AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249750 MtrunA17_Chr5g0413571 72.593 135 37 0 27 161 1 135 2.16e-69 206
Msa1249750 MtrunA17_Chr2g0282661 68.841 138 37 2 31 162 14 151 2.59e-65 196
Msa1249750 MtrunA17_Chr8g0365411 75.000 136 1 1 27 162 1 103 3.91e-64 191
Msa1249750 MtrunA17_Chr2g0324821 69.697 132 36 1 35 162 8 139 3.99e-62 187
Msa1249750 MtrunA17_Chr6g0476691 86.000 100 13 1 63 162 1 99 3.25e-56 171
Msa1249750 MtrunA17_Chr5g0438061 51.200 125 52 2 37 160 103 219 5.22e-32 114
Msa1249750 MtrunA17_Chr5g0438041 49.612 129 52 4 37 160 5 125 5.68e-28 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249750 AT1G23750.1 78.102 137 29 1 27 162 1 137 5.68e-79 231
Msa1249750 AT1G10590.2 77.372 137 28 2 27 160 1 137 2.07e-74 219
Msa1249750 AT1G10590.1 77.372 137 28 2 27 160 1 137 2.07e-74 219
Msa1249750 AT1G10590.3 77.372 137 28 2 27 160 15 151 2.42e-74 219
Msa1249750 AT2G33845.1 72.868 129 34 1 35 162 53 181 4.83e-63 192
Msa1249750 AT1G23750.2 81.000 100 19 0 63 162 1 100 1.16e-58 178
Msa1249750 AT4G28440.1 65.909 132 39 3 35 160 18 149 4.64e-58 178
Msa1249750 AT1G03810.1 61.417 127 46 2 35 158 15 141 5.10e-51 160

Find 68 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTAGTTGGTTATAATT+AGG 0.171736 8_2:-44715534 None:intergenic
TTCACTTCCAGTTTCATTTC+AGG 0.179415 8_2:+44710405 Msa1249750:CDS
TCTAACATTATTATTAATTA+TGG 0.199924 8_2:-44715612 None:intergenic
CAACTTCTACTGTGTTATAA+TGG 0.207399 8_2:+44715225 Msa1249750:three_prime_UTR
TAACAAGTTCATATTCAATA+AGG 0.264256 8_2:-44715171 None:intergenic
ATCAACTAGGAAAAGAGATT+TGG 0.329944 8_2:+44715263 Msa1249750:three_prime_UTR
CAACTGGAAGAAATAATTCT+TGG 0.335285 8_2:-44715297 None:intergenic
AACTTCTACTGTGTTATAAT+GGG 0.350186 8_2:+44715226 Msa1249750:three_prime_UTR
TAAATGAAAGATAAGGGAAT+TGG 0.356242 8_2:+44715367 Msa1249750:three_prime_UTR
AAGGATTACATGAAGTATAA+AGG 0.379648 8_2:-44715494 None:intergenic
AATCTGACCTGAAATGAAAC+TGG 0.387919 8_2:-44710412 None:intergenic
TTGCTTTAAATGAAAGATAA+GGG 0.392170 8_2:+44715361 Msa1249750:three_prime_UTR
CAAGAAAATTACGCTTTAGT+TGG 0.400540 8_2:-44715545 None:intergenic
AACAAGTTCATATTCAATAA+GGG 0.410549 8_2:-44715170 None:intergenic
GGTAGGAAACTAGGAATCAT+TGG 0.432403 8_2:-44715639 None:intergenic
GATGCGAATTGCTGAAAGTT+TGG 0.443876 8_2:+44710880 Msa1249750:CDS
ATTAGAACCACTGATTCAAC+TGG 0.449927 8_2:-44715313 None:intergenic
ATTATGGCGGAGGCAAAACC+TGG 0.453548 8_2:+44710725 Msa1249750:CDS
TGAGGCTTGCTGTGGACAAA+TGG 0.453565 8_2:+44715089 Msa1249750:CDS
AGTTTGGTGGGTGATGAGAC+TGG 0.455465 8_2:+44710896 Msa1249750:CDS
ATTGCTTTAAATGAAAGATA+AGG 0.462486 8_2:+44715360 Msa1249750:three_prime_UTR
GACCTTTAGATCTCATGCAC+TGG 0.475661 8_2:+44715447 Msa1249750:three_prime_UTR
ATGCAGAAGGGCCGTCCCGA+TGG 0.482430 8_2:+44710842 Msa1249750:CDS
GAGGCTTGCTGTGGACAAAT+GGG 0.484723 8_2:+44715090 Msa1249750:CDS
AATGTTGTGGAGTAACTTGT+TGG 0.490657 8_2:+44715193 Msa1249750:exon
TTCCAGTGCATGAGATCTAA+AGG 0.509380 8_2:-44715449 None:intergenic
GTTCATATTCAATAAGGGAC+AGG 0.511339 8_2:-44715165 None:intergenic
AAGGTCGGCTTTCTCAATCC+AGG 0.513274 8_2:-44710743 None:intergenic
TCCTTGACAGTGAAATCAGC+AGG 0.523551 8_2:-44715133 None:intergenic
TGACGAGGCTGAGGACCATC+GGG 0.535037 8_2:-44710857 None:intergenic
CTGACGAGGCTGAGGACCAT+CGG 0.535047 8_2:-44710858 None:intergenic
TTAGGTTAAGATTATGGCGG+AGG 0.537059 8_2:+44710715 Msa1249750:intron
CAGCTTCGACCGGGGACTAG+TGG 0.540370 8_2:+44710779 Msa1249750:CDS
TCCTGCTGATTTCACTGTCA+AGG 0.542969 8_2:+44715132 Msa1249750:CDS
TAAGGTCGATCAGCTTCGAC+CGG 0.552472 8_2:+44710769 Msa1249750:CDS
ATATGAACTTGTTAATGTTG+TGG 0.553436 8_2:+44715180 Msa1249750:CDS
ATTCGCATCTGACGAGGCTG+AGG 0.553923 8_2:-44710866 None:intergenic
TACTAAGATGGTGATGCAGA+AGG 0.560722 8_2:+44710829 Msa1249750:CDS
ATTTCTTCCAGTTGAATCAG+TGG 0.565114 8_2:+44715306 Msa1249750:three_prime_UTR
GAGAAAGCCGACCTTCACTA+AGG 0.566200 8_2:+44710751 Msa1249750:CDS
TAGTAGAGCCATCTTTCAGC+AGG 0.566386 8_2:-44715024 None:intergenic
GCACTGGAATATATTATATG+TGG 0.566669 8_2:+44715463 Msa1249750:three_prime_UTR
TTTACTGCAAGAAATGATCA+AGG 0.569259 8_2:+44710929 Msa1249750:CDS
TTTCTTGTGCTTTCTCAGTG+TGG 0.569415 8_2:+44715561 Msa1249750:three_prime_UTR
AAGGTCGATCAGCTTCGACC+GGG 0.569551 8_2:+44710770 Msa1249750:CDS
AGAGTGTGGCCACTAGTCCC+CGG 0.585454 8_2:-44710788 None:intergenic
GAAAAGAGATTTGGAAGCAG+TGG 0.593894 8_2:+44715272 Msa1249750:three_prime_UTR
GTTTGGTGGGTGATGAGACT+GGG 0.596348 8_2:+44710897 Msa1249750:CDS
CGAATTGCTGAAAGTTTGGT+GGG 0.602856 8_2:+44710884 Msa1249750:CDS
ACTAAGATGGTGATGCAGAA+GGG 0.607883 8_2:+44710830 Msa1249750:CDS
AGGATCAATGAGGCTTGCTG+TGG 0.611605 8_2:+44715081 Msa1249750:CDS
TCAGCAATTCGCATCTGACG+AGG 0.613833 8_2:-44710872 None:intergenic
GCGAATTGCTGAAAGTTTGG+TGG 0.616185 8_2:+44710883 Msa1249750:CDS
CAAGGTGGTGAATACTAAGA+TGG 0.621326 8_2:+44710817 Msa1249750:CDS
TGATCGACCTTAGTGAAGGT+CGG 0.622839 8_2:-44710758 None:intergenic
TGGCCACACTCTGACTGTCA+AGG 0.624809 8_2:+44710799 Msa1249750:CDS
AACTGGAAGTGAAACTGCAA+AGG 0.625153 8_2:-44710395 None:intergenic
ACATGTTTAAAGGATCAATG+AGG 0.632902 8_2:+44715071 Msa1249750:CDS
ATAAAGCAAATCCATCAACT+AGG 0.636756 8_2:+44715250 Msa1249750:three_prime_UTR
GTGGTGTAAAAGTGTCTAAG+TGG 0.639270 8_2:+44715580 Msa1249750:three_prime_UTR
AGGTCGATCAGCTTCGACCG+GGG 0.639462 8_2:+44710771 Msa1249750:CDS
AAGCTGATCGACCTTAGTGA+AGG 0.641727 8_2:-44710762 None:intergenic
CCACCTTGACAGTCAGAGTG+TGG 0.645365 8_2:-44710802 None:intergenic
GAGGCTGAGGACCATCGGGA+CGG 0.646339 8_2:-44710853 None:intergenic
CAGGATCTGTTACTTCGACA+CGG 0.653882 8_2:-44715114 None:intergenic
AGGAAACTAGGAATCATTGG+AGG 0.664520 8_2:-44715636 None:intergenic
CCACACTCTGACTGTCAAGG+TGG 0.685740 8_2:+44710802 Msa1249750:CDS
AGGCTTGCTGTGGACAAATG+GGG 0.694034 8_2:+44715091 Msa1249750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATCTAAATATATTTA+AGG - chr8_2:44711760-44711779 None:intergenic 10.0%
!! AAACAAATAAATGAAAAAAA+AGG + chr8_2:44713650-44713669 Msa1249750:intron 10.0%
!! TCTAACATTATTATTAATTA+TGG - chr8_2:44715615-44715634 None:intergenic 10.0%
!! TTGATTAATGAACAAAATTA+GGG - chr8_2:44710587-44710606 None:intergenic 15.0%
!! ATTGATTAATGAACAAAATT+AGG - chr8_2:44710588-44710607 None:intergenic 15.0%
!! TCCAACATTATATTAATTTA+AGG + chr8_2:44710611-44710630 Msa1249750:intron 15.0%
!! ACCTTAAATTAATATAATGT+TGG - chr8_2:44710615-44710634 None:intergenic 15.0%
!!! TCATAGTATGTTTTTAATTA+TGG - chr8_2:44711307-44711326 None:intergenic 15.0%
!! ATCTAAATATATTTAAGGAT+AGG - chr8_2:44711755-44711774 None:intergenic 15.0%
!! AATAAATGAACACATAAAAT+AGG - chr8_2:44711896-44711915 None:intergenic 15.0%
!! AAATTAAGTTTCTGTTTAAA+TGG - chr8_2:44712710-44712729 None:intergenic 15.0%
!!! ACCAAAAAACTTATAATTTT+GGG - chr8_2:44714116-44714135 None:intergenic 15.0%
!!! AACCAAAAAACTTATAATTT+TGG - chr8_2:44714117-44714136 None:intergenic 15.0%
!! TAGTTATTTAAAAAGTGAAT+TGG + chr8_2:44714147-44714166 Msa1249750:intron 15.0%
!!! TGTTTTGTTATCTTTAATTA+TGG + chr8_2:44715408-44715427 Msa1249750:three_prime_UTR 15.0%
!! TCGAAAAAATTTGCATAAAA+AGG - chr8_2:44710528-44710547 None:intergenic 20.0%
!!! TTTGGTTTTTGTAAGATTTT+AGG + chr8_2:44710697-44710716 Msa1249750:intron 20.0%
!!! AAGATTTTAGGTTAAGATTA+TGG + chr8_2:44710709-44710728 Msa1249750:intron 20.0%
!!! GTTATGAACTTAAATTTTAC+AGG - chr8_2:44711342-44711361 None:intergenic 20.0%
!!! ACTACAATTAGTATTTTACT+CGG + chr8_2:44711811-44711830 Msa1249750:intron 20.0%
!!! GTGTCGTATTATTATTTTTT+TGG + chr8_2:44711852-44711871 Msa1249750:intron 20.0%
!!! AACACATCTCTAATATATTT+TGG - chr8_2:44711982-44712001 None:intergenic 20.0%
!!! TTTTTAAGAATTGGTGATTA+AGG - chr8_2:44712349-44712368 None:intergenic 20.0%
!! TGATGACAGAAATAAATAAT+TGG + chr8_2:44712445-44712464 Msa1249750:intron 20.0%
!!! ATTTTTACTTTTAACAGCTT+TGG - chr8_2:44712553-44712572 None:intergenic 20.0%
!!! AAACAGAAACTTAATTTGAT+TGG + chr8_2:44712713-44712732 Msa1249750:intron 20.0%
!!! AGATGTGGAATTATTTTATT+AGG - chr8_2:44713043-44713062 None:intergenic 20.0%
!! TTTGTTAATTTACTTAGATG+TGG - chr8_2:44713058-44713077 None:intergenic 20.0%
!! ATCAAGAAAAATAGTTAATC+AGG - chr8_2:44713249-44713268 None:intergenic 20.0%
!! TCTTCATTATTCAAAGATTA+TGG - chr8_2:44713449-44713468 None:intergenic 20.0%
!!! ACCCAAAATTATAAGTTTTT+TGG + chr8_2:44714112-44714131 Msa1249750:intron 20.0%
!!! TGTGAATTTTCAAATTTTCT+TGG + chr8_2:44714358-44714377 Msa1249750:intron 20.0%
!!! GTGAATTTTCAAATTTTCTT+GGG + chr8_2:44714359-44714378 Msa1249750:intron 20.0%
!!! TGAATTTTCAAATTTTCTTG+GGG + chr8_2:44714360-44714379 Msa1249750:intron 20.0%
!!! AATGTTATTTGTAATTTGCA+AGG + chr8_2:44714403-44714422 Msa1249750:intron 20.0%
!!! TTGCATTTGAAATACAAATA+TGG + chr8_2:44714749-44714768 Msa1249750:intron 20.0%
!! AACAAGTTCATATTCAATAA+GGG - chr8_2:44715173-44715192 None:intergenic 20.0%
!! TAACAAGTTCATATTCAATA+AGG - chr8_2:44715174-44715193 None:intergenic 20.0%
!!! ATTGCTTTAAATGAAAGATA+AGG + chr8_2:44715360-44715379 Msa1249750:three_prime_UTR 20.0%
!!! TTGCTTTAAATGAAAGATAA+GGG + chr8_2:44715361-44715380 Msa1249750:three_prime_UTR 20.0%
! ATAATACAAGTGAATAAGCA+AGG - chr8_2:44710475-44710494 None:intergenic 25.0%
!! CAATAAAATGTGACCAATTT+TGG + chr8_2:44710559-44710578 Msa1249750:intron 25.0%
!! GTTAGATTTTTCTTTTCTAG+TGG + chr8_2:44710659-44710678 Msa1249750:intron 25.0%
!!! ATTTTAGGTTAAGATTATGG+CGG + chr8_2:44710712-44710731 Msa1249750:intron 25.0%
! TTAAAACAACATCACGAATT+TGG - chr8_2:44711016-44711035 None:intergenic 25.0%
!!! TGCTCTGTTTTTATTTATCT+AGG + chr8_2:44711195-44711214 Msa1249750:intron 25.0%
! AGACATTTAAACAAGTTTGA+CGG - chr8_2:44711229-44711248 None:intergenic 25.0%
! TTAGCATTCTTTACAATATG+TGG - chr8_2:44711366-44711385 None:intergenic 25.0%
! CTAAGTAAAATCTAGATTTC+CGG + chr8_2:44711382-44711401 Msa1249750:intron 25.0%
! TAAGTAAAATCTAGATTTCC+GGG + chr8_2:44711383-44711402 Msa1249750:intron 25.0%
!!! CTTTGTATCAATTAAGTTGA+TGG + chr8_2:44711450-44711469 Msa1249750:intron 25.0%
!!! AAAACAAAACATTGACTCAA+GGG - chr8_2:44711535-44711554 None:intergenic 25.0%
!! ATTAGCTTAAATACTAGTAG+AGG - chr8_2:44711591-44711610 None:intergenic 25.0%
! TTAATATCATGAGAACTCAA+AGG - chr8_2:44711952-44711971 None:intergenic 25.0%
!!! CTTATTAAGCACTAGTTTTT+AGG + chr8_2:44712318-44712337 Msa1249750:intron 25.0%
!!! GGATAGTTCTTTTTAAGAAT+TGG - chr8_2:44712358-44712377 None:intergenic 25.0%
! TCTTAAAAAGAACTATCCAT+TGG + chr8_2:44712360-44712379 Msa1249750:intron 25.0%
! AAACAATATAAGCACTTGTT+GGG + chr8_2:44712419-44712438 Msa1249750:intron 25.0%
! AATATCCTATCTGTAACTAT+TGG - chr8_2:44712845-44712864 None:intergenic 25.0%
! TTTATTACAACACAAGTAAC+AGG + chr8_2:44712981-44713000 Msa1249750:intron 25.0%
!!! TTATTTTATTAGGAACTGGT+TGG - chr8_2:44713033-44713052 None:intergenic 25.0%
!!! GGAATTATTTTATTAGGAAC+TGG - chr8_2:44713037-44713056 None:intergenic 25.0%
! TAAAGCCCATTAATACAATT+GGG - chr8_2:44713121-44713140 None:intergenic 25.0%
! ATAAAGCCCATTAATACAAT+TGG - chr8_2:44713122-44713141 None:intergenic 25.0%
! TTAATACCTAGTACATAGTA+GGG - chr8_2:44713392-44713411 None:intergenic 25.0%
! ATTAATACCTAGTACATAGT+AGG - chr8_2:44713393-44713412 None:intergenic 25.0%
! CATTTACAACATATATCAAG+TGG - chr8_2:44713626-44713645 None:intergenic 25.0%
! CACTTGATATATGTTGTAAA+TGG + chr8_2:44713624-44713643 Msa1249750:intron 25.0%
! TTCTTAAACCAAGATAACTA+TGG + chr8_2:44714249-44714268 Msa1249750:intron 25.0%
! TCTTAAACCAAGATAACTAT+GGG + chr8_2:44714250-44714269 Msa1249750:intron 25.0%
! AAGAATAGTACTAGAATACA+AGG + chr8_2:44714320-44714339 Msa1249750:intron 25.0%
! AATGATTCCATAAAAAAGAC+AGG - chr8_2:44714559-44714578 None:intergenic 25.0%
!! TTTTTATGGAATCATTGTGT+TGG + chr8_2:44714563-44714582 Msa1249750:intron 25.0%
! TTATTCTTCAATAACCTATG+AGG - chr8_2:44714652-44714671 None:intergenic 25.0%
!!! GACAAAGTTCAATTTTTTTG+TGG + chr8_2:44714692-44714711 Msa1249750:intron 25.0%
!! TTCAGCAATTTAACTTAACA+TGG - chr8_2:44714952-44714971 None:intergenic 25.0%
! GCAAAAATTGACATGTTTAA+AGG + chr8_2:44715061-44715080 Msa1249750:CDS 25.0%
!!! ATATGAACTTGTTAATGTTG+TGG + chr8_2:44715180-44715199 Msa1249750:CDS 25.0%
! AACTTCTACTGTGTTATAAT+GGG + chr8_2:44715226-44715245 Msa1249750:three_prime_UTR 25.0%
! TAAATGAAAGATAAGGGAAT+TGG + chr8_2:44715367-44715386 Msa1249750:three_prime_UTR 25.0%
! ACAAAACAAAAAGCAAGATT+TGG - chr8_2:44715396-44715415 None:intergenic 25.0%
! AAGGATTACATGAAGTATAA+AGG - chr8_2:44715497-44715516 None:intergenic 25.0%
!! GGAGTATTAAAAGCAAAAAA+AGG - chr8_2:44715516-44715535 None:intergenic 25.0%
GCAAGGTTAATTAACATGAA+TGG - chr8_2:44710458-44710477 None:intergenic 30.0%
CAAAATTAGGGTTCCAAAAT+TGG - chr8_2:44710575-44710594 None:intergenic 30.0%
TTTACTGCAAGAAATGATCA+AGG + chr8_2:44710929-44710948 Msa1249750:CDS 30.0%
AACAATTGTATAGACCAAAC+AGG - chr8_2:44710993-44711012 None:intergenic 30.0%
AAATACGCAGTTACTACTAT+TGG - chr8_2:44711090-44711109 None:intergenic 30.0%
GTTATTACGTTCGTTAATTC+TGG + chr8_2:44711273-44711292 Msa1249750:intron 30.0%
TTTGTTGAAAGCAGAATCAT+AGG - chr8_2:44711505-44711524 None:intergenic 30.0%
TATGATTCTGCTTTCAACAA+AGG + chr8_2:44711504-44711523 Msa1249750:intron 30.0%
ATGATTCTGCTTTCAACAAA+GGG + chr8_2:44711505-44711524 Msa1249750:intron 30.0%
!! GAAAACAAAACATTGACTCA+AGG - chr8_2:44711536-44711555 None:intergenic 30.0%
ATTCTAACTACTCACTCTTT+AGG + chr8_2:44711658-44711677 Msa1249750:intron 30.0%
TCCTTACATGATGAAAATGA+AGG + chr8_2:44711788-44711807 Msa1249750:intron 30.0%
! TCCTTCATTTTCATCATGTA+AGG - chr8_2:44711792-44711811 None:intergenic 30.0%
CAGTTCTTCATTACACAAAT+AGG - chr8_2:44712010-44712029 None:intergenic 30.0%
TGTGTAATGAAGAACTGAAT+TGG + chr8_2:44712013-44712032 Msa1249750:intron 30.0%
TAAAGAATGCAAAATACCAC+TGG - chr8_2:44712077-44712096 None:intergenic 30.0%
AGTATAGATGGAACATCAAA+GGG - chr8_2:44712235-44712254 None:intergenic 30.0%
AAGTATAGATGGAACATCAA+AGG - chr8_2:44712236-44712255 None:intergenic 30.0%
!! TAATGAATAAGCACTGAATC+AGG - chr8_2:44712262-44712281 None:intergenic 30.0%
! TTAAGAATTGGTGATTAAGG+TGG - chr8_2:44712346-44712365 None:intergenic 30.0%
CAAACAATATAAGCACTTGT+TGG + chr8_2:44712418-44712437 Msa1249750:intron 30.0%
AATGTAAAATCACTCACTGT+AGG + chr8_2:44712479-44712498 Msa1249750:intron 30.0%
ATGTAAAATCACTCACTGTA+GGG + chr8_2:44712480-44712499 Msa1249750:intron 30.0%
CTACAAAACGTTTACCAAAT+AGG - chr8_2:44712506-44712525 None:intergenic 30.0%
! CTATTTGGTAAACGTTTTGT+AGG + chr8_2:44712504-44712523 Msa1249750:intron 30.0%
GTAAAAATGTGTGATGTGTA+AGG + chr8_2:44712565-44712584 Msa1249750:intron 30.0%
!! TTACTTTTGGGGGATTTTAA+GGG - chr8_2:44712599-44712618 None:intergenic 30.0%
!! TTTACTTTTGGGGGATTTTA+AGG - chr8_2:44712600-44712619 None:intergenic 30.0%
! TGGTTTGCAATAGGATATTA+TGG - chr8_2:44712690-44712709 None:intergenic 30.0%
! CTGTTTAAATGGTTTGCAAT+AGG - chr8_2:44712699-44712718 None:intergenic 30.0%
AGTAAGGAGGATAAATCAAA+TGG + chr8_2:44712811-44712830 Msa1249750:intron 30.0%
GTAAGGAGGATAAATCAAAT+GGG + chr8_2:44712812-44712831 Msa1249750:intron 30.0%
AAAGTCCAATAGTTACAGAT+AGG + chr8_2:44712837-44712856 Msa1249750:intron 30.0%
ACAGATAGGATATTATCTTG+AGG + chr8_2:44712851-44712870 Msa1249750:intron 30.0%
AAACAATGTCTAAGAGAGTT+AGG + chr8_2:44712885-44712904 Msa1249750:intron 30.0%
! GCATTGATACATATAAACGA+GGG - chr8_2:44713337-44713356 None:intergenic 30.0%
! TGCATTGATACATATAAACG+AGG - chr8_2:44713338-44713357 None:intergenic 30.0%
GTACTAGGTATTAATAGTTG+AGG + chr8_2:44713398-44713417 Msa1249750:intron 30.0%
GAACATGCTCTAGTAATTAT+AGG + chr8_2:44713583-44713602 Msa1249750:intron 30.0%
TACTAGCAGAATACAAAATG+TGG + chr8_2:44713679-44713698 Msa1249750:intron 30.0%
! GAATACAAAATGTGGTGTTA+TGG + chr8_2:44713687-44713706 Msa1249750:intron 30.0%
AAAAAGTGAATTGGACTACT+TGG + chr8_2:44714156-44714175 Msa1249750:intron 30.0%
GTTGTACTGCATAACTTAAT+AGG + chr8_2:44714219-44714238 Msa1249750:intron 30.0%
! GATTTTTCCCATAGTTATCT+TGG - chr8_2:44714260-44714279 None:intergenic 30.0%
!! TGCGAATTGTTGATTCATTA+GGG + chr8_2:44714602-44714621 Msa1249750:intron 30.0%
ATGAAATTCAGTATCCTCAT+AGG + chr8_2:44714635-44714654 Msa1249750:intron 30.0%
AATTCAGCAGCAAAGAATAT+GGG - chr8_2:44714870-44714889 None:intergenic 30.0%
AAATTCAGCAGCAAAGAATA+TGG - chr8_2:44714871-44714890 None:intergenic 30.0%
! GCAATTTAACTTAACATGGA+TGG - chr8_2:44714948-44714967 None:intergenic 30.0%
ACATGTTTAAAGGATCAATG+AGG + chr8_2:44715071-44715090 Msa1249750:CDS 30.0%
CAACTTCTACTGTGTTATAA+TGG + chr8_2:44715225-44715244 Msa1249750:three_prime_UTR 30.0%
ATAAAGCAAATCCATCAACT+AGG + chr8_2:44715250-44715269 Msa1249750:three_prime_UTR 30.0%
! AAATCTCTTTTCCTAGTTGA+TGG - chr8_2:44715264-44715283 None:intergenic 30.0%
ATCAACTAGGAAAAGAGATT+TGG + chr8_2:44715263-44715282 Msa1249750:three_prime_UTR 30.0%
CAACTGGAAGAAATAATTCT+TGG - chr8_2:44715300-44715319 None:intergenic 30.0%
GCACTGGAATATATTATATG+TGG + chr8_2:44715463-44715482 Msa1249750:three_prime_UTR 30.0%
CGCTTTAGTTGGTTATAATT+AGG - chr8_2:44715537-44715556 None:intergenic 30.0%
CAAGAAAATTACGCTTTAGT+TGG - chr8_2:44715548-44715567 None:intergenic 30.0%
TTCACTTCCAGTTTCATTTC+AGG + chr8_2:44710405-44710424 Msa1249750:CDS 35.0%
AATCTGACCTGAAATGAAAC+TGG - chr8_2:44710415-44710434 None:intergenic 35.0%
TGGAACGTTGTTGTGATATT+TGG + chr8_2:44710679-44710698 Msa1249750:intron 35.0%
! ATTTTGTAGTGATGCCTGTT+TGG + chr8_2:44710976-44710995 Msa1249750:intron 35.0%
CAGTTACTACTATTGGATGA+CGG - chr8_2:44711083-44711102 None:intergenic 35.0%
!! AGTTGATGGCAAACAAAGAA+AGG + chr8_2:44711464-44711483 Msa1249750:intron 35.0%
TTGAAAGCAGAATCATAGGA+AGG - chr8_2:44711501-44711520 None:intergenic 35.0%
AATTAGACAGTTTGAATGCC+TGG - chr8_2:44711638-44711657 None:intergenic 35.0%
ATGCAAAATACCACTGGAAA+GGG - chr8_2:44712071-44712090 None:intergenic 35.0%
AATGCAAAATACCACTGGAA+AGG - chr8_2:44712072-44712091 None:intergenic 35.0%
TAATGCAAGATTACCTCAAG+TGG + chr8_2:44712102-44712121 Msa1249750:intron 35.0%
TGATTCACTCATGCAAATTC+TGG + chr8_2:44712173-44712192 Msa1249750:intron 35.0%
GAATCAGGAACAAGTATAGA+TGG - chr8_2:44712247-44712266 None:intergenic 35.0%
ATTAAGAACATCCGCAATAG+TGG + chr8_2:44712278-44712297 Msa1249750:intron 35.0%
AACCAATGCTTAACAGGAAT+TGG - chr8_2:44712388-44712407 None:intergenic 35.0%
! TGGTAAACGTTTTGTAGGAT+TGG + chr8_2:44712509-44712528 Msa1249750:intron 35.0%
! GGTAAACGTTTTGTAGGATT+GGG + chr8_2:44712510-44712529 Msa1249750:intron 35.0%
ATCCCCCAAAAGTAAATATG+TGG + chr8_2:44712604-44712623 Msa1249750:intron 35.0%
TCCCCCAAAAGTAAATATGT+GGG + chr8_2:44712605-44712624 Msa1249750:intron 35.0%
!! TCCCCACATATTTACTTTTG+GGG - chr8_2:44712610-44712629 None:intergenic 35.0%
!! CTCCCCACATATTTACTTTT+GGG - chr8_2:44712611-44712630 None:intergenic 35.0%
GATATTATGGCATCACTCAT+GGG - chr8_2:44712677-44712696 None:intergenic 35.0%
CAATACAACAAGCACAAGTA+AGG + chr8_2:44712795-44712814 Msa1249750:intron 35.0%
!! TATTAGGAACTGGTTGGTAA+GGG - chr8_2:44713027-44713046 None:intergenic 35.0%
! TTATTAGGAACTGGTTGGTA+AGG - chr8_2:44713028-44713047 None:intergenic 35.0%
TTAATACAATTGGGCCTGTT+GGG - chr8_2:44713112-44713131 None:intergenic 35.0%
ATTAATACAATTGGGCCTGT+TGG - chr8_2:44713113-44713132 None:intergenic 35.0%
AACAGGCCCAATTGTATTAA+TGG + chr8_2:44713112-44713131 Msa1249750:intron 35.0%
ACAGGCCCAATTGTATTAAT+GGG + chr8_2:44713113-44713132 Msa1249750:intron 35.0%
! AATGGGCTTTATCCTAGAAT+AGG + chr8_2:44713130-44713149 Msa1249750:intron 35.0%
ATCAGGCAGAAATTTCCATT+TGG - chr8_2:44713232-44713251 None:intergenic 35.0%
! CATAGTAGGGAAACGTTTTA+TGG - chr8_2:44713379-44713398 None:intergenic 35.0%
TTAGACAGGAGGATAATACA+AGG - chr8_2:44713499-44713518 None:intergenic 35.0%
GTAAAATCTCAGCATTAGAC+AGG - chr8_2:44713513-44713532 None:intergenic 35.0%
AAATAGTGAGTGCTCTAGTA+TGG + chr8_2:44713785-44713804 Msa1249750:intron 35.0%
ACAGACTCCAAAAATCACAA+CGG + chr8_2:44713879-44713898 Msa1249750:intron 35.0%
ATTGGACCTGATCCATATTT+GGG + chr8_2:44714087-44714106 Msa1249750:intron 35.0%
TTCCATAAAAAAGACAGGAG+TGG - chr8_2:44714554-44714573 None:intergenic 35.0%
ATCAACAATTCGCAGCATTA+TGG - chr8_2:44714596-44714615 None:intergenic 35.0%
!! CTGCGAATTGTTGATTCATT+AGG + chr8_2:44714601-44714620 Msa1249750:intron 35.0%
GTTCATATTCAATAAGGGAC+AGG - chr8_2:44715168-44715187 None:intergenic 35.0%
! AATGTTGTGGAGTAACTTGT+TGG + chr8_2:44715193-44715212 Msa1249750:exon 35.0%
ATTTCTTCCAGTTGAATCAG+TGG + chr8_2:44715306-44715325 Msa1249750:three_prime_UTR 35.0%
!! ATTAGAACCACTGATTCAAC+TGG - chr8_2:44715316-44715335 None:intergenic 35.0%
AACTGGAAGTGAAACTGCAA+AGG - chr8_2:44710398-44710417 None:intergenic 40.0%
TTAGGTTAAGATTATGGCGG+AGG + chr8_2:44710715-44710734 Msa1249750:intron 40.0%
CAAGGTGGTGAATACTAAGA+TGG + chr8_2:44710817-44710836 Msa1249750:CDS 40.0%
! TACTAAGATGGTGATGCAGA+AGG + chr8_2:44710829-44710848 Msa1249750:CDS 40.0%
! ACTAAGATGGTGATGCAGAA+GGG + chr8_2:44710830-44710849 Msa1249750:CDS 40.0%
GATGCGAATTGCTGAAAGTT+TGG + chr8_2:44710880-44710899 Msa1249750:CDS 40.0%
CGAATTGCTGAAAGTTTGGT+GGG + chr8_2:44710884-44710903 Msa1249750:CDS 40.0%
GTAAAATCTAGATTTCCGGG+AGG + chr8_2:44711386-44711405 Msa1249750:intron 40.0%
ACTAGTAGAGGTTAGAAGAG+AGG - chr8_2:44711579-44711598 None:intergenic 40.0%
! TTGAATGCCTGGTTGTTGTT+AGG - chr8_2:44711627-44711646 None:intergenic 40.0%
ATGAGAACTCAAAGGTGACA+TGG - chr8_2:44711944-44711963 None:intergenic 40.0%
TATGTAAATGCCCTTTCCAG+TGG + chr8_2:44712058-44712077 Msa1249750:intron 40.0%
!!! GTTTTTTCTACGACCACTTG+AGG - chr8_2:44712118-44712137 None:intergenic 40.0%
CCAACTTAACACCACTATTG+CGG - chr8_2:44712292-44712311 None:intergenic 40.0%
TTAACAGGAATTGGCACCAA+TGG - chr8_2:44712379-44712398 None:intergenic 40.0%
TGCCAATTCCTGTTAAGCAT+TGG + chr8_2:44712383-44712402 Msa1249750:intron 40.0%
GCACAAAACCAATGCTTAAC+AGG - chr8_2:44712394-44712413 None:intergenic 40.0%
!! CCCCACATATTTACTTTTGG+GGG - chr8_2:44712609-44712628 None:intergenic 40.0%
CCCCCAAAAGTAAATATGTG+GGG + chr8_2:44712606-44712625 Msa1249750:intron 40.0%
! GCTCCCCACATATTTACTTT+TGG - chr8_2:44712612-44712631 None:intergenic 40.0%
AAGTAAATATGTGGGGAGCT+TGG + chr8_2:44712613-44712632 Msa1249750:intron 40.0%
CTCCAATACAACTACAACCA+TGG + chr8_2:44712645-44712664 Msa1249750:intron 40.0%
AGCCATGGTTGTAGTTGTAT+TGG - chr8_2:44712650-44712669 None:intergenic 40.0%
GGATATTATGGCATCACTCA+TGG - chr8_2:44712678-44712697 None:intergenic 40.0%
ACCAATCGAGTGAAACTCTT+AGG - chr8_2:44712739-44712758 None:intergenic 40.0%
TACAACAAGCACAAGTAAGG+AGG + chr8_2:44712798-44712817 Msa1249750:intron 40.0%
! TTTTATCACGCAATCTGCGT+TGG + chr8_2:44712917-44712936 Msa1249750:intron 40.0%
AAAACTGCCTACAGCAACTT+CGG - chr8_2:44712943-44712962 None:intergenic 40.0%
ATGCTTCTCATTGCTCCAAA+TGG + chr8_2:44713214-44713233 Msa1249750:intron 40.0%
! AGGGAAACGTTTTATGGCAT+GGG - chr8_2:44713373-44713392 None:intergenic 40.0%
! TAGGGAAACGTTTTATGGCA+TGG - chr8_2:44713374-44713393 None:intergenic 40.0%
ACGTTTCCCTACTATGTACT+AGG + chr8_2:44713383-44713402 Msa1249750:intron 40.0%
AAATCTCAGCATTAGACAGG+AGG - chr8_2:44713510-44713529 None:intergenic 40.0%
CTTATGCAGTTTGACAGAGA+CGG - chr8_2:44713984-44714003 None:intergenic 40.0%
CAAATATGGATCAGGTCCAA+TGG - chr8_2:44714088-44714107 None:intergenic 40.0%
CATTGGACCTGATCCATATT+TGG + chr8_2:44714086-44714105 Msa1249750:intron 40.0%
TTGGACCTGATCCATATTTG+GGG + chr8_2:44714088-44714107 Msa1249750:intron 40.0%
!! AATTTTGGGTGCCCCAAATA+TGG - chr8_2:44714102-44714121 None:intergenic 40.0%
ATAGGGCATGTCAAATGGTT+GGG - chr8_2:44714192-44714211 None:intergenic 40.0%
TGGGAAAAATCCTTCGAAAC+TGG + chr8_2:44714269-44714288 Msa1249750:intron 40.0%
GGGAAAAATCCTTCGAAACT+GGG + chr8_2:44714270-44714289 Msa1249750:intron 40.0%
ATGTTGAGTTTGTAGCCTTC+TGG + chr8_2:44714514-44714533 Msa1249750:intron 40.0%
GCAATTGATCATTGTCCAGA+AGG - chr8_2:44714532-44714551 None:intergenic 40.0%
!!! TGCCACTCCTGTCTTTTTTA+TGG + chr8_2:44714549-44714568 Msa1249750:intron 40.0%
GAAAAGAGATTTGGAAGCAG+TGG + chr8_2:44715272-44715291 Msa1249750:three_prime_UTR 40.0%
TTCCAGTGCATGAGATCTAA+AGG - chr8_2:44715452-44715471 None:intergenic 40.0%
TTTCTTGTGCTTTCTCAGTG+TGG + chr8_2:44715561-44715580 Msa1249750:three_prime_UTR 40.0%
!! GTGGTGTAAAAGTGTCTAAG+TGG + chr8_2:44715580-44715599 Msa1249750:three_prime_UTR 40.0%
AGGAAACTAGGAATCATTGG+AGG - chr8_2:44715639-44715658 None:intergenic 40.0%
TGATCGACCTTAGTGAAGGT+CGG - chr8_2:44710761-44710780 None:intergenic 45.0%
AAGCTGATCGACCTTAGTGA+AGG - chr8_2:44710765-44710784 None:intergenic 45.0%
GCGAATTGCTGAAAGTTTGG+TGG + chr8_2:44710883-44710902 Msa1249750:CDS 45.0%
TGGGGTTTAGTGGAGTGATT+TGG - chr8_2:44711114-44711133 None:intergenic 45.0%
TCCACTAAACCCCACTTTAG+TGG + chr8_2:44711120-44711139 Msa1249750:intron 45.0%
ACCACTAAAGTGGGGTTTAG+TGG - chr8_2:44711124-44711143 None:intergenic 45.0%
! ACCCCACTTTAGTGGTGTTA+TGG + chr8_2:44711128-44711147 Msa1249750:intron 45.0%
CCCATAACACCACTAAAGTG+GGG - chr8_2:44711132-44711151 None:intergenic 45.0%
!! CCCCACTTTAGTGGTGTTAT+GGG + chr8_2:44711129-44711148 Msa1249750:intron 45.0%
CCCCATAACACCACTAAAGT+GGG - chr8_2:44711133-44711152 None:intergenic 45.0%
!! CCCACTTTAGTGGTGTTATG+GGG + chr8_2:44711130-44711149 Msa1249750:intron 45.0%
TCCCCATAACACCACTAAAG+TGG - chr8_2:44711134-44711153 None:intergenic 45.0%
CAGTAAGCCTAACAACAACC+AGG + chr8_2:44711617-44711636 Msa1249750:intron 45.0%
GTGTGTGTGTGTGTGTGATA+AGG - chr8_2:44711684-44711703 None:intergenic 45.0%
! CCGCAATAGTGGTGTTAAGT+TGG + chr8_2:44712289-44712308 Msa1249750:intron 45.0%
AAATATGTGGGGAGCTTGGT+TGG + chr8_2:44712617-44712636 Msa1249750:intron 45.0%
GCCTAAGAGTTTCACTCGAT+TGG + chr8_2:44712735-44712754 Msa1249750:intron 45.0%
! ATTGGTAGTTTCACCCTAGC+AGG + chr8_2:44712753-44712772 Msa1249750:intron 45.0%
! TTGGTAGTTTCACCCTAGCA+GGG + chr8_2:44712754-44712773 Msa1249750:intron 45.0%
GTAACAGGAAACTGAGAGCT+TGG + chr8_2:44712996-44713015 Msa1249750:intron 45.0%
GCAATAGACCTCCTATTGTG+AGG - chr8_2:44713164-44713183 None:intergenic 45.0%
! GAGTGCTCTAGTATGGACTA+CGG + chr8_2:44713792-44713811 Msa1249750:intron 45.0%
TGCTATGCAAGCACCAAAGT+CGG - chr8_2:44713931-44713950 None:intergenic 45.0%
CTGTTCGCCTAATGTATGAC+CGG + chr8_2:44714035-44714054 Msa1249750:intron 45.0%
ATTGCAGCCGGTCATACATT+AGG - chr8_2:44714045-44714064 None:intergenic 45.0%
AATGTATGACCGGCTGCAAT+CGG + chr8_2:44714045-44714064 Msa1249750:intron 45.0%
ATATGGATCAGGTCCAATGG+TGG - chr8_2:44714085-44714104 None:intergenic 45.0%
CATAGGGCATGTCAAATGGT+TGG - chr8_2:44714193-44714212 None:intergenic 45.0%
CAACCATTTGACATGCCCTA+TGG + chr8_2:44714191-44714210 Msa1249750:intron 45.0%
AGACCATAGGGCATGTCAAA+TGG - chr8_2:44714197-44714216 None:intergenic 45.0%
TTTGACATGCCCTATGGTCT+TGG + chr8_2:44714197-44714216 Msa1249750:intron 45.0%
GCAGTACAACCAAGACCATA+GGG - chr8_2:44714209-44714228 None:intergenic 45.0%
TGCAGTACAACCAAGACCAT+AGG - chr8_2:44714210-44714229 None:intergenic 45.0%
GAACACAAACCCAGTTTCGA+AGG - chr8_2:44714282-44714301 None:intergenic 45.0%
TAGTAGAGCCATCTTTCAGC+AGG - chr8_2:44715027-44715046 None:intergenic 45.0%
! CAGGATCTGTTACTTCGACA+CGG - chr8_2:44715117-44715136 None:intergenic 45.0%
!! TCCTGCTGATTTCACTGTCA+AGG + chr8_2:44715132-44715151 Msa1249750:CDS 45.0%
TCCTTGACAGTGAAATCAGC+AGG - chr8_2:44715136-44715155 None:intergenic 45.0%
GACCTTTAGATCTCATGCAC+TGG + chr8_2:44715447-44715466 Msa1249750:three_prime_UTR 45.0%
!! AAAAATAATTATTGAAAAAT+TGG - chr8_2:44714720-44714739 None:intergenic 5.0%
! ATTATGGCGGAGGCAAAACC+TGG + chr8_2:44710725-44710744 Msa1249750:CDS 50.0%
! AAGGTCGGCTTTCTCAATCC+AGG - chr8_2:44710746-44710765 None:intergenic 50.0%
GAGAAAGCCGACCTTCACTA+AGG + chr8_2:44710751-44710770 Msa1249750:CDS 50.0%
TAAGGTCGATCAGCTTCGAC+CGG + chr8_2:44710769-44710788 Msa1249750:CDS 50.0%
TCAGCAATTCGCATCTGACG+AGG - chr8_2:44710875-44710894 None:intergenic 50.0%
! AGTTTGGTGGGTGATGAGAC+TGG + chr8_2:44710896-44710915 Msa1249750:CDS 50.0%
! GTTTGGTGGGTGATGAGACT+GGG + chr8_2:44710897-44710916 Msa1249750:CDS 50.0%
!! AGTGGTGTTATGGGGAGAAG+TGG + chr8_2:44711138-44711157 Msa1249750:intron 50.0%
! TTTTACTCGGAGACGCAGCT+TGG + chr8_2:44711824-44711843 Msa1249750:intron 50.0%
GTCTGCTTTGGTGAGAGGAA+AGG - chr8_2:44712203-44712222 None:intergenic 50.0%
!! GAACATCAAAGGGCTAGCCT+TGG - chr8_2:44712225-44712244 None:intergenic 50.0%
CACTCACTGTAGGGCCTATT+TGG + chr8_2:44712489-44712508 Msa1249750:intron 50.0%
TCACTCATGGGAAAGAGCCA+TGG - chr8_2:44712665-44712684 None:intergenic 50.0%
ACACATGCTCAACCCTGCTA+GGG - chr8_2:44712769-44712788 None:intergenic 50.0%
CACACATTCTCTGTCCCAAC+AGG + chr8_2:44713095-44713114 Msa1249750:intron 50.0%
GAGGACTGAGGACCTATTCT+AGG - chr8_2:44713145-44713164 None:intergenic 50.0%
AGGTCCTCAGTCCTCACAAT+AGG + chr8_2:44713150-44713169 Msa1249750:intron 50.0%
TCCTCAGTCCTCACAATAGG+AGG + chr8_2:44713153-44713172 Msa1249750:intron 50.0%
ACCTCCTATTGTGAGGACTG+AGG - chr8_2:44713157-44713176 None:intergenic 50.0%
TCGATTGCACCTAAGGAGGT+CGG - chr8_2:44713833-44713852 None:intergenic 50.0%
TGGTTCGATTGCACCTAAGG+AGG - chr8_2:44713837-44713856 None:intergenic 50.0%
CTGTAGCTGACAGTTGGGTA+TGG - chr8_2:44713863-44713882 None:intergenic 50.0%
GGAGTCTGTAGCTGACAGTT+GGG - chr8_2:44713868-44713887 None:intergenic 50.0%
TGGAGTCTGTAGCTGACAGT+TGG - chr8_2:44713869-44713888 None:intergenic 50.0%
! CCAGCAGCCGTTGTGATTTT+TGG - chr8_2:44713889-44713908 None:intergenic 50.0%
CCAAAAATCACAACGGCTGC+TGG + chr8_2:44713886-44713905 Msa1249750:intron 50.0%
! ATCACAACGGCTGCTGGTTA+TGG + chr8_2:44713892-44713911 Msa1249750:intron 50.0%
TATGCAAGCACCAAAGTCGG+AGG - chr8_2:44713928-44713947 None:intergenic 50.0%
!! TTTGGTGCTTGCATAGCACC+TGG + chr8_2:44713933-44713952 Msa1249750:intron 50.0%
! TTGGTGCTTGCATAGCACCT+GGG + chr8_2:44713934-44713953 Msa1249750:intron 50.0%
TTGACAGAGACGGTAGGTTG+TGG - chr8_2:44713974-44713993 None:intergenic 50.0%
TGCAGTTTGACAGAGACGGT+AGG - chr8_2:44713980-44713999 None:intergenic 50.0%
CGGTCATACATTAGGCGAAC+AGG - chr8_2:44714037-44714056 None:intergenic 50.0%
GCATGTCAAATGGTTGGGAC+AGG - chr8_2:44714187-44714206 None:intergenic 50.0%
TCAGTCGACCTGCTGAAAGA+TGG + chr8_2:44715016-44715035 Msa1249750:intron 50.0%
!! AGGATCAATGAGGCTTGCTG+TGG + chr8_2:44715081-44715100 Msa1249750:CDS 50.0%
!! TGAGGCTTGCTGTGGACAAA+TGG + chr8_2:44715089-44715108 Msa1249750:CDS 50.0%
!! GAGGCTTGCTGTGGACAAAT+GGG + chr8_2:44715090-44715109 Msa1249750:CDS 50.0%
!! AGGCTTGCTGTGGACAAATG+GGG + chr8_2:44715091-44715110 Msa1249750:CDS 50.0%
AAGGTCGATCAGCTTCGACC+GGG + chr8_2:44710770-44710789 Msa1249750:CDS 55.0%
TGGCCACACTCTGACTGTCA+AGG + chr8_2:44710799-44710818 Msa1249750:CDS 55.0%
CCACCTTGACAGTCAGAGTG+TGG - chr8_2:44710805-44710824 None:intergenic 55.0%
CCACACTCTGACTGTCAAGG+TGG + chr8_2:44710802-44710821 Msa1249750:CDS 55.0%
ATTCGCATCTGACGAGGCTG+AGG - chr8_2:44710869-44710888 None:intergenic 55.0%
CATCTGTCAGCTCTTCCTCC+CGG - chr8_2:44711404-44711423 None:intergenic 55.0%
CCTTGGTCTGCTTTGGTGAG+AGG - chr8_2:44712208-44712227 None:intergenic 55.0%
CCTCTCACCAAAGCAGACCA+AGG + chr8_2:44712205-44712224 Msa1249750:intron 55.0%
CACACATGCTCAACCCTGCT+AGG - chr8_2:44712770-44712789 None:intergenic 55.0%
CTAGCAGGGTTGAGCATGTG+TGG + chr8_2:44712768-44712787 Msa1249750:intron 55.0%
!! GGAACTGGTTGGTAAGGGAG+AGG - chr8_2:44713022-44713041 None:intergenic 55.0%
ATTGCACCTAAGGAGGTCGG+GGG - chr8_2:44713830-44713849 None:intergenic 55.0%
GATTGCACCTAAGGAGGTCG+GGG - chr8_2:44713831-44713850 None:intergenic 55.0%
CGATTGCACCTAAGGAGGTC+GGG - chr8_2:44713832-44713851 None:intergenic 55.0%
! ACAACGGCTGCTGGTTATGG+CGG + chr8_2:44713895-44713914 Msa1249750:intron 55.0%
TGGAATTCTGATCCGCACCC+AGG - chr8_2:44713954-44713973 None:intergenic 55.0%
!! CCGTTAGTACCGATTGCAGC+CGG - chr8_2:44714057-44714076 None:intergenic 55.0%
CCGGCTGCAATCGGTACTAA+CGG + chr8_2:44714054-44714073 Msa1249750:intron 55.0%
CGGCTGCAATCGGTACTAAC+GGG + chr8_2:44714055-44714074 Msa1249750:intron 55.0%
CTGCAATCGGTACTAACGGG+AGG + chr8_2:44714058-44714077 Msa1249750:intron 55.0%
ACTAACGGGAGGTCCACCAT+TGG + chr8_2:44714069-44714088 Msa1249750:intron 55.0%
GGGTGCCCCAAATATGGATC+AGG - chr8_2:44714096-44714115 None:intergenic 55.0%
AGGTCGATCAGCTTCGACCG+GGG + chr8_2:44710771-44710790 Msa1249750:CDS 60.0%
AGAGTGTGGCCACTAGTCCC+CGG - chr8_2:44710791-44710810 None:intergenic 60.0%
TGACGAGGCTGAGGACCATC+GGG - chr8_2:44710860-44710879 None:intergenic 60.0%
CTGACGAGGCTGAGGACCAT+CGG - chr8_2:44710861-44710880 None:intergenic 60.0%
!! GGGCTAGCCTTGGTCTGCTT+TGG - chr8_2:44712215-44712234 None:intergenic 60.0%
! GCGTTGGCCGAAGTTGCTGT+AGG + chr8_2:44712933-44712952 Msa1249750:intron 60.0%
AGGAGGTCGGGGGTTTGGAT+AGG - chr8_2:44713820-44713839 None:intergenic 60.0%
TCCAAACCCCCGACCTCCTT+AGG + chr8_2:44713821-44713840 Msa1249750:intron 60.0%
ACCTAAGGAGGTCGGGGGTT+TGG - chr8_2:44713825-44713844 None:intergenic 60.0%
! CAACGGCTGCTGGTTATGGC+GGG + chr8_2:44713896-44713915 Msa1249750:intron 60.0%
GCTTGCATAGCACCTGGGTG+CGG + chr8_2:44713939-44713958 Msa1249750:intron 60.0%
CAGCTTCGACCGGGGACTAG+TGG + chr8_2:44710779-44710798 Msa1249750:CDS 65.0%
ATGCAGAAGGGCCGTCCCGA+TGG + chr8_2:44710842-44710861 Msa1249750:CDS 65.0%
GAGGCTGAGGACCATCGGGA+CGG - chr8_2:44710856-44710875 None:intergenic 65.0%
CGGGCGCACACCTCCGACTT+TGG + chr8_2:44713915-44713934 Msa1249750:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 44710358 44715660 44710358 ID=Msa1249750;Name=Msa1249750
chr8_2 mRNA 44710358 44715660 44710358 ID=Msa1249750-mRNA-1;Parent=Msa1249750;Name=Msa1249750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|1|1|0.5|1|3|453|162
chr8_2 exon 44710358 44710426 44710358 ID=Msa1249750-mRNA-1:exon:13548;Parent=Msa1249750-mRNA-1
chr8_2 exon 44710719 44710950 44710719 ID=Msa1249750-mRNA-1:exon:13549;Parent=Msa1249750-mRNA-1
chr8_2 exon 44715020 44715660 44715020 ID=Msa1249750-mRNA-1:exon:13550;Parent=Msa1249750-mRNA-1
chr8_2 CDS 44710358 44710426 44710358 ID=Msa1249750-mRNA-1:cds;Parent=Msa1249750-mRNA-1
chr8_2 CDS 44710719 44710950 44710719 ID=Msa1249750-mRNA-1:cds;Parent=Msa1249750-mRNA-1
chr8_2 CDS 44715020 44715207 44715020 ID=Msa1249750-mRNA-1:cds;Parent=Msa1249750-mRNA-1
chr8_2 three_prime_UTR 44715208 44715660 44715208 ID=Msa1249750-mRNA-1:three_prime_utr;Parent=Msa1249750-mRNA-1
Gene Sequence

>Msa1249750

GGCTACGTTTCACTTTTCATTTTCAGATCTCTTTTTGCCTTTGCAGTTTCACTTCCAGTTTCATTTCAGGTTAAGATTATGGCGGAGGCAAAACCTGGATTGAGAAAGCCGACCTTCACTAAGGTCGATCAGCTTCGACCGGGGACTAGTGGCCACACTCTGACTGTCAAGGTGGTGAATACTAAGATGGTGATGCAGAAGGGCCGTCCCGATGGTCCTCAGCCTCGTCAGATGCGAATTGCTGAAAGTTTGGTGGGTGATGAGACTGGGATGATCATCTTTACTGCAAGAAATGATCAAGTCGACCTGCTGAAAGATGGCTCTACTATCATTCTGCGAAATGCAAAAATTGACATGTTTAAAGGATCAATGAGGCTTGCTGTGGACAAATGGGGCCGTGTCGAAGTAACAGATCCTGCTGATTTCACTGTCAAGGAAGACAACAACCTGTCCCTTATTGAATATGAACTTGTTAATGTTGTGGAGTAA
Protein sequence

>Msa1249750

GYVSLFIFRSLFAFAVSLPVSFQVKIMAEAKPGLRKPTFTKVDQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLSLIEYELVNVVE*