDS | 45.0% | |
| CCAGCAGTTCGTAAATTAGG+AGG | + | chr8_2:39356962-39356981 | None:intergenic | 45.0% | |
| CCTCCTAATTTACGAACTGC+TGG | - | chr8_2:39356959-39356978 | Msa1247060:intron | 45.0% | |
| !! | GGTGGTGGAGCAATATAATC+AGG | + | chr8_2:39357300-39357319 | None:intergenic | 45.0% |
| TCTGCAATTGCCAACAATCG+AGG | + | chr8_2:39357537-39357556 | None:intergenic | 45.0% | |
| TCGATTGTTGGCAATTGCAG+AGG | - | chr8_2:39357536-39357555 | Msa1247060:intron | 45.0% | |
| TTACGATCAGAGCAGCTGAA+CGG | + | chr8_2:39357632-39357651 | None:intergenic | 45.0% | |
| GGGTGCTAACACTTTACACT+TGG | - | chr8_2:39357771-39357790 | Msa1247060:intron | 45.0% | |
| GCAAGGTAAAAGAAAGCCAG+CGG | + | chr8_2:39358046-39358065 | None:intergenic | 45.0% | |
| ! | GTTGCTTTCGTGCTACAATC+TGG | - | chr8_2:39358376-39358395 | Msa1247060:CDS | 45.0% |
| !! | AGTGTTCGGTGGTGGAATTT+GGG | + | chr8_2:39355725-39355744 | None:intergenic | 45.0% |
| !! | TAGTGTTCGGTGGTGGAATT+TGG | + | chr8_2:39355726-39355745 | None:intergenic | 45.0% |
| ! | TTAACGTTAGTGTTCGGTGG+TGG | + | chr8_2:39355733-39355752 | None:intergenic | 45.0% |
| AGGTTAACGTTAGTGTTCGG+TGG | + | chr8_2:39355736-39355755 | None:intergenic | 45.0% | |
| !! | CGATCATGTGGTGTTGTTTG+TGG | - | chr8_2:39355999-39356018 | Msa1247060:CDS | 45.0% |
| TGAGTGTAGGATTTGTCAGG+AGG | - | chr8_2:39356197-39356216 | Msa1247060:intron | 45.0% | |
| ! | GGAGGATGGGATTGATAATC+TGG | - | chr8_2:39356218-39356237 | Msa1247060:intron | 45.0% |
| TACCTTAAGACTTCCGCTAC+AGG | + | chr8_2:39356256-39356275 | None:intergenic | 45.0% | |
| CAAACACGCTCTTAGTAACC+GGG | - | chr8_2:39356890-39356909 | Msa1247060:CDS | 45.0% | |
| CCAGCAGTTCGTAAATTAGG+AGG | + | chr8_2:39356962-39356981 | None:intergenic | 45.0% | |
| CCTCCTAATTTACGAACTGC+TGG | - | chr8_2:39356959-39356978 | Msa1247060:intron | 45.0% | |
| !! | GGTGGTGGAGCAATATAATC+AGG | + | chr8_2:39357300-39357319 | None:intergenic | 45.0% |
| TCTGCAATTGCCAACAATCG+AGG | + | chr8_2:39357537-39357556 | None:intergenic | 45.0% | |
| TCGATTGTTGGCAATTGCAG+AGG | - | chr8_2:39357536-39357555 | Msa1247060:intron | 45.0% | |
| TTACGATCAGAGCAGCTGAA+CGG | + | chr8_2:39357632-39357651 | None:intergenic | 45.0% | |
| GGGTGCTAACACTTTACACT+TGG | - | chr8_2:39357771-39357790 | Msa1247060:intron | 45.0% | |
| GCAAGGTAAAAGAAAGCCAG+CGG | + | chr8_2:39358046-39358065 | None:intergenic | 45.0% | |
| ! | GTTGCTTTCGTGCTACAATC+TGG | - | chr8_2:39358376-39358395 | Msa1247060:CDS | 45.0% |
| !!! | ATAATAATAACTTTATTTAT+TGG | - | chr8_2:39358643-39358662 | Msa1247060:five_prime_UTR | 5.0% |
| !!! | ATAATAATAACTTTATTTAT+TGG | - | chr8_2:39358643-39358662 | Msa1247060:five_prime_UTR | 5.0% |
| GGTGGAATTTGGGAACAACG+TGG | + | chr8_2:39355715-39355734 | None:intergenic | 50.0% | |
| ATCTCCATCTGCTGCAACAG+CGG | + | chr8_2:39356174-39356193 | None:intergenic | 50.0% | |
| AGATGGAGATGGCTGAGTGT+AGG | - | chr8_2:39356184-39356203 | Msa1247060:intron | 50.0% | |
| GGCTGAGTGTAGGATTTGTC+AGG | - | chr8_2:39356194-39356213 | Msa1247060:intron | 50.0% | |
| GTGTAGGATTTGTCAGGAGG+AGG | - | chr8_2:39356200-39356219 | Msa1247060:intron | 50.0% | |
| AGGATTTGTCAGGAGGAGGA+TGG | - | chr8_2:39356204-39356223 | Msa1247060:intron | 50.0% | |
| GGATTTGTCAGGAGGAGGAT+GGG | - | chr8_2:39356205-39356224 | Msa1247060:intron | 50.0% | |
| ! | ATAGAAAGTGCGTCCAACGC+TGG | - | chr8_2:39357003-39357022 | Msa1247060:intron | 50.0% |
| !! | CTTTTTCGTTGCACCAGCGT+TGG | + | chr8_2:39357019-39357038 | None:intergenic | 50.0% |
| CAACGCTGGTGCAACGAAAA+AGG | - | chr8_2:39357017-39357036 | Msa1247060:intron | 50.0% | |
| GTTTCTTCAGGATGTGGACG+AGG | + | chr8_2:39357321-39357340 | None:intergenic | 50.0% | |
| TGTGAACATTCTTGCAGCGG+AGG | - | chr8_2:39357474-39357493 | Msa1247060:intron | 50.0% | |
| CTTGCGTGATCCTCGATTGT+TGG | - | chr8_2:39357524-39357543 | Msa1247060:intron | 50.0% | |
| CTGGTGCGCATATACATGAC+CGG | + | chr8_2:39357698-39357717 | None:intergenic | 50.0% | |
| CGCGTGCCTCAAGAGTAAAA+GGG | + | chr8_2:39357844-39357863 | None:intergenic | 50.0% | |
| GCCCAAGCCATGATATAGCA+AGG | + | chr8_2:39358063-39358082 | None:intergenic | 50.0% | |
| AATACAGGAGGCTGCAGCAT+TGG | - | chr8_2:39358342-39358361 | Msa1247060:CDS | 50.0% | |
| TGCTACAATCTGGGCAGCAT+AGG | - | chr8_2:39358386-39358405 | Msa1247060:CDS | 50.0% | |
| GCTACAATCTGGGCAGCATA+GGG | - | chr8_2:39358387-39358406 | Msa1247060:CDS | 50.0% | |
| CTACAATCTGGGCAGCATAG+GGG | - | chr8_2:39358388-39358407 | Msa1247060:CDS | 50.0% | |
| ! | ACTTGTTCTTGGTGTGGGTG+CGG | + | chr8_2:39358451-39358470 | None:intergenic | 50.0% |
| GGTGGAATTTGGGAACAACG+TGG | + | chr8_2:39355715-39355734 | None:intergenic | 50.0% | |
| ATCTCCATCTGCTGCAACAG+CGG | + | chr8_2:39356174-39356193 | None:intergenic | 50.0% | |
| AGATGGAGATGGCTGAGTGT+AGG | - | chr8_2:39356184-39356203 | Msa1247060:intron | 50.0% | |
| GGCTGAGTGTAGGATTTGTC+AGG | - | chr8_2:39356194-39356213 | Msa1247060:intron | 50.0% | |
| GTGTAGGATTTGTCAGGAGG+AGG | - | chr8_2:39356200-39356219 | Msa1247060:intron | 50.0% | |
| AGGATTTGTCAGGAGGAGGA+TGG | - | chr8_2:39356204-39356223 | Msa1247060:intron | 50.0% | |
| GGATTTGTCAGGAGGAGGAT+GGG | - | chr8_2:39356205-39356224 | Msa1247060:intron | 50.0% | |
| ! | ATAGAAAGTGCGTCCAACGC+TGG | - | chr8_2:39357003-39357022 | Msa1247060:intron | 50.0% |
| !! | CTTTTTCGTTGCACCAGCGT+TGG | + | chr8_2:39357019-39357038 | None:intergenic | 50.0% |
| CAACGCTGGTGCAACGAAAA+AGG | - | chr8_2:39357017-39357036 | Msa1247060:intron | 50.0% | |
| GTTTCTTCAGGATGTGGACG+AGG | + | chr8_2:39357321-39357340 | None:intergenic | 50.0% | |
| TGTGAACATTCTTGCAGCGG+AGG | - | chr8_2:39357474-39357493 | Msa1247060:intron | 50.0% | |
| CTTGCGTGATCCTCGATTGT+TGG | - | chr8_2:39357524-39357543 | Msa1247060:intron | 50.0% | |
| CTGGTGCGCATATACATGAC+CGG | + | chr8_2:39357698-39357717 | None:intergenic | 50.0% | |
| CGCGTGCCTCAAGAGTAAAA+GGG | + | chr8_2:39357844-39357863 | None:intergenic | 50.0% | |
| GCCCAAGCCATGATATAGCA+AGG | + | chr8_2:39358063-39358082 | None:intergenic | 50.0% | |
| AATACAGGAGGCTGCAGCAT+TGG | - | chr8_2:39358342-39358361 | Msa1247060:CDS | 50.0% | |
| TGCTACAATCTGGGCAGCAT+AGG | - | chr8_2:39358386-39358405 | Msa1247060:CDS | 50.0% | |
| GCTACAATCTGGGCAGCATA+GGG | - | chr8_2:39358387-39358406 | Msa1247060:CDS | 50.0% | |
| CTACAATCTGGGCAGCATAG+GGG | - | chr8_2:39358388-39358407 | Msa1247060:CDS | 50.0% | |
| ! | ACTTGTTCTTGGTGTGGGTG+CGG | + | chr8_2:39358451-39358470 | None:intergenic | 50.0% |
| !! | CCGGCATCGGTCGCATTAAT+CGG | + | chr8_2:39356026-39356045 | None:intergenic | 55.0% |
| CCGATTAATGCGACCGATGC+CGG | - | chr8_2:39356023-39356042 | Msa1247060:CDS | 55.0% | |
| TGTTGAGCCAACGGCTCAAC+CGG | + | chr8_2:39356045-39356064 | None:intergenic | 55.0% | |
| !! | TGAGCCGTTGGCTCAACATC+CGG | - | chr8_2:39356047-39356066 | Msa1247060:CDS | 55.0% |
| TGAGCCGGATGTTGAGCCAA+CGG | + | chr8_2:39356054-39356073 | None:intergenic | 55.0% | |
| GAATGAATCACCGGCGGCAT+CGG | + | chr8_2:39356090-39356109 | None:intergenic | 55.0% | |
| ! | TTCGGGTTCTTCCTCAGCGA+CGG | - | chr8_2:39356122-39356141 | Msa1247060:intron | 55.0% |
| ATCGTCATCATCCGTCGCTG+AGG | + | chr8_2:39356136-39356155 | None:intergenic | 55.0% | |
| ! | GCGACGGATGATGACGATGT+CGG | - | chr8_2:39356138-39356157 | Msa1247060:intron | 55.0% |
| GCTGTTGCAGCAGATGGAGA+TGG | - | chr8_2:39356173-39356192 | Msa1247060:intron | 55.0% | |
| GAGAATCCTTGCGCCTGTAG+CGG | - | chr8_2:39356240-39356259 | Msa1247060:intron | 55.0% | |
| ! | CGCCTGTAGCGGAAGTCTTA+AGG | - | chr8_2:39356251-39356270 | Msa1247060:intron | 55.0% |
| TCTTCAGGATGTGGACGAGG+TGG | + | chr8_2:39357318-39357337 | None:intergenic | 55.0% | |
| AACATTCTTGCAGCGGAGGC+TGG | - | chr8_2:39357478-39357497 | Msa1247060:intron | 55.0% | |
| CGAGGATCACGCAAGTCCAA+AGG | + | chr8_2:39357519-39357538 | None:intergenic | 55.0% | |
| ACGGCAAAATGCAGCTCCGT+TGG | + | chr8_2:39357613-39357632 | None:intergenic | 55.0% | |
| GCGCGTGCCTCAAGAGTAAA+AGG | + | chr8_2:39357845-39357864 | None:intergenic | 55.0% | |
| ! | CTTTTCTTGCTTCGAGCCGC+TGG | - | chr8_2:39358027-39358046 | Msa1247060:intron | 55.0% |
| ! | CACGGTTGCTGCTGGTGTTA+TGG | + | chr8_2:39358425-39358444 | None:intergenic | 55.0% |
| TTGGTGTGGGTGCGGATTCA+CGG | + | chr8_2:39358443-39358462 | None:intergenic | 55.0% | |
| !! | CCGGCATCGGTCGCATTAAT+CGG | + | chr8_2:39356026-39356045 | None:intergenic | 55.0% |
| CCGATTAATGCGACCGATGC+CGG | - | chr8_2:39356023-39356042 | Msa1247060:CDS | 55.0% | |
| TGTTGAGCCAACGGCTCAAC+CGG | + | chr8_2:39356045-39356064 | None:intergenic | 55.0% | |
| !! | TGAGCCGTTGGCTCAACATC+CGG | - | chr8_2:39356047-39356066 | Msa1247060:CDS | 55.0% |
| TGAGCCGGATGTTGAGCCAA+CGG | + | chr8_2:39356054-39356073 | None:intergenic | 55.0% | |
| GAATGAATCACCGGCGGCAT+CGG | + | chr8_2:39356090-39356109 | None:intergenic | 55.0% | |
| ! | TTCGGGTTCTTCCTCAGCGA+CGG | - | chr8_2:39356122-39356141 | Msa1247060:intron | 55.0% |
| ATCGTCATCATCCGTCGCTG+AGG | + | chr8_2:39356136-39356155 | None:intergenic | 55.0% | |
| ! | GCGACGGATGATGACGATGT+CGG | - | chr8_2:39356138-39356157 | Msa1247060:intron | 55.0% |
| GCTGTTGCAGCAGATGGAGA+TGG | - | chr8_2:39356173-39356192 | Msa1247060:intron | 55.0% | |
| GAGAATCCTTGCGCCTGTAG+CGG | - | chr8_2:39356240-39356259 | Msa1247060:intron | 55.0% | |
| ! | CGCCTGTAGCGGAAGTCTTA+AGG | - | chr8_2:39356251-39356270 | Msa1247060:intron | 55.0% |
| TCTTCAGGATGTGGACGAGG+TGG | + | chr8_2:39357318-39357337 | None:intergenic | 55.0% | |
| AACATTCTTGCAGCGGAGGC+TGG | - | chr8_2:39357478-39357497 | Msa1247060:intron | 55.0% | |
| CGAGGATCACGCAAGTCCAA+AGG | + | chr8_2:39357519-39357538 | None:intergenic | 55.0% | |
| ACGGCAAAATGCAGCTCCGT+TGG | + | chr8_2:39357613-39357632 | None:intergenic | 55.0% | |
| GCGCGTGCCTCAAGAGTAAA+AGG | + | chr8_2:39357845-39357864 | None:intergenic | 55.0% | |
| ! | CTTTTCTTGCTTCGAGCCGC+TGG | - | chr8_2:39358027-39358046 | Msa1247060:intron | 55.0% |
| ! | CACGGTTGCTGCTGGTGTTA+TGG | + | chr8_2:39358425-39358444 | None:intergenic | 55.0% |
| TTGGTGTGGGTGCGGATTCA+CGG | + | chr8_2:39358443-39358462 | None:intergenic | 55.0% | |
| GCCGCCGGTGATTCATTCAC+CGG | - | chr8_2:39356092-39356111 | Msa1247060:intron | 60.0% | |
| GCCGGTGAATGAATCACCGG+CGG | + | chr8_2:39356096-39356115 | None:intergenic | 60.0% | |
| GCCGGTGATTCATTCACCGG+CGG | - | chr8_2:39356095-39356114 | Msa1247060:intron | 60.0% | |
| CCCGCCGGTGAATGAATCAC+CGG | + | chr8_2:39356099-39356118 | None:intergenic | 60.0% | |
| CCGGTGATTCATTCACCGGC+GGG | - | chr8_2:39356096-39356115 | Msa1247060:intron | 60.0% | |
| CGGTGATTCATTCACCGGCG+GGG | - | chr8_2:39356097-39356116 | Msa1247060:intron | 60.0% | |
| GTCGCTGAGGAAGAACCCGA+AGG | + | chr8_2:39356123-39356142 | None:intergenic | 60.0% | |
| ! | GGATGATGACGATGTCGGCG+AGG | - | chr8_2:39356143-39356162 | Msa1247060:intron | 60.0% |
| AGACTTCCGCTACAGGCGCA+AGG | + | chr8_2:39356249-39356268 | None:intergenic | 60.0% | |
| TCAGGATGTGGACGAGGTGG+TGG | + | chr8_2:39357315-39357334 | None:intergenic | 60.0% | |
| GACACTCTCTGGCACGCCTT+TGG | - | chr8_2:39357500-39357519 | Msa1247060:intron | 60.0% | |
| GAGGCACGCGCTTTCTGTCA+CGG | - | chr8_2:39357854-39357873 | Msa1247060:intron | 60.0% | |
| ! | ACAGGAGGCTGCAGCATTGG+CGG | - | chr8_2:39358345-39358364 | Msa1247060:CDS | 60.0% |
| TGCGGATTCACGGTTGCTGC+TGG | + | chr8_2:39358433-39358452 | None:intergenic | 60.0% | |
| GCCGCCGGTGATTCATTCAC+CGG | - | chr8_2:39356092-39356111 | Msa1247060:intron | 60.0% | |
| GCCGGTGAATGAATCACCGG+CGG | + | chr8_2:39356096-39356115 | None:intergenic | 60.0% | |
| GCCGGTGATTCATTCACCGG+CGG | - | chr8_2:39356095-39356114 | Msa1247060:intron | 60.0% | |
| CCCGCCGGTGAATGAATCAC+CGG | + | chr8_2:39356099-39356118 | None:intergenic | 60.0% | |
| CCGGTGATTCATTCACCGGC+GGG | - | chr8_2:39356096-39356115 | Msa1247060:intron | 60.0% | |
| CGGTGATTCATTCACCGGCG+GGG | - | chr8_2:39356097-39356116 | Msa1247060:intron | 60.0% | |
| GTCGCTGAGGAAGAACCCGA+AGG | + | chr8_2:39356123-39356142 | None:intergenic | 60.0% | |
| ! | GGATGATGACGATGTCGGCG+AGG | - | chr8_2:39356143-39356162 | Msa1247060:intron | 60.0% |
| AGACTTCCGCTACAGGCGCA+AGG | + | chr8_2:39356249-39356268 | None:intergenic | 60.0% | |
| TCAGGATGTGGACGAGGTGG+TGG | + | chr8_2:39357315-39357334 | None:intergenic | 60.0% | |
| GACACTCTCTGGCACGCCTT+TGG | - | chr8_2:39357500-39357519 | Msa1247060:intron | 60.0% | |
| GAGGCACGCGCTTTCTGTCA+CGG | - | chr8_2:39357854-39357873 | Msa1247060:intron | 60.0% | |
| ! | ACAGGAGGCTGCAGCATTGG+CGG | - | chr8_2:39358345-39358364 | Msa1247060:CDS | 60.0% |
| TGCGGATTCACGGTTGCTGC+TGG | + | chr8_2:39358433-39358452 | None:intergenic | 60.0% | |
| ! | ACCGATGCCGGTTGAGCCGT+TGG | - | chr8_2:39356035-39356054 | Msa1247060:CDS | 65.0% |
| GCCAACGGCTCAACCGGCAT+CGG | + | chr8_2:39356039-39356058 | None:intergenic | 65.0% | |
| GGTTCAGGAGCAGGCTGAGC+CGG | + | chr8_2:39356069-39356088 | None:intergenic | 65.0% | |
| TGCTCCTGAACCGATGCCGC+CGG | - | chr8_2:39356077-39356096 | Msa1247060:intron | 65.0% | |
| !! | ATCACCGGCGGCATCGGTTC+AGG | + | chr8_2:39356084-39356103 | None:intergenic | 65.0% |
| TCATTCACCGGCGGGGCCTT+CGG | - | chr8_2:39356104-39356123 | Msa1247060:intron | 65.0% | |
| CGAGCCGCTGTTGCAGCAGA+TGG | - | chr8_2:39356167-39356186 | Msa1247060:intron | 65.0% | |
| AGCGGAGGCTGGACACTCTC+TGG | - | chr8_2:39357489-39357508 | Msa1247060:intron | 65.0% | |
| ! | ACCGATGCCGGTTGAGCCGT+TGG | - | chr8_2:39356035-39356054 | Msa1247060:CDS | 65.0% |
| GCCAACGGCTCAACCGGCAT+CGG | + | chr8_2:39356039-39356058 | None:intergenic | 65.0% | |
| GGTTCAGGAGCAGGCTGAGC+CGG | + | chr8_2:39356069-39356088 | None:intergenic | 65.0% | |
| TGCTCCTGAACCGATGCCGC+CGG | - | chr8_2:39356077-39356096 | Msa1247060:intron | 65.0% | |
| !! | ATCACCGGCGGCATCGGTTC+AGG | + | chr8_2:39356084-39356103 | None:intergenic | 65.0% |
| TCATTCACCGGCGGGGCCTT+CGG | - | chr8_2:39356104-39356123 | Msa1247060:intron | 65.0% | |
| CGAGCCGCTGTTGCAGCAGA+TGG | - | chr8_2:39356167-39356186 | Msa1247060:intron | 65.0% | |
| AGCGGAGGCTGGACACTCTC+TGG | - | chr8_2:39357489-39357508 | Msa1247060:intron | 65.0% | |
| !! | GGCGGCATCGGTTCAGGAGC+AGG | + | chr8_2:39356078-39356097 | None:intergenic | 70.0% |
| CATTCACCGGCGGGGCCTTC+GGG | - | chr8_2:39356105-39356124 | Msa1247060:intron | 70.0% | |
| GAAGAACCCGAAGGCCCCGC+CGG | + | chr8_2:39356114-39356133 | None:intergenic | 70.0% | |
| !! | GGCGGCATCGGTTCAGGAGC+AGG | + | chr8_2:39356078-39356097 | None:intergenic | 70.0% |
| CATTCACCGGCGGGGCCTTC+GGG | - | chr8_2:39356105-39356124 | Msa1247060:intron | 70.0% | |
| GAAGAACCCGAAGGCCCCGC+CGG | + | chr8_2:39356114-39356133 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 39355686 | 39358732 | 39355686 | ID=Msa1247060;Name=Msa1247060 |
| chr8_2 | mRNA | 39355686 | 39358732 | 39355686 | ID=Msa1247060-mRNA-1;Parent=Msa1247060;Name=Msa1247060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=185|1|1|1|0.85|0.75|8|258|290 |
| chr8_2 | exon | 39355686 | 39356069 | 39355686 | ID=Msa1247060-mRNA-1:exon:12172;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39356302 | 39356391 | 39356302 | ID=Msa1247060-mRNA-1:exon:12171;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39356504 | 39356584 | 39356504 | ID=Msa1247060-mRNA-1:exon:12170;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39356771 | 39356927 | 39356771 | ID=Msa1247060-mRNA-1:exon:12169;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39357063 | 39357130 | 39357063 | ID=Msa1247060-mRNA-1:exon:12168;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39357351 | 39357422 | 39357351 | ID=Msa1247060-mRNA-1:exon:12167;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39358146 | 39358449 | 39358146 | ID=Msa1247060-mRNA-1:exon:12166;Parent=Msa1247060-mRNA-1 |
| chr8_2 | exon | 39358573 | 39358732 | 39358573 | ID=Msa1247060-mRNA-1:exon:12165;Parent=Msa1247060-mRNA-1 |
| chr8_2 | five_prime_UTR | 39358573 | 39358732 | 39358573 | ID=Msa1247060-mRNA-1:five_prime_utr;Parent=Msa1247060-mRNA-1 |
| chr8_2 | five_prime_UTR | 39358425 | 39358449 | 39358425 | ID=Msa1247060-mRNA-1:five_prime_utr;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39358146 | 39358424 | 39358146 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39357351 | 39357422 | 39357351 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39357063 | 39357130 | 39357063 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39356771 | 39356927 | 39356771 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39356504 | 39356584 | 39356504 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39356302 | 39356391 | 39356302 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | CDS | 39355944 | 39356069 | 39355944 | ID=Msa1247060-mRNA-1:cds;Parent=Msa1247060-mRNA-1 |
| chr8_2 | three_prime_UTR | 39355686 | 39355943 | 39355686 | ID=Msa1247060-mRNA-1:three_prime_utr;Parent=Msa1247060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
