AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252030 MtrunA17_Chr8g0388971 71.642 67 19 0 82 148 167 233 1.18e-23 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 185 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATTTACAGGTTGTATT+TGG 0.074952 8_2:-48778500 Msa1252030:intron
ACCCTGTGACAGTATAAATT+TGG 0.118549 8_2:-48781905 Msa1252030:five_prime_UTR
TGATCTGATATTGCCATTAT+TGG 0.160604 8_2:-48779597 Msa1252030:CDS
TCGATAAAGCGGACTATATT+TGG 0.163042 8_2:+48783061 None:intergenic
TTTATTAAGTTACTACTAAT+TGG 0.213202 8_2:+48781529 None:intergenic
GACTACATGCGTCTGTTTAT+TGG 0.216412 8_2:-48778405 Msa1252030:CDS
TACTTTAGGTTACATTTATC+AGG 0.226384 8_2:-48780950 Msa1252030:CDS
TCTCATCTTCGAAGAGATTA+TGG 0.229137 8_2:-48780980 Msa1252030:CDS
AAAATTTAGCAAGGGAAAAT+TGG 0.244490 8_2:-48781676 Msa1252030:five_prime_UTR
TAGTTTATAGCTGACCTTAA+TGG 0.271013 8_2:-48782737 Msa1252030:five_prime_UTR
CCCTGTGACAGTATAAATTT+GGG 0.275122 8_2:-48781904 Msa1252030:five_prime_UTR
ACTATCATGGTTCCTTGATT+TGG 0.280086 8_2:+48782756 None:intergenic
CAAGGTAGATACTGGACTTC+TGG 0.286240 8_2:-48781802 Msa1252030:five_prime_UTR
TCTCATCTCAATATGAATTA+TGG 0.289956 8_2:-48781277 Msa1252030:five_prime_UTR
TGACATTACATCTGGTAAAT+AGG 0.300966 8_2:+48779544 None:intergenic
GGGAGAGAAAGCTGAGAAAT+AGG 0.302207 8_2:+48784553 None:intergenic
GGGAGAGAAAGCTGAGAAAT+AGG 0.302207 8_2:+48785825 None:intergenic
GTCTAATTCGACCGCAATTT+AGG 0.304086 8_2:+48782501 None:intergenic
TACAGGTTGTATTTGGGAAA+TGG 0.310094 8_2:-48778493 Msa1252030:intron
CATATTAAATGTGTATTCAT+TGG 0.315502 8_2:-48781733 Msa1252030:five_prime_UTR
ATAGTAGTATATTTCAAATA+TGG 0.315953 8_2:+48782895 None:intergenic
TATAACTTCCCTATAGAATC+AGG 0.340483 8_2:+48782322 None:intergenic
AATTGGCCAATATTGTTTCA+TGG 0.344719 8_2:+48782600 None:intergenic
GGATCAGCTAAATTCTTTAC+TGG 0.347931 8_2:-48781882 Msa1252030:five_prime_UTR
ACAGGTTGTATTTGGGAAAT+GGG 0.352688 8_2:-48778492 Msa1252030:intron
CAAGCTACAGGTGTGGCTTC+AGG 0.358651 8_2:-48780232 Msa1252030:CDS
GATTGGCTCCCTGATTCTAT+AGG 0.360597 8_2:-48782331 Msa1252030:five_prime_UTR
CAACACCTCCTGTAGGTTCT+TGG 0.361948 8_2:+48783209 None:intergenic
AATGGTAACGTCTCCAATAA+TGG 0.365364 8_2:+48779584 None:intergenic
GTAGATTACAAGGTAGATAC+TGG 0.366539 8_2:-48781810 Msa1252030:five_prime_UTR
ATAAATAGCCTTGGCGCAAT+TGG 0.368003 8_2:-48781511 Msa1252030:five_prime_UTR
GTAATCTCCCATTTGTTCAT+TGG 0.369961 8_2:+48782656 None:intergenic
TATGCAGGATAGAGATATCT+AGG 0.370215 8_2:-48782019 Msa1252030:five_prime_UTR
TTAATTTACAGGTTGTATTT+GGG 0.371554 8_2:-48778499 Msa1252030:intron
TTGTTTCATGGTTCTACGTT+TGG 0.372084 8_2:+48782612 None:intergenic
CGGGAAGGGGTCCCACCATT+TGG 0.376612 8_2:+48781398 None:intergenic
TTACACAAGAGGCTGTTTCC+AGG 0.378319 8_2:+48781447 None:intergenic
TGTGTCTCGGAAGTTGGAAT+TGG 0.379027 8_2:-48778031 Msa1252030:CDS
CAAATGGTGGGACCCCTTCC+CGG 0.385108 8_2:-48781397 Msa1252030:five_prime_UTR
GTAGAACCATGAAACAATAT+TGG 0.398741 8_2:-48782606 Msa1252030:five_prime_UTR
GAGTCTCTCAATCTTATAAC+TGG 0.399842 8_2:+48784585 None:intergenic
GAGTCTCTCAATCTTATAAC+TGG 0.399842 8_2:+48785857 None:intergenic
ATAAATTGTTGCAGTGGAAC+GGG 0.401057 8_2:-48783095 Msa1252030:intron
ATGCATGTATGTGTCTCATT+AGG 0.403938 8_2:-48781066 Msa1252030:CDS
AAGCTTAACCTTGTCACAAA+TGG 0.405031 8_2:+48780410 None:intergenic
CAGGTGTAAATCAGTCTCTC+TGG 0.406336 8_2:+48781561 None:intergenic
AATTCTTTACTGGAAGTTGC+TGG 0.407605 8_2:-48781872 Msa1252030:five_prime_UTR
TACAGCTAACTACACCATTA+AGG 0.410735 8_2:+48782723 None:intergenic
ATTTGTTATTTGTGATATCA+AGG 0.411277 8_2:-48782142 Msa1252030:five_prime_UTR
TGGAAATGATATAAGTTAGT+TGG 0.412544 8_2:-48781782 Msa1252030:five_prime_UTR
AAACAATGCATAAAGTATCT+TGG 0.412573 8_2:-48778427 Msa1252030:CDS
GGTTACATTTATCAGGGAAA+TGG 0.414501 8_2:-48780943 Msa1252030:CDS
GAAATATTATACTAAGAATC+AGG 0.415307 8_2:+48782296 None:intergenic
AAAAGAAACAATGAAAATAA+TGG 0.415655 8_2:+48782786 None:intergenic
TATGCAATTGGCTATGTCTA+TGG 0.420267 8_2:-48779040 Msa1252030:CDS
TTTGAGTACCAATGAACAAA+TGG 0.423392 8_2:-48782664 Msa1252030:five_prime_UTR
AAATTGGGCCCATGACATAT+TGG 0.423673 8_2:-48782190 Msa1252030:five_prime_UTR
AATGGAAGGGCATGTTGTGC+TGG 0.427310 8_2:-48780925 Msa1252030:CDS
ATGCGTCTGTTTATTGGACT+TGG 0.428369 8_2:-48778399 Msa1252030:intron
GTACATTCTATGTTAAGAAA+AGG 0.430285 8_2:-48781121 Msa1252030:five_prime_UTR
ATTGGCTCCCTGATTCTATA+GGG 0.431988 8_2:-48782330 Msa1252030:five_prime_UTR
TATTTATTAAGTTACTACTA+AGG 0.432797 8_2:+48781337 None:intergenic
TTCCCGGACCTTGCGTATGC+GGG 0.436818 8_2:-48781381 Msa1252030:five_prime_UTR
AACTCGTGATCTCAAGCTCC+AGG 0.437646 8_2:-48782374 Msa1252030:five_prime_UTR
AGTTGATGAACCAAGTTGAT+TGG 0.440189 8_2:-48782348 Msa1252030:five_prime_UTR
TACAGGTGTGGCTTCAGGTC+TGG 0.442197 8_2:-48780227 Msa1252030:intron
GGTTTATGTGTCTCGGAAGT+TGG 0.448136 8_2:-48778037 Msa1252030:CDS
TAGCCAATTGCATATCCCTT+TGG 0.448259 8_2:+48779049 None:intergenic
CCCCAAATTTATACTGTCAC+AGG 0.449061 8_2:+48781903 None:intergenic
CTTGGTTCATCAACTTGCCC+TGG 0.450773 8_2:+48782356 None:intergenic
GGCCCATGACATATTGGTTG+CGG 0.451368 8_2:-48782184 Msa1252030:five_prime_UTR
AAGGTCATGGGTTCAAGTCC+TGG 0.458245 8_2:-48781465 Msa1252030:five_prime_UTR
TAAACTTGCTAGCATAATTG+AGG 0.458592 8_2:-48782413 Msa1252030:five_prime_UTR
ATTGAGGTTTCTGCAAAGAA+AGG 0.460952 8_2:-48782397 Msa1252030:five_prime_UTR
GGATTTGAAAATGTGCACTT+TGG 0.467162 8_2:+48781017 None:intergenic
CTCCCGTTGCTATATTGCCC+AGG 0.467870 8_2:-48784535 Msa1252030:five_prime_UTR
CTCCCGTTGCTATATTGCCC+AGG 0.467870 8_2:-48785807 Msa1252030:five_prime_UTR
TACATTCTATGTTAAGAAAA+GGG 0.468435 8_2:-48781120 Msa1252030:five_prime_UTR
GCCAAGTGATTACCTTCGTC+AGG 0.468536 8_2:+48779988 None:intergenic
AATAATGGCAATATCAGATC+AGG 0.468774 8_2:+48779599 None:intergenic
AAGATGTTGCAGCAGTTGCC+TGG 0.470189 8_2:-48780144 Msa1252030:intron
TCCTGTGACTGGAAGGTCAT+GGG 0.473122 8_2:-48781477 Msa1252030:five_prime_UTR
GCTCCCGCATACGCAAGGTC+CGG 0.478552 8_2:+48781378 None:intergenic
GATAAATTGTTGCAGTGGAA+CGG 0.481209 8_2:-48783096 Msa1252030:intron
CTGGCTATATATAGTGTAAG+AGG 0.481760 8_2:+48784604 None:intergenic
CTGGCTATATATAGTGTAAG+AGG 0.481760 8_2:+48785876 None:intergenic
ATGCGGGAGCTTTAGTGCAC+CGG 0.481830 8_2:-48781365 Msa1252030:five_prime_UTR
AACCTGGGCAATATAGCAAC+GGG 0.484029 8_2:+48784533 None:intergenic
AACCTGGGCAATATAGCAAC+GGG 0.484029 8_2:+48785805 None:intergenic
ATACCAAAGGGATATGCAAT+TGG 0.484511 8_2:-48779052 Msa1252030:CDS
TAGTAACTTAATAAATATTG+AGG 0.485215 8_2:-48781331 Msa1252030:five_prime_UTR
CTCCCGCATACGCAAGGTCC+GGG 0.487546 8_2:+48781379 None:intergenic
TTATATTATTGTTCATGTCA+TGG 0.490205 8_2:-48782254 Msa1252030:five_prime_UTR
AACTGAACCGGAGAGAAACC+TGG 0.490854 8_2:+48784517 None:intergenic
AACTGAACCGGAGAGAAACC+TGG 0.490854 8_2:+48785789 None:intergenic
GTGTCTCGGAAGTTGGAATT+GGG 0.492442 8_2:-48778030 Msa1252030:CDS
ATCATAATTGCTAGCACTCA+AGG 0.498182 8_2:+48782230 None:intergenic
ATTATTGGAGACGTTACCAT+TGG 0.499787 8_2:-48779582 Msa1252030:CDS
GCTGTCATGCTCATCTGCAC+CGG 0.502038 8_2:-48778081 Msa1252030:CDS
CTTTGATAATGTTGCGCTGA+TGG 0.506204 8_2:-48782479 Msa1252030:five_prime_UTR
TTATACTCATTGACTTGCAA+AGG 0.508723 8_2:-48778611 Msa1252030:intron
ATTTATTAAGTTACTACTAA+GGG 0.508830 8_2:+48781338 None:intergenic
CTGAAGCCACACCTGTAGCT+TGG 0.509069 8_2:+48780233 None:intergenic
ATAAGAACTCATTTAGAAGA+AGG 0.516646 8_2:+48782856 None:intergenic
AGCAACATTGGACCTGCTGC+AGG 0.516938 8_2:-48780114 Msa1252030:intron
AGTAACTTAATAAATATTGA+GGG 0.518302 8_2:-48781330 Msa1252030:five_prime_UTR
TAAAGTTGTTGTCCTGTGAC+TGG 0.518871 8_2:-48781488 Msa1252030:five_prime_UTR
CTTCCCGGACCTTGCGTATG+CGG 0.522009 8_2:-48781382 Msa1252030:five_prime_UTR
TAACCTTGTCACAAATGGAT+TGG 0.525917 8_2:+48780415 None:intergenic
CATACGCAAGGTCCGGGAAG+GGG 0.526083 8_2:+48781385 None:intergenic
TATGAACTTTGTAGATTACA+AGG 0.528266 8_2:-48781820 Msa1252030:five_prime_UTR
CGCATACGCAAGGTCCGGGA+AGG 0.528852 8_2:+48781383 None:intergenic
TATCTAAACTTTCAGATGGA+AGG 0.536440 8_2:-48781199 Msa1252030:five_prime_UTR
CCTGGACTATTGAGCAACAT+TGG 0.538148 8_2:-48780126 Msa1252030:CDS
TTAGGATGGTTTATGTGTCT+CGG 0.538766 8_2:-48778044 Msa1252030:CDS
ACCCATGACCTTCCAGTCAC+AGG 0.539590 8_2:+48781476 None:intergenic
AATTTAAATTACAAAACGAT+CGG 0.543316 8_2:-48782581 Msa1252030:five_prime_UTR
GTCCTGTGACTGGAAGGTCA+TGG 0.543429 8_2:-48781478 Msa1252030:five_prime_UTR
AGGTCAGCTATAAACTATCA+TGG 0.544847 8_2:+48782743 None:intergenic
GAAGCTAGACGCTGCTCCAA+TGG 0.546492 8_2:+48779566 None:intergenic
ATATTGCCCAGGTTTCTCTC+CGG 0.550024 8_2:-48784524 Msa1252030:five_prime_UTR
ATATTGCCCAGGTTTCTCTC+CGG 0.550024 8_2:-48785796 Msa1252030:five_prime_UTR
ACATTGCAATGTAAATATGC+AGG 0.551089 8_2:-48782034 Msa1252030:five_prime_UTR
GTCACTCTGAAACTGAACTT+AGG 0.551593 8_2:-48782096 Msa1252030:five_prime_UTR
TTGAGTACCAATGAACAAAT+GGG 0.552900 8_2:-48782663 Msa1252030:five_prime_UTR
ACTTTAGGTTACATTTATCA+GGG 0.553302 8_2:-48780949 Msa1252030:CDS
AATCAGGGAGCCAATCAACT+TGG 0.557235 8_2:+48782338 None:intergenic
AGGTGTAAATCAGTCTCTCT+GGG 0.557650 8_2:+48781562 None:intergenic
ATGCAGGATAGAGATATCTA+GGG 0.558549 8_2:-48782018 Msa1252030:five_prime_UTR
AAGCCGCAACCAATATGTCA+TGG 0.559461 8_2:+48782181 None:intergenic
TGAAAACTTACTCGATAAAG+CGG 0.560296 8_2:+48783050 None:intergenic
TGGAATAACATGAGCATCTG+AGG 0.560406 8_2:+48782915 None:intergenic
CAGACAACAATCCAAGCTAC+AGG 0.561704 8_2:-48780244 Msa1252030:CDS
TGTAACTTATTACCTGCAGC+AGG 0.562977 8_2:+48780102 None:intergenic
TTTGATAATGTTGCGCTGAT+GGG 0.563286 8_2:-48782478 Msa1252030:five_prime_UTR
ATCATCATCGTGTTAATCAA+AGG 0.563532 8_2:-48784484 Msa1252030:intron
ATCATCATCGTGTTAATCAA+AGG 0.563532 8_2:-48785756 Msa1252030:intron
AGTAACTTAATAAATAGCCT+TGG 0.563892 8_2:-48781520 Msa1252030:five_prime_UTR
AGGCTGCGTACAATACCAAA+TGG 0.563960 8_2:-48781413 Msa1252030:five_prime_UTR
TGCGGGAGCTTTAGTGCACC+GGG 0.564240 8_2:-48781364 Msa1252030:five_prime_UTR
TCTCTATCTAAACTTTCAGA+TGG 0.564680 8_2:-48781203 Msa1252030:five_prime_UTR
TTTGATATCGTTGAGAATTG+CGG 0.572905 8_2:-48782545 Msa1252030:five_prime_UTR
CCAATGTTGCTCAATAGTCC+AGG 0.573926 8_2:+48780126 None:intergenic
TTTCACCAACTGTTGTGTAT+CGG 0.574904 8_2:+48777999 None:intergenic
GCATACGCAAGGTCCGGGAA+GGG 0.579994 8_2:+48781384 None:intergenic
GCATTTCACCAAGAACCTAC+AGG 0.580496 8_2:-48783217 Msa1252030:five_prime_UTR
TGCGTACAATACCAAATGGT+GGG 0.585268 8_2:-48781409 Msa1252030:five_prime_UTR
ACATTTATCAGGGAAATGGA+AGG 0.587193 8_2:-48780939 Msa1252030:CDS
AGCCGCAACCAATATGTCAT+GGG 0.590721 8_2:+48782182 None:intergenic
ATGATGATGACAAACTGAAC+CGG 0.593153 8_2:+48784505 None:intergenic
ATGATGATGACAAACTGAAC+CGG 0.593153 8_2:+48785777 None:intergenic
CATTTATCAGGGAAATGGAA+GGG 0.594293 8_2:-48780938 Msa1252030:CDS
GATGAGAAGACATGTTGCAA+AGG 0.598568 8_2:+48780996 None:intergenic
ATAACTTCCCTATAGAATCA+GGG 0.600431 8_2:+48782323 None:intergenic
GGGGTATCAACACCTCCTGT+AGG 0.607725 8_2:+48783202 None:intergenic
CCCAAATTTATACTGTCACA+GGG 0.608347 8_2:+48781904 None:intergenic
GAGAATTGCGGTCTCTAATG+TGG 0.611232 8_2:-48782533 Msa1252030:five_prime_UTR
CTAAAGCTCCCGCATACGCA+AGG 0.614068 8_2:+48781373 None:intergenic
CAACTTTACCAATTGCGCCA+AGG 0.614642 8_2:+48781503 None:intergenic
AAACCTGGGCAATATAGCAA+CGG 0.615257 8_2:+48784532 None:intergenic
AAACCTGGGCAATATAGCAA+CGG 0.615257 8_2:+48785804 None:intergenic
TTTAGAAGCACATACCATTG+GGG 0.624275 8_2:+48783182 None:intergenic
GTTGCTAATGACGCAAGAGG+AGG 0.628706 8_2:-48780886 Msa1252030:intron
AGTTACTACTAAGGGCAACC+CGG 0.629947 8_2:+48781346 None:intergenic
CTGCGTACAATACCAAATGG+TGG 0.630144 8_2:-48781410 Msa1252030:five_prime_UTR
ACTCGTGATCTCAAGCTCCA+GGG 0.632486 8_2:-48782373 Msa1252030:five_prime_UTR
GTTGTTGTCCTGTGACTGGA+AGG 0.637635 8_2:-48781484 Msa1252030:five_prime_UTR
GCAATTGGCTATGTCTATGG+TGG 0.641388 8_2:-48779037 Msa1252030:CDS
ACTGAACCGGAGAGAAACCT+GGG 0.646721 8_2:+48784518 None:intergenic
ACTGAACCGGAGAGAAACCT+GGG 0.646721 8_2:+48785790 None:intergenic
ACACCAATCCATTTGTGACA+AGG 0.647586 8_2:-48780418 Msa1252030:intron
GCTGTTGCTAATGACGCAAG+AGG 0.648895 8_2:-48780889 Msa1252030:CDS
AACAATCCAAGCTACAGGTG+TGG 0.660249 8_2:-48780239 Msa1252030:CDS
AGCATTCTTGATCCTGACGA+AGG 0.660593 8_2:-48780000 Msa1252030:intron
TTAGAAGCACATACCATTGG+GGG 0.661818 8_2:+48783183 None:intergenic
GTTGTCCGATACACAACAGT+TGG 0.664066 8_2:-48778004 Msa1252030:CDS
GGAAGGGCATGTTGTGCTGG+TGG 0.676502 8_2:-48780922 Msa1252030:CDS
CCTGTGACAGTATAAATTTG+GGG 0.677249 8_2:-48781903 Msa1252030:five_prime_UTR
TGGCTATGTCTATGGTGGAG+TGG 0.680376 8_2:-48779032 Msa1252030:intron
ATAAATGCAATTAAACTACA+CGG 0.689697 8_2:-48782687 Msa1252030:five_prime_UTR
TGCAGGATAGAGATATCTAG+GGG 0.705800 8_2:-48782017 Msa1252030:five_prime_UTR
GAAACACTTCTGTGCAATCG+CGG 0.714403 8_2:-48777980 Msa1252030:CDS
GGTTGATGCTGCCTAAATTG+CGG 0.734141 8_2:-48782512 Msa1252030:five_prime_UTR
TTTCACCAAGAACCTACAGG+AGG 0.744614 8_2:-48783214 Msa1252030:five_prime_UTR
GTATGTATCAGAAAACAGTG+TGG 0.872261 8_2:-48779096 Msa1252030:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAATTAAATAATGA+AGG + chr8_2:48780476-48780495 None:intergenic 10.0%
!! TTATAAAAAATATTAGCAAA+AGG - chr8_2:48784120-48784139 Msa1252030:intron 10.0%
!! AAAAAAAAAATATTAGCAAA+AGG - chr8_2:48784180-48784199 Msa1252030:intron 10.0%
!!! TTGGAATATTTTATATTATA+TGG - chr8_2:48784698-48784717 Msa1252030:intron 10.0%
!! TTTCTTATGATATTTATGTT+CGG - chr8_2:48778465-48778484 Msa1252030:CDS 15.0%
!! TTATGTTTGGAAAATTTATT+TGG - chr8_2:48778635-48778654 Msa1252030:CDS 15.0%
!!! ATTTTCTATGTTTTTAGTTT+TGG - chr8_2:48778770-48778789 Msa1252030:intron 15.0%
!!! TTTTCTATGTTTTTAGTTTT+GGG - chr8_2:48778771-48778790 Msa1252030:intron 15.0%
!!! ATATTGATTTTAGATTTCTT+TGG - chr8_2:48779142-48779161 Msa1252030:intron 15.0%
!! CCAAAATAATTAAATAATGA+AGG + chr8_2:48779202-48779221 None:intergenic 15.0%
!!! CCTTCATTATTTAATTATTT+TGG - chr8_2:48779199-48779218 Msa1252030:intron 15.0%
!! ACAAAGAAATTTCATTAATT+AGG + chr8_2:48779231-48779250 None:intergenic 15.0%
!! TTTCTTATGATATTTATGTT+CGG - chr8_2:48778465-48778484 Msa1252030:CDS 15.0%
!!! TATGTTTTGGAAAATTTATT+TGG - chr8_2:48779908-48779927 Msa1252030:intron 15.0%
!!! TTTTCTATGTTTTTAGTTTT+TGG - chr8_2:48778771-48778790 Msa1252030:intron 15.0%
!!! TTTCTATGTTTTTAGTTTTT+GGG - chr8_2:48780045-48780064 Msa1252030:intron 15.0%
!!! ATATTGATTTTAGATTTCTT+TGG - chr8_2:48779142-48779161 Msa1252030:intron 15.0%
!!! AGAAAATATTTTTCTTACAA+TGG - chr8_2:48780625-48780644 Msa1252030:intron 15.0%
!!! ATTTTATAAAGGGATTTTTT+AGG - chr8_2:48780868-48780887 Msa1252030:intron 15.0%
!! ATAGTAGTATATTTCAAATA+TGG + chr8_2:48780976-48780995 None:intergenic 15.0%
!! AAAAGAAACAATGAAAATAA+TGG + chr8_2:48781085-48781104 None:intergenic 15.0%
!! AATTTAAATTACAAAACGAT+CGG - chr8_2:48781287-48781306 Msa1252030:five_prime_UTR 15.0%
!!! AAACATCTTAATATTTTTGT+AGG - chr8_2:48781894-48781913 Msa1252030:five_prime_UTR 15.0%
!! TTTATTAAGTTACTACTAAT+TGG + chr8_2:48782342-48782361 None:intergenic 15.0%
!! ATTTATTAAGTTACTACTAA+GGG + chr8_2:48782343-48782362 None:intergenic 15.0%
!! TATTTATTAAGTTACTACTA+AGG + chr8_2:48782344-48782363 None:intergenic 15.0%
!! TAGTAACTTAATAAATATTG+AGG - chr8_2:48782537-48782556 Msa1252030:five_prime_UTR 15.0%
!! AGTAACTTAATAAATATTGA+GGG - chr8_2:48782538-48782557 Msa1252030:five_prime_UTR 15.0%
!!! TTGTCTTTTTTTTTTCTTTT+AGG - chr8_2:48783010-48783029 Msa1252030:intron 15.0%
!! TTACTACTGAAATAAAATAA+TGG + chr8_2:48784885-48784904 None:intergenic 15.0%
!! AAAAGAAATATGTAAAATTC+AGG + chr8_2:48785287-48785306 None:intergenic 15.0%
!!! TGAATTTTACATATTTCTTT+TGG - chr8_2:48785286-48785305 Msa1252030:intron 15.0%
!! TTCTTATGATATTTATGTTC+GGG - chr8_2:48778466-48778485 Msa1252030:CDS 20.0%
!! AGTCTAATGATATTTATGTT+TGG - chr8_2:48778622-48778641 Msa1252030:CDS 20.0%
!! CAAAAGTTTATTGTTTATAG+TGG + chr8_2:48778966-48778985 None:intergenic 20.0%
!!! CACTATAAACAATAAACTTT+TGG - chr8_2:48778964-48778983 Msa1252030:intron 20.0%
!!! TGTAGTATTGAACATTATAT+CGG - chr8_2:48779070-48779089 Msa1252030:CDS 20.0%
!! TTCTTATGATATTTATGTTC+GGG - chr8_2:48778466-48778485 Msa1252030:CDS 20.0%
!!! GTCTAATGATATTTATGTTT+TGG - chr8_2:48778623-48778642 Msa1252030:CDS 20.0%
!! CAAAAGTTTATTGTTTATAG+TGG + chr8_2:48778966-48778985 None:intergenic 20.0%
!!! CACTATAAACAATAAACTTT+TGG - chr8_2:48778964-48778983 Msa1252030:intron 20.0%
!!! TGTAGTATTGAACATTATAT+CGG - chr8_2:48779070-48779089 Msa1252030:CDS 20.0%
!!! ATGTTGGTAAATTTTACTTT+AGG - chr8_2:48780598-48780617 Msa1252030:intron 20.0%
!!! TGCTCAATGTTATTTTATAA+AGG - chr8_2:48780857-48780876 Msa1252030:intron 20.0%
!!! GCTCAATGTTATTTTATAAA+GGG - chr8_2:48780858-48780877 Msa1252030:intron 20.0%
!! TATGAAGTTTGAATATTCTT+TGG - chr8_2:48780892-48780911 Msa1252030:CDS 20.0%
!! ATAAATGCAATTAAACTACA+CGG - chr8_2:48781181-48781200 Msa1252030:five_prime_UTR 20.0%
!!! GATCGTTTTGTAATTTAAAT+TGG + chr8_2:48781288-48781307 None:intergenic 20.0%
!! GAAATATTATACTAAGAATC+AGG + chr8_2:48781575-48781594 None:intergenic 20.0%
!! TTATATTATTGTTCATGTCA+TGG - chr8_2:48781614-48781633 Msa1252030:five_prime_UTR 20.0%
!!! ATTTGTTATTTGTGATATCA+AGG - chr8_2:48781726-48781745 Msa1252030:five_prime_UTR 20.0%
!! CATATTAAATGTGTATTCAT+TGG - chr8_2:48782135-48782154 Msa1252030:five_prime_UTR 20.0%
!! TAGTTGAAAAAAATTTAGCA+AGG - chr8_2:48782183-48782202 Msa1252030:five_prime_UTR 20.0%
!! AGTTGAAAAAAATTTAGCAA+GGG - chr8_2:48782184-48782203 Msa1252030:five_prime_UTR 20.0%
!!! TGTGTTTTATCTATAAAAGA+GGG + chr8_2:48782246-48782265 None:intergenic 20.0%
!!! ATATTTTAATCTAATAGTGC+GGG + chr8_2:48782281-48782300 None:intergenic 20.0%
!!! CATATTTTAATCTAATAGTG+CGG + chr8_2:48782282-48782301 None:intergenic 20.0%
!!! TTACTACTAATTGGTTTTAA+TGG + chr8_2:48782333-48782352 None:intergenic 20.0%
!! TACATTCTATGTTAAGAAAA+GGG - chr8_2:48782748-48782767 Msa1252030:five_prime_UTR 20.0%
!!! ATTATGGATTTTCTTACTTT+AGG - chr8_2:48782904-48782923 Msa1252030:five_prime_UTR 20.0%
!! TATTAAACGATTCAGTTATT+AGG - chr8_2:48783146-48783165 Msa1252030:intron 20.0%
!! CAACTTAAAATAAAAAGACT+TGG + chr8_2:48783283-48783302 None:intergenic 20.0%
!!! CAAGTCTTTTTATTTTAAGT+TGG - chr8_2:48783281-48783300 Msa1252030:intron 20.0%
!!! AAGGTTAAGCTTTTTATATA+AGG - chr8_2:48783469-48783488 Msa1252030:intron 20.0%
!! TATATCATCAGAAAAGTAAT+AGG + chr8_2:48783839-48783858 None:intergenic 20.0%
!! GATTGAAATTCGAATATAAT+CGG + chr8_2:48783980-48783999 None:intergenic 20.0%
!! TATTATAACTCAAATCACAA+TGG - chr8_2:48784568-48784587 Msa1252030:five_prime_UTR 20.0%
!!! AATGGTTTGTAGATATAATA+TGG - chr8_2:48784640-48784659 Msa1252030:intron 20.0%
!! GAAAGATAAAAAAGAAAACT+AGG - chr8_2:48784906-48784925 Msa1252030:intron 20.0%
!! AGATAAGAAATATCTTAAAC+AGG - chr8_2:48784988-48785007 Msa1252030:intron 20.0%
!! GATAAGAAATATCTTAAACA+GGG - chr8_2:48784989-48785008 Msa1252030:intron 20.0%
!! ATAAGAAATATCTTAAACAG+GGG - chr8_2:48784990-48785009 Msa1252030:intron 20.0%
!! TCACATATAATATAGTGAAT+TGG - chr8_2:48785068-48785087 Msa1252030:intron 20.0%
!! AAAAACATTGAACAACTAAT+GGG + chr8_2:48785172-48785191 None:intergenic 20.0%
!! TAAAAACATTGAACAACTAA+TGG + chr8_2:48785173-48785192 None:intergenic 20.0%
!!! CAATGTTTTTATACTTTCAA+TGG - chr8_2:48785182-48785201 Msa1252030:intron 20.0%
!! AATGTGAAAAATAGTTCAAA+TGG + chr8_2:48785232-48785251 None:intergenic 20.0%
!!! ATTTTTCTCTCTTAATTTAC+AGG - chr8_2:48785358-48785377 Msa1252030:intron 20.0%
!! TTAATTTACAGGTTGTATTT+GGG - chr8_2:48785369-48785388 Msa1252030:intron 20.0%
!! TTTAATCGATTGAGAGATTT+TGG - chr8_2:48778261-48778280 Msa1252030:intron 25.0%
!!! TGTGTTTTTGTTCCATTTTT+TGG - chr8_2:48778311-48778330 Msa1252030:intron 25.0%
! TCTTCAAACAAATCGATTAA+AGG + chr8_2:48778405-48778424 None:intergenic 25.0%
!!! ATCGATTTGTTTGAAGATTT+TGG - chr8_2:48778408-48778427 Msa1252030:CDS 25.0%
!! TATGTTCGGGAAATTTTATT+TGG - chr8_2:48778479-48778498 Msa1252030:CDS 25.0%
! TTTGATGTCTCAAAAAATCA+TGG - chr8_2:48778525-48778544 Msa1252030:intron 25.0%
!!! TGAATCATTGAAGCATTTTT+CGG + chr8_2:48778553-48778572 None:intergenic 25.0%
! AATGATTCAGGAAATATGTT+TGG - chr8_2:48778564-48778583 Msa1252030:intron 25.0%
!!! GAGGGTATTCTTAAATATTT+TGG - chr8_2:48778662-48778681 Msa1252030:intron 25.0%
! AAAATGAGATTAAACTGGTT+TGG - chr8_2:48778856-48778875 Msa1252030:intron 25.0%
! TGGATTGTAATATTTAGTCA+AGG + chr8_2:48778946-48778965 None:intergenic 25.0%
!! TTGAACATTATATCGGATTT+TGG - chr8_2:48779077-48779096 Msa1252030:CDS 25.0%
!! GAAATCTAAAATCAATATCC+AGG + chr8_2:48779140-48779159 None:intergenic 25.0%
!! TTTAATCGATTGAGAGATTT+TGG - chr8_2:48778261-48778280 Msa1252030:intron 25.0%
!!! TGTGTTTTTGTTCCATTTTT+TGG - chr8_2:48778311-48778330 Msa1252030:intron 25.0%
! TCTTCAAACAAATCGATTAA+AGG + chr8_2:48778405-48778424 None:intergenic 25.0%
!!! ATCGATTTGTTTGAAGATTT+TGG - chr8_2:48778408-48778427 Msa1252030:CDS 25.0%
!! TATGTTCGGGAAATTTTATT+TGG - chr8_2:48778479-48778498 Msa1252030:CDS 25.0%
! TTTGATGTCTCAAAAAATCA+TGG - chr8_2:48778525-48778544 Msa1252030:intron 25.0%
!!! TGAATCATTGAAGCATTTTT+CGG + chr8_2:48778553-48778572 None:intergenic 25.0%
! AATGATTCAGGAAATATGTT+TGG - chr8_2:48778564-48778583 Msa1252030:intron 25.0%
!!! GAGGGTATTCTTAAATATTT+TGG - chr8_2:48778662-48778681 Msa1252030:intron 25.0%
! AAAATGAGATTAAACTGGTT+TGG - chr8_2:48778856-48778875 Msa1252030:intron 25.0%
! TGGATTGTAATATTTAGTCA+AGG + chr8_2:48778946-48778965 None:intergenic 25.0%
!! TTGAACATTATATCGGATTT+TGG - chr8_2:48779077-48779096 Msa1252030:CDS 25.0%
!! GAAATCTAAAATCAATATCC+AGG + chr8_2:48779140-48779159 None:intergenic 25.0%
! TATACATGTGTGAATAATGA+AGG + chr8_2:48780519-48780538 None:intergenic 25.0%
! TCATTATTCACACATGTATA+TGG - chr8_2:48780519-48780538 Msa1252030:intron 25.0%
!! ATCTTTTGCTTTGATTATGT+TGG - chr8_2:48780582-48780601 Msa1252030:intron 25.0%
!! TTTGAATATTCTTTGGTTTC+AGG - chr8_2:48780899-48780918 Msa1252030:CDS 25.0%
!! ATACTACTATCTTTTAGCAT+TGG - chr8_2:48780986-48781005 Msa1252030:CDS 25.0%
! ATAAGAACTCATTTAGAAGA+AGG + chr8_2:48781015-48781034 None:intergenic 25.0%
!!! TTTTCATTGTTTCTTTTGTC+TGG - chr8_2:48781088-48781107 Msa1252030:exon 25.0%
!!! TTTCATTGTTTCTTTTGTCT+GGG - chr8_2:48781089-48781108 Msa1252030:five_prime_UTR 25.0%
!!! GTTTTATAATTTCTAGCTTC+TGG - chr8_2:48781794-48781813 Msa1252030:five_prime_UTR 25.0%
!!! ATCTTAATATTTTTGTAGGC+TGG - chr8_2:48781898-48781917 Msa1252030:five_prime_UTR 25.0%
! TATGAACTTTGTAGATTACA+AGG - chr8_2:48782048-48782067 Msa1252030:five_prime_UTR 25.0%
! TGGAAATGATATAAGTTAGT+TGG - chr8_2:48782086-48782105 Msa1252030:five_prime_UTR 25.0%
! AAAATTTAGCAAGGGAAAAT+TGG - chr8_2:48782192-48782211 Msa1252030:five_prime_UTR 25.0%
!! GTGTGTTTTATCTATAAAAG+AGG + chr8_2:48782247-48782266 None:intergenic 25.0%
! AGTAACTTAATAAATAGCCT+TGG - chr8_2:48782348-48782367 Msa1252030:five_prime_UTR 25.0%
! TCTCATCTCAATATGAATTA+TGG - chr8_2:48782591-48782610 Msa1252030:five_prime_UTR 25.0%
!! GTACATCAGTCTAAATTTTA+CGG + chr8_2:48782731-48782750 None:intergenic 25.0%
! GTACATTCTATGTTAAGAAA+AGG - chr8_2:48782747-48782766 Msa1252030:five_prime_UTR 25.0%
!! TACTTTAGGTTACATTTATC+AGG - chr8_2:48782918-48782937 Msa1252030:five_prime_UTR 25.0%
!! ACTTTAGGTTACATTTATCA+GGG - chr8_2:48782919-48782938 Msa1252030:five_prime_UTR 25.0%
! AATAAAATAACAATGAGTGC+TGG + chr8_2:48783130-48783149 None:intergenic 25.0%
! TAATGAAAAATGACCATGTT+TGG - chr8_2:48783229-48783248 Msa1252030:five_prime_UTR 25.0%
! ATAAATGATAGTTCCAAACA+TGG + chr8_2:48783245-48783264 None:intergenic 25.0%
!!! CTAAGGTTTTTTTAAAAGCA+TGG + chr8_2:48783331-48783350 None:intergenic 25.0%
!!! CATGCTTTTAAAAAAACCTT+AGG - chr8_2:48783329-48783348 Msa1252030:intron 25.0%
! TACTAACATGAATGTAATGA+AGG + chr8_2:48783425-48783444 None:intergenic 25.0%
!! CAGTTTTCTTGCATTTAATT+AGG - chr8_2:48784221-48784240 Msa1252030:intron 25.0%
!! TAGAAATCTGGTTTAGAAAA+AGG + chr8_2:48784379-48784398 None:intergenic 25.0%
! TCATCATATCTATAGAAATC+TGG + chr8_2:48784391-48784410 None:intergenic 25.0%
! AAGAAGAAGCTATATATTAC+GGG + chr8_2:48784464-48784483 None:intergenic 25.0%
! GAAGAAGAAGCTATATATTA+CGG + chr8_2:48784465-48784484 None:intergenic 25.0%
! TAATATATAGCTTCTTCTTC+TGG - chr8_2:48784465-48784484 Msa1252030:intron 25.0%
! GTCAGTTTATTAATATACAG+TGG + chr8_2:48784502-48784521 None:intergenic 25.0%
!! GCTTTTATTCAACATTTCAA+TGG - chr8_2:48784622-48784641 Msa1252030:intron 25.0%
! GTTAGAACCATAAAGAAAAT+AGG + chr8_2:48784738-48784757 None:intergenic 25.0%
! ATACATACACCAATATAAGA+AGG + chr8_2:48784760-48784779 None:intergenic 25.0%
!! ATTTTACATGTGTATACCAA+AGG - chr8_2:48784803-48784822 Msa1252030:intron 25.0%
!! TTTTACATGTGTATACCAAA+GGG - chr8_2:48784804-48784823 Msa1252030:intron 25.0%
! ATATGTGAGAACTAACTAAT+GGG + chr8_2:48785056-48785075 None:intergenic 25.0%
! TATATGTGAGAACTAACTAA+TGG + chr8_2:48785057-48785076 None:intergenic 25.0%
! CATATAAGATGATTTCAATG+TGG - chr8_2:48785123-48785142 Msa1252030:intron 25.0%
!! AAAAAGTATATCAGATTCAG+AGG - chr8_2:48785310-48785329 Msa1252030:intron 25.0%
! CTTAATTTACAGGTTGTATT+TGG - chr8_2:48785368-48785387 Msa1252030:intron 25.0%
!! GATACTTTATGCATTGTTTT+CGG + chr8_2:48785440-48785459 None:intergenic 25.0%
!! AAACAATGCATAAAGTATCT+TGG - chr8_2:48785441-48785460 Msa1252030:intron 25.0%
! CTTAATAATTCGTAAATAGC+TGG - chr8_2:48785602-48785621 Msa1252030:intron 25.0%
!!! GTTTTTATTGTGTCATTCTT+CGG - chr8_2:48785765-48785784 Msa1252030:five_prime_UTR 25.0%
ATCATCATCGTGTTAATCAA+AGG - chr8_2:48778112-48778131 Msa1252030:CDS 30.0%
ATGCATGCAGATAAGAAAAT+CGG + chr8_2:48778145-48778164 None:intergenic 30.0%
!!! GAGAGATTTTGGTTTGATTT+TGG - chr8_2:48778272-48778291 Msa1252030:intron 30.0%
GAACAGAATCAACCAAAAAA+TGG + chr8_2:48778326-48778345 None:intergenic 30.0%
!!! GAAATTTTATTTGGTGGTGA+GGG - chr8_2:48778488-48778507 Msa1252030:CDS 30.0%
GAAAAATGCTTCAATGATTC+AGG - chr8_2:48778552-48778571 Msa1252030:intron 30.0%
GAAAATTTATTTGGCTGTGA+GGG - chr8_2:48778644-48778663 Msa1252030:CDS 30.0%
TTGGTAGATTAATGTATGAC+TGG - chr8_2:48778681-48778700 Msa1252030:intron 30.0%
TATGACTGGATTATGAATGA+GGG - chr8_2:48778695-48778714 Msa1252030:intron 30.0%
AGGGAATTTGAATCTTCTTT+GGG - chr8_2:48778714-48778733 Msa1252030:intron 30.0%
!! CCAGTTTAATCTCATTTTTG+TGG + chr8_2:48778854-48778873 None:intergenic 30.0%
CCACAAAAATGAGATTAAAC+TGG - chr8_2:48778851-48778870 Msa1252030:intron 30.0%
!! TTGAAAGTCTTTCGTTTTTG+TGG - chr8_2:48779015-48779034 Msa1252030:intron 30.0%
GCTGTTGAATTCACAAAATT+TGG - chr8_2:48779108-48779127 Msa1252030:intron 30.0%
ATCATCATCGTGTTAATCAA+AGG - chr8_2:48778112-48778131 Msa1252030:CDS 30.0%
ATGCATGCAGATAAGAAAAT+CGG + chr8_2:48778145-48778164 None:intergenic 30.0%
!!! GAGAGATTTTGGTTTGATTT+TGG - chr8_2:48778272-48778291 Msa1252030:intron 30.0%
GAACAGAATCAACCAAAAAA+TGG + chr8_2:48778326-48778345 None:intergenic 30.0%
!!! GAAATTTTATTTGGTGGTGA+GGG - chr8_2:48778488-48778507 Msa1252030:CDS 30.0%
GAAAAATGCTTCAATGATTC+AGG - chr8_2:48778552-48778571 Msa1252030:intron 30.0%
GAAAATTTATTTGGCTGTGA+GGG - chr8_2:48778644-48778663 Msa1252030:CDS 30.0%
TTGGTAGATTAATGTATGAC+TGG - chr8_2:48778681-48778700 Msa1252030:intron 30.0%
TATGACTGGATTATGAATGA+GGG - chr8_2:48778695-48778714 Msa1252030:intron 30.0%
AGGGAATTTGAATCTTCTTT+GGG - chr8_2:48778714-48778733 Msa1252030:intron 30.0%
!! CCAGTTTAATCTCATTTTTG+TGG + chr8_2:48778854-48778873 None:intergenic 30.0%
CCACAAAAATGAGATTAAAC+TGG - chr8_2:48778851-48778870 Msa1252030:intron 30.0%
!! TTGAAAGTCTTTCGTTTTTG+TGG - chr8_2:48779015-48779034 Msa1252030:intron 30.0%
GCTGTTGAATTCACAAAATT+TGG - chr8_2:48779108-48779127 Msa1252030:intron 30.0%
AAAGATGTGCTAATAGACAA+TGG + chr8_2:48780568-48780587 None:intergenic 30.0%
CTTCTAAACTAAATGCTTTG+AGG - chr8_2:48780701-48780720 Msa1252030:intron 30.0%
TGTTTGATAAATTGTTGCAG+TGG - chr8_2:48780767-48780786 Msa1252030:intron 30.0%
TGAAAACTTACTCGATAAAG+CGG + chr8_2:48780821-48780840 None:intergenic 30.0%
TAGTTTATAGCTGACCTTAA+TGG - chr8_2:48781131-48781150 Msa1252030:five_prime_UTR 30.0%
TTTGAGTACCAATGAACAAA+TGG - chr8_2:48781204-48781223 Msa1252030:five_prime_UTR 30.0%
TTGAGTACCAATGAACAAAT+GGG - chr8_2:48781205-48781224 Msa1252030:five_prime_UTR 30.0%
! GGAGATTACTAATGCATTTT+TGG - chr8_2:48781226-48781245 Msa1252030:five_prime_UTR 30.0%
GTAGAACCATGAAACAATAT+TGG - chr8_2:48781262-48781281 Msa1252030:five_prime_UTR 30.0%
AATTGGCCAATATTGTTTCA+TGG + chr8_2:48781271-48781290 None:intergenic 30.0%
TTTGATATCGTTGAGAATTG+CGG - chr8_2:48781323-48781342 Msa1252030:five_prime_UTR 30.0%
!! TAAACTTGCTAGCATAATTG+AGG - chr8_2:48781455-48781474 Msa1252030:five_prime_UTR 30.0%
ATAACTTCCCTATAGAATCA+GGG + chr8_2:48781548-48781567 None:intergenic 30.0%
TATAACTTCCCTATAGAATC+AGG + chr8_2:48781549-48781568 None:intergenic 30.0%
ACATTGCAATGTAAATATGC+AGG - chr8_2:48781834-48781853 Msa1252030:five_prime_UTR 30.0%
!!! TACTAATTGGTTTTAATGGC+AGG + chr8_2:48782329-48782348 None:intergenic 30.0%
!!! TACCTTGTTTTTTACACAAG+AGG + chr8_2:48782435-48782454 None:intergenic 30.0%
CTTGTGTAAAAAACAAGGTA+AGG - chr8_2:48782435-48782454 Msa1252030:five_prime_UTR 30.0%
TCTCTATCTAAACTTTCAGA+TGG - chr8_2:48782665-48782684 Msa1252030:five_prime_UTR 30.0%
TATCTAAACTTTCAGATGGA+AGG - chr8_2:48782669-48782688 Msa1252030:five_prime_UTR 30.0%
ATTATCAGTAACCATACACA+AGG - chr8_2:48783169-48783188 Msa1252030:intron 30.0%
TTATCAGTAACCATACACAA+GGG - chr8_2:48783170-48783189 Msa1252030:intron 30.0%
TAACCTCAATACTATGTTGA+TGG - chr8_2:48783392-48783411 Msa1252030:intron 30.0%
AGATCTCAACACAGTTAAAA+GGG + chr8_2:48783814-48783833 None:intergenic 30.0%
AATAATGGCAATATCAGATC+AGG + chr8_2:48784272-48784291 None:intergenic 30.0%
TGATCTGATATTGCCATTAT+TGG - chr8_2:48784271-48784290 Msa1252030:intron 30.0%
TGACATTACATCTGGTAAAT+AGG + chr8_2:48784327-48784346 None:intergenic 30.0%
CATTGATATGACATTACATC+TGG + chr8_2:48784335-48784354 None:intergenic 30.0%
AATATACAGTGGCAATGAAA+AGG + chr8_2:48784491-48784510 None:intergenic 30.0%
TAGATATAATATGGCAACAC+TGG - chr8_2:48784649-48784668 Msa1252030:intron 30.0%
AAATATTCCAACTGTCAAGA+AGG + chr8_2:48784689-48784708 None:intergenic 30.0%
! TTTGCTGCCTATTTTCTTTA+TGG - chr8_2:48784728-48784747 Msa1252030:intron 30.0%
!! TGGTTCTAACCTTCTTATAT+TGG - chr8_2:48784748-48784767 Msa1252030:intron 30.0%
!! TTATACTCATTGACTTGCAA+AGG - chr8_2:48785257-48785276 Msa1252030:intron 30.0%
TATATCAGATTCAGAGGAAA+CGG - chr8_2:48785316-48785335 Msa1252030:intron 30.0%
ATTATTAAGAAATGACCAGC+TGG + chr8_2:48785591-48785610 None:intergenic 30.0%
TATGAATACATTGTTTGCGA+GGG - chr8_2:48785636-48785655 Msa1252030:intron 30.0%
AAAATCATACACAAGCAATC+TGG - chr8_2:48785660-48785679 Msa1252030:intron 30.0%
! TTGTAATGAGATTTTGTAGC+TGG - chr8_2:48785731-48785750 Msa1252030:intron 30.0%
CTGGCTATATATAGTGTAAG+AGG + chr8_2:48777995-48778014 None:intergenic 35.0%
GAGTCTCTCAATCTTATAAC+TGG + chr8_2:48778014-48778033 None:intergenic 35.0%
! ATGATGATGACAAACTGAAC+CGG + chr8_2:48778094-48778113 None:intergenic 35.0%
TCATCGTGTTAATCAAAGGT+TGG - chr8_2:48778116-48778135 Msa1252030:CDS 35.0%
!!! AGATTTTGGCTGAGAGATTT+TGG - chr8_2:48778422-48778441 Msa1252030:CDS 35.0%
!! TGAGAGATTTTGGTCGATTA+TGG - chr8_2:48778432-48778451 Msa1252030:CDS 35.0%
!! GAGAGATTTTGGTCGATTAT+GGG - chr8_2:48778433-48778452 Msa1252030:CDS 35.0%
!! GTTCGGGAAATTTTATTTGG+TGG - chr8_2:48778482-48778501 Msa1252030:CDS 35.0%
!!! GGAAATTTTATTTGGTGGTG+AGG - chr8_2:48778487-48778506 Msa1252030:CDS 35.0%
GGAAAATTTATTTGGCTGTG+AGG - chr8_2:48778643-48778662 Msa1252030:CDS 35.0%
GTATGACTGGATTATGAATG+AGG - chr8_2:48778694-48778713 Msa1252030:intron 35.0%
GAGGGAATTTGAATCTTCTT+TGG - chr8_2:48778713-48778732 Msa1252030:intron 35.0%
! GAGTTTTCTTTGTGTACCTT+TGG - chr8_2:48778819-48778838 Msa1252030:intron 35.0%
!! ATATCGGATTTTGGTGACTT+TGG - chr8_2:48779086-48779105 Msa1252030:CDS 35.0%
CACAAAATTTGGATAAGACC+TGG - chr8_2:48779119-48779138 Msa1252030:intron 35.0%
CTGGCTATATATAGTGTAAG+AGG + chr8_2:48777995-48778014 None:intergenic 35.0%
GAGTCTCTCAATCTTATAAC+TGG + chr8_2:48778014-48778033 None:intergenic 35.0%
! ATGATGATGACAAACTGAAC+CGG + chr8_2:48778094-48778113 None:intergenic 35.0%
TCATCGTGTTAATCAAAGGT+TGG - chr8_2:48778116-48778135 Msa1252030:CDS 35.0%
!!! AGATTTTGGCTGAGAGATTT+TGG - chr8_2:48778422-48778441 Msa1252030:CDS 35.0%
!! TGAGAGATTTTGGTCGATTA+TGG - chr8_2:48778432-48778451 Msa1252030:CDS 35.0%
!! GAGAGATTTTGGTCGATTAT+GGG - chr8_2:48778433-48778452 Msa1252030:CDS 35.0%
!! GTTCGGGAAATTTTATTTGG+TGG - chr8_2:48778482-48778501 Msa1252030:CDS 35.0%
!!! GGAAATTTTATTTGGTGGTG+AGG - chr8_2:48778487-48778506 Msa1252030:CDS 35.0%
GGAAAATTTATTTGGCTGTG+AGG - chr8_2:48778643-48778662 Msa1252030:CDS 35.0%
GTATGACTGGATTATGAATG+AGG - chr8_2:48778694-48778713 Msa1252030:intron 35.0%
GAGGGAATTTGAATCTTCTT+TGG - chr8_2:48778713-48778732 Msa1252030:intron 35.0%
! GAGTTTTCTTTGTGTACCTT+TGG - chr8_2:48778819-48778838 Msa1252030:intron 35.0%
!! ATATCGGATTTTGGTGACTT+TGG - chr8_2:48779086-48779105 Msa1252030:CDS 35.0%
CACAAAATTTGGATAAGACC+TGG - chr8_2:48779119-48779138 Msa1252030:intron 35.0%
! TTTAGAAGCACATACCATTG+GGG + chr8_2:48780689-48780708 None:intergenic 35.0%
! GTTTAGAAGCACATACCATT+GGG + chr8_2:48780690-48780709 None:intergenic 35.0%
! AGTTTAGAAGCACATACCAT+TGG + chr8_2:48780691-48780710 None:intergenic 35.0%
!!! ATGCTTTGAGGAGTTTTATG+TGG - chr8_2:48780713-48780732 Msa1252030:intron 35.0%
GATAAATTGTTGCAGTGGAA+CGG - chr8_2:48780772-48780791 Msa1252030:intron 35.0%
ATAAATTGTTGCAGTGGAAC+GGG - chr8_2:48780773-48780792 Msa1252030:intron 35.0%
!! TCGATAAAGCGGACTATATT+TGG + chr8_2:48780810-48780829 None:intergenic 35.0%
ACTATCATGGTTCCTTGATT+TGG + chr8_2:48781115-48781134 None:intergenic 35.0%
AGGTCAGCTATAAACTATCA+TGG + chr8_2:48781128-48781147 None:intergenic 35.0%
TACAGCTAACTACACCATTA+AGG + chr8_2:48781148-48781167 None:intergenic 35.0%
GTAATCTCCCATTTGTTCAT+TGG + chr8_2:48781215-48781234 None:intergenic 35.0%
! TTGTTTCATGGTTCTACGTT+TGG + chr8_2:48781259-48781278 None:intergenic 35.0%
!! TTTGATAATGTTGCGCTGAT+GGG - chr8_2:48781390-48781409 Msa1252030:five_prime_UTR 35.0%
ATTGAGGTTTCTGCAAAGAA+AGG - chr8_2:48781471-48781490 Msa1252030:five_prime_UTR 35.0%
!! AGTTGATGAACCAAGTTGAT+TGG - chr8_2:48781520-48781539 Msa1252030:five_prime_UTR 35.0%
ATCATAATTGCTAGCACTCA+AGG + chr8_2:48781641-48781660 None:intergenic 35.0%
ACAGCCACAGTTGTAAAAAT+TGG - chr8_2:48781662-48781681 Msa1252030:five_prime_UTR 35.0%
CAGCCACAGTTGTAAAAATT+GGG - chr8_2:48781663-48781682 Msa1252030:five_prime_UTR 35.0%
TATGCAGGATAGAGATATCT+AGG - chr8_2:48781849-48781868 Msa1252030:five_prime_UTR 35.0%
ATGCAGGATAGAGATATCTA+GGG - chr8_2:48781850-48781869 Msa1252030:five_prime_UTR 35.0%
ACCCTGTGACAGTATAAATT+TGG - chr8_2:48781963-48781982 Msa1252030:five_prime_UTR 35.0%
CCCAAATTTATACTGTCACA+GGG + chr8_2:48781967-48781986 None:intergenic 35.0%
CCCTGTGACAGTATAAATTT+GGG - chr8_2:48781964-48781983 Msa1252030:five_prime_UTR 35.0%
CCTGTGACAGTATAAATTTG+GGG - chr8_2:48781965-48781984 Msa1252030:five_prime_UTR 35.0%
GGATCAGCTAAATTCTTTAC+TGG - chr8_2:48781986-48782005 Msa1252030:five_prime_UTR 35.0%
AATTCTTTACTGGAAGTTGC+TGG - chr8_2:48781996-48782015 Msa1252030:five_prime_UTR 35.0%
GTAGATTACAAGGTAGATAC+TGG - chr8_2:48782058-48782077 Msa1252030:five_prime_UTR 35.0%
AGCCTCTTGTGTAAAAAACA+AGG - chr8_2:48782430-48782449 Msa1252030:five_prime_UTR 35.0%
ATGCATGTATGTGTCTCATT+AGG - chr8_2:48782802-48782821 Msa1252030:five_prime_UTR 35.0%
GGATTTGAAAATGTGCACTT+TGG + chr8_2:48782854-48782873 None:intergenic 35.0%
TCTCATCTTCGAAGAGATTA+TGG - chr8_2:48782888-48782907 Msa1252030:five_prime_UTR 35.0%
GGTTACATTTATCAGGGAAA+TGG - chr8_2:48782925-48782944 Msa1252030:five_prime_UTR 35.0%
ACATTTATCAGGGAAATGGA+AGG - chr8_2:48782929-48782948 Msa1252030:five_prime_UTR 35.0%
CATTTATCAGGGAAATGGAA+GGG - chr8_2:48782930-48782949 Msa1252030:five_prime_UTR 35.0%
TATCAGTAACCATACACAAG+GGG - chr8_2:48783171-48783190 Msa1252030:intron 35.0%
AAAACATAACCCCTTGTGTA+TGG + chr8_2:48783183-48783202 None:intergenic 35.0%
! TACACAAGGGGTTATGTTTT+AGG - chr8_2:48783183-48783202 Msa1252030:intron 35.0%
! TGGTATGTGTGCTATTGATA+TGG - chr8_2:48783301-48783320 Msa1252030:intron 35.0%
AAGCCATCAACATAGTATTG+AGG + chr8_2:48783398-48783417 None:intergenic 35.0%
TAACCTTGTCACAAATGGAT+TGG + chr8_2:48783456-48783475 None:intergenic 35.0%
AAGCTTAACCTTGTCACAAA+TGG + chr8_2:48783461-48783480 None:intergenic 35.0%
TTGTGCTTATCATGTTCAGT+TGG - chr8_2:48783596-48783615 Msa1252030:intron 35.0%
GTAAAGACCATACAAGGTTT+AGG - chr8_2:48783663-48783682 Msa1252030:intron 35.0%
! TTTGAAGCCTAAACCTTGTA+TGG + chr8_2:48783673-48783692 None:intergenic 35.0%
CAGATCTCAACACAGTTAAA+AGG + chr8_2:48783815-48783834 None:intergenic 35.0%
CACAGTCTTAATAGATAGCA+AGG + chr8_2:48783919-48783938 None:intergenic 35.0%
AAAACTGTATCCCATGATGA+GGG - chr8_2:48784054-48784073 Msa1252030:intron 35.0%
! AATGGTAACGTCTCCAATAA+TGG + chr8_2:48784287-48784306 None:intergenic 35.0%
ATTATTGGAGACGTTACCAT+TGG - chr8_2:48784286-48784305 Msa1252030:intron 35.0%
CTATATATTACGGGACTAAG+GGG + chr8_2:48784455-48784474 None:intergenic 35.0%
GCTATATATTACGGGACTAA+GGG + chr8_2:48784456-48784475 None:intergenic 35.0%
AGCTATATATTACGGGACTA+AGG + chr8_2:48784457-48784476 None:intergenic 35.0%
CTCAAATCACAATGGAAACT+TGG - chr8_2:48784576-48784595 Msa1252030:five_prime_UTR 35.0%
TTTCTTACCTTCTTGACAGT+TGG - chr8_2:48784679-48784698 Msa1252030:intron 35.0%
GTATGTATCAGAAAACAGTG+TGG - chr8_2:48784772-48784791 Msa1252030:intron 35.0%
ATACCAAAGGGATATGCAAT+TGG - chr8_2:48784816-48784835 Msa1252030:intron 35.0%
TATGCAATTGGCTATGTCTA+TGG - chr8_2:48784828-48784847 Msa1252030:intron 35.0%
TACAGGTTGTATTTGGGAAA+TGG - chr8_2:48785375-48785394 Msa1252030:intron 35.0%
ACAGGTTGTATTTGGGAAAT+GGG - chr8_2:48785376-48785395 Msa1252030:intron 35.0%
CTATGAATACATTGTTTGCG+AGG - chr8_2:48785635-48785654 Msa1252030:intron 35.0%
CTCATTACAAAACATCCACT+TGG + chr8_2:48785721-48785740 None:intergenic 35.0%
TTAGGATGGTTTATGTGTCT+CGG - chr8_2:48785824-48785843 Msa1252030:five_prime_UTR 35.0%
TTTCACCAACTGTTGTGTAT+CGG + chr8_2:48785872-48785891 None:intergenic 35.0%
AAACCTGGGCAATATAGCAA+CGG + chr8_2:48778067-48778086 None:intergenic 40.0%
CGACTAAGCTACATGAAGAA+GGG + chr8_2:48778204-48778223 None:intergenic 40.0%
TCGACTAAGCTACATGAAGA+AGG + chr8_2:48778205-48778224 None:intergenic 40.0%
GTCGATTGAGAGACTATGTT+TGG - chr8_2:48778220-48778239 Msa1252030:intron 40.0%
!! GAATCTTCTTTGGGTTGATG+AGG - chr8_2:48778723-48778742 Msa1252030:intron 40.0%
! GGATGAACAGCTTCTAAGAA+TGG - chr8_2:48778792-48778811 Msa1252030:intron 40.0%
TTTGTGGATTCAACAGCCAA+AGG + chr8_2:48778838-48778857 None:intergenic 40.0%
AAACCTGGGCAATATAGCAA+CGG + chr8_2:48778067-48778086 None:intergenic 40.0%
CGACTAAGCTACATGAAGAA+GGG + chr8_2:48778204-48778223 None:intergenic 40.0%
TCGACTAAGCTACATGAAGA+AGG + chr8_2:48778205-48778224 None:intergenic 40.0%
GTCGATTGAGAGACTATGTT+TGG - chr8_2:48778220-48778239 Msa1252030:intron 40.0%
!! GAATCTTCTTTGGGTTGATG+AGG - chr8_2:48778723-48778742 Msa1252030:intron 40.0%
! GGATGAACAGCTTCTAAGAA+TGG - chr8_2:48778792-48778811 Msa1252030:intron 40.0%
TTTGTGGATTCAACAGCCAA+AGG + chr8_2:48778838-48778857 None:intergenic 40.0%
! GTGCTAATAGACAATGGACT+TGG + chr8_2:48780562-48780581 None:intergenic 40.0%
! TTAGAAGCACATACCATTGG+GGG + chr8_2:48780688-48780707 None:intergenic 40.0%
TGGAATAACATGAGCATCTG+AGG + chr8_2:48780956-48780975 None:intergenic 40.0%
GTCTAATTCGACCGCAATTT+AGG + chr8_2:48781370-48781389 None:intergenic 40.0%
!! CTTTGATAATGTTGCGCTGA+TGG - chr8_2:48781389-48781408 Msa1252030:five_prime_UTR 40.0%
!! CGTTGTTTTGTAGGTCAAGA+TGG - chr8_2:48781414-48781433 Msa1252030:five_prime_UTR 40.0%
! ATTGGCTCCCTGATTCTATA+GGG - chr8_2:48781538-48781557 Msa1252030:five_prime_UTR 40.0%
AAATTGGGCCCATGACATAT+TGG - chr8_2:48781678-48781697 Msa1252030:five_prime_UTR 40.0%
!! GTCACTCTGAAACTGAACTT+AGG - chr8_2:48781772-48781791 Msa1252030:five_prime_UTR 40.0%
TGCAGGATAGAGATATCTAG+GGG - chr8_2:48781851-48781870 Msa1252030:five_prime_UTR 40.0%
CCCCAAATTTATACTGTCAC+AGG + chr8_2:48781968-48781987 None:intergenic 40.0%
AGGTGTAAATCAGTCTCTCT+GGG + chr8_2:48782309-48782328 None:intergenic 40.0%
! ATAAATAGCCTTGGCGCAAT+TGG - chr8_2:48782357-48782376 Msa1252030:five_prime_UTR 40.0%
TAAAGTTGTTGTCCTGTGAC+TGG - chr8_2:48782380-48782399 Msa1252030:five_prime_UTR 40.0%
TGCGTACAATACCAAATGGT+GGG - chr8_2:48782459-48782478 Msa1252030:five_prime_UTR 40.0%
GATGAGAAGACATGTTGCAA+AGG + chr8_2:48782875-48782894 None:intergenic 40.0%
!! AAGGGGTTATGTTTTAGGCA+AGG - chr8_2:48783188-48783207 Msa1252030:intron 40.0%
ACACCAATCCATTTGTGACA+AGG - chr8_2:48783450-48783469 Msa1252030:intron 40.0%
CACATCTTAAATTGCCAGTC+AGG + chr8_2:48783514-48783533 None:intergenic 40.0%
TGTAACTTATTACCTGCAGC+AGG + chr8_2:48783769-48783788 None:intergenic 40.0%
CAAAACTGTATCCCATGATG+AGG - chr8_2:48784053-48784072 Msa1252030:intron 40.0%
AAACTGTATCCCATGATGAG+GGG - chr8_2:48784055-48784074 Msa1252030:intron 40.0%
TAGCCAATTGCATATCCCTT+TGG + chr8_2:48784822-48784841 None:intergenic 40.0%
CTTAAACAGGGGAGAAAACT+AGG - chr8_2:48785001-48785020 Msa1252030:intron 40.0%
!! ATTGTTTTCGGAGCTTTGGT+CGG + chr8_2:48785428-48785447 None:intergenic 40.0%
! ATGCATTGTTTTCGGAGCTT+TGG + chr8_2:48785432-48785451 None:intergenic 40.0%
GACTACATGCGTCTGTTTAT+TGG - chr8_2:48785463-48785482 Msa1252030:intron 40.0%
ATGCGTCTGTTTATTGGACT+TGG - chr8_2:48785469-48785488 Msa1252030:intron 40.0%
!! GATTTTGTAGCTGGTCTGTT+CGG - chr8_2:48785740-48785759 Msa1252030:intron 40.0%
!! TGTTTTTGCAGTGGTTAGGA+TGG - chr8_2:48785810-48785829 Msa1252030:five_prime_UTR 40.0%
GGGAGAGAAAGCTGAGAAAT+AGG + chr8_2:48778046-48778065 None:intergenic 45.0%
AACCTGGGCAATATAGCAAC+GGG + chr8_2:48778066-48778085 None:intergenic 45.0%
ATATTGCCCAGGTTTCTCTC+CGG - chr8_2:48778072-48778091 Msa1252030:CDS 45.0%
!! CTGGTTTGGAGTAGAATAGC+TGG - chr8_2:48778870-48778889 Msa1252030:intron 45.0%
GGGAGAGAAAGCTGAGAAAT+AGG + chr8_2:48778046-48778065 None:intergenic 45.0%
AACCTGGGCAATATAGCAAC+GGG + chr8_2:48778066-48778085 None:intergenic 45.0%
ATATTGCCCAGGTTTCTCTC+CGG - chr8_2:48778072-48778091 Msa1252030:CDS 45.0%
!! CTGGTTTGGAGTAGAATAGC+TGG - chr8_2:48778870-48778889 Msa1252030:intron 45.0%
GCATTTCACCAAGAACCTAC+AGG - chr8_2:48780651-48780670 Msa1252030:intron 45.0%
TTTCACCAAGAACCTACAGG+AGG - chr8_2:48780654-48780673 Msa1252030:intron 45.0%
! CTTTTGTCTGGGCCAAATCA+AGG - chr8_2:48781100-48781119 Msa1252030:five_prime_UTR 45.0%
GAGAATTGCGGTCTCTAATG+TGG - chr8_2:48781335-48781354 Msa1252030:five_prime_UTR 45.0%
! GGTTGATGCTGCCTAAATTG+CGG - chr8_2:48781356-48781375 Msa1252030:five_prime_UTR 45.0%
!! CTGATGGGACGTTGTTTTGT+AGG - chr8_2:48781405-48781424 Msa1252030:five_prime_UTR 45.0%
AATCAGGGAGCCAATCAACT+TGG + chr8_2:48781533-48781552 None:intergenic 45.0%
! GATTGGCTCCCTGATTCTAT+AGG - chr8_2:48781537-48781556 Msa1252030:five_prime_UTR 45.0%
! GGGCCCAATTTTTACAACTG+TGG + chr8_2:48781669-48781688 None:intergenic 45.0%
AGCCGCAACCAATATGTCAT+GGG + chr8_2:48781689-48781708 None:intergenic 45.0%
AAGCCGCAACCAATATGTCA+TGG + chr8_2:48781690-48781709 None:intergenic 45.0%
CAAGGTAGATACTGGACTTC+TGG - chr8_2:48782066-48782085 Msa1252030:five_prime_UTR 45.0%
CAGGTGTAAATCAGTCTCTC+TGG + chr8_2:48782310-48782329 None:intergenic 45.0%
CAACTTTACCAATTGCGCCA+AGG + chr8_2:48782368-48782387 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr8_2:48782424-48782443 None:intergenic 45.0%
AGGCTGCGTACAATACCAAA+TGG - chr8_2:48782455-48782474 Msa1252030:five_prime_UTR 45.0%
CTGCGTACAATACCAAATGG+TGG - chr8_2:48782458-48782477 Msa1252030:five_prime_UTR 45.0%
AGTTACTACTAAGGGCAACC+CGG + chr8_2:48782525-48782544 None:intergenic 45.0%
CAGACAACAATCCAAGCTAC+AGG - chr8_2:48783624-48783643 Msa1252030:intron 45.0%
AACAATCCAAGCTACAGGTG+TGG - chr8_2:48783629-48783648 Msa1252030:intron 45.0%
GGTCTGGTAAAGACCATACA+AGG - chr8_2:48783657-48783676 Msa1252030:intron 45.0%
CCAATGTTGCTCAATAGTCC+AGG + chr8_2:48783745-48783764 None:intergenic 45.0%
CCTGGACTATTGAGCAACAT+TGG - chr8_2:48783742-48783761 Msa1252030:intron 45.0%
AGCATTCTTGATCCTGACGA+AGG - chr8_2:48783868-48783887 Msa1252030:intron 45.0%
TCCTGACGAAGGTAATCACT+TGG - chr8_2:48783879-48783898 Msa1252030:intron 45.0%
ACACTAATGCCCCTCATCAT+GGG + chr8_2:48784067-48784086 None:intergenic 45.0%
GGCATTAGTGTGCAGTTTGA+CGG - chr8_2:48784076-48784095 Msa1252030:intron 45.0%
!! GTGTGCAGTTTGACGGATTT+AGG - chr8_2:48784083-48784102 Msa1252030:intron 45.0%
GCAATTGGCTATGTCTATGG+TGG - chr8_2:48784831-48784850 Msa1252030:intron 45.0%
!! TTGTTTTCGGAGCTTTGGTC+GGG + chr8_2:48785427-48785446 None:intergenic 45.0%
!! TTCCTGCTTTTCTAACCAGC+TGG - chr8_2:48785573-48785592 Msa1252030:intron 45.0%
CCTAACCACTGCAAAAACAC+CGG + chr8_2:48785809-48785828 None:intergenic 45.0%
GGTTTATGTGTCTCGGAAGT+TGG - chr8_2:48785831-48785850 Msa1252030:five_prime_UTR 45.0%
TGTGTCTCGGAAGTTGGAAT+TGG - chr8_2:48785837-48785856 Msa1252030:five_prime_UTR 45.0%
GTGTCTCGGAAGTTGGAATT+GGG - chr8_2:48785838-48785857 Msa1252030:five_prime_UTR 45.0%
GTTGTCCGATACACAACAGT+TGG - chr8_2:48785864-48785883 Msa1252030:five_prime_UTR 45.0%
GAAACACTTCTGTGCAATCG+CGG - chr8_2:48785888-48785907 Msa1252030:five_prime_UTR 45.0%
ACTGAACCGGAGAGAAACCT+GGG + chr8_2:48778081-48778100 None:intergenic 50.0%
AACTGAACCGGAGAGAAACC+TGG + chr8_2:48778082-48778101 None:intergenic 50.0%
!! TCTTTGGGTTGATGAGGTGC+AGG - chr8_2:48778729-48778748 Msa1252030:intron 50.0%
ACTGAACCGGAGAGAAACCT+GGG + chr8_2:48778081-48778100 None:intergenic 50.0%
AACTGAACCGGAGAGAAACC+TGG + chr8_2:48778082-48778101 None:intergenic 50.0%
!! TCTTTGGGTTGATGAGGTGC+AGG - chr8_2:48778729-48778748 Msa1252030:intron 50.0%
CAACACCTCCTGTAGGTTCT+TGG + chr8_2:48780662-48780681 None:intergenic 50.0%
AACTCGTGATCTCAAGCTCC+AGG - chr8_2:48781494-48781513 Msa1252030:five_prime_UTR 50.0%
ACTCGTGATCTCAAGCTCCA+GGG - chr8_2:48781495-48781514 Msa1252030:five_prime_UTR 50.0%
CTTGGTTCATCAACTTGCCC+TGG + chr8_2:48781515-48781534 None:intergenic 50.0%
! GGCCCATGACATATTGGTTG+CGG - chr8_2:48781684-48781703 Msa1252030:five_prime_UTR 50.0%
GTTGTTGTCCTGTGACTGGA+AGG - chr8_2:48782384-48782403 Msa1252030:five_prime_UTR 50.0%
TCCTGTGACTGGAAGGTCAT+GGG - chr8_2:48782391-48782410 Msa1252030:five_prime_UTR 50.0%
AAGGTCATGGGTTCAAGTCC+TGG - chr8_2:48782403-48782422 Msa1252030:five_prime_UTR 50.0%
! AATGGAAGGGCATGTTGTGC+TGG - chr8_2:48782943-48782962 Msa1252030:five_prime_UTR 50.0%
GCTGTTGCTAATGACGCAAG+AGG - chr8_2:48782979-48782998 Msa1252030:intron 50.0%
GTTGCTAATGACGCAAGAGG+AGG - chr8_2:48782982-48783001 Msa1252030:intron 50.0%
!! GAGTGCTGGTCACAATAGCT+CGG + chr8_2:48783116-48783135 None:intergenic 50.0%
CGGCTCAACTAACTCTGTTG+TGG - chr8_2:48783368-48783387 Msa1252030:intron 50.0%
AGTGCTCATGATGTCCTGAC+TGG - chr8_2:48783497-48783516 Msa1252030:intron 50.0%
AAGATGTTGCAGCAGTTGCC+TGG - chr8_2:48783724-48783743 Msa1252030:intron 50.0%
GCCAAGTGATTACCTTCGTC+AGG + chr8_2:48783883-48783902 None:intergenic 50.0%
CACACTAATGCCCCTCATCA+TGG + chr8_2:48784068-48784087 None:intergenic 50.0%
! TGGCTATGTCTATGGTGGAG+TGG - chr8_2:48784836-48784855 Msa1252030:intron 50.0%
!! TGTTTTCGGAGCTTTGGTCG+GGG + chr8_2:48785426-48785445 None:intergenic 50.0%
GACCAGCTGGTTAGAAAAGC+AGG + chr8_2:48785578-48785597 None:intergenic 50.0%
ATGACTCTGACGATGCCAAG+TGG - chr8_2:48785703-48785722 Msa1252030:intron 50.0%
!! CCGGTGTTTTTGCAGTGGTT+AGG - chr8_2:48785806-48785825 Msa1252030:five_prime_UTR 50.0%
CTCCCGTTGCTATATTGCCC+AGG - chr8_2:48778061-48778080 Msa1252030:CDS 55.0%
CTCCCGTTGCTATATTGCCC+AGG - chr8_2:48778061-48778080 Msa1252030:CDS 55.0%
! GGGGTATCAACACCTCCTGT+AGG + chr8_2:48780669-48780688 None:intergenic 55.0%
!! GGAGGTGTTGATACCCCCAA+TGG - chr8_2:48780672-48780691 Msa1252030:intron 55.0%
GTCCTGTGACTGGAAGGTCA+TGG - chr8_2:48782390-48782409 Msa1252030:five_prime_UTR 55.0%
ACCCATGACCTTCCAGTCAC+AGG + chr8_2:48782395-48782414 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+AGG + chr8_2:48782498-48782517 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr8_2:48782503-48782522 Msa1252030:five_prime_UTR 55.0%
CAGCTGGTGTAGGTTGCCTA+AGG + chr8_2:48783348-48783367 None:intergenic 55.0%
TAGGCAACCTACACCAGCTG+CGG - chr8_2:48783348-48783367 Msa1252030:intron 55.0%
AGAGTTAGTTGAGCCGCAGC+TGG + chr8_2:48783364-48783383 None:intergenic 55.0%
CTGAAGCCACACCTGTAGCT+TGG + chr8_2:48783638-48783657 None:intergenic 55.0%
CAAGCTACAGGTGTGGCTTC+AGG - chr8_2:48783636-48783655 Msa1252030:intron 55.0%
TACAGGTGTGGCTTCAGGTC+TGG - chr8_2:48783641-48783660 Msa1252030:intron 55.0%
AGCAACATTGGACCTGCTGC+AGG - chr8_2:48783754-48783773 Msa1252030:intron 55.0%
GAAGCTAGACGCTGCTCCAA+TGG + chr8_2:48784305-48784324 None:intergenic 55.0%
!! GTTTTCGGAGCTTTGGTCGG+GGG + chr8_2:48785425-48785444 None:intergenic 55.0%
GCTGTCATGCTCATCTGCAC+CGG - chr8_2:48785787-48785806 Msa1252030:five_prime_UTR 55.0%
!! CTGCACCGGTGTTTTTGCAG+TGG - chr8_2:48785801-48785820 Msa1252030:five_prime_UTR 55.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr8_2:48782471-48782490 Msa1252030:five_prime_UTR 60.0%
CATACGCAAGGTCCGGGAAG+GGG + chr8_2:48782486-48782505 None:intergenic 60.0%
GCATACGCAAGGTCCGGGAA+GGG + chr8_2:48782487-48782506 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG - chr8_2:48782486-48782505 Msa1252030:five_prime_UTR 60.0%
TTCCCGGACCTTGCGTATGC+GGG - chr8_2:48782487-48782506 Msa1252030:five_prime_UTR 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr8_2:48782504-48782523 Msa1252030:five_prime_UTR 60.0%
! GGAAGGGCATGTTGTGCTGG+TGG - chr8_2:48782946-48782965 Msa1252030:five_prime_UTR 60.0%
AGTTGAGCCGCAGCTGGTGT+AGG + chr8_2:48783358-48783377 None:intergenic 60.0%
CGGGAAGGGGTCCCACCATT+TGG + chr8_2:48782473-48782492 None:intergenic 65.0%
CGCATACGCAAGGTCCGGGA+AGG + chr8_2:48782488-48782507 None:intergenic 65.0%
CTCCCGCATACGCAAGGTCC+GGG + chr8_2:48782492-48782511 None:intergenic 65.0%
GCTCCCGCATACGCAAGGTC+CGG + chr8_2:48782493-48782512 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 48777975 48785915 48777975 ID=Msa1252030;Name=Msa1252030
chr8_2 mRNA 48777975 48785915 48777975 ID=Msa1252030-mRNA-1;Parent=Msa1252030;Name=Msa1252030-mRNA-1;_AED=0.23;_eAED=0.23;_QI=2306|0.53|0.64|0.85|0.69|0.64|14|0|281
chr8_2 exon 48777975 48778140 48777975 ID=Msa1252030-mRNA-1:exon:14702;Parent=Msa1252030-mRNA-1
chr8_2 exon 48778400 48778510 48778400 ID=Msa1252030-mRNA-1:exon:14701;Parent=Msa1252030-mRNA-1
chr8_2 exon 48778612 48778667 48778612 ID=Msa1252030-mRNA-1:exon:14700;Parent=Msa1252030-mRNA-1
chr8_2 exon 48779033 48779107 48779033 ID=Msa1252030-mRNA-1:exon:14699;Parent=Msa1252030-mRNA-1
chr8_2 exon 48779553 48779647 48779553 ID=Msa1252030-mRNA-1:exon:14698;Parent=Msa1252030-mRNA-1
chr8_2 exon 48780001 48780024 48780001 ID=Msa1252030-mRNA-1:exon:14697;Parent=Msa1252030-mRNA-1
chr8_2 exon 48780115 48780154 48780115 ID=Msa1252030-mRNA-1:exon:14696;Parent=Msa1252030-mRNA-1
chr8_2 exon 48780228 48780275 48780228 ID=Msa1252030-mRNA-1:exon:14695;Parent=Msa1252030-mRNA-1
chr8_2 exon 48780419 48780447 48780419 ID=Msa1252030-mRNA-1:exon:14694;Parent=Msa1252030-mRNA-1
chr8_2 exon 48780887 48782969 48780887 ID=Msa1252030-mRNA-1:exon:14693;Parent=Msa1252030-mRNA-1
chr8_2 exon 48783061 48783103 48783061 ID=Msa1252030-mRNA-1:exon:14692;Parent=Msa1252030-mRNA-1
chr8_2 exon 48783197 48783270 48783197 ID=Msa1252030-mRNA-1:exon:14691;Parent=Msa1252030-mRNA-1
chr8_2 exon 48784485 48784633 48784485 ID=Msa1252030-mRNA-1:exon:14690;Parent=Msa1252030-mRNA-1
chr8_2 exon 48785757 48785915 48785757 ID=Msa1252030-mRNA-1:exon:14689;Parent=Msa1252030-mRNA-1
chr8_2 five_prime_UTR 48785757 48785915 48785757 ID=Msa1252030-mRNA-1:five_prime_utr;Parent=Msa1252030-mRNA-1
chr8_2 five_prime_UTR 48784485 48784633 48784485 ID=Msa1252030-mRNA-1:five_prime_utr;Parent=Msa1252030-mRNA-1
chr8_2 five_prime_UTR 48783197 48783270 48783197 ID=Msa1252030-mRNA-1:five_prime_utr;Parent=Msa1252030-mRNA-1
chr8_2 five_prime_UTR 48783061 48783103 48783061 ID=Msa1252030-mRNA-1:five_prime_utr;Parent=Msa1252030-mRNA-1
chr8_2 five_prime_UTR 48781089 48782969 48781089 ID=Msa1252030-mRNA-1:five_prime_utr;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48780887 48781088 48780887 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48780419 48780447 48780419 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48780228 48780275 48780228 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48780115 48780154 48780115 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48780001 48780024 48780001 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48779553 48779647 48779553 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48779033 48779107 48779033 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48778612 48778667 48778612 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48778400 48778510 48778400 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
chr8_2 CDS 48777975 48778140 48777975 ID=Msa1252030-mRNA-1:cds;Parent=Msa1252030-mRNA-1
Gene Sequence

>Msa1252030

ATGCATGTATGTGTCTCATTAGGAATTCTGAATAAATTAAAGACTCAAACCAAAGTGCACATTTTCAAATCCTTTGCAACATGTCTTCTCATCTTCGAAGAGATTATGGATTTTCTTACTTTAGGTTACATTTATCAGGGAAATGGAAGGGCATGTTGTGCTGGTGGTGATGTTGCAGCTGTTGCTAATGACGCAAGAGGAGTATCTGAACACCAATCCATTTGTGACAAGTTGGAAAAGCAGACAACAATCCAAGCTACAGGTGTGGCTTCAGGTCTGCAGTTGCCTGGACTATTGAGCAACATTGGACCTGCTGCAGATAGCATTCTTGATCCTGACGAAGGCTTTGAACTCAGTGACATTTTGAAGCCTGATCTGATATTGCCATTATTGGAGACGTTACCATTGGAGCAGCGTCTAGCTTCCTATTTACCAGATAAAACAGTGTGGCTTTCTATATTTTACATGTGTATACCAAAGGGATATGCAATTGGCTATGTCTATGGTGGAGTGTGTTTTCCATTTGAACTATTTTTCACATTGATGCTTATACTCATTGACTTGCAAAGGTTGTATTTGGGAAATGGGAAAACTCTTGATCTTGATCGCAGCCCCCGACCAAAGCTCCGAAAACAATGCATAAAGTATCTTGGACTACATGCGTCTGTTTATTGGACTTGCTGGTCTGTTCGGTTGTTTTTATTGTGTCATTCTTCGGCTGTCATGCTCATCTGCACCGGTGTTTTTGCAGTGGTTAGGATGGTTTATGTGTCTCGGAAGTTGGAATTGGGAGTGTTGTCCGATACACAACAGTTGGTGAAACACTTCTGTGCAATCGCGGTGTAG
Protein sequence

>Msa1252030

MHVCVSLGILNKLKTQTKVHIFKSFATCLLIFEEIMDFLTLGYIYQGNGRACCAGGDVAAVANDARGVSEHQSICDKLEKQTTIQATGVASGLQLPGLLSNIGPAADSILDPDEGFELSDILKPDLILPLLETLPLEQRLASYLPDKTVWLSIFYMCIPKGYAIGYVYGGVCFPFELFFTLMLILIDLQRLYLGNGKTLDLDRSPRPKLRKQCIKYLGLHASVYWTCWSVRLFLLCHSSAVMLICTGVFAVVRMVYVSRKLELGVLSDTQQLVKHFCAIAV*