AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0147680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147680 MtrunA17_Chr1g0157061 97.727 220 5 0 36 255 22 241 1.03e-160 445
Msa0147680 MtrunA17_Chr7g0271001 63.347 251 91 1 6 255 4 254 7.77e-121 345
Msa0147680 MtrunA17_Chr1g0193631 68.103 232 73 1 25 255 26 257 9.01e-121 345
Msa0147680 MtrunA17_Chr3g0128801 68.000 225 69 2 28 252 30 251 5.06e-116 332
Msa0147680 MtrunA17_Chr3g0128791 63.454 249 86 3 2 250 6 249 5.06e-116 332
Msa0147680 MtrunA17_Chr4g0042521 64.730 241 81 3 11 250 6 243 1.69e-115 331
Msa0147680 MtrunA17_Chr5g0417701 61.382 246 92 2 5 250 1 243 8.74e-113 324
Msa0147680 MtrunA17_Chr5g0432611 63.265 245 82 3 10 249 5 246 1.38e-111 321
Msa0147680 MtrunA17_Chr3g0092071 64.912 228 76 3 28 255 24 247 1.03e-110 318
Msa0147680 MtrunA17_Chr7g0238681 65.778 225 74 2 29 252 32 254 1.06e-108 314
Msa0147680 MtrunA17_Chr5g0435311 64.069 231 80 2 23 252 76 304 7.52e-108 313
Msa0147680 MtrunA17_Chr3g0107291 64.463 242 81 3 10 249 17 255 3.21e-107 310
Msa0147680 MtrunA17_Chr3g0107311 64.463 242 81 3 10 249 11 249 4.28e-107 310
Msa0147680 MtrunA17_Chr2g0328261 57.812 256 102 3 1 252 3 256 1.81e-106 308
Msa0147680 MtrunA17_Chr7g0217661 58.400 250 90 5 5 252 1 238 1.27e-101 295
Msa0147680 MtrunA17_Chr4g0031621 58.498 253 101 3 1 252 5 254 2.47e-97 285
Msa0147680 MtrunA17_Chr6g0453341 58.167 251 91 4 5 252 11 250 9.26e-95 278
Msa0147680 MtrunA17_Chr7g0218741 55.459 229 96 4 29 255 29 253 8.71e-91 268
Msa0147680 MtrunA17_Chr8g0360041 52.609 230 104 3 27 255 29 254 2.99e-86 257
Msa0147680 MtrunA17_Chr7g0218751 50.980 255 117 4 5 255 1 251 2.48e-85 254
Msa0147680 MtrunA17_Chr5g0398271 49.801 251 119 5 7 255 17 262 1.69e-84 253
Msa0147680 MtrunA17_Chr7g0218761 56.459 209 86 3 48 255 8 212 1.99e-83 248
Msa0147680 MtrunA17_Chr8g0360721 55.981 209 87 3 48 255 17 221 1.61e-81 244
Msa0147680 MtrunA17_Chr4g0069711 48.511 235 115 4 20 252 52 282 3.10e-81 245
Msa0147680 MtrunA17_Chr4g0057091 48.016 252 126 3 5 255 14 261 2.81e-80 242
Msa0147680 MtrunA17_Chr5g0433841 50.893 224 108 1 29 252 41 262 1.89e-79 240
Msa0147680 MtrunA17_Chr3g0109801 48.707 232 113 4 27 252 51 282 4.15e-74 227
Msa0147680 MtrunA17_Chr4g0021561 43.529 255 135 5 1 252 6 254 2.44e-73 224
Msa0147680 MtrunA17_Chr4g0022841 54.310 116 53 0 140 255 5 120 1.15e-39 133
Msa0147680 MtrunA17_Chr4g0022851 61.386 101 32 3 27 126 30 124 8.24e-35 121
Msa0147680 MtrunA17_Chr2g0324191 36.774 155 92 3 1 154 3 152 3.66e-33 118
Msa0147680 MtrunA17_Chr8g0359981 56.471 85 31 2 71 154 2 81 3.58e-31 112
Msa0147680 MtrunA17_Chr2g0324221 30.544 239 139 9 29 255 35 258 1.35e-28 109
Msa0147680 MtrunA17_Chr2g0324181 47.475 99 52 0 154 252 17 115 7.03e-28 103
Msa0147680 MtrunA17_Chr4g0021641 31.799 239 136 10 29 255 41 264 2.45e-27 106
Msa0147680 MtrunA17_Chr2g0324201 29.368 269 153 11 4 255 8 256 4.28e-27 105
Msa0147680 MtrunA17_Chr8g0359971 53.659 82 37 1 175 255 1 82 4.08e-24 92.4
Msa0147680 MtrunA17_Chr1g0193571 65.517 58 20 0 198 255 3 60 1.81e-21 85.1
Msa0147680 MtrunA17_Chr7g0231211 30.290 241 139 13 24 251 42 266 1.17e-20 88.2
Msa0147680 MtrunA17_Chr4g0012801 27.839 273 152 12 7 255 13 264 2.69e-20 87.4
Msa0147680 MtrunA17_Chr7g0231221 28.452 239 138 12 34 255 53 275 1.13e-17 80.1
Msa0147680 MtrunA17_Chr4g0055561 24.803 254 169 11 12 255 9 250 1.18e-16 77.0
Msa0147680 MtrunA17_Chr5g0399811 24.242 231 157 9 32 255 32 251 3.16e-15 73.2
Msa0147680 MtrunA17_Chr4g0038741 27.111 225 142 9 40 255 32 243 1.38e-14 71.6
Msa0147680 MtrunA17_Chr4g0055601 23.605 233 161 8 29 254 28 250 5.09e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147680 AT1G20190.1 78.541 233 50 0 23 255 20 252 1.31e-141 397
Msa0147680 AT4G01630.1 63.672 256 91 2 1 255 1 255 1.38e-119 342
Msa0147680 AT1G20190.2 78.125 192 42 0 64 255 2 193 3.74e-116 331
Msa0147680 AT2G37640.1 68.000 225 69 2 29 252 36 258 1.30e-112 324
Msa0147680 AT1G69530.2 60.800 250 93 3 1 250 1 245 1.77e-112 323
Msa0147680 AT1G69530.1 60.800 250 93 3 1 250 1 245 1.77e-112 323
Msa0147680 AT1G69530.3 60.317 252 95 3 1 252 1 247 1.90e-112 324
Msa0147680 AT5G05290.1 60.800 250 92 4 2 250 7 251 4.15e-112 323
Msa0147680 AT2G40610.1 66.816 223 70 3 28 249 29 248 7.68e-111 320
Msa0147680 AT2G03090.1 60.000 250 93 4 5 252 6 250 9.00e-110 317
Msa0147680 AT2G39700.1 64.783 230 78 2 24 252 26 253 1.22e-109 317
Msa0147680 AT5G56320.1 59.200 250 96 3 3 252 6 249 1.41e-107 311
Msa0147680 AT5G56320.2 59.200 250 96 3 3 252 6 249 1.41e-107 311
Msa0147680 AT5G02260.1 57.874 254 100 4 3 252 4 254 7.15e-107 310
Msa0147680 AT5G56320.3 59.200 250 96 3 3 252 6 249 9.49e-107 311
Msa0147680 AT3G55500.1 62.771 231 83 2 23 252 28 256 2.31e-106 308
Msa0147680 AT2G28950.1 60.400 250 95 3 4 252 7 253 2.97e-105 305
Msa0147680 AT1G26770.1 60.000 250 94 3 1 250 1 244 1.01e-104 304
Msa0147680 AT1G26770.2 60.000 250 94 3 1 250 11 254 1.55e-104 304
Msa0147680 AT3G29030.1 61.261 222 76 2 29 250 38 249 1.01e-102 299
Msa0147680 AT2G37640.2 65.865 208 68 2 46 252 28 233 5.46e-100 291
Msa0147680 AT1G69530.5 57.576 231 91 4 1 231 1 224 4.96e-95 279
Msa0147680 AT1G69530.4 61.321 212 77 3 1 212 1 207 2.52e-94 276
Msa0147680 AT3G15370.1 50.781 256 106 6 1 252 8 247 1.84e-90 268
Msa0147680 AT5G39310.1 52.174 230 104 4 27 255 88 312 3.20e-87 262
Msa0147680 AT5G39290.1 54.185 227 99 3 29 255 58 279 5.41e-87 260
Msa0147680 AT5G39270.1 53.275 229 102 3 27 255 56 279 9.63e-87 259
Msa0147680 AT5G39300.1 51.965 229 105 3 27 255 53 276 2.66e-86 258
Msa0147680 AT5G39280.1 52.402 229 104 3 27 255 52 275 3.98e-86 258
Msa0147680 AT3G15370.2 45.455 286 106 7 1 252 8 277 6.29e-84 252
Msa0147680 AT1G12560.1 50.644 233 111 3 24 255 32 261 1.06e-83 251
Msa0147680 AT3G03220.1 49.107 224 112 1 29 252 40 261 1.42e-75 230
Msa0147680 AT1G62980.1 44.488 254 135 4 3 255 8 256 2.96e-75 229
Msa0147680 AT5G39260.1 49.565 230 105 4 27 255 43 262 1.52e-72 223
Msa0147680 AT4G38210.1 40.891 247 138 4 12 252 8 252 1.04e-62 197
Msa0147680 AT4G28250.1 29.851 268 160 9 1 255 8 260 1.64e-30 114
Msa0147680 AT2G20750.1 34.252 254 138 13 17 255 28 267 2.76e-29 111
Msa0147680 AT4G28250.2 28.839 267 158 9 1 255 8 254 3.50e-27 105
Msa0147680 AT1G65680.1 28.740 254 151 11 17 255 35 273 5.51e-22 92.4
Msa0147680 AT2G20750.2 34.043 188 101 8 17 193 28 203 4.19e-19 83.6
Msa0147680 AT4G28250.4 27.885 208 120 7 1 198 8 195 1.86e-17 79.0
Msa0147680 AT2G45110.1 26.172 256 156 10 16 255 21 259 1.21e-16 77.4
Msa0147680 AT4G28250.3 28.079 203 116 7 1 193 8 190 1.25e-16 76.6
Msa0147680 AT3G60570.1 23.482 247 160 7 22 255 27 257 1.79e-15 74.3
Msa0147680 AT4G17030.1 25.106 235 158 8 26 253 24 247 2.71e-15 73.6
Msa0147680 AT1G65681.1 24.444 225 142 9 44 255 13 222 3.19e-15 72.8
Msa0147680 AT3G45960.2 26.818 220 127 11 52 255 46 247 4.10e-12 65.1
Msa0147680 AT4G38400.1 25.581 215 136 9 52 255 47 248 4.14e-12 65.1
Msa0147680 AT3G45960.1 27.830 212 119 12 60 255 6 199 4.47e-11 61.2
Msa0147680 AT3G60570.2 23.318 223 140 8 47 255 4 209 7.46e-11 60.8

Find 66 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCAAAGTTATGTTTATTT+TGG 0.046470 1_4:-7742646 Msa0147680:CDS
ATCCAATCTGTTTCCATTAA+AGG 0.093347 1_4:-7741128 Msa0147680:CDS
GTTCCTTCCAATTGGGAATT+TGG 0.137567 1_4:-7740972 Msa0147680:CDS
GGATGGCTATGTCAAGAAAT+TGG 0.226118 1_4:-7741091 Msa0147680:CDS
TCCTATGCCTTCAAAGCTTC+TGG 0.234899 1_4:-7742588 Msa0147680:CDS
AATTGGAAGGAACAATGTTT+TGG 0.262015 1_4:+7740982 None:intergenic
CATAGCCATCCAATCAGTTT+TGG 0.278389 1_4:+7741103 None:intergenic
GACCCCAGATGGTGCATAAA+AGG 0.313282 1_4:-7742129 Msa0147680:CDS
CAAGAAATTGGGGTGCAAAT+TGG 0.319801 1_4:-7741079 Msa0147680:CDS
AAAACATTGTTCCTTCCAAT+TGG 0.325428 1_4:-7740980 Msa0147680:CDS
TCGTTTGGAAGATCAAAATT+AGG 0.329069 1_4:+7742069 None:intergenic
ACAGAAATTTGTGGCTGTTA+TGG 0.346098 1_4:+7742095 None:intergenic
GCCATATCAAAATGCTTTAG+AGG 0.358797 1_4:+7742024 None:intergenic
CAATCTAATGCTTATTTGAA+TGG 0.361539 1_4:-7741056 Msa0147680:CDS
GCAGGAGGAGCTTGTGGTTA+TGG 0.372980 1_4:-7742264 Msa0147680:intron
AACCTTTAATGGAAACAGAT+TGG 0.387190 1_4:+7741126 None:intergenic
TATGGAAATCTATATTCAAC+GGG 0.392318 1_4:-7742246 Msa0147680:CDS
AGTACTGCTTTGTTTAATGA+TGG 0.399136 1_4:-7742198 Msa0147680:CDS
AATCTATATTCAACGGGGTA+TGG 0.399794 1_4:-7742240 Msa0147680:CDS
TTAAAGGTTCCAAAACTGAT+TGG 0.401631 1_4:-7741112 Msa0147680:CDS
TGATATGGCACAACCTGCTT+GGG 0.402518 1_4:-7742010 Msa0147680:CDS
CACCAACCTCCATCATCGTT+TGG 0.404830 1_4:+7742054 None:intergenic
AAACATTGTTCCTTCCAATT+GGG 0.415555 1_4:-7740979 Msa0147680:CDS
TAGTGATGCAGAAGGCACTA+TGG 0.416704 1_4:-7742532 Msa0147680:CDS
ATCAGCAATCTGGCTGGTGC+TGG 0.426311 1_4:-7741155 Msa0147680:CDS
GGAGTTAGGTTCAGTGTGAA+TGG 0.426417 1_4:-7741203 Msa0147680:CDS
GATGGCTATGTCAAGAAATT+GGG 0.440562 1_4:-7741090 Msa0147680:CDS
GGTCCATCCAGAAGCTTTGA+AGG 0.448252 1_4:+7742581 None:intergenic
TTTGATCTTCCAAACGATGA+TGG 0.448767 1_4:-7742063 Msa0147680:CDS
TTGATATGGCACAACCTGCT+TGG 0.457983 1_4:-7742011 Msa0147680:CDS
ATCAGTAGTTGTGACCTTGA+AGG 0.458996 1_4:+7741022 None:intergenic
CAACCTGCTTGGGAAAAGAT+TGG 0.464220 1_4:-7742000 Msa0147680:CDS
GGATCTTGCTAGAGAAAGAT+TGG 0.465897 1_4:+7740949 None:intergenic
GTTAGTGTTGATCAGCAATC+TGG 0.470023 1_4:-7741165 Msa0147680:CDS
TGGTCAATCTATGTCCTTCA+AGG 0.475974 1_4:-7741036 Msa0147680:CDS
AGATTGGCCAAATTCCCAAT+TGG 0.482710 1_4:+7740965 None:intergenic
TCTAACCTTTGGAATAAGAC+AGG 0.485412 1_4:+7741955 None:intergenic
ATCTATATTCAACGGGGTAT+GGG 0.496489 1_4:-7742239 Msa0147680:CDS
GCCCAAAATAAACATAACTT+TGG 0.499632 1_4:+7742644 None:intergenic
TTCAAGGTCACAACTACTGA+TGG 0.534151 1_4:-7741020 Msa0147680:CDS
AGGTTCCAAAACTGATTGGA+TGG 0.535558 1_4:-7741108 Msa0147680:CDS
ATTAGGAGGACAGAAATTTG+TGG 0.544003 1_4:+7742086 None:intergenic
TTAGGTTCAGTGTGAATGGA+AGG 0.549239 1_4:-7741199 Msa0147680:CDS
AGTGATGCAGAAGGCACTAT+GGG 0.562895 1_4:-7742531 Msa0147680:intron
TGGCCAAATTCCCAATTGGA+AGG 0.568133 1_4:+7740969 None:intergenic
TCGTCCCTGTCTTATTCCAA+AGG 0.569211 1_4:-7741960 Msa0147680:intron
TTTGGAAGATCAAAATTAGG+AGG 0.572235 1_4:+7742072 None:intergenic
TATCAAAATGCTTTAGAGGT+GGG 0.577409 1_4:+7742028 None:intergenic
TTCCAAACGATGATGGAGGT+TGG 0.580570 1_4:-7742056 Msa0147680:CDS
GTGTTGATCAGCAATCTGGC+TGG 0.582992 1_4:-7741161 Msa0147680:CDS
TTATGGAAATCTATATTCAA+CGG 0.585825 1_4:-7742247 Msa0147680:CDS
ATGCCTTCAAAGCTTCTGGA+TGG 0.586668 1_4:-7742584 Msa0147680:CDS
AAGATTGGAATCTACAGAGG+AGG 0.589893 1_4:-7741985 Msa0147680:CDS
TTTAATGATGGAGCTTCATG+TGG 0.590206 1_4:-7742186 Msa0147680:CDS
CTAACCTTTGGAATAAGACA+GGG 0.602543 1_4:+7741956 None:intergenic
ATATCAAAATGCTTTAGAGG+TGG 0.603348 1_4:+7742027 None:intergenic
ATTATAAGACAGACCCCAGA+TGG 0.606326 1_4:-7742140 Msa0147680:CDS
GATCTTCCAAACGATGATGG+AGG 0.607048 1_4:-7742060 Msa0147680:CDS
TGTGATGCAGGAGGAGCTTG+TGG 0.625862 1_4:-7742270 Msa0147680:intron
AGATTGGAATCTACAGAGGA+GGG 0.626103 1_4:-7741984 Msa0147680:CDS
TCCAGAAGCTTTGAAGGCAT+AGG 0.644558 1_4:+7742587 None:intergenic
TAGGTTCAGTGTGAATGGAA+GGG 0.653972 1_4:-7741198 Msa0147680:CDS
GAAAAGATTGGAATCTACAG+AGG 0.666370 1_4:-7741988 Msa0147680:CDS
ATGGCTATGTCAAGAAATTG+GGG 0.694107 1_4:-7741089 Msa0147680:CDS
TTAATGATGGAGCTTCATGT+GGG 0.742051 1_4:-7742185 Msa0147680:CDS
ATGGAAATCTATATTCAACG+GGG 0.807681 1_4:-7742245 Msa0147680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTGTTTTGATATTTT+TGG - chr1_4:7742337-7742356 Msa0147680:intron 10.0%
!!! AAAATTGTTTTGATATTTTT+GGG - chr1_4:7742338-7742357 Msa0147680:intron 10.0%
!!! TAAAATTGTTTTGATATTTT+TGG - chr1_4:7742337-7742356 Msa0147680:intron 10.0%
!!! AAAATTGTTTTGATATTTTT+GGG - chr1_4:7742338-7742357 Msa0147680:intron 10.0%
!! TATATTCATTAATCATCAAA+TGG + chr1_4:7741874-7741893 None:intergenic 15.0%
!!! TTTATACACAAATTATGTTT+TGG - chr1_4:7741979-7741998 Msa0147680:CDS 15.0%
!! ATTAACACAGTTTAAAAATT+GGG + chr1_4:7742163-7742182 None:intergenic 15.0%
!! TATATTCATTAATCATCAAA+TGG + chr1_4:7741874-7741893 None:intergenic 15.0%
!!! TTTATACACAAATTATGTTT+TGG - chr1_4:7741979-7741998 Msa0147680:CDS 15.0%
!! ATTAACACAGTTTAAAAATT+GGG + chr1_4:7742163-7742182 None:intergenic 15.0%
!!! ACCAAAGTTATGTTTATTTT+GGG - chr1_4:7740944-7740963 Msa0147680:CDS 20.0%
!! AGAAATAAAATGTTGAAAAG+TGG + chr1_4:7741099-7741118 None:intergenic 20.0%
!! TTATGGAAATCTATATTCAA+CGG - chr1_4:7741342-7741361 Msa0147680:intron 20.0%
!!! CAAATTTGAAACAATTTAGA+TGG - chr1_4:7741816-7741835 Msa0147680:intron 20.0%
!!! GTTAAAGCATTTTAAATATG+TGG - chr1_4:7741838-7741857 Msa0147680:intron 20.0%
!!! ATTTAATCACTTTAAAATCG+TGG - chr1_4:7742061-7742080 Msa0147680:CDS 20.0%
!! ATTGGGTTAATTATGTTTAA+TGG + chr1_4:7742146-7742165 None:intergenic 20.0%
!! GATTAACACAGTTTAAAAAT+TGG + chr1_4:7742164-7742183 None:intergenic 20.0%
!!! ATTATTTTCACAAATTGCAT+GGG + chr1_4:7742253-7742272 None:intergenic 20.0%
!!! ACCAAAGTTATGTTTATTTT+GGG - chr1_4:7740944-7740963 Msa0147680:CDS 20.0%
!! AGAAATAAAATGTTGAAAAG+TGG + chr1_4:7741099-7741118 None:intergenic 20.0%
!! TTATGGAAATCTATATTCAA+CGG - chr1_4:7741342-7741361 Msa0147680:intron 20.0%
!!! CAAATTTGAAACAATTTAGA+TGG - chr1_4:7741816-7741835 Msa0147680:intron 20.0%
!!! GTTAAAGCATTTTAAATATG+TGG - chr1_4:7741838-7741857 Msa0147680:intron 20.0%
!!! ATTTAATCACTTTAAAATCG+TGG - chr1_4:7742061-7742080 Msa0147680:CDS 20.0%
!! ATTGGGTTAATTATGTTTAA+TGG + chr1_4:7742146-7742165 None:intergenic 20.0%
!! GATTAACACAGTTTAAAAAT+TGG + chr1_4:7742164-7742183 None:intergenic 20.0%
!!! ATTATTTTCACAAATTGCAT+GGG + chr1_4:7742253-7742272 None:intergenic 20.0%
!! GACCAAAGTTATGTTTATTT+TGG - chr1_4:7740943-7740962 Msa0147680:CDS 25.0%
!! GAGTTGTTGAATATTGTTTT+AGG - chr1_4:7741242-7741261 Msa0147680:intron 25.0%
! TATGGAAATCTATATTCAAC+GGG - chr1_4:7741343-7741362 Msa0147680:intron 25.0%
!!! TTATTGCACTTTTTTATGAG+AGG + chr1_4:7741720-7741739 None:intergenic 25.0%
!!! ACATGTTATTAGTAGTTTTG+AGG - chr1_4:7741766-7741785 Msa0147680:intron 25.0%
!!! CATGTTATTAGTAGTTTTGA+GGG - chr1_4:7741767-7741786 Msa0147680:intron 25.0%
! GGTTAATTATGTTTAATGGA+TGG + chr1_4:7742142-7742161 None:intergenic 25.0%
!! GATTATTTTCACAAATTGCA+TGG + chr1_4:7742254-7742273 None:intergenic 25.0%
! TGTTCAGTAATTTAGTAGTT+AGG - chr1_4:7742302-7742321 Msa0147680:intron 25.0%
! CAATCTAATGCTTATTTGAA+TGG - chr1_4:7742533-7742552 Msa0147680:CDS 25.0%
!! GACCAAAGTTATGTTTATTT+TGG - chr1_4:7740943-7740962 Msa0147680:CDS 25.0%
!! GAGTTGTTGAATATTGTTTT+AGG - chr1_4:7741242-7741261 Msa0147680:intron 25.0%
! TATGGAAATCTATATTCAAC+GGG - chr1_4:7741343-7741362 Msa0147680:intron 25.0%
!!! TTATTGCACTTTTTTATGAG+AGG + chr1_4:7741720-7741739 None:intergenic 25.0%
!!! ACATGTTATTAGTAGTTTTG+AGG - chr1_4:7741766-7741785 Msa0147680:intron 25.0%
!!! CATGTTATTAGTAGTTTTGA+GGG - chr1_4:7741767-7741786 Msa0147680:intron 25.0%
! GGTTAATTATGTTTAATGGA+TGG + chr1_4:7742142-7742161 None:intergenic 25.0%
!! GATTATTTTCACAAATTGCA+TGG + chr1_4:7742254-7742273 None:intergenic 25.0%
! TGTTCAGTAATTTAGTAGTT+AGG - chr1_4:7742302-7742321 Msa0147680:intron 25.0%
! CAATCTAATGCTTATTTGAA+TGG - chr1_4:7742533-7742552 Msa0147680:CDS 25.0%
GCCCAAAATAAACATAACTT+TGG + chr1_4:7740948-7740967 None:intergenic 30.0%
ATAAAAAGTTGCATGAGCAT+TGG + chr1_4:7741032-7741051 None:intergenic 30.0%
! AATGCTCATGCAACTTTTTA+TGG - chr1_4:7741031-7741050 Msa0147680:CDS 30.0%
! ATGCTCATGCAACTTTTTAT+GGG - chr1_4:7741032-7741051 Msa0147680:CDS 30.0%
ATGGAAATCTATATTCAACG+GGG - chr1_4:7741344-7741363 Msa0147680:intron 30.0%
!! AGTACTGCTTTGTTTAATGA+TGG - chr1_4:7741391-7741410 Msa0147680:intron 30.0%
TTTGGAAGATCAAAATTAGG+AGG + chr1_4:7741520-7741539 None:intergenic 30.0%
TCGTTTGGAAGATCAAAATT+AGG + chr1_4:7741523-7741542 None:intergenic 30.0%
!! TATCAAAATGCTTTAGAGGT+GGG + chr1_4:7741564-7741583 None:intergenic 30.0%
!! ATATCAAAATGCTTTAGAGG+TGG + chr1_4:7741565-7741584 None:intergenic 30.0%
!!! ACCTCTAAAGCATTTTGATA+TGG - chr1_4:7741564-7741583 Msa0147680:intron 30.0%
CAGATCAAAATTCTAACCTT+TGG + chr1_4:7741648-7741667 None:intergenic 30.0%
TGTGGTTAATTGTTATGAGT+GGG + chr1_4:7741922-7741941 None:intergenic 30.0%
TTGTGGTTAATTGTTATGAG+TGG + chr1_4:7741923-7741942 None:intergenic 30.0%
!! GTTAAGGGTGTTTAAAATTG+TGG + chr1_4:7741940-7741959 None:intergenic 30.0%
TACTTGAAAATCGTCGTTAA+GGG + chr1_4:7741955-7741974 None:intergenic 30.0%
ATACTTGAAAATCGTCGTTA+AGG + chr1_4:7741956-7741975 None:intergenic 30.0%
!!! TTGTTTTGATATTTTTGGGC+AGG - chr1_4:7742342-7742361 Msa0147680:intron 30.0%
!!! TGTTTTGATATTTTTGGGCA+GGG - chr1_4:7742343-7742362 Msa0147680:intron 30.0%
ATCCAATCTGTTTCCATTAA+AGG - chr1_4:7742461-7742480 Msa0147680:intron 30.0%
AACCTTTAATGGAAACAGAT+TGG + chr1_4:7742466-7742485 None:intergenic 30.0%
!!! ATCAGTTTTGGAACCTTTAA+TGG + chr1_4:7742477-7742496 None:intergenic 30.0%
TTAAAGGTTCCAAAACTGAT+TGG - chr1_4:7742477-7742496 Msa0147680:intron 30.0%
!!! AACAATGTTTTGGAAAGTTC+TGG + chr1_4:7742600-7742619 None:intergenic 30.0%
! AATTGGAAGGAACAATGTTT+TGG + chr1_4:7742610-7742629 None:intergenic 30.0%
AAAACATTGTTCCTTCCAAT+TGG - chr1_4:7742609-7742628 Msa0147680:CDS 30.0%
AAACATTGTTCCTTCCAATT+GGG - chr1_4:7742610-7742629 Msa0147680:CDS 30.0%
GCCCAAAATAAACATAACTT+TGG + chr1_4:7740948-7740967 None:intergenic 30.0%
ATAAAAAGTTGCATGAGCAT+TGG + chr1_4:7741032-7741051 None:intergenic 30.0%
! AATGCTCATGCAACTTTTTA+TGG - chr1_4:7741031-7741050 Msa0147680:CDS 30.0%
! ATGCTCATGCAACTTTTTAT+GGG - chr1_4:7741032-7741051 Msa0147680:CDS 30.0%
ATGGAAATCTATATTCAACG+GGG - chr1_4:7741344-7741363 Msa0147680:intron 30.0%
!! AGTACTGCTTTGTTTAATGA+TGG - chr1_4:7741391-7741410 Msa0147680:intron 30.0%
TTTGGAAGATCAAAATTAGG+AGG + chr1_4:7741520-7741539 None:intergenic 30.0%
TCGTTTGGAAGATCAAAATT+AGG + chr1_4:7741523-7741542 None:intergenic 30.0%
!! TATCAAAATGCTTTAGAGGT+GGG + chr1_4:7741564-7741583 None:intergenic 30.0%
!! ATATCAAAATGCTTTAGAGG+TGG + chr1_4:7741565-7741584 None:intergenic 30.0%
!!! ACCTCTAAAGCATTTTGATA+TGG - chr1_4:7741564-7741583 Msa0147680:intron 30.0%
CAGATCAAAATTCTAACCTT+TGG + chr1_4:7741648-7741667 None:intergenic 30.0%
TGTGGTTAATTGTTATGAGT+GGG + chr1_4:7741922-7741941 None:intergenic 30.0%
TTGTGGTTAATTGTTATGAG+TGG + chr1_4:7741923-7741942 None:intergenic 30.0%
!! GTTAAGGGTGTTTAAAATTG+TGG + chr1_4:7741940-7741959 None:intergenic 30.0%
TACTTGAAAATCGTCGTTAA+GGG + chr1_4:7741955-7741974 None:intergenic 30.0%
ATACTTGAAAATCGTCGTTA+AGG + chr1_4:7741956-7741975 None:intergenic 30.0%
!!! TTGTTTTGATATTTTTGGGC+AGG - chr1_4:7742342-7742361 Msa0147680:intron 30.0%
!!! TGTTTTGATATTTTTGGGCA+GGG - chr1_4:7742343-7742362 Msa0147680:intron 30.0%
ATCCAATCTGTTTCCATTAA+AGG - chr1_4:7742461-7742480 Msa0147680:intron 30.0%
AACCTTTAATGGAAACAGAT+TGG + chr1_4:7742466-7742485 None:intergenic 30.0%
!!! ATCAGTTTTGGAACCTTTAA+TGG + chr1_4:7742477-7742496 None:intergenic 30.0%
TTAAAGGTTCCAAAACTGAT+TGG - chr1_4:7742477-7742496 Msa0147680:intron 30.0%
!!! AACAATGTTTTGGAAAGTTC+TGG + chr1_4:7742600-7742619 None:intergenic 30.0%
! AATTGGAAGGAACAATGTTT+TGG + chr1_4:7742610-7742629 None:intergenic 30.0%
AAAACATTGTTCCTTCCAAT+TGG - chr1_4:7742609-7742628 Msa0147680:CDS 30.0%
AAACATTGTTCCTTCCAATT+GGG - chr1_4:7742610-7742629 Msa0147680:CDS 30.0%
!!! TTTATTTTGGGCACACTCAT+TGG - chr1_4:7740956-7740975 Msa0147680:CDS 35.0%
! TGCTCATGCAACTTTTTATG+GGG - chr1_4:7741033-7741052 Msa0147680:CDS 35.0%
CATTTGAATATGTGTGATGC+AGG - chr1_4:7741307-7741326 Msa0147680:intron 35.0%
AATCTATATTCAACGGGGTA+TGG - chr1_4:7741349-7741368 Msa0147680:intron 35.0%
ATCTATATTCAACGGGGTAT+GGG - chr1_4:7741350-7741369 Msa0147680:intron 35.0%
! TTTAATGATGGAGCTTCATG+TGG - chr1_4:7741403-7741422 Msa0147680:intron 35.0%
! TTAATGATGGAGCTTCATGT+GGG - chr1_4:7741404-7741423 Msa0147680:intron 35.0%
ACAGAAATTTGTGGCTGTTA+TGG + chr1_4:7741497-7741516 None:intergenic 35.0%
ATTAGGAGGACAGAAATTTG+TGG + chr1_4:7741506-7741525 None:intergenic 35.0%
TTTGATCTTCCAAACGATGA+TGG - chr1_4:7741526-7741545 Msa0147680:intron 35.0%
GCCATATCAAAATGCTTTAG+AGG + chr1_4:7741568-7741587 None:intergenic 35.0%
GAAAAGATTGGAATCTACAG+AGG - chr1_4:7741601-7741620 Msa0147680:intron 35.0%
!! CTAACCTTTGGAATAAGACA+GGG + chr1_4:7741636-7741655 None:intergenic 35.0%
!! TCTAACCTTTGGAATAAGAC+AGG + chr1_4:7741637-7741656 None:intergenic 35.0%
TCTGTGCTACATCTTATCTT+AGG - chr1_4:7741664-7741683 Msa0147680:intron 35.0%
GATGGCTATGTCAAGAAATT+GGG - chr1_4:7742499-7742518 Msa0147680:intron 35.0%
ATGGCTATGTCAAGAAATTG+GGG - chr1_4:7742500-7742519 Msa0147680:intron 35.0%
!!! TTTATTTTGGGCACACTCAT+TGG - chr1_4:7740956-7740975 Msa0147680:CDS 35.0%
! TGCTCATGCAACTTTTTATG+GGG - chr1_4:7741033-7741052 Msa0147680:CDS 35.0%
CATTTGAATATGTGTGATGC+AGG - chr1_4:7741307-7741326 Msa0147680:intron 35.0%
AATCTATATTCAACGGGGTA+TGG - chr1_4:7741349-7741368 Msa0147680:intron 35.0%
ATCTATATTCAACGGGGTAT+GGG - chr1_4:7741350-7741369 Msa0147680:intron 35.0%
! TTTAATGATGGAGCTTCATG+TGG - chr1_4:7741403-7741422 Msa0147680:intron 35.0%
! TTAATGATGGAGCTTCATGT+GGG - chr1_4:7741404-7741423 Msa0147680:intron 35.0%
ACAGAAATTTGTGGCTGTTA+TGG + chr1_4:7741497-7741516 None:intergenic 35.0%
ATTAGGAGGACAGAAATTTG+TGG + chr1_4:7741506-7741525 None:intergenic 35.0%
TTTGATCTTCCAAACGATGA+TGG - chr1_4:7741526-7741545 Msa0147680:intron 35.0%
GCCATATCAAAATGCTTTAG+AGG + chr1_4:7741568-7741587 None:intergenic 35.0%
GAAAAGATTGGAATCTACAG+AGG - chr1_4:7741601-7741620 Msa0147680:intron 35.0%
!! CTAACCTTTGGAATAAGACA+GGG + chr1_4:7741636-7741655 None:intergenic 35.0%
!! TCTAACCTTTGGAATAAGAC+AGG + chr1_4:7741637-7741656 None:intergenic 35.0%
TCTGTGCTACATCTTATCTT+AGG - chr1_4:7741664-7741683 Msa0147680:intron 35.0%
GATGGCTATGTCAAGAAATT+GGG - chr1_4:7742499-7742518 Msa0147680:intron 35.0%
ATGGCTATGTCAAGAAATTG+GGG - chr1_4:7742500-7742519 Msa0147680:intron 35.0%
! GCTCATGCAACTTTTTATGG+GGG - chr1_4:7741034-7741053 Msa0147680:CDS 40.0%
GTTGAAAAGTGGTGTGACAA+GGG + chr1_4:7741088-7741107 None:intergenic 40.0%
TGTTGAAAAGTGGTGTGACA+AGG + chr1_4:7741089-7741108 None:intergenic 40.0%
TTGAATATGTGTGATGCAGG+AGG - chr1_4:7741310-7741329 Msa0147680:intron 40.0%
ATTATAAGACAGACCCCAGA+TGG - chr1_4:7741449-7741468 Msa0147680:intron 40.0%
! TTCCTTTTATGCACCATCTG+GGG + chr1_4:7741465-7741484 None:intergenic 40.0%
! CTTCCTTTTATGCACCATCT+GGG + chr1_4:7741466-7741485 None:intergenic 40.0%
! TCTTCCTTTTATGCACCATC+TGG + chr1_4:7741467-7741486 None:intergenic 40.0%
! ATTCCAATCTTTTCCCAAGC+AGG + chr1_4:7741595-7741614 None:intergenic 40.0%
AAGATTGGAATCTACAGAGG+AGG - chr1_4:7741604-7741623 Msa0147680:intron 40.0%
AGATTGGAATCTACAGAGGA+GGG - chr1_4:7741605-7741624 Msa0147680:intron 40.0%
GGTTAATTGTTATGAGTGGG+TGG + chr1_4:7741919-7741938 None:intergenic 40.0%
TTAGGTTCAGTGTGAATGGA+AGG - chr1_4:7742390-7742409 Msa0147680:intron 40.0%
TAGGTTCAGTGTGAATGGAA+GGG - chr1_4:7742391-7742410 Msa0147680:intron 40.0%
!! GTTAGTGTTGATCAGCAATC+TGG - chr1_4:7742424-7742443 Msa0147680:intron 40.0%
AGGTTCCAAAACTGATTGGA+TGG - chr1_4:7742481-7742500 Msa0147680:intron 40.0%
! CATAGCCATCCAATCAGTTT+TGG + chr1_4:7742489-7742508 None:intergenic 40.0%
GGATGGCTATGTCAAGAAAT+TGG - chr1_4:7742498-7742517 Msa0147680:intron 40.0%
CAAGAAATTGGGGTGCAAAT+TGG - chr1_4:7742510-7742529 Msa0147680:intron 40.0%
TGGTCAATCTATGTCCTTCA+AGG - chr1_4:7742553-7742572 Msa0147680:CDS 40.0%
ATCAGTAGTTGTGACCTTGA+AGG + chr1_4:7742570-7742589 None:intergenic 40.0%
TTCAAGGTCACAACTACTGA+TGG - chr1_4:7742569-7742588 Msa0147680:CDS 40.0%
GTTCCTTCCAATTGGGAATT+TGG - chr1_4:7742617-7742636 Msa0147680:CDS 40.0%
! AGATTGGCCAAATTCCCAAT+TGG + chr1_4:7742627-7742646 None:intergenic 40.0%
GGATCTTGCTAGAGAAAGAT+TGG + chr1_4:7742643-7742662 None:intergenic 40.0%
! GCTCATGCAACTTTTTATGG+GGG - chr1_4:7741034-7741053 Msa0147680:CDS 40.0%
GTTGAAAAGTGGTGTGACAA+GGG + chr1_4:7741088-7741107 None:intergenic 40.0%
TGTTGAAAAGTGGTGTGACA+AGG + chr1_4:7741089-7741108 None:intergenic 40.0%
TTGAATATGTGTGATGCAGG+AGG - chr1_4:7741310-7741329 Msa0147680:intron 40.0%
ATTATAAGACAGACCCCAGA+TGG - chr1_4:7741449-7741468 Msa0147680:intron 40.0%
! TTCCTTTTATGCACCATCTG+GGG + chr1_4:7741465-7741484 None:intergenic 40.0%
! CTTCCTTTTATGCACCATCT+GGG + chr1_4:7741466-7741485 None:intergenic 40.0%
! TCTTCCTTTTATGCACCATC+TGG + chr1_4:7741467-7741486 None:intergenic 40.0%
! ATTCCAATCTTTTCCCAAGC+AGG + chr1_4:7741595-7741614 None:intergenic 40.0%
AAGATTGGAATCTACAGAGG+AGG - chr1_4:7741604-7741623 Msa0147680:intron 40.0%
AGATTGGAATCTACAGAGGA+GGG - chr1_4:7741605-7741624 Msa0147680:intron 40.0%
GGTTAATTGTTATGAGTGGG+TGG + chr1_4:7741919-7741938 None:intergenic 40.0%
TTAGGTTCAGTGTGAATGGA+AGG - chr1_4:7742390-7742409 Msa0147680:intron 40.0%
TAGGTTCAGTGTGAATGGAA+GGG - chr1_4:7742391-7742410 Msa0147680:intron 40.0%
!! GTTAGTGTTGATCAGCAATC+TGG - chr1_4:7742424-7742443 Msa0147680:intron 40.0%
AGGTTCCAAAACTGATTGGA+TGG - chr1_4:7742481-7742500 Msa0147680:intron 40.0%
! CATAGCCATCCAATCAGTTT+TGG + chr1_4:7742489-7742508 None:intergenic 40.0%
GGATGGCTATGTCAAGAAAT+TGG - chr1_4:7742498-7742517 Msa0147680:intron 40.0%
CAAGAAATTGGGGTGCAAAT+TGG - chr1_4:7742510-7742529 Msa0147680:intron 40.0%
TGGTCAATCTATGTCCTTCA+AGG - chr1_4:7742553-7742572 Msa0147680:CDS 40.0%
ATCAGTAGTTGTGACCTTGA+AGG + chr1_4:7742570-7742589 None:intergenic 40.0%
TTCAAGGTCACAACTACTGA+TGG - chr1_4:7742569-7742588 Msa0147680:CDS 40.0%
GTTCCTTCCAATTGGGAATT+TGG - chr1_4:7742617-7742636 Msa0147680:CDS 40.0%
! AGATTGGCCAAATTCCCAAT+TGG + chr1_4:7742627-7742646 None:intergenic 40.0%
GGATCTTGCTAGAGAAAGAT+TGG + chr1_4:7742643-7742662 None:intergenic 40.0%
TCCTATGCCTTCAAAGCTTC+TGG - chr1_4:7741001-7741020 Msa0147680:CDS 45.0%
!! TCCAGAAGCTTTGAAGGCAT+AGG + chr1_4:7741005-7741024 None:intergenic 45.0%
ATGCCTTCAAAGCTTCTGGA+TGG - chr1_4:7741005-7741024 Msa0147680:CDS 45.0%
!! TAGTGATGCAGAAGGCACTA+TGG - chr1_4:7741057-7741076 Msa0147680:CDS 45.0%
!! AGTGATGCAGAAGGCACTAT+GGG - chr1_4:7741058-7741077 Msa0147680:CDS 45.0%
! GATCTTCCAAACGATGATGG+AGG - chr1_4:7741529-7741548 Msa0147680:intron 45.0%
!! TTCCAAACGATGATGGAGGT+TGG - chr1_4:7741533-7741552 Msa0147680:intron 45.0%
TTGATATGGCACAACCTGCT+TGG - chr1_4:7741578-7741597 Msa0147680:intron 45.0%
TGATATGGCACAACCTGCTT+GGG - chr1_4:7741579-7741598 Msa0147680:intron 45.0%
CAACCTGCTTGGGAAAAGAT+TGG - chr1_4:7741589-7741608 Msa0147680:intron 45.0%
! TCGTCCCTGTCTTATTCCAA+AGG - chr1_4:7741629-7741648 Msa0147680:intron 45.0%
AGGGTTCCTTGCAAAAAGCA+TGG - chr1_4:7742362-7742381 Msa0147680:intron 45.0%
! GTTCCTTGCAAAAAGCATGG+AGG - chr1_4:7742365-7742384 Msa0147680:intron 45.0%
!! ACTCCTCCATGCTTTTTGCA+AGG + chr1_4:7742371-7742390 None:intergenic 45.0%
! GCAAAAAGCATGGAGGAGTT+AGG - chr1_4:7742372-7742391 Msa0147680:intron 45.0%
GGAGTTAGGTTCAGTGTGAA+TGG - chr1_4:7742386-7742405 Msa0147680:intron 45.0%
TGGCCAAATTCCCAATTGGA+AGG + chr1_4:7742623-7742642 None:intergenic 45.0%
TCCTATGCCTTCAAAGCTTC+TGG - chr1_4:7741001-7741020 Msa0147680:CDS 45.0%
!! TCCAGAAGCTTTGAAGGCAT+AGG + chr1_4:7741005-7741024 None:intergenic 45.0%
ATGCCTTCAAAGCTTCTGGA+TGG - chr1_4:7741005-7741024 Msa0147680:CDS 45.0%
!! TAGTGATGCAGAAGGCACTA+TGG - chr1_4:7741057-7741076 Msa0147680:CDS 45.0%
!! AGTGATGCAGAAGGCACTAT+GGG - chr1_4:7741058-7741077 Msa0147680:CDS 45.0%
! GATCTTCCAAACGATGATGG+AGG - chr1_4:7741529-7741548 Msa0147680:intron 45.0%
!! TTCCAAACGATGATGGAGGT+TGG - chr1_4:7741533-7741552 Msa0147680:intron 45.0%
TTGATATGGCACAACCTGCT+TGG - chr1_4:7741578-7741597 Msa0147680:intron 45.0%
TGATATGGCACAACCTGCTT+GGG - chr1_4:7741579-7741598 Msa0147680:intron 45.0%
CAACCTGCTTGGGAAAAGAT+TGG - chr1_4:7741589-7741608 Msa0147680:intron 45.0%
! TCGTCCCTGTCTTATTCCAA+AGG - chr1_4:7741629-7741648 Msa0147680:intron 45.0%
AGGGTTCCTTGCAAAAAGCA+TGG - chr1_4:7742362-7742381 Msa0147680:intron 45.0%
! GTTCCTTGCAAAAAGCATGG+AGG - chr1_4:7742365-7742384 Msa0147680:intron 45.0%
!! ACTCCTCCATGCTTTTTGCA+AGG + chr1_4:7742371-7742390 None:intergenic 45.0%
! GCAAAAAGCATGGAGGAGTT+AGG - chr1_4:7742372-7742391 Msa0147680:intron 45.0%
GGAGTTAGGTTCAGTGTGAA+TGG - chr1_4:7742386-7742405 Msa0147680:intron 45.0%
TGGCCAAATTCCCAATTGGA+AGG + chr1_4:7742623-7742642 None:intergenic 45.0%
! GGTCCATCCAGAAGCTTTGA+AGG + chr1_4:7741011-7741030 None:intergenic 50.0%
TATGGGGGTAGTGATGCAGA+AGG - chr1_4:7741049-7741068 Msa0147680:CDS 50.0%
GACCCCAGATGGTGCATAAA+AGG - chr1_4:7741460-7741479 Msa0147680:intron 50.0%
CACCAACCTCCATCATCGTT+TGG + chr1_4:7741538-7741557 None:intergenic 50.0%
! GTGTTGATCAGCAATCTGGC+TGG - chr1_4:7742428-7742447 Msa0147680:intron 50.0%
! GGTCCATCCAGAAGCTTTGA+AGG + chr1_4:7741011-7741030 None:intergenic 50.0%
TATGGGGGTAGTGATGCAGA+AGG - chr1_4:7741049-7741068 Msa0147680:CDS 50.0%
GACCCCAGATGGTGCATAAA+AGG - chr1_4:7741460-7741479 Msa0147680:intron 50.0%
CACCAACCTCCATCATCGTT+TGG + chr1_4:7741538-7741557 None:intergenic 50.0%
! GTGTTGATCAGCAATCTGGC+TGG - chr1_4:7742428-7742447 Msa0147680:intron 50.0%
TGTGATGCAGGAGGAGCTTG+TGG - chr1_4:7741319-7741338 Msa0147680:intron 55.0%
GCAGGAGGAGCTTGTGGTTA+TGG - chr1_4:7741325-7741344 Msa0147680:intron 55.0%
ATCAGCAATCTGGCTGGTGC+TGG - chr1_4:7742434-7742453 Msa0147680:intron 55.0%
TGTGATGCAGGAGGAGCTTG+TGG - chr1_4:7741319-7741338 Msa0147680:intron 55.0%
GCAGGAGGAGCTTGTGGTTA+TGG - chr1_4:7741325-7741344 Msa0147680:intron 55.0%
ATCAGCAATCTGGCTGGTGC+TGG - chr1_4:7742434-7742453 Msa0147680:intron 55.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 7740941 7742670 7740941 ID=Msa0147680;Name=Msa0147680
chr1_4 mRNA 7740941 7742670 7740941 ID=Msa0147680-mRNA-1;Parent=Msa0147680;Name=Msa0147680-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0|1|1|1|3|0|255
chr1_4 exon 7742532 7742670 7742532 ID=Msa0147680-mRNA-1:exon:3338;Parent=Msa0147680-mRNA-1
chr1_4 exon 7741961 7742282 7741961 ID=Msa0147680-mRNA-1:exon:3337;Parent=Msa0147680-mRNA-1
chr1_4 exon 7740941 7741247 7740941 ID=Msa0147680-mRNA-1:exon:3336;Parent=Msa0147680-mRNA-1
chr1_4 CDS 7742532 7742670 7742532 ID=Msa0147680-mRNA-1:cds;Parent=Msa0147680-mRNA-1
chr1_4 CDS 7741961 7742282 7741961 ID=Msa0147680-mRNA-1:cds;Parent=Msa0147680-mRNA-1
chr1_4 CDS 7740941 7741247 7740941 ID=Msa0147680-mRNA-1:cds;Parent=Msa0147680-mRNA-1
Gene Sequence

>Msa0147680

ATGACCAAAGTTATGTTTATTTTGGGCACACTCATTGGATTATGTTGTTTCACAATAAATTCCTATGCCTTCAAAGCTTCTGGATGGACCAATGCTCATGCAACTTTTTATGGGGGTAGTGATGCAGAAGGCACTATGGGAGGAGCTTGTGGTTATGGAAATCTATATTCAACGGGGTATGGGACAAGAACAGCTGCATTAAGTACTGCTTTGTTTAATGATGGAGCTTCATGTGGGCAATGCTACAAAATCATTTGTGATTATAAGACAGACCCCAGATGGTGCATAAAAGGAAGATCTATTACCATAACAGCCACAAATTTCTGTCCTCCTAATTTTGATCTTCCAAACGATGATGGAGGTTGGTGCAACCCACCTCTAAAGCATTTTGATATGGCACAACCTGCTTGGGAAAAGATTGGAATCTACAGAGGAGGGATCGTCCCTGTCTTATTCCAAAGGGTTCCTTGCAAAAAGCATGGAGGAGTTAGGTTCAGTGTGAATGGAAGGGACTACTTTGAGTTAGTGTTGATCAGCAATCTGGCTGGTGCTGGTTCAATCCAATCTGTTTCCATTAAAGGTTCCAAAACTGATTGGATGGCTATGTCAAGAAATTGGGGTGCAAATTGGCAATCTAATGCTTATTTGAATGGTCAATCTATGTCCTTCAAGGTCACAACTACTGATGGAGTAACCAGAACTTTCCAAAACATTGTTCCTTCCAATTGGGAATTTGGCCAATCTTTCTCTAGCAAGATCCAGTTCTAA

Protein sequence

>Msa0147680

MTKVMFILGTLIGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQNIVPSNWEFGQSFSSKIQF*