AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249580 MtrunA17_Chr8g0365241 96.089 358 14 0 18 375 5 362 0.0 713
Msa1249580 MtrunA17_Chr5g0420981 91.061 358 31 1 19 375 1 358 0.0 675
Msa1249580 MtrunA17_Chr5g0420951 84.637 358 54 1 19 375 1 358 0.0 629
Msa1249580 MtrunA17_Chr5g0423191 69.318 352 107 1 24 375 1 351 0.0 517
Msa1249580 MtrunA17_Chr5g0420941 66.859 347 114 1 29 375 4 349 1.35e-177 497
Msa1249580 MtrunA17_Chr5g0421101 68.678 348 108 1 28 375 5 351 5.32e-176 493
Msa1249580 MtrunA17_Chr5g0423251 66.286 350 117 1 26 375 3 351 1.52e-175 492
Msa1249580 MtrunA17_Chr5g0421041 66.000 350 116 2 26 375 3 349 1.06e-174 490
Msa1249580 MtrunA17_Chr5g0420901 65.616 349 118 2 28 375 3 350 1.96e-174 489
Msa1249580 MtrunA17_Chr5g0423221 66.476 349 115 2 28 375 29 376 1.05e-170 481
Msa1249580 MtrunA17_Chr5g0421011 66.761 352 116 1 24 375 1 351 3.71e-170 478
Msa1249580 MtrunA17_Chr5g0421091 64.368 348 122 2 29 375 4 350 4.36e-168 473
Msa1249580 MtrunA17_Chr5g0423211 64.205 352 119 4 28 374 3 352 1.78e-166 469
Msa1249580 MtrunA17_Chr5g0423201 63.897 349 124 2 28 375 5 352 9.48e-165 465
Msa1249580 MtrunA17_Chr8g0375671 60.278 360 140 1 19 375 1 360 1.68e-164 464
Msa1249580 MtrunA17_Chr2g0314401 60.405 346 136 1 28 372 9 354 5.68e-159 450
Msa1249580 MtrunA17_Chr8g0375571 60.807 347 133 1 29 372 4 350 3.74e-154 438
Msa1249580 MtrunA17_Chr2g0314391 59.312 349 141 1 28 375 28 376 5.83e-153 436
Msa1249580 MtrunA17_Chr2g0314381 59.714 350 139 2 28 375 34 383 5.61e-152 434
Msa1249580 MtrunA17_Chr8g0375601 58.908 348 138 2 33 375 8 355 7.34e-152 432
Msa1249580 MtrunA17_Chr1g0162191 55.271 351 150 3 24 372 5 350 4.23e-137 395
Msa1249580 MtrunA17_Chr5g0420721 67.200 250 82 0 126 375 4 253 1.53e-128 369
Msa1249580 MtrunA17_Chr8g0375681 60.949 274 107 0 102 375 15 288 1.13e-125 363
Msa1249580 MtrunA17_Chr8g0375701 44.928 345 187 3 29 372 13 355 1.45e-112 332
Msa1249580 MtrunA17_Chr2g0314371 52.997 317 123 4 28 320 9 323 8.86e-111 327
Msa1249580 MtrunA17_Chr3g0087031 41.595 351 199 4 25 372 13 360 1.77e-96 291
Msa1249580 MtrunA17_Chr7g0239101 39.420 345 207 2 30 373 14 357 7.79e-95 287
Msa1249580 MtrunA17_Chr2g0296371 40.751 346 198 4 33 373 14 357 9.01e-95 287
Msa1249580 MtrunA17_Chr7g0239821 39.368 348 203 3 30 373 23 366 7.55e-94 285
Msa1249580 MtrunA17_Chr7g0239111 39.420 345 207 2 30 373 14 357 1.18e-93 284
Msa1249580 MtrunA17_Chr7g0239121 38.793 348 210 3 30 375 10 356 3.14e-89 273
Msa1249580 MtrunA17_Chr7g0232161 40.260 308 180 3 30 336 19 323 1.84e-81 251
Msa1249580 MtrunA17_Chr5g0437181 38.080 323 194 3 36 352 14 336 2.88e-80 250
Msa1249580 MtrunA17_Chr5g0420881 70.068 147 44 0 229 375 1 147 1.45e-79 241
Msa1249580 MtrunA17_Chr7g0242551 36.890 328 196 4 36 352 15 342 2.30e-79 248
Msa1249580 MtrunA17_Chr4g0006371 35.588 340 199 4 33 352 11 350 2.96e-74 235
Msa1249580 MtrunA17_Chr3g0128001 39.185 319 189 3 45 362 13 327 7.03e-73 230
Msa1249580 MtrunA17_Chr3g0145171 38.255 298 180 3 69 364 51 346 1.02e-72 230
Msa1249580 MtrunA17_Chr3g0113641 34.211 342 219 3 36 371 15 356 1.20e-72 230
Msa1249580 MtrunA17_Chr5g0426891 37.931 348 198 9 35 372 3 342 6.18e-72 228
Msa1249580 MtrunA17_Chr7g0239071 34.459 296 191 2 80 375 12 304 1.06e-69 221
Msa1249580 MtrunA17_Chr3g0109041 33.908 348 218 7 36 374 10 354 6.61e-67 215
Msa1249580 MtrunA17_Chr8g0345831 34.402 343 216 6 30 368 2 339 6.90e-67 215
Msa1249580 MtrunA17_Chr7g0239091 33.235 340 215 4 34 372 123 451 2.09e-65 214
Msa1249580 MtrunA17_Chr8g0370721 35.948 306 192 3 69 372 51 354 5.52e-65 210
Msa1249580 MtrunA17_Chr8g0370711 35.294 306 194 3 69 372 51 354 9.32e-64 207
Msa1249580 MtrunA17_Chr5g0420891 63.924 158 55 2 28 184 3 159 1.78e-63 200
Msa1249580 MtrunA17_Chr8g0375641 56.213 169 71 1 19 184 1 169 2.30e-63 200
Msa1249580 MtrunA17_Chr1g0179801 31.445 353 222 6 35 372 26 373 4.35e-63 206
Msa1249580 MtrunA17_Chr8g0375661 57.595 158 64 1 30 184 12 169 1.86e-61 195
Msa1249580 MtrunA17_Chr4g0064781 33.141 347 221 6 31 374 12 350 2.69e-60 198
Msa1249580 MtrunA17_Chr5g0398291 35.385 325 191 7 36 344 8 329 1.48e-59 196
Msa1249580 MtrunA17_Chr3g0125201 36.900 271 159 2 70 335 3 266 6.27e-58 191
Msa1249580 MtrunA17_Chr7g0265221 30.484 351 217 6 44 372 35 380 6.73e-58 192
Msa1249580 MtrunA17_Chr3g0145181 34.154 325 197 6 35 347 12 331 4.47e-56 187
Msa1249580 MtrunA17_Chr3g0114861 31.118 331 219 4 33 359 3 328 7.57e-56 186
Msa1249580 MtrunA17_Chr4g0045411 32.099 324 195 7 48 352 8 325 2.67e-52 177
Msa1249580 MtrunA17_Chr5g0412651 34.441 331 195 10 43 360 12 333 3.36e-52 177
Msa1249580 MtrunA17_Chr5g0424201 30.816 331 214 8 31 353 4 327 6.18e-52 176
Msa1249580 MtrunA17_Chr4g0050031 32.797 311 195 6 70 372 62 366 6.19e-52 177
Msa1249580 MtrunA17_Chr3g0126741 34.304 309 189 6 70 371 59 360 6.44e-52 177
Msa1249580 MtrunA17_Chr3g0145201 35.439 285 177 4 69 347 683 966 1.55e-51 184
Msa1249580 MtrunA17_Chr2g0332191 30.909 330 209 7 44 362 25 346 2.19e-51 175
Msa1249580 MtrunA17_Chr1g0204181 31.579 342 196 6 44 348 6 346 2.30e-51 176
Msa1249580 MtrunA17_Chr8g0351101 33.333 315 196 7 44 348 30 340 5.93e-51 174
Msa1249580 MtrunA17_Chr8g0371931 32.394 284 184 5 53 331 23 303 9.14e-51 174
Msa1249580 MtrunA17_Chr7g0266651 28.571 350 232 8 35 374 23 364 9.92e-51 173
Msa1249580 MtrunA17_Chr5g0412681 33.754 317 192 9 50 359 14 319 9.96e-51 173
Msa1249580 MtrunA17_Chr3g0121141 29.766 299 195 6 71 364 5 293 1.42e-50 171
Msa1249580 MtrunA17_Chr7g0250511 28.363 342 238 6 35 372 13 351 1.89e-50 172
Msa1249580 MtrunA17_Chr5g0439011 30.363 303 192 6 71 364 6 298 2.91e-50 171
Msa1249580 MtrunA17_Chr2g0289341 29.431 299 198 5 71 364 5 295 3.62e-50 171
Msa1249580 MtrunA17_Chr1g0162361 30.841 321 195 7 51 353 8 319 4.02e-50 171
Msa1249580 MtrunA17_Chr8g0371921 32.979 282 181 5 55 331 25 303 6.38e-50 171
Msa1249580 MtrunA17_Chr1g0162351 31.169 308 180 7 63 344 62 363 1.34e-49 171
Msa1249580 MtrunA17_Chr8g0336851 30.508 354 228 8 19 363 11 355 3.09e-49 169
Msa1249580 MtrunA17_Chr6g0474391 31.329 316 188 5 57 344 33 347 3.86e-49 170
Msa1249580 MtrunA17_Chr1g0162321 31.169 308 180 7 63 344 62 363 1.36e-48 169
Msa1249580 MtrunA17_Chr1g0187821 30.882 340 214 8 45 372 40 370 1.37e-48 168
Msa1249580 MtrunA17_Chr1g0187831 30.523 344 213 9 44 371 40 373 3.21e-48 167
Msa1249580 MtrunA17_Chr7g0220001 32.399 321 202 7 45 359 16 327 6.66e-48 165
Msa1249580 MtrunA17_Chr8g0354261 29.096 354 230 8 35 375 32 377 9.03e-48 166
Msa1249580 MtrunA17_Chr5g0424211 31.373 306 195 8 45 341 16 315 1.73e-47 164
Msa1249580 MtrunA17_Chr3g0102041 34.855 241 154 2 93 331 64 303 1.83e-47 164
Msa1249580 MtrunA17_Chr4g0045471 31.788 302 171 9 70 344 26 319 3.73e-47 164
Msa1249580 MtrunA17_Chr2g0311761 31.014 345 227 5 35 372 32 372 4.12e-47 164
Msa1249580 MtrunA17_Chr5g0405411 32.155 283 184 5 54 331 24 303 4.52e-47 164
Msa1249580 MtrunA17_Chr8g0336861 30.746 335 215 7 35 360 27 353 5.70e-47 164
Msa1249580 MtrunA17_Chr8g0336751 30.473 338 219 8 35 363 58 388 6.16e-47 164
Msa1249580 MtrunA17_Chr8g0336761 30.473 338 217 8 35 363 27 355 6.64e-47 163
Msa1249580 MtrunA17_Chr2g0311921 29.762 336 225 5 35 363 18 349 1.01e-46 163
Msa1249580 MtrunA17_Chr7g0220011 31.288 326 199 8 45 359 14 325 1.61e-46 161
Msa1249580 MtrunA17_Chr8g0354241 28.977 352 229 8 35 373 32 375 1.93e-46 162
Msa1249580 MtrunA17_Chr5g0412671 33.333 309 193 8 61 360 29 333 3.02e-46 161
Msa1249580 MtrunA17_Chr8g0336781 30.357 336 221 7 35 363 62 391 3.65e-46 162
Msa1249580 MtrunA17_Chr8g0336631 30.267 337 220 7 35 363 27 356 3.97e-46 161
Msa1249580 MtrunA17_Chr1g0161041 29.825 342 223 9 35 368 59 391 7.03e-46 161
Msa1249580 MtrunA17_Chr6g0455481 32.000 325 199 8 45 359 17 329 7.54e-46 160
Msa1249580 MtrunA17_Chr1g0191201 33.333 279 175 5 69 337 52 329 9.45e-46 160
Msa1249580 MtrunA17_Chr8g0348081 29.762 336 222 6 35 363 27 355 1.67e-45 160
Msa1249580 MtrunA17_Chr3g0125421 31.922 307 185 7 69 357 35 335 4.01e-45 159
Msa1249580 MtrunA17_Chr2g0311831 30.952 336 220 6 35 363 32 362 4.52e-45 159
Msa1249580 MtrunA17_Chr1g0184161 32.716 324 195 9 47 359 15 326 6.49e-45 157
Msa1249580 MtrunA17_Chr3g0130391 31.973 294 189 5 71 354 67 359 7.97e-45 158
Msa1249580 MtrunA17_Chr2g0311691 29.940 334 213 9 35 354 26 352 2.62e-44 157
Msa1249580 MtrunA17_Chr1g0184111 30.699 329 214 7 41 362 8 329 5.55e-44 155
Msa1249580 MtrunA17_Chr4g0055591 29.261 352 221 11 35 372 24 361 5.85e-44 155
Msa1249580 MtrunA17_Chr8g0375591 59.843 127 47 2 30 152 5 131 7.87e-44 148
Msa1249580 MtrunA17_Chr1g0184101 31.290 310 204 5 69 374 37 341 8.77e-44 154
Msa1249580 MtrunA17_Chr3g0093761 31.034 348 211 10 35 368 17 349 9.54e-44 155
Msa1249580 MtrunA17_Chr2g0285931 31.646 316 193 10 59 361 17 322 1.01e-43 154
Msa1249580 MtrunA17_Chr4g0045451 29.630 324 198 8 54 353 10 327 2.83e-43 153
Msa1249580 MtrunA17_Chr4g0045441 30.746 335 202 8 54 364 10 338 3.07e-43 153
Msa1249580 MtrunA17_Chr7g0265351 33.871 310 181 9 69 368 38 333 4.54e-43 152
Msa1249580 MtrunA17_Chr1g0161111 30.636 346 221 10 35 371 95 430 6.69e-43 154
Msa1249580 MtrunA17_Chr6g0472861 29.296 355 230 9 35 374 27 375 7.74e-43 153
Msa1249580 MtrunA17_Chr1g0161081 30.178 338 219 8 35 364 36 364 1.11e-42 152
Msa1249580 MtrunA17_Chr1g0184151 30.462 325 207 8 44 359 12 326 1.25e-42 151
Msa1249580 MtrunA17_Chr1g0187811 28.134 359 241 8 25 372 141 493 1.28e-42 155
Msa1249580 MtrunA17_Chr3g0093741 30.029 343 222 9 35 368 17 350 2.01e-42 151
Msa1249580 MtrunA17_Chr2g0311681 29.851 335 212 11 35 354 26 352 2.21e-42 151
Msa1249580 MtrunA17_Chr2g0311741 28.808 302 207 5 62 361 22 317 4.05e-42 150
Msa1249580 MtrunA17_Chr4g0068891 32.781 302 182 9 70 361 20 310 6.03e-42 149
Msa1249580 MtrunA17_Chr7g0235951 28.000 350 232 7 35 372 32 373 7.42e-42 150
Msa1249580 MtrunA17_Chr3g0093751 30.946 349 211 11 35 368 17 350 2.10e-41 149
Msa1249580 MtrunA17_Chr1g0184121 29.755 326 215 7 41 359 8 326 2.33e-41 148
Msa1249580 MtrunA17_Chr4g0066121 29.448 326 215 8 35 352 27 345 2.35e-41 149
Msa1249580 MtrunA17_Chr6g0488511 29.568 301 192 6 70 364 3 289 3.24e-41 147
Msa1249580 MtrunA17_Chr2g0311711 28.824 340 220 9 35 361 30 360 5.46e-41 148
Msa1249580 MtrunA17_Chr2g0311701 28.070 342 223 7 35 361 32 365 3.02e-40 146
Msa1249580 MtrunA17_Chr4g0045431 31.615 291 165 7 54 318 10 292 4.34e-40 145
Msa1249580 MtrunA17_Chr8g0384461 29.283 321 210 7 45 354 24 338 1.00e-39 144
Msa1249580 MtrunA17_Chr7g0225881 28.363 342 225 9 35 363 27 361 1.03e-39 144
Msa1249580 MtrunA17_Chr1g0148771 30.233 301 194 8 70 367 63 350 1.16e-39 144
Msa1249580 MtrunA17_Chr2g0311631 29.917 361 226 7 13 364 11 353 5.77e-39 142
Msa1249580 MtrunA17_Chr2g0319491 28.986 276 174 6 63 329 26 288 9.49e-39 141
Msa1249580 MtrunA17_Chr1g0170631 35.897 195 120 3 184 375 3 195 4.60e-37 132
Msa1249580 MtrunA17_Chr4g0045461 30.645 310 194 6 63 353 19 326 4.78e-37 137
Msa1249580 MtrunA17_Chr2g0311861 28.060 335 211 6 35 363 28 338 5.01e-37 137
Msa1249580 MtrunA17_Chr2g0313111 31.293 294 177 11 51 336 14 290 5.13e-37 136
Msa1249580 MtrunA17_Chr1g0184241 27.545 334 229 6 35 363 33 358 5.27e-37 137
Msa1249580 MtrunA17_Chr4g0066991 27.596 337 212 5 35 363 32 344 2.75e-36 135
Msa1249580 MtrunA17_Chr8g0364471 26.608 342 229 8 35 363 32 364 3.88e-36 135
Msa1249580 MtrunA17_Chr8g0375581 66.279 86 29 0 205 290 1 86 1.61e-35 125
Msa1249580 MtrunA17_Chr1g0167911 27.941 340 223 5 35 363 19 347 1.71e-35 133
Msa1249580 MtrunA17_Chr8g0358941 28.834 326 206 10 64 374 21 335 2.15e-35 132
Msa1249580 MtrunA17_Chr7g0236011 27.485 342 226 10 35 363 32 364 5.71e-35 132
Msa1249580 MtrunA17_Chr3g0114871 31.636 275 173 9 36 302 7 274 7.42e-35 129
Msa1249580 MtrunA17_Chr1g0167961 29.141 326 216 6 35 352 34 352 1.26e-34 131
Msa1249580 MtrunA17_Chr7g0247991 26.225 347 242 8 35 372 32 373 1.47e-33 128
Msa1249580 MtrunA17_Chr4g0052251 30.502 259 165 8 92 339 45 299 2.00e-33 127
Msa1249580 MtrunA17_Chr8g0335411 27.095 358 225 10 35 372 32 373 2.94e-33 127
Msa1249580 MtrunA17_Chr1g0167951 27.844 334 230 5 35 363 19 346 4.40e-33 126
Msa1249580 MtrunA17_Chr4g0053251 30.508 295 171 7 64 331 2 289 2.02e-32 124
Msa1249580 MtrunA17_Chr1g0167931 26.531 343 204 5 35 372 19 318 7.08e-32 122
Msa1249580 MtrunA17_Chr3g0105281 29.344 259 162 6 70 320 34 279 3.03e-31 120
Msa1249580 MtrunA17_Chr4g0064771 34.054 185 115 3 185 366 27 207 4.08e-31 117
Msa1249580 MtrunA17_Chr1g0194321 27.523 327 205 11 70 375 20 335 4.23e-31 120
Msa1249580 MtrunA17_Chr4g0075471 35.374 147 91 2 214 356 12 158 1.95e-30 114
Msa1249580 MtrunA17_Chr4g0011311 28.571 266 174 7 35 293 32 288 5.16e-30 117
Msa1249580 MtrunA17_Chr3g0126761 38.562 153 92 2 223 375 85 235 1.43e-29 114
Msa1249580 MtrunA17_Chr5g0420731 64.286 84 29 1 24 107 1 83 2.91e-29 109
Msa1249580 MtrunA17_Chr2g0314361 58.025 81 34 0 294 374 1 81 3.87e-29 108
Msa1249580 MtrunA17_Chr3g0092531 29.304 273 181 7 68 335 4 269 6.79e-29 114
Msa1249580 MtrunA17_Chr2g0293931 33.846 195 116 7 185 368 8 200 8.87e-29 111
Msa1249580 MtrunA17_Chr7g0235981 30.500 200 132 3 179 372 129 327 1.63e-28 113
Msa1249580 MtrunA17_Chr8g0384481 27.338 278 188 5 69 336 58 331 2.24e-28 114
Msa1249580 MtrunA17_Chr5g0394071 39.844 128 66 3 227 352 45 163 2.22e-27 107
Msa1249580 MtrunA17_Chr8g0336801 36.232 138 84 2 229 363 11 147 1.70e-26 103
Msa1249580 MtrunA17_Chr7g0233661 38.095 126 71 2 227 352 19 137 2.33e-26 103
Msa1249580 MtrunA17_Chr5g0407781 25.902 305 212 8 70 372 5 297 4.61e-25 103
Msa1249580 MtrunA17_Chr1g0158011 30.952 252 155 10 111 355 5 244 6.39e-25 102
Msa1249580 MtrunA17_Chr4g0037611 31.481 162 100 4 192 352 2 153 1.08e-24 99.8
Msa1249580 MtrunA17_Chr8g0348951 27.157 313 190 10 61 354 1 294 6.82e-24 100
Msa1249580 MtrunA17_Chr4g0055911 29.073 313 193 14 62 357 4 304 9.90e-24 100
Msa1249580 MtrunA17_Chr7g0247741 31.228 285 170 13 60 331 1 272 2.80e-23 99.0
Msa1249580 MtrunA17_Chr8g0336871 33.133 166 101 3 201 363 7 165 1.22e-22 93.6
Msa1249580 MtrunA17_Chr8g0362741 27.863 262 166 7 35 293 32 273 1.85e-22 95.9
Msa1249580 MtrunA17_Chr4g0004071 28.239 301 199 9 69 360 8 300 6.77e-21 92.0
Msa1249580 MtrunA17_Chr6g0486831 27.368 285 179 11 93 353 41 321 2.06e-20 91.3
Msa1249580 MtrunA17_Chr4g0004061 28.247 308 203 11 63 360 2 301 4.77e-20 89.7
Msa1249580 MtrunA17_Chr2g0319521 36.036 111 70 1 183 293 15 124 4.92e-20 85.5
Msa1249580 MtrunA17_Chr4g0055871 26.688 311 185 9 70 357 9 299 2.74e-19 87.4
Msa1249580 MtrunA17_Chr8g0389941 25.874 286 188 11 93 357 54 336 3.50e-19 87.8
Msa1249580 MtrunA17_Chr1g0158021 28.125 224 144 7 69 285 48 261 6.33e-19 85.5
Msa1249580 MtrunA17_Chr7g0256741 28.253 269 166 9 70 323 10 266 2.88e-18 84.7
Msa1249580 MtrunA17_Chr5g0407731 23.860 285 203 8 70 352 33 305 4.47e-18 84.3
Msa1249580 MtrunA17_Chr8g0375621 62.500 56 21 0 205 260 1 56 6.33e-18 77.4
Msa1249580 MtrunA17_Chr8g0364171 36.364 110 69 1 184 293 18 126 1.36e-17 79.0
Msa1249580 MtrunA17_Chr7g0219991 41.121 107 62 1 185 291 249 354 1.43e-17 83.2
Msa1249580 MtrunA17_Chr1g0158031 34.868 152 92 4 194 341 1 149 2.79e-17 79.0
Msa1249580 MtrunA17_Chr3g0138351 25.079 315 202 12 69 362 6 307 9.54e-17 80.1
Msa1249580 MtrunA17_Chr3g0092581 30.137 146 93 4 194 335 1 141 4.95e-16 75.9
Msa1249580 MtrunA17_Chr8g0336831 25.833 240 165 5 19 252 11 243 7.08e-16 76.6
Msa1249580 MtrunA17_Chr1g0161101 40.187 107 53 3 215 320 392 488 1.10e-14 75.5
Msa1249580 MtrunA17_Chr2g0311611 40.278 72 35 2 229 293 1 71 4.00e-13 63.9
Msa1249580 MtrunA17_Chr4g0009561 22.727 308 219 12 69 362 6 308 4.21e-13 69.3
Msa1249580 MtrunA17_Chr4g0009541 26.207 145 103 3 175 316 115 258 5.38e-13 69.3
Msa1249580 MtrunA17_Chr1g0167921 32.039 103 69 1 190 292 55 156 6.66e-13 66.6
Msa1249580 MtrunA17_Chr8g0375611 50.980 51 25 0 325 375 1 51 8.72e-13 62.8
Msa1249580 MtrunA17_Chr4g0075431 25.000 156 106 3 67 220 1 147 8.85e-12 63.5
Msa1249580 MtrunA17_Chr1g0148781 24.092 303 203 12 70 353 8 302 2.07e-11 64.3
Msa1249580 MtrunA17_Chr7g0239081 38.835 103 53 3 4 105 1 94 7.32e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249580 AT1G17020.1 52.436 349 161 4 29 372 10 358 4.90e-138 397
Msa1249580 AT4G25300.1 53.161 348 159 4 29 372 9 356 2.25e-134 388
Msa1249580 AT1G17010.1 52.273 352 163 4 29 375 10 361 2.61e-134 388
Msa1249580 AT4G25310.1 53.161 348 156 4 29 372 9 353 1.01e-131 381
Msa1249580 AT1G78550.1 47.863 351 180 3 25 372 6 356 4.56e-122 357
Msa1249580 AT4G25310.2 47.262 347 150 4 29 372 9 325 5.95e-108 320
Msa1249580 AT1G78550.2 49.270 274 139 0 99 372 5 278 2.58e-102 303
Msa1249580 AT3G21420.1 42.735 351 192 4 33 374 14 364 4.56e-100 301
Msa1249580 AT2G38240.1 37.243 341 207 3 35 370 11 349 1.78e-82 256
Msa1249580 AT3G55970.1 35.447 347 213 5 36 371 14 360 3.45e-78 245
Msa1249580 AT5G05600.1 34.513 339 216 3 36 368 27 365 2.37e-77 243
Msa1249580 AT3G11180.1 36.176 340 209 4 36 368 56 394 9.38e-76 240
Msa1249580 AT3G11180.2 37.346 324 195 4 36 352 56 378 1.15e-75 240
Msa1249580 AT5G20400.1 36.364 330 201 6 35 356 8 336 8.37e-72 228
Msa1249580 AT4G25300.2 54.450 191 86 1 183 372 72 262 4.21e-71 223
Msa1249580 AT1G49390.1 35.625 320 199 5 35 348 8 326 4.06e-70 224
Msa1249580 AT5G24530.1 36.957 322 195 4 45 362 13 330 1.44e-67 217
Msa1249580 AT5G54000.2 34.743 331 206 5 35 356 8 337 2.26e-67 217
Msa1249580 AT5G20550.1 35.650 331 204 7 35 357 8 337 5.80e-67 216
Msa1249580 AT4G10490.1 32.571 350 222 7 28 371 3 344 6.59e-64 207
Msa1249580 AT2G36690.2 33.333 348 222 5 35 374 20 365 1.18e-62 205
Msa1249580 AT2G36690.1 33.333 348 222 5 35 374 20 365 1.18e-62 205
Msa1249580 AT1G49390.2 37.247 247 154 1 103 348 1 247 2.85e-62 201
Msa1249580 AT5G05600.2 36.364 264 162 3 36 293 27 290 1.05e-61 200
Msa1249580 AT4G16330.2 35.179 307 184 7 69 370 66 362 3.58e-60 198
Msa1249580 AT3G60290.1 35.694 353 203 11 35 374 15 356 4.05e-60 198
Msa1249580 AT5G54000.1 36.187 257 161 2 103 356 1 257 1.13e-59 194
Msa1249580 AT2G44800.1 34.694 343 214 8 35 371 15 353 8.28e-59 195
Msa1249580 AT3G55970.2 36.803 269 159 5 36 293 14 282 9.61e-59 193
Msa1249580 AT4G10500.1 29.888 358 233 7 19 371 1 345 5.18e-58 192
Msa1249580 AT4G22880.1 33.333 327 202 6 33 344 4 329 5.30e-57 190
Msa1249580 AT4G22880.2 33.333 327 202 6 33 344 4 329 5.30e-57 190
Msa1249580 AT4G22880.3 33.333 327 202 6 33 344 4 329 5.30e-57 190
Msa1249580 AT3G19010.1 33.233 331 186 9 69 373 27 348 3.03e-54 182
Msa1249580 AT3G19010.4 33.233 331 186 9 69 373 27 348 3.03e-54 182
Msa1249580 AT1G77330.1 36.531 271 156 3 70 332 3 265 4.54e-54 181
Msa1249580 AT1G55290.1 34.203 345 204 11 35 368 25 357 2.39e-53 181
Msa1249580 AT3G19000.1 34.098 305 175 7 69 353 31 329 2.59e-53 180
Msa1249580 AT3G13610.1 32.951 349 210 12 35 372 26 361 1.26e-52 179
Msa1249580 AT3G51240.1 31.271 291 195 3 45 331 13 302 1.11e-50 174
Msa1249580 AT5G08640.2 32.716 324 197 10 53 368 26 336 1.81e-50 172
Msa1249580 AT5G08640.1 32.716 324 197 10 53 368 26 336 1.81e-50 172
Msa1249580 AT1G12010.1 30.693 303 190 6 69 364 6 295 5.75e-50 171
Msa1249580 AT4G16330.1 35.573 253 154 4 122 370 9 256 6.30e-50 169
Msa1249580 AT4G25420.1 34.058 276 172 3 70 336 61 335 3.65e-49 170
Msa1249580 AT5G07480.1 30.523 344 212 11 47 374 24 356 8.73e-49 168
Msa1249580 AT1G62380.1 30.667 300 194 5 69 364 6 295 9.84e-49 167
Msa1249580 AT1G05010.1 29.139 302 199 5 71 364 5 299 3.82e-48 166
Msa1249580 AT5G59540.1 30.460 348 225 7 36 372 25 366 6.11e-48 166
Msa1249580 AT2G19590.1 31.683 303 182 7 69 364 10 294 1.44e-47 164
Msa1249580 AT5G43450.1 31.195 343 216 9 36 367 24 357 3.70e-47 164
Msa1249580 AT5G63590.1 36.071 280 165 7 65 337 9 281 1.46e-46 161
Msa1249580 AT3G19010.3 32.588 313 182 10 69 373 27 318 1.53e-46 161
Msa1249580 AT1G60980.1 33.003 303 185 6 47 335 36 334 2.17e-46 162
Msa1249580 AT2G30830.1 32.059 340 210 9 35 363 20 349 1.54e-45 160
Msa1249580 AT1G15550.1 28.882 322 209 8 44 354 27 339 1.83e-45 160
Msa1249580 AT5G59530.1 30.484 351 220 10 36 372 24 364 4.14e-45 159
Msa1249580 AT1G06620.1 30.678 339 217 7 35 363 26 356 5.22e-45 159
Msa1249580 AT1G06640.1 30.252 357 218 9 35 372 25 369 1.66e-44 157
Msa1249580 AT5G43440.1 29.799 349 228 8 35 372 23 365 2.62e-44 157
Msa1249580 AT5G07200.1 32.258 310 196 6 38 336 28 334 3.15e-44 157
Msa1249580 AT1G04350.1 30.286 350 222 10 35 372 21 360 3.56e-44 156
Msa1249580 AT1G04380.1 31.270 307 201 5 70 372 45 345 4.36e-44 156
Msa1249580 AT5G51810.1 32.026 306 187 8 45 339 40 335 8.48e-44 156
Msa1249580 AT3G12900.1 31.884 345 217 9 35 371 21 355 1.80e-43 154
Msa1249580 AT1G06650.2 29.310 348 215 9 35 363 25 360 2.37e-43 154
Msa1249580 AT1G80340.1 29.283 321 209 6 46 360 26 334 3.56e-43 153
Msa1249580 AT3G19000.2 34.286 245 135 7 69 293 31 269 4.61e-43 151
Msa1249580 AT3G19010.2 33.333 249 137 6 69 296 27 267 1.78e-41 147
Msa1249580 AT1G78440.1 30.031 323 195 11 59 362 2 312 2.59e-41 148
Msa1249580 AT2G30840.1 28.367 349 233 8 35 372 20 362 8.75e-40 145
Msa1249580 AT1G06645.1 28.779 344 219 10 35 363 38 370 9.66e-40 145
Msa1249580 AT4G21200.1 30.435 299 183 8 61 352 33 313 1.06e-39 144
Msa1249580 AT1G80330.1 31.081 296 186 9 69 354 48 335 1.12e-39 144
Msa1249580 AT5G63600.1 32.051 312 184 11 62 363 23 316 1.68e-39 143
Msa1249580 AT1G44090.1 32.143 280 172 6 70 336 63 337 1.75e-39 144
Msa1249580 AT1G03400.1 29.706 340 213 9 35 363 19 343 5.83e-39 142
Msa1249580 AT5G63600.2 31.949 313 184 12 62 363 23 317 1.22e-38 141
Msa1249580 AT4G25420.2 33.047 233 146 3 70 293 61 292 5.52e-38 138
Msa1249580 AT1G03410.2 29.801 302 195 7 70 361 57 351 8.36e-38 139
Msa1249580 AT5G07480.2 32.301 226 142 5 157 374 25 247 1.01e-37 136
Msa1249580 AT3G51240.2 32.719 217 143 2 117 331 3 218 1.16e-37 137
Msa1249580 AT1G03410.1 29.703 303 196 7 70 362 94 389 1.26e-37 140
Msa1249580 AT2G19590.2 31.047 277 166 7 95 364 21 279 1.08e-36 135
Msa1249580 AT1G30040.1 29.236 301 194 11 70 361 31 321 1.79e-36 135
Msa1249580 AT2G34555.1 32.013 303 182 11 70 361 27 316 3.16e-36 135
Msa1249580 AT2G30840.3 27.794 349 229 9 35 372 20 356 4.11e-36 135
Msa1249580 AT4G21690.1 27.879 330 209 9 47 361 29 344 7.51e-36 134
Msa1249580 AT1G02400.1 31.529 314 190 13 64 362 16 319 1.29e-35 133
Msa1249580 AT3G61400.1 29.191 346 217 12 35 361 24 360 1.30e-35 134
Msa1249580 AT3G50210.4 32.203 295 160 9 70 331 8 295 2.42e-35 132
Msa1249580 AT3G50210.1 32.203 295 160 9 70 331 8 295 2.42e-35 132
Msa1249580 AT3G50210.3 32.203 295 160 9 70 331 8 295 2.42e-35 132
Msa1249580 AT3G49620.1 32.394 284 169 7 70 331 34 316 2.81e-35 132
Msa1249580 AT5G12270.1 27.976 336 229 5 44 372 30 359 4.68e-35 132
Msa1249580 AT1G47990.1 27.885 312 189 11 70 362 15 309 1.58e-34 130
Msa1249580 AT2G25450.1 28.613 346 233 7 35 372 20 359 2.08e-34 130
Msa1249580 AT1G06640.2 32.967 273 156 7 35 292 25 285 3.12e-34 129
Msa1249580 AT5G51810.2 30.418 263 163 7 45 296 40 293 6.05e-34 127
Msa1249580 AT1G06640.3 32.482 274 158 7 35 293 25 286 7.30e-34 127
Msa1249580 AT1G50960.1 31.944 288 168 10 45 320 17 288 1.75e-33 127
Msa1249580 AT1G03400.2 27.446 368 213 10 35 363 19 371 1.88e-33 128
Msa1249580 AT5G63595.1 32.800 250 138 8 71 316 26 249 1.65e-32 123
Msa1249580 AT1G06650.1 30.466 279 167 7 35 298 25 291 2.26e-32 124
Msa1249580 AT5G43935.1 28.522 291 175 10 69 352 18 282 1.64e-31 121
Msa1249580 AT1G06620.2 31.111 270 161 7 35 292 26 282 2.81e-31 120
Msa1249580 AT5G59540.2 31.086 267 170 6 35 293 24 284 5.96e-31 119
Msa1249580 AT5G43450.2 31.579 266 165 8 35 292 23 279 8.83e-31 119
Msa1249580 AT3G49630.1 30.556 288 169 9 70 331 9 291 2.97e-30 119
Msa1249580 AT3G49630.3 30.996 271 164 9 79 331 22 287 1.84e-29 116
Msa1249580 AT5G63580.2 32.114 246 146 9 53 291 7 238 1.19e-28 112
Msa1249580 AT5G63580.1 32.365 241 142 9 58 291 12 238 1.28e-28 112
Msa1249580 AT1G04380.2 32.889 225 144 4 70 293 45 263 5.29e-28 111
Msa1249580 AT5G43440.2 30.075 266 172 7 35 292 23 282 1.04e-27 110
Msa1249580 AT2G30840.2 28.195 266 177 6 35 292 20 279 1.35e-27 110
Msa1249580 AT3G47190.1 27.170 265 168 7 70 320 32 285 8.90e-27 109
Msa1249580 AT1G30040.2 30.472 233 143 11 70 293 31 253 1.71e-24 101
Msa1249580 AT3G61400.2 29.562 274 169 10 35 293 24 288 2.70e-24 101
Msa1249580 AT3G46500.5 28.383 303 188 13 62 343 9 303 9.16e-24 100
Msa1249580 AT4G23340.1 32.653 245 133 11 93 320 30 259 4.18e-23 99.0
Msa1249580 AT3G50210.2 36.416 173 94 4 170 331 46 213 2.30e-22 95.5
Msa1249580 AT3G46500.7 28.467 274 171 12 62 318 9 274 1.01e-21 94.7
Msa1249580 AT5G58660.1 26.071 280 167 9 70 320 34 302 1.04e-21 95.5
Msa1249580 AT1G02400.2 31.707 246 144 12 64 295 16 251 1.85e-21 93.2
Msa1249580 AT1G14130.1 27.181 298 199 8 70 362 9 293 2.30e-21 93.6
Msa1249580 AT3G49630.2 35.119 168 98 5 170 331 56 218 8.71e-21 91.3
Msa1249580 AT1G52820.1 26.518 313 200 11 62 358 3 301 2.37e-18 85.5
Msa1249580 AT3G46490.2 28.713 303 172 13 63 336 10 297 3.09e-18 84.7
Msa1249580 AT1G14120.2 25.974 308 192 6 70 363 8 293 2.72e-16 79.3
Msa1249580 AT1G14120.1 25.974 308 192 6 70 363 8 293 2.72e-16 79.3
Msa1249580 AT1G14120.3 25.974 308 192 6 70 363 8 293 2.72e-16 79.3
Msa1249580 AT2G06960.1 34.014 147 82 5 214 360 15 146 3.02e-16 75.5
Msa1249580 AT4G22870.1 39.423 104 58 2 262 364 2 101 5.17e-16 73.9
Msa1249580 AT1G35190.1 26.144 306 196 10 63 343 5 305 6.32e-16 78.6
Msa1249580 AT1G52800.1 25.552 317 215 12 61 365 1 308 4.00e-15 75.9
Msa1249580 AT4G23340.2 28.743 167 113 4 193 354 10 175 5.15e-15 73.6
Msa1249580 AT1G35190.2 25.658 304 177 11 63 343 5 282 5.39e-15 75.5
Msa1249580 AT4G22870.2 41.379 87 47 2 262 344 40 126 3.75e-14 69.7
Msa1249580 AT3G46500.3 32.468 154 92 6 173 318 51 200 6.30e-14 70.9
Msa1249580 AT3G46500.6 31.447 159 96 6 171 318 13 169 2.45e-13 68.6
Msa1249580 AT3G46500.8 31.447 159 96 6 171 318 13 169 2.45e-13 68.6
Msa1249580 AT4G03070.1 24.364 275 180 9 93 353 41 301 3.16e-12 67.4
Msa1249580 AT4G16765.6 27.778 198 130 6 171 357 45 240 3.24e-12 66.2
Msa1249580 AT4G16765.1 27.778 198 130 6 171 357 45 240 3.24e-12 66.2
Msa1249580 AT4G16765.2 27.778 198 130 6 171 357 45 240 3.24e-12 66.2
Msa1249580 AT1G52820.2 27.419 248 150 11 62 293 3 236 3.26e-11 63.5
Msa1249580 AT4G16765.3 29.814 161 100 6 171 320 45 203 3.46e-11 63.2
Msa1249580 AT3G46480.1 29.480 173 108 6 183 343 93 263 4.64e-11 63.5
Msa1249580 AT3G46500.2 31.061 132 82 4 177 300 53 183 7.32e-11 61.2

Find 69 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCAGACGAACACAAAT+TGG 0.265125 8_2:+44515086 Msa1249580:CDS
GGAATACTTGGAAATAAGTT+TGG 0.266243 8_2:-44515159 None:intergenic
TCACGGAGTCGATCCTTTAT+TGG 0.284656 8_2:+44514954 Msa1249580:CDS
GCATTTGTGAGAGGCTTAAT+AGG 0.286844 8_2:-44515848 None:intergenic
CAAGTATTCCCCAACCATTC+AGG 0.301424 8_2:+44515172 Msa1249580:CDS
CAAAGAATGGGGTTTCTTCC+AGG 0.312719 8_2:+44514586 Msa1249580:CDS
CTGAATGGTTGGGGAATACT+TGG 0.360937 8_2:-44515171 None:intergenic
AACATATCGTTCTGGAACTT+TGG 0.375956 8_2:-44514438 None:intergenic
TCTCTTGGTGCCTTCTGTCC+AGG 0.394890 8_2:+44514394 Msa1249580:CDS
CTCCAACTCAATGAAATAGA+AGG 0.399689 8_2:+44515794 Msa1249580:CDS
ATCACAGAAACCAGGAGATA+TGG 0.403808 8_2:+44515041 Msa1249580:CDS
GGCCTTCTATTTCATTGAGT+TGG 0.410796 8_2:-44515796 None:intergenic
TGCAGCAATGGATTCAGAAA+TGG 0.417088 8_2:+44514352 Msa1249580:CDS
CGATCATGCATGCAAAGAAT+GGG 0.419677 8_2:+44514574 Msa1249580:CDS
CGATATCAATAACATTTGCT+TGG 0.425838 8_2:-44514316 None:intergenic
TTCATTGAGTTGGAGAAGAA+TGG 0.432192 8_2:-44515786 None:intergenic
TGGGTTGCTTTACTAGCTCC+TGG 0.435412 8_2:-44514412 None:intergenic
TCGATCATGCATGCAAAGAA+TGG 0.447725 8_2:+44514573 Msa1249580:CDS
GGGAAAGAACCTGAATGGTT+GGG 0.455953 8_2:-44515181 None:intergenic
CCAGGAGATATGGAAGGTTT+CGG 0.455975 8_2:+44515051 Msa1249580:CDS
TTTGGATTTCTCATGTATGA+TGG 0.468214 8_2:-44515141 None:intergenic
TTGCTAGAGTTATTTGAAGA+GGG 0.468917 8_2:+44515671 Msa1249580:CDS
TCGTTCTGGAACTTTGGTGA+TGG 0.474377 8_2:-44514432 None:intergenic
CCAAGACTTCTTCAATCTGC+CGG 0.479805 8_2:+44514999 Msa1249580:CDS
CCGGCAGATTGAAGAAGTCT+TGG 0.484829 8_2:-44514999 None:intergenic
TAGATACTACAGAAGGGTCT+TGG 0.485325 8_2:-44514469 None:intergenic
GGAGTAATAAGGCTTGGTGC+TGG 0.491129 8_2:-44516325 None:intergenic
TATTTCTCACGAAAGCTTGA+AGG 0.494454 8_2:+44516400 Msa1249580:CDS
TCAGAAATGGTAAAGAAGCT+TGG 0.500619 8_2:+44514365 Msa1249580:CDS
AGTGTGGAAGATTTCTTCAA+AGG 0.508864 8_2:+44516376 Msa1249580:CDS
CCGAAACCTTCCATATCTCC+TGG 0.509737 8_2:-44515051 None:intergenic
CGTTCTGGAACTTTGGTGAT+GGG 0.517955 8_2:-44514431 None:intergenic
AGGGAAAGAACCTGAATGGT+TGG 0.529218 8_2:-44515182 None:intergenic
AACTTCTGCAAATCGATGAC+TGG 0.531193 8_2:-44514515 None:intergenic
AGACGAACACAAATTGGAAT+GGG 0.534962 8_2:+44515092 Msa1249580:CDS
GGAAAGAACCTGAATGGTTG+GGG 0.543399 8_2:-44515180 None:intergenic
ATTTGCTTGGATCACTTCCA+TGG 0.543420 8_2:-44514303 None:intergenic
GAAGCTTGGAACCTCTCTCT+TGG 0.544545 8_2:+44514379 Msa1249580:CDS
TGAGTTGGAGAAGAATGGTA+AGG 0.545815 8_2:-44515781 None:intergenic
CAGACGAACACAAATTGGAA+TGG 0.548974 8_2:+44515091 Msa1249580:CDS
AAGTTATTGTCTGAAGAAGA+TGG 0.549063 8_2:+44514533 Msa1249580:CDS
CGGAGTCGATCCTTTATTGG+TGG 0.550577 8_2:+44514957 Msa1249580:CDS
ATTGCTAGAGTTATTTGAAG+AGG 0.551019 8_2:+44515670 Msa1249580:CDS
TTTACTAGCTCCTGGACAGA+AGG 0.562789 8_2:-44514404 None:intergenic
CTAATGTTGTTGAACACTGC+AGG 0.569836 8_2:-44516355 None:intergenic
AAGGAGGGAAAGAACCTGAA+TGG 0.570977 8_2:-44515186 None:intergenic
ATAACAAAAGCATTTGTGAG+AGG 0.574059 8_2:-44515857 None:intergenic
GGACTCAATCCTCATTCTGA+TGG 0.574193 8_2:+44515752 Msa1249580:CDS
TATTGGCAGTTGATCAATCA+CGG 0.577096 8_2:+44514937 Msa1249580:intron
CAATCTAGCACTGTGAAATG+TGG 0.587201 8_2:-44516287 None:intergenic
ATTGTGCTAGATACTACAGA+AGG 0.595612 8_2:-44514476 None:intergenic
AGCAACAATTAACTCAGAGA+AGG 0.603268 8_2:+44516249 Msa1249580:CDS
GACAGAAGGCACCAAGAGAG+AGG 0.606593 8_2:-44514390 None:intergenic
CTAGAGTTATTTGAAGAGGG+AGG 0.611828 8_2:+44515674 Msa1249580:CDS
CAATTAACTCAGAGAAGGAG+AGG 0.612359 8_2:+44516254 Msa1249580:CDS
GAGTTGGAGAAGAATGGTAA+GGG 0.618943 8_2:-44515780 None:intergenic
AGCACTGTGAAATGTGGCAA+CGG 0.620527 8_2:-44516281 None:intergenic
AGACTTCTTCAATCTGCCGG+TGG 0.639114 8_2:+44515002 Msa1249580:CDS
GTTCGACAGATATTGACGAA+TGG 0.645000 8_2:+44516202 Msa1249580:intron
AGGGCAGTACCATCAGAATG+AGG 0.647525 8_2:-44515761 None:intergenic
CAGAAACCAGGAGATATGGA+AGG 0.650049 8_2:+44515045 Msa1249580:CDS
AAGAGGGAGGTCAAGCAATG+AGG 0.655282 8_2:+44515687 Msa1249580:CDS
GATCATGCATGCAAAGAATG+GGG 0.659038 8_2:+44514575 Msa1249580:CDS
TTGTGCTAGATACTACAGAA+GGG 0.666114 8_2:-44514475 None:intergenic
AATTGTACATTGATGACATG+AGG 0.667705 8_2:+44516425 Msa1249580:CDS
AAATCGATGACTGGAACTTG+TGG 0.682620 8_2:-44514506 None:intergenic
CAACATTGGAGACATGCTAG+AGG 0.685085 8_2:+44515880 Msa1249580:CDS
AAAATATTATCACAGAAACC+AGG 0.686621 8_2:+44515033 Msa1249580:CDS
AGTGTTCAACAACATTAGTG+TGG 0.716048 8_2:+44516360 Msa1249580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATACAAAAAAAAAAAAA+AGG - chr8_2:44514627-44514646 None:intergenic 10.0%
!!! AAGTCAATAATTTTATAATA+AGG - chr8_2:44514731-44514750 None:intergenic 10.0%
!! AAATAATACATAAAAATAGA+AGG - chr8_2:44515208-44515227 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_2:44515443-44515462 None:intergenic 10.0%
!! GATATACAAAAAAAAAAAAA+AGG - chr8_2:44514627-44514646 None:intergenic 10.0%
!!! AAGTCAATAATTTTATAATA+AGG - chr8_2:44514731-44514750 None:intergenic 10.0%
!! AAATAATACATAAAAATAGA+AGG - chr8_2:44515208-44515227 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_2:44515443-44515462 None:intergenic 10.0%
!!! TATATGATTTATGGTTTTAT+TGG + chr8_2:44514704-44514723 Msa1249580:intron 15.0%
!! AAATATATAAAATGATGAAC+AGG - chr8_2:44515540-44515559 None:intergenic 15.0%
!! TTATAAATTGTCAATCATAA+TGG - chr8_2:44516009-44516028 None:intergenic 15.0%
!! GTAATATAATATAGTTACTA+GGG - chr8_2:44516105-44516124 None:intergenic 15.0%
!! TGTAATATAATATAGTTACT+AGG - chr8_2:44516106-44516125 None:intergenic 15.0%
!!! TATATGATTTATGGTTTTAT+TGG + chr8_2:44514704-44514723 Msa1249580:intron 15.0%
!! AAATATATAAAATGATGAAC+AGG - chr8_2:44515540-44515559 None:intergenic 15.0%
!! TTATAAATTGTCAATCATAA+TGG - chr8_2:44516009-44516028 None:intergenic 15.0%
!! GTAATATAATATAGTTACTA+GGG - chr8_2:44516105-44516124 None:intergenic 15.0%
!! TGTAATATAATATAGTTACT+AGG - chr8_2:44516106-44516125 None:intergenic 15.0%
!! CAAAAAAAAAAAAAAGGAGA+CGG - chr8_2:44514621-44514640 None:intergenic 20.0%
!! TTAATTATTCGATGAAACTT+AGG + chr8_2:44514785-44514804 Msa1249580:intron 20.0%
!! TAATTATTCGATGAAACTTA+GGG + chr8_2:44514786-44514805 Msa1249580:intron 20.0%
!! ATTAAGCCTTTCTTATAATA+AGG + chr8_2:44514880-44514899 Msa1249580:intron 20.0%
!!! AACCATGATTTTGAAATTAT+TGG + chr8_2:44514920-44514939 Msa1249580:intron 20.0%
!!! TTAAAATTTTCCACCAATAA+AGG - chr8_2:44514970-44514989 None:intergenic 20.0%
!! AATACATAAAAATAGAAGGA+GGG - chr8_2:44515204-44515223 None:intergenic 20.0%
!! TAATACATAAAAATAGAAGG+AGG - chr8_2:44515205-44515224 None:intergenic 20.0%
!!! AAATTTCATCCAAAATTTTG+AGG - chr8_2:44515316-44515335 None:intergenic 20.0%
!!! CACATTAATTTTTTTGCTTT+AGG + chr8_2:44515492-44515511 Msa1249580:intron 20.0%
!!! TTCCATCTTTTTTTATTTGA+AGG - chr8_2:44515820-44515839 None:intergenic 20.0%
!! AAATAAAAAAAGATGGAATG+TGG + chr8_2:44515822-44515841 Msa1249580:CDS 20.0%
!! CAAAAAAAAAAAAAAGGAGA+CGG - chr8_2:44514621-44514640 None:intergenic 20.0%
!! TTAATTATTCGATGAAACTT+AGG + chr8_2:44514785-44514804 Msa1249580:intron 20.0%
!! TAATTATTCGATGAAACTTA+GGG + chr8_2:44514786-44514805 Msa1249580:intron 20.0%
!! ATTAAGCCTTTCTTATAATA+AGG + chr8_2:44514880-44514899 Msa1249580:intron 20.0%
!!! AACCATGATTTTGAAATTAT+TGG + chr8_2:44514920-44514939 Msa1249580:intron 20.0%
!!! TTAAAATTTTCCACCAATAA+AGG - chr8_2:44514970-44514989 None:intergenic 20.0%
!! AATACATAAAAATAGAAGGA+GGG - chr8_2:44515204-44515223 None:intergenic 20.0%
!! TAATACATAAAAATAGAAGG+AGG - chr8_2:44515205-44515224 None:intergenic 20.0%
!!! AAATTTCATCCAAAATTTTG+AGG - chr8_2:44515316-44515335 None:intergenic 20.0%
!!! CACATTAATTTTTTTGCTTT+AGG + chr8_2:44515492-44515511 Msa1249580:intron 20.0%
!!! TTCCATCTTTTTTTATTTGA+AGG - chr8_2:44515820-44515839 None:intergenic 20.0%
!! AAATAAAAAAAGATGGAATG+TGG + chr8_2:44515822-44515841 Msa1249580:CDS 20.0%
!!! ATTATTTTTCTTTGCAGCAA+TGG + chr8_2:44514340-44514359 Msa1249580:CDS 25.0%
! AATTATTCGATGAAACTTAG+GGG + chr8_2:44514787-44514806 Msa1249580:intron 25.0%
! ACAACTCCTTATTATAAGAA+AGG - chr8_2:44514889-44514908 None:intergenic 25.0%
! AAAATCATGGTTTATGTTAC+CGG - chr8_2:44514912-44514931 None:intergenic 25.0%
! TGCCAATAATTTCAAAATCA+TGG - chr8_2:44514925-44514944 None:intergenic 25.0%
! AAAATATTATCACAGAAACC+AGG + chr8_2:44515033-44515052 Msa1249580:CDS 25.0%
!!! AAAAGTATTTGAGACCTTTT+TGG - chr8_2:44515384-44515403 None:intergenic 25.0%
!! AAAAAGGTCTCAAATACTTT+TGG + chr8_2:44515383-44515402 Msa1249580:intron 25.0%
!! AATACTTTTGGTCATACTTT+TGG + chr8_2:44515395-44515414 Msa1249580:intron 25.0%
!! TTGGTCATGAATTCAAATTT+TGG + chr8_2:44515414-44515433 Msa1249580:intron 25.0%
!!! ACTCTAGCAATTCATTTTTT+GGG - chr8_2:44515661-44515680 None:intergenic 25.0%
!!! AACTCTAGCAATTCATTTTT+TGG - chr8_2:44515662-44515681 None:intergenic 25.0%
!!! AATGCTTTTGTTATCAACAT+TGG + chr8_2:44515866-44515885 Msa1249580:CDS 25.0%
!! GTTTCATTCAAATTTTTCGT+TGG - chr8_2:44516042-44516061 None:intergenic 25.0%
!!! ATTATTTTTCTTTGCAGCAA+TGG + chr8_2:44514340-44514359 Msa1249580:CDS 25.0%
! AATTATTCGATGAAACTTAG+GGG + chr8_2:44514787-44514806 Msa1249580:intron 25.0%
! ACAACTCCTTATTATAAGAA+AGG - chr8_2:44514889-44514908 None:intergenic 25.0%
! AAAATCATGGTTTATGTTAC+CGG - chr8_2:44514912-44514931 None:intergenic 25.0%
! TGCCAATAATTTCAAAATCA+TGG - chr8_2:44514925-44514944 None:intergenic 25.0%
! AAAATATTATCACAGAAACC+AGG + chr8_2:44515033-44515052 Msa1249580:CDS 25.0%
!!! AAAAGTATTTGAGACCTTTT+TGG - chr8_2:44515384-44515403 None:intergenic 25.0%
!! AAAAAGGTCTCAAATACTTT+TGG + chr8_2:44515383-44515402 Msa1249580:intron 25.0%
!! AATACTTTTGGTCATACTTT+TGG + chr8_2:44515395-44515414 Msa1249580:intron 25.0%
!! TTGGTCATGAATTCAAATTT+TGG + chr8_2:44515414-44515433 Msa1249580:intron 25.0%
!!! ACTCTAGCAATTCATTTTTT+GGG - chr8_2:44515661-44515680 None:intergenic 25.0%
!!! AACTCTAGCAATTCATTTTT+TGG - chr8_2:44515662-44515681 None:intergenic 25.0%
!!! AATGCTTTTGTTATCAACAT+TGG + chr8_2:44515866-44515885 Msa1249580:CDS 25.0%
!! GTTTCATTCAAATTTTTCGT+TGG - chr8_2:44516042-44516061 None:intergenic 25.0%
CGATATCAATAACATTTGCT+TGG - chr8_2:44514319-44514338 None:intergenic 30.0%
AAGTTATTGTCTGAAGAAGA+TGG + chr8_2:44514533-44514552 Msa1249580:CDS 30.0%
ATGGTTGCGTATATGATTTA+TGG + chr8_2:44514695-44514714 Msa1249580:intron 30.0%
ATTATTCGATGAAACTTAGG+GGG + chr8_2:44514788-44514807 Msa1249580:intron 30.0%
TCTTATAATAAGGAGTTGTC+CGG + chr8_2:44514890-44514909 Msa1249580:intron 30.0%
! AATATTTTCTTCTCTTCCAC+CGG - chr8_2:44515021-44515040 None:intergenic 30.0%
TTTGGATTTCTCATGTATGA+TGG - chr8_2:44515144-44515163 None:intergenic 30.0%
GGAATACTTGGAAATAAGTT+TGG - chr8_2:44515162-44515181 None:intergenic 30.0%
! ATTTAAGACAGTTCATCATC+AGG + chr8_2:44515250-44515269 Msa1249580:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_2:44515367-44515386 Msa1249580:intron 30.0%
TATAAAATGATGAACAGGAC+CGG - chr8_2:44515535-44515554 None:intergenic 30.0%
ATTGCTAGAGTTATTTGAAG+AGG + chr8_2:44515670-44515689 Msa1249580:CDS 30.0%
TTGCTAGAGTTATTTGAAGA+GGG + chr8_2:44515671-44515690 Msa1249580:CDS 30.0%
GGCCTTCAAATAAAAAAAGA+TGG + chr8_2:44515815-44515834 Msa1249580:CDS 30.0%
!! ATAACAAAAGCATTTGTGAG+AGG - chr8_2:44515860-44515879 None:intergenic 30.0%
! CAAGTGTGTAACTTTAAAAG+TGG + chr8_2:44515952-44515971 Msa1249580:intron 30.0%
! AATTGTACATTGATGACATG+AGG + chr8_2:44516425-44516444 Msa1249580:CDS 30.0%
CGATATCAATAACATTTGCT+TGG - chr8_2:44514319-44514338 None:intergenic 30.0%
AAGTTATTGTCTGAAGAAGA+TGG + chr8_2:44514533-44514552 Msa1249580:CDS 30.0%
ATGGTTGCGTATATGATTTA+TGG + chr8_2:44514695-44514714 Msa1249580:intron 30.0%
ATTATTCGATGAAACTTAGG+GGG + chr8_2:44514788-44514807 Msa1249580:intron 30.0%
TCTTATAATAAGGAGTTGTC+CGG + chr8_2:44514890-44514909 Msa1249580:intron 30.0%
! AATATTTTCTTCTCTTCCAC+CGG - chr8_2:44515021-44515040 None:intergenic 30.0%
TTTGGATTTCTCATGTATGA+TGG - chr8_2:44515144-44515163 None:intergenic 30.0%
GGAATACTTGGAAATAAGTT+TGG - chr8_2:44515162-44515181 None:intergenic 30.0%
! ATTTAAGACAGTTCATCATC+AGG + chr8_2:44515250-44515269 Msa1249580:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_2:44515367-44515386 Msa1249580:intron 30.0%
TATAAAATGATGAACAGGAC+CGG - chr8_2:44515535-44515554 None:intergenic 30.0%
ATTGCTAGAGTTATTTGAAG+AGG + chr8_2:44515670-44515689 Msa1249580:CDS 30.0%
TTGCTAGAGTTATTTGAAGA+GGG + chr8_2:44515671-44515690 Msa1249580:CDS 30.0%
GGCCTTCAAATAAAAAAAGA+TGG + chr8_2:44515815-44515834 Msa1249580:CDS 30.0%
!! ATAACAAAAGCATTTGTGAG+AGG - chr8_2:44515860-44515879 None:intergenic 30.0%
! CAAGTGTGTAACTTTAAAAG+TGG + chr8_2:44515952-44515971 Msa1249580:intron 30.0%
! AATTGTACATTGATGACATG+AGG + chr8_2:44516425-44516444 Msa1249580:CDS 30.0%
TCAGAAATGGTAAAGAAGCT+TGG + chr8_2:44514365-44514384 Msa1249580:CDS 35.0%
!! AACATATCGTTCTGGAACTT+TGG - chr8_2:44514441-44514460 None:intergenic 35.0%
! TTTTGCTGAACATATCGTTC+TGG - chr8_2:44514449-44514468 None:intergenic 35.0%
TTGTGCTAGATACTACAGAA+GGG - chr8_2:44514478-44514497 None:intergenic 35.0%
ATTGTGCTAGATACTACAGA+AGG - chr8_2:44514479-44514498 None:intergenic 35.0%
TATACGCAACCATTGAGATT+GGG - chr8_2:44514688-44514707 None:intergenic 35.0%
ATATACGCAACCATTGAGAT+TGG - chr8_2:44514689-44514708 None:intergenic 35.0%
! CTTTTCCAAAGTTGCGATTT+TGG - chr8_2:44514841-44514860 None:intergenic 35.0%
! ATCGCAACTTTGGAAAAGTT+AGG + chr8_2:44514843-44514862 Msa1249580:intron 35.0%
TATTGGCAGTTGATCAATCA+CGG + chr8_2:44514937-44514956 Msa1249580:intron 35.0%
TGTATCAGACGAACACAAAT+TGG + chr8_2:44515086-44515105 Msa1249580:CDS 35.0%
AGACGAACACAAATTGGAAT+GGG + chr8_2:44515092-44515111 Msa1249580:CDS 35.0%
!!! GGCTTTAGACCTCAAAATTT+TGG + chr8_2:44515304-44515323 Msa1249580:intron 35.0%
!!! TCCAATGACTTTTTCTGGTT+GGG - chr8_2:44515735-44515754 None:intergenic 35.0%
!! TTGAGTCCAATGACTTTTTC+TGG - chr8_2:44515740-44515759 None:intergenic 35.0%
!! TTCATTGAGTTGGAGAAGAA+TGG - chr8_2:44515789-44515808 None:intergenic 35.0%
CTCCAACTCAATGAAATAGA+AGG + chr8_2:44515794-44515813 Msa1249580:CDS 35.0%
AGCAACAATTAACTCAGAGA+AGG + chr8_2:44516249-44516268 Msa1249580:CDS 35.0%
!!! GTTTTAGGAGTAATAAGGCT+TGG - chr8_2:44516334-44516353 None:intergenic 35.0%
!!! CAGGAGTTTTAGGAGTAATA+AGG - chr8_2:44516339-44516358 None:intergenic 35.0%
AGTGTTCAACAACATTAGTG+TGG + chr8_2:44516360-44516379 Msa1249580:CDS 35.0%
AGTGTGGAAGATTTCTTCAA+AGG + chr8_2:44516376-44516395 Msa1249580:CDS 35.0%
TATTTCTCACGAAAGCTTGA+AGG + chr8_2:44516400-44516419 Msa1249580:CDS 35.0%
TCAGAAATGGTAAAGAAGCT+TGG + chr8_2:44514365-44514384 Msa1249580:CDS 35.0%
!! AACATATCGTTCTGGAACTT+TGG - chr8_2:44514441-44514460 None:intergenic 35.0%
! TTTTGCTGAACATATCGTTC+TGG - chr8_2:44514449-44514468 None:intergenic 35.0%
TTGTGCTAGATACTACAGAA+GGG - chr8_2:44514478-44514497 None:intergenic 35.0%
ATTGTGCTAGATACTACAGA+AGG - chr8_2:44514479-44514498 None:intergenic 35.0%
TATACGCAACCATTGAGATT+GGG - chr8_2:44514688-44514707 None:intergenic 35.0%
ATATACGCAACCATTGAGAT+TGG - chr8_2:44514689-44514708 None:intergenic 35.0%
! CTTTTCCAAAGTTGCGATTT+TGG - chr8_2:44514841-44514860 None:intergenic 35.0%
! ATCGCAACTTTGGAAAAGTT+AGG + chr8_2:44514843-44514862 Msa1249580:intron 35.0%
TATTGGCAGTTGATCAATCA+CGG + chr8_2:44514937-44514956 Msa1249580:intron 35.0%
TGTATCAGACGAACACAAAT+TGG + chr8_2:44515086-44515105 Msa1249580:CDS 35.0%
AGACGAACACAAATTGGAAT+GGG + chr8_2:44515092-44515111 Msa1249580:CDS 35.0%
!!! GGCTTTAGACCTCAAAATTT+TGG + chr8_2:44515304-44515323 Msa1249580:intron 35.0%
!!! TCCAATGACTTTTTCTGGTT+GGG - chr8_2:44515735-44515754 None:intergenic 35.0%
!! TTGAGTCCAATGACTTTTTC+TGG - chr8_2:44515740-44515759 None:intergenic 35.0%
!! TTCATTGAGTTGGAGAAGAA+TGG - chr8_2:44515789-44515808 None:intergenic 35.0%
CTCCAACTCAATGAAATAGA+AGG + chr8_2:44515794-44515813 Msa1249580:CDS 35.0%
AGCAACAATTAACTCAGAGA+AGG + chr8_2:44516249-44516268 Msa1249580:CDS 35.0%
!!! GTTTTAGGAGTAATAAGGCT+TGG - chr8_2:44516334-44516353 None:intergenic 35.0%
!!! CAGGAGTTTTAGGAGTAATA+AGG - chr8_2:44516339-44516358 None:intergenic 35.0%
AGTGTTCAACAACATTAGTG+TGG + chr8_2:44516360-44516379 Msa1249580:CDS 35.0%
AGTGTGGAAGATTTCTTCAA+AGG + chr8_2:44516376-44516395 Msa1249580:CDS 35.0%
TATTTCTCACGAAAGCTTGA+AGG + chr8_2:44516400-44516419 Msa1249580:CDS 35.0%
! TGCAGCAATGGATTCAGAAA+TGG + chr8_2:44514352-44514371 Msa1249580:CDS 40.0%
TAGATACTACAGAAGGGTCT+TGG - chr8_2:44514472-44514491 None:intergenic 40.0%
AAATCGATGACTGGAACTTG+TGG - chr8_2:44514509-44514528 None:intergenic 40.0%
AACTTCTGCAAATCGATGAC+TGG - chr8_2:44514518-44514537 None:intergenic 40.0%
TCGATCATGCATGCAAAGAA+TGG + chr8_2:44514573-44514592 Msa1249580:CDS 40.0%
CGATCATGCATGCAAAGAAT+GGG + chr8_2:44514574-44514593 Msa1249580:CDS 40.0%
GATCATGCATGCAAAGAATG+GGG + chr8_2:44514575-44514594 Msa1249580:CDS 40.0%
TGTATGAGTCCCAATCTCAA+TGG + chr8_2:44514676-44514695 Msa1249580:intron 40.0%
GATTGCCAAAATCGCAACTT+TGG + chr8_2:44514833-44514852 Msa1249580:intron 40.0%
! GCAACTTTGGAAAAGTTAGG+AGG + chr8_2:44514846-44514865 Msa1249580:intron 40.0%
ATCACAGAAACCAGGAGATA+TGG + chr8_2:44515041-44515060 Msa1249580:CDS 40.0%
CAGACGAACACAAATTGGAA+TGG + chr8_2:44515091-44515110 Msa1249580:CDS 40.0%
CTAGAGTTATTTGAAGAGGG+AGG + chr8_2:44515674-44515693 Msa1249580:CDS 40.0%
!!! CCAATGACTTTTTCTGGTTG+GGG - chr8_2:44515734-44515753 None:intergenic 40.0%
!! GTCCAATGACTTTTTCTGGT+TGG - chr8_2:44515736-44515755 None:intergenic 40.0%
GAGTTGGAGAAGAATGGTAA+GGG - chr8_2:44515783-44515802 None:intergenic 40.0%
! TGAGTTGGAGAAGAATGGTA+AGG - chr8_2:44515784-44515803 None:intergenic 40.0%
GGCCTTCTATTTCATTGAGT+TGG - chr8_2:44515799-44515818 None:intergenic 40.0%
GCATTTGTGAGAGGCTTAAT+AGG - chr8_2:44515851-44515870 None:intergenic 40.0%
GTTCGACAGATATTGACGAA+TGG + chr8_2:44516202-44516221 Msa1249580:intron 40.0%
CAATTAACTCAGAGAAGGAG+AGG + chr8_2:44516254-44516273 Msa1249580:CDS 40.0%
CAATCTAGCACTGTGAAATG+TGG - chr8_2:44516290-44516309 None:intergenic 40.0%
! TTGAACACTGCAGGAGTTTT+AGG - chr8_2:44516349-44516368 None:intergenic 40.0%
CTAATGTTGTTGAACACTGC+AGG - chr8_2:44516358-44516377 None:intergenic 40.0%
! TGCAGCAATGGATTCAGAAA+TGG + chr8_2:44514352-44514371 Msa1249580:CDS 40.0%
TAGATACTACAGAAGGGTCT+TGG - chr8_2:44514472-44514491 None:intergenic 40.0%
AAATCGATGACTGGAACTTG+TGG - chr8_2:44514509-44514528 None:intergenic 40.0%
AACTTCTGCAAATCGATGAC+TGG - chr8_2:44514518-44514537 None:intergenic 40.0%
TCGATCATGCATGCAAAGAA+TGG + chr8_2:44514573-44514592 Msa1249580:CDS 40.0%
CGATCATGCATGCAAAGAAT+GGG + chr8_2:44514574-44514593 Msa1249580:CDS 40.0%
GATCATGCATGCAAAGAATG+GGG + chr8_2:44514575-44514594 Msa1249580:CDS 40.0%
TGTATGAGTCCCAATCTCAA+TGG + chr8_2:44514676-44514695 Msa1249580:intron 40.0%
GATTGCCAAAATCGCAACTT+TGG + chr8_2:44514833-44514852 Msa1249580:intron 40.0%
! GCAACTTTGGAAAAGTTAGG+AGG + chr8_2:44514846-44514865 Msa1249580:intron 40.0%
ATCACAGAAACCAGGAGATA+TGG + chr8_2:44515041-44515060 Msa1249580:CDS 40.0%
CAGACGAACACAAATTGGAA+TGG + chr8_2:44515091-44515110 Msa1249580:CDS 40.0%
CTAGAGTTATTTGAAGAGGG+AGG + chr8_2:44515674-44515693 Msa1249580:CDS 40.0%
!!! CCAATGACTTTTTCTGGTTG+GGG - chr8_2:44515734-44515753 None:intergenic 40.0%
!! GTCCAATGACTTTTTCTGGT+TGG - chr8_2:44515736-44515755 None:intergenic 40.0%
GAGTTGGAGAAGAATGGTAA+GGG - chr8_2:44515783-44515802 None:intergenic 40.0%
! TGAGTTGGAGAAGAATGGTA+AGG - chr8_2:44515784-44515803 None:intergenic 40.0%
GGCCTTCTATTTCATTGAGT+TGG - chr8_2:44515799-44515818 None:intergenic 40.0%
GCATTTGTGAGAGGCTTAAT+AGG - chr8_2:44515851-44515870 None:intergenic 40.0%
GTTCGACAGATATTGACGAA+TGG + chr8_2:44516202-44516221 Msa1249580:intron 40.0%
CAATTAACTCAGAGAAGGAG+AGG + chr8_2:44516254-44516273 Msa1249580:CDS 40.0%
CAATCTAGCACTGTGAAATG+TGG - chr8_2:44516290-44516309 None:intergenic 40.0%
! TTGAACACTGCAGGAGTTTT+AGG - chr8_2:44516349-44516368 None:intergenic 40.0%
CTAATGTTGTTGAACACTGC+AGG - chr8_2:44516358-44516377 None:intergenic 40.0%
TTTACTAGCTCCTGGACAGA+AGG - chr8_2:44514407-44514426 None:intergenic 45.0%
!! CGTTCTGGAACTTTGGTGAT+GGG - chr8_2:44514434-44514453 None:intergenic 45.0%
!! TCGTTCTGGAACTTTGGTGA+TGG - chr8_2:44514435-44514454 None:intergenic 45.0%
CAAAGAATGGGGTTTCTTCC+AGG + chr8_2:44514586-44514605 Msa1249580:CDS 45.0%
TCACGGAGTCGATCCTTTAT+TGG + chr8_2:44514954-44514973 Msa1249580:CDS 45.0%
CCAAGACTTCTTCAATCTGC+CGG + chr8_2:44514999-44515018 Msa1249580:CDS 45.0%
CAGAAACCAGGAGATATGGA+AGG + chr8_2:44515045-44515064 Msa1249580:CDS 45.0%
CCAGGAGATATGGAAGGTTT+CGG + chr8_2:44515051-44515070 Msa1249580:CDS 45.0%
CTGAATGGTTGGGGAATACT+TGG - chr8_2:44515174-44515193 None:intergenic 45.0%
CAAGTATTCCCCAACCATTC+AGG + chr8_2:44515172-44515191 Msa1249580:CDS 45.0%
GGAAAGAACCTGAATGGTTG+GGG - chr8_2:44515183-44515202 None:intergenic 45.0%
GGGAAAGAACCTGAATGGTT+GGG - chr8_2:44515184-44515203 None:intergenic 45.0%
AGGGAAAGAACCTGAATGGT+TGG - chr8_2:44515185-44515204 None:intergenic 45.0%
AAGGAGGGAAAGAACCTGAA+TGG - chr8_2:44515189-44515208 None:intergenic 45.0%
AGACAGTTCATCATCAGGAC+CGG + chr8_2:44515255-44515274 Msa1249580:intron 45.0%
!! GTTTGGGTTTGTTGACCCTT+AGG - chr8_2:44515281-44515300 None:intergenic 45.0%
AGGGTCAACAAACCCAAACA+AGG + chr8_2:44515282-44515301 Msa1249580:intron 45.0%
GGGTCAACAAACCCAAACAA+GGG + chr8_2:44515283-44515302 Msa1249580:intron 45.0%
! GAGGTCTAAAGCCCTTGTTT+GGG - chr8_2:44515297-44515316 None:intergenic 45.0%
! TGAGGTCTAAAGCCCTTGTT+TGG - chr8_2:44515298-44515317 None:intergenic 45.0%
GGCCTCTTAATCTGTTATGC+CGG + chr8_2:44515513-44515532 Msa1249580:intron 45.0%
GACCGGCATAACAGATTAAG+AGG - chr8_2:44515518-44515537 None:intergenic 45.0%
!!! ACTTTTTCTGGTTGGGGACA+AGG - chr8_2:44515728-44515747 None:intergenic 45.0%
CCCCAACCAGAAAAAGTCAT+TGG + chr8_2:44515731-44515750 Msa1249580:CDS 45.0%
GGACTCAATCCTCATTCTGA+TGG + chr8_2:44515752-44515771 Msa1249580:CDS 45.0%
CAACATTGGAGACATGCTAG+AGG + chr8_2:44515880-44515899 Msa1249580:CDS 45.0%
AGCACTGTGAAATGTGGCAA+CGG - chr8_2:44516284-44516303 None:intergenic 45.0%
TTTACTAGCTCCTGGACAGA+AGG - chr8_2:44514407-44514426 None:intergenic 45.0%
!! CGTTCTGGAACTTTGGTGAT+GGG - chr8_2:44514434-44514453 None:intergenic 45.0%
!! TCGTTCTGGAACTTTGGTGA+TGG - chr8_2:44514435-44514454 None:intergenic 45.0%
CAAAGAATGGGGTTTCTTCC+AGG + chr8_2:44514586-44514605 Msa1249580:CDS 45.0%
TCACGGAGTCGATCCTTTAT+TGG + chr8_2:44514954-44514973 Msa1249580:CDS 45.0%
CCAAGACTTCTTCAATCTGC+CGG + chr8_2:44514999-44515018 Msa1249580:CDS 45.0%
CAGAAACCAGGAGATATGGA+AGG + chr8_2:44515045-44515064 Msa1249580:CDS 45.0%
CCAGGAGATATGGAAGGTTT+CGG + chr8_2:44515051-44515070 Msa1249580:CDS 45.0%
CTGAATGGTTGGGGAATACT+TGG - chr8_2:44515174-44515193 None:intergenic 45.0%
CAAGTATTCCCCAACCATTC+AGG + chr8_2:44515172-44515191 Msa1249580:CDS 45.0%
GGAAAGAACCTGAATGGTTG+GGG - chr8_2:44515183-44515202 None:intergenic 45.0%
GGGAAAGAACCTGAATGGTT+GGG - chr8_2:44515184-44515203 None:intergenic 45.0%
AGGGAAAGAACCTGAATGGT+TGG - chr8_2:44515185-44515204 None:intergenic 45.0%
AAGGAGGGAAAGAACCTGAA+TGG - chr8_2:44515189-44515208 None:intergenic 45.0%
AGACAGTTCATCATCAGGAC+CGG + chr8_2:44515255-44515274 Msa1249580:intron 45.0%
!! GTTTGGGTTTGTTGACCCTT+AGG - chr8_2:44515281-44515300 None:intergenic 45.0%
AGGGTCAACAAACCCAAACA+AGG + chr8_2:44515282-44515301 Msa1249580:intron 45.0%
GGGTCAACAAACCCAAACAA+GGG + chr8_2:44515283-44515302 Msa1249580:intron 45.0%
! GAGGTCTAAAGCCCTTGTTT+GGG - chr8_2:44515297-44515316 None:intergenic 45.0%
! TGAGGTCTAAAGCCCTTGTT+TGG - chr8_2:44515298-44515317 None:intergenic 45.0%
GGCCTCTTAATCTGTTATGC+CGG + chr8_2:44515513-44515532 Msa1249580:intron 45.0%
GACCGGCATAACAGATTAAG+AGG - chr8_2:44515518-44515537 None:intergenic 45.0%
!!! ACTTTTTCTGGTTGGGGACA+AGG - chr8_2:44515728-44515747 None:intergenic 45.0%
CCCCAACCAGAAAAAGTCAT+TGG + chr8_2:44515731-44515750 Msa1249580:CDS 45.0%
GGACTCAATCCTCATTCTGA+TGG + chr8_2:44515752-44515771 Msa1249580:CDS 45.0%
CAACATTGGAGACATGCTAG+AGG + chr8_2:44515880-44515899 Msa1249580:CDS 45.0%
AGCACTGTGAAATGTGGCAA+CGG - chr8_2:44516284-44516303 None:intergenic 45.0%
!!! TTATATTTTTAAAAGAAATA+AGG - chr8_2:44514649-44514668 None:intergenic 5.0%
!!! TCTTAAAATAATATTTTTAA+AGG + chr8_2:44515468-44515487 Msa1249580:intron 5.0%
!!! TTATATTTTTAAAAGAAATA+AGG - chr8_2:44514649-44514668 None:intergenic 5.0%
!!! TCTTAAAATAATATTTTTAA+AGG + chr8_2:44515468-44515487 Msa1249580:intron 5.0%
GAAGCTTGGAACCTCTCTCT+TGG + chr8_2:44514379-44514398 Msa1249580:CDS 50.0%
! TGGGTTGCTTTACTAGCTCC+TGG - chr8_2:44514415-44514434 None:intergenic 50.0%
AGGAGACGGTGATTCAAACC+TGG - chr8_2:44514607-44514626 None:intergenic 50.0%
CGGAGTCGATCCTTTATTGG+TGG + chr8_2:44514957-44514976 Msa1249580:CDS 50.0%
CCGGCAGATTGAAGAAGTCT+TGG - chr8_2:44515002-44515021 None:intergenic 50.0%
AGACTTCTTCAATCTGCCGG+TGG + chr8_2:44515002-44515021 Msa1249580:CDS 50.0%
CCGAAACCTTCCATATCTCC+TGG - chr8_2:44515054-44515073 None:intergenic 50.0%
AAGAGGGAGGTCAAGCAATG+AGG + chr8_2:44515687-44515706 Msa1249580:CDS 50.0%
!!! TTTTCTGGTTGGGGACAAGG+AGG - chr8_2:44515725-44515744 None:intergenic 50.0%
AGGGCAGTACCATCAGAATG+AGG - chr8_2:44515764-44515783 None:intergenic 50.0%
!! GGAGTAATAAGGCTTGGTGC+TGG - chr8_2:44516328-44516347 None:intergenic 50.0%
GAAGCTTGGAACCTCTCTCT+TGG + chr8_2:44514379-44514398 Msa1249580:CDS 50.0%
! TGGGTTGCTTTACTAGCTCC+TGG - chr8_2:44514415-44514434 None:intergenic 50.0%
AGGAGACGGTGATTCAAACC+TGG - chr8_2:44514607-44514626 None:intergenic 50.0%
CGGAGTCGATCCTTTATTGG+TGG + chr8_2:44514957-44514976 Msa1249580:CDS 50.0%
CCGGCAGATTGAAGAAGTCT+TGG - chr8_2:44515002-44515021 None:intergenic 50.0%
AGACTTCTTCAATCTGCCGG+TGG + chr8_2:44515002-44515021 Msa1249580:CDS 50.0%
CCGAAACCTTCCATATCTCC+TGG - chr8_2:44515054-44515073 None:intergenic 50.0%
AAGAGGGAGGTCAAGCAATG+AGG + chr8_2:44515687-44515706 Msa1249580:CDS 50.0%
!!! TTTTCTGGTTGGGGACAAGG+AGG - chr8_2:44515725-44515744 None:intergenic 50.0%
AGGGCAGTACCATCAGAATG+AGG - chr8_2:44515764-44515783 None:intergenic 50.0%
!! GGAGTAATAAGGCTTGGTGC+TGG - chr8_2:44516328-44516347 None:intergenic 50.0%
!! GACAGAAGGCACCAAGAGAG+AGG - chr8_2:44514393-44514412 None:intergenic 55.0%
!! TCTCTTGGTGCCTTCTGTCC+AGG + chr8_2:44514394-44514413 Msa1249580:CDS 55.0%
TCATCATCAGGACCGGCCTA+AGG + chr8_2:44515262-44515281 Msa1249580:intron 55.0%
CATCATCAGGACCGGCCTAA+GGG + chr8_2:44515263-44515282 Msa1249580:intron 55.0%
!! GGGTTTGTTGACCCTTAGGC+CGG - chr8_2:44515277-44515296 None:intergenic 55.0%
!! GACAGAAGGCACCAAGAGAG+AGG - chr8_2:44514393-44514412 None:intergenic 55.0%
!! TCTCTTGGTGCCTTCTGTCC+AGG + chr8_2:44514394-44514413 Msa1249580:CDS 55.0%
TCATCATCAGGACCGGCCTA+AGG + chr8_2:44515262-44515281 Msa1249580:intron 55.0%
CATCATCAGGACCGGCCTAA+GGG + chr8_2:44515263-44515282 Msa1249580:intron 55.0%
!! GGGTTTGTTGACCCTTAGGC+CGG - chr8_2:44515277-44515296 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 44514305 44516462 44514305 ID=Msa1249580;Name=Msa1249580
chr8_2 mRNA 44514305 44516462 44514305 ID=Msa1249580-mRNA-1;Parent=Msa1249580;Name=Msa1249580-mRNA-1;_AED=0.03;_eAED=0.04;_QI=0|0.33|0|1|1|1|4|0|375
chr8_2 exon 44514305 44514607 44514305 ID=Msa1249580-mRNA-1:exon:13473;Parent=Msa1249580-mRNA-1
chr8_2 exon 44514946 44515193 44514946 ID=Msa1249580-mRNA-1:exon:13474;Parent=Msa1249580-mRNA-1
chr8_2 exon 44515577 44515901 44515577 ID=Msa1249580-mRNA-1:exon:13475;Parent=Msa1249580-mRNA-1
chr8_2 exon 44516211 44516462 44516211 ID=Msa1249580-mRNA-1:exon:13476;Parent=Msa1249580-mRNA-1
chr8_2 CDS 44514305 44514607 44514305 ID=Msa1249580-mRNA-1:cds;Parent=Msa1249580-mRNA-1
chr8_2 CDS 44514946 44515193 44514946 ID=Msa1249580-mRNA-1:cds;Parent=Msa1249580-mRNA-1
chr8_2 CDS 44515577 44515901 44515577 ID=Msa1249580-mRNA-1:cds;Parent=Msa1249580-mRNA-1
chr8_2 CDS 44516211 44516462 44516211 ID=Msa1249580-mRNA-1:cds;Parent=Msa1249580-mRNA-1
Gene Sequence

>Msa1249580

ATGGAAGTGATCCAAGCAAATGTTATTGATATCGAATTATTTTTCTTTGCAGCAATGGATTCAGAAATGGTAAAGAAGCTTGGAACCTCTCTCTTGGTGCCTTCTGTCCAGGAGCTAGTAAAGCAACCCATCACCAAAGTTCCAGAACGATATGTTCAGCAAAACCAAGACCCTTCTGTAGTATCTAGCACAATCTCTTTACCACAAGTTCCAGTCATCGATTTGCAGAAGTTATTGTCTGAAGAAGATGGAACTGAACTACAAAAATTCGATCATGCATGCAAAGAATGGGGTTTCTTCCAGTTGATCAATCACGGAGTCGATCCTTTATTGGTGGAAAATTTTAAAAAACTTGTCCAAGACTTCTTCAATCTGCCGGTGGAAGAGAAGAAAATATTATCACAGAAACCAGGAGATATGGAAGGTTTCGGTCAGATGTTTGTTGTATCAGACGAACACAAATTGGAATGGGCAGATTTATTCTACATTGTCACTCATCCATCATACATGAGAAATCCAAACTTATTTCCAAGTATTCCCCAACCATTCAGAGAAAATCTAGAGATGTACTCTTTAGAACTGAAAAAGCTATGTGTGACGATCGTTGAATTTATGTCAAAAGCATTAAAGATCCCAAAAAATGAATTGCTAGAGTTATTTGAAGAGGGAGGTCAAGCAATGAGGATGAATTACTATCCTCCTTGTCCCCAACCAGAAAAAGTCATTGGACTCAATCCTCATTCTGATGGTACTGCCCTTACCATTCTTCTCCAACTCAATGAAATAGAAGGCCTTCAAATAAAAAAAGATGGAATGTGGATTCCTATTAAGCCTCTCACAAATGCTTTTGTTATCAACATTGGAGACATGCTAGAGATATTGACGAATGGTATTTATCGAAGTATTGAACATCGAGCAACAATTAACTCAGAGAAGGAGAGGATTTCCGTTGCCACATTTCACAGTGCTAGATTGAATGCAATTCTTGCTCCAGCACCAAGCCTTATTACTCCTAAAACTCCTGCAGTGTTCAACAACATTAGTGTGGAAGATTTCTTCAAAGGATATTTCTCACGAAAGCTTGAAGGAAAATTGTACATTGATGACATGAGGATGAAAAATGAGTGA
Protein sequence

>Msa1249580

MEVIQANVIDIELFFFAAMDSEMVKKLGTSLLVPSVQELVKQPITKVPERYVQQNQDPSVVSSTISLPQVPVIDLQKLLSEEDGTELQKFDHACKEWGFFQLINHGVDPLLVENFKKLVQDFFNLPVEEKKILSQKPGDMEGFGQMFVVSDEHKLEWADLFYIVTHPSYMRNPNLFPSIPQPFRENLEMYSLELKKLCVTIVEFMSKALKIPKNELLELFEEGGQAMRMNYYPPCPQPEKVIGLNPHSDGTALTILLQLNEIEGLQIKKDGMWIPIKPLTNAFVINIGDMLEILTNGIYRSIEHRATINSEKERISVATFHSARLNAILAPAPSLITPKTPAVFNNISVEDFFKGYFSRKLEGKLYIDDMRMKNE*