Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252500 | XP_013446199.1 | 99.360 | 781 | 5 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252500 | sp|Q93ZF5|PHO11_ARATH | 67.970 | 793 | 233 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1049 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1252500 | Msa1426230 | 0.850553 | 1.576066e-60 | -8.615850e-47 |
| Msa1198970 | Msa1252500 | 0.954424 | 3.050720e-112 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252500 | MtrunA17_Chr8g0368741 | 99.360 | 781 | 5 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1615 |
| Msa1252500 | MtrunA17_Chr1g0187381 | 47.296 | 795 | 379 | 9 | 1 | 779 | 54 | 824 | 0.0 | 728 |
| Msa1252500 | MtrunA17_Chr1g0166651 | 45.823 | 790 | 399 | 7 | 1 | 779 | 1 | 772 | 0.0 | 696 |
| Msa1252500 | MtrunA17_Chr2g0302531 | 34.988 | 826 | 460 | 25 | 2 | 781 | 1 | 795 | 2.34e-145 | 446 |
| Msa1252500 | MtrunA17_Chr5g0417841 | 34.005 | 794 | 462 | 16 | 4 | 779 | 3 | 752 | 5.23e-145 | 444 |
| Msa1252500 | MtrunA17_Chr7g0217801 | 35.872 | 814 | 453 | 22 | 2 | 781 | 1 | 779 | 1.06e-143 | 441 |
| Msa1252500 | MtrunA17_Chr7g0217771 | 41.429 | 350 | 195 | 7 | 439 | 781 | 3 | 349 | 8.83e-85 | 273 |
| Msa1252500 | MtrunA17_Chr7g0217821 | 39.255 | 349 | 204 | 5 | 439 | 781 | 3 | 349 | 1.35e-77 | 254 |
| Msa1252500 | MtrunA17_Chr7g0217831 | 31.436 | 404 | 233 | 13 | 2 | 388 | 1 | 377 | 9.42e-39 | 148 |
| Msa1252500 | MtrunA17_Chr2g0322931 | 30.655 | 336 | 212 | 11 | 432 | 755 | 111 | 437 | 2.85e-25 | 110 |
| Msa1252500 | MtrunA17_Chr7g0217781 | 38.217 | 157 | 82 | 3 | 232 | 388 | 46 | 187 | 3.49e-22 | 95.1 |
| Msa1252500 | MtrunA17_Chr7g0246941 | 28.955 | 335 | 219 | 12 | 432 | 755 | 76 | 402 | 4.64e-21 | 96.7 |
| Msa1252500 | MtrunA17_Chr7g0217791 | 31.915 | 188 | 113 | 6 | 2 | 179 | 1 | 183 | 4.05e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252500 | AT1G68740.1 | 67.970 | 793 | 233 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1049 |
| Msa1252500 | AT1G68740.2 | 65.877 | 718 | 225 | 10 | 1 | 706 | 1 | 710 | 0.0 | 918 |
| Msa1252500 | AT3G23430.1 | 45.714 | 805 | 375 | 13 | 1 | 773 | 1 | 775 | 0.0 | 703 |
| Msa1252500 | AT3G29060.1 | 35.203 | 838 | 436 | 19 | 2 | 776 | 1 | 794 | 5.99e-151 | 461 |
| Msa1252500 | AT1G26730.1 | 37.277 | 786 | 447 | 15 | 2 | 780 | 1 | 747 | 1.07e-149 | 456 |
| Msa1252500 | AT1G35350.1 | 36.226 | 795 | 444 | 19 | 2 | 780 | 1 | 748 | 3.02e-149 | 455 |
| Msa1252500 | AT1G14040.1 | 34.881 | 840 | 456 | 20 | 2 | 780 | 1 | 810 | 9.06e-147 | 451 |
| Msa1252500 | AT4G25350.1 | 34.893 | 791 | 453 | 11 | 2 | 780 | 1 | 741 | 1.28e-144 | 443 |
| Msa1252500 | AT1G69480.2 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 4.11e-140 | 432 |
| Msa1252500 | AT1G69480.1 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 4.11e-140 | 432 |
| Msa1252500 | AT2G03260.1 | 33.453 | 834 | 470 | 17 | 2 | 780 | 1 | 804 | 3.57e-135 | 420 |
| Msa1252500 | AT2G03240.1 | 32.974 | 834 | 490 | 18 | 2 | 780 | 1 | 820 | 6.19e-131 | 409 |
| Msa1252500 | AT1G35350.2 | 41.715 | 513 | 293 | 6 | 271 | 780 | 55 | 564 | 4.26e-128 | 394 |
| Msa1252500 | AT2G03260.2 | 36.946 | 609 | 349 | 10 | 189 | 780 | 1 | 591 | 6.76e-125 | 387 |
| Msa1252500 | AT1G26730.2 | 34.540 | 718 | 424 | 15 | 2 | 712 | 1 | 679 | 3.11e-115 | 365 |
| Msa1252500 | AT2G03250.1 | 32.653 | 735 | 432 | 17 | 2 | 715 | 1 | 693 | 3.66e-105 | 339 |
| Msa1252500 | AT2G03250.2 | 31.419 | 627 | 372 | 15 | 2 | 612 | 1 | 585 | 6.76e-76 | 257 |
| Msa1252500 | AT2G32295.1 | 28.767 | 365 | 235 | 16 | 432 | 781 | 98 | 452 | 5.57e-25 | 109 |
| Msa1252500 | AT2G32295.2 | 28.767 | 365 | 235 | 16 | 432 | 781 | 98 | 452 | 5.57e-25 | 109 |
| Msa1252500 | AT5G35730.1 | 28.177 | 362 | 231 | 12 | 432 | 781 | 102 | 446 | 1.27e-22 | 102 |
Find 164 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGCTCCTTCAAGTATT+TGG | 0.098484 | 8_2:+49446951 | None:intergenic |
| GAACTCATTTGATGATTATT+TGG | 0.164431 | 8_2:+49453486 | None:intergenic |
| TGTCCTTTCTGCCATATTAT+TGG | 0.182093 | 8_2:-49448184 | Msa1252500:CDS |
| GCTTCTCCACTGAGGGAATT+TGG | 0.194566 | 8_2:+49453796 | None:intergenic |
| ACAAAAGCTTCTTTCCATTC+TGG | 0.212257 | 8_2:+49453573 | None:intergenic |
| GCTAAGGAGCCTAGAGTTTA+TGG | 0.215307 | 8_2:-49448294 | Msa1252500:CDS |
| TATTAACCTTATTGAGGTTT+TGG | 0.228739 | 8_2:+49453166 | None:intergenic |
| TTTCTACATTTCTTCCTCTA+TGG | 0.229554 | 8_2:-49449128 | Msa1252500:CDS |
| GACTATTTACTGGATGCTTT+TGG | 0.234826 | 8_2:-49449395 | Msa1252500:CDS |
| TTCCTTGGCCACTAAGAAAA+TGG | 0.237152 | 8_2:+49451639 | None:intergenic |
| GCACAAGTTCAATTCCTTCT+TGG | 0.261445 | 8_2:-49448930 | Msa1252500:CDS |
| GAGAAAGAGTTTCTTGATAG+AGG | 0.262919 | 8_2:-49453126 | Msa1252500:CDS |
| ATGGCATGTTACTATATAAC+TGG | 0.266181 | 8_2:-49448275 | Msa1252500:CDS |
| TGGTTTCATTGAGCTTTATA+AGG | 0.272211 | 8_2:-49451444 | Msa1252500:CDS |
| TTGGGACTTTGTAAGGGATT+GGG | 0.277186 | 8_2:-49447887 | Msa1252500:CDS |
| ATAAATTCAGGACTATTTAC+TGG | 0.286750 | 8_2:-49449405 | Msa1252500:intron |
| ATTTCTTAACCAAGGATTCT+TGG | 0.294130 | 8_2:+49447846 | None:intergenic |
| CACAAGATGGTGTTATATAT+TGG | 0.297048 | 8_2:+49453695 | None:intergenic |
| GTGTGATAAGGAACATAATT+TGG | 0.298051 | 8_2:-49448690 | Msa1252500:CDS |
| ACAAGAACAAAGAGAGAAAA+TGG | 0.299855 | 8_2:-49453631 | Msa1252500:exon |
| CATGCAATTACTTTCTTCAT+TGG | 0.303322 | 8_2:-49450186 | Msa1252500:intron |
| AATTGTATTGGGACTTTGTA+AGG | 0.308439 | 8_2:-49447894 | Msa1252500:CDS |
| CAGAGAACAAACAGAGGATT+TGG | 0.309805 | 8_2:-49451759 | Msa1252500:CDS |
| AACTTTCTTAGTGATGAAAA+AGG | 0.319449 | 8_2:+49453450 | None:intergenic |
| ACACGAAGCACACCACCTTC+TGG | 0.324304 | 8_2:+49451509 | None:intergenic |
| ATCTGCTCCTTCAAGTATTT+GGG | 0.324691 | 8_2:+49446952 | None:intergenic |
| TGAGCTCAAATCTGCATTCA+TGG | 0.325797 | 8_2:-49453070 | Msa1252500:CDS |
| TAGGATATTTGAATGATTAT+AGG | 0.326678 | 8_2:-49451418 | Msa1252500:intron |
| AACTTTGTACCAATTGTATT+GGG | 0.326926 | 8_2:-49447905 | Msa1252500:CDS |
| TGCATTGCTCTCCAATAATA+TGG | 0.328656 | 8_2:+49448173 | None:intergenic |
| ATCTATTTACTACTTGTCTA+TGG | 0.338255 | 8_2:-49447803 | Msa1252500:intron |
| CAACTTTGTACCAATTGTAT+TGG | 0.342154 | 8_2:-49447906 | Msa1252500:CDS |
| TTTAGACCAAAACCTCAATA+AGG | 0.348820 | 8_2:-49453172 | Msa1252500:CDS |
| AGTTTACTTGAATTGGTTCA+TGG | 0.350770 | 8_2:+49453406 | None:intergenic |
| CTGAGGGAATTTGGAAGATA+TGG | 0.351796 | 8_2:+49453805 | None:intergenic |
| TGGGACTTTGTAAGGGATTG+GGG | 0.360028 | 8_2:-49447886 | Msa1252500:CDS |
| ACCACTTCCTTTGTGTGATA+AGG | 0.361753 | 8_2:-49448702 | Msa1252500:CDS |
| TCAACTACTTTGAGATAGAT+TGG | 0.368425 | 8_2:+49450943 | None:intergenic |
| ATAAATCAATGGATTTGAAA+TGG | 0.376768 | 8_2:-49451691 | Msa1252500:CDS |
| AGGTATTAAACATTACTCTA+AGG | 0.384634 | 8_2:-49447346 | Msa1252500:CDS |
| AGAAATTAGTTACCTTGTAA+TGG | 0.385123 | 8_2:-49451567 | Msa1252500:CDS |
| TTATCCTCACATTCTTTCCT+TGG | 0.387100 | 8_2:+49451624 | None:intergenic |
| TAGCATCAGTGTCAGCAAAT+TGG | 0.391037 | 8_2:+49453214 | None:intergenic |
| AAGTTATTAGAAGAGGACTA+TGG | 0.394611 | 8_2:-49447241 | Msa1252500:CDS |
| TTCTCCCTAGGTTCTGATGC+TGG | 0.401309 | 8_2:-49448552 | Msa1252500:intron |
| ACAAATCACCTTATCAATCT+AGG | 0.401577 | 8_2:-49448030 | Msa1252500:CDS |
| ATTGGGACTTTGTAAGGGAT+TGG | 0.402051 | 8_2:-49447888 | Msa1252500:CDS |
| CATTTGACTCTACTCACAAA+AGG | 0.402742 | 8_2:-49448963 | Msa1252500:CDS |
| AGAAAGAGTTTCTTGATAGA+GGG | 0.409944 | 8_2:-49453125 | Msa1252500:CDS |
| TAAATCAATGGATTTGAAAT+GGG | 0.413347 | 8_2:-49451690 | Msa1252500:CDS |
| AAGGTAACTAATTTCTGAAA+AGG | 0.416741 | 8_2:+49451574 | None:intergenic |
| TCATCCACATTCTCTATTAA+CGG | 0.416803 | 8_2:-49452994 | Msa1252500:intron |
| CATATTTAGCATTTGATGTA+GGG | 0.422345 | 8_2:-49446985 | Msa1252500:three_prime_UTR |
| ACATTACTCTAAGGCTTGCT+TGG | 0.424324 | 8_2:-49447337 | Msa1252500:CDS |
| TCATCCTCCACTTCATGAAA+AGG | 0.425572 | 8_2:+49447031 | None:intergenic |
| ATTACAGGTGGTGAAGTTCA+TGG | 0.430366 | 8_2:-49450304 | Msa1252500:intron |
| ATTGAGCTTTATAAGGGCCT+AGG | 0.431124 | 8_2:-49451437 | Msa1252500:CDS |
| AGCTATAAGACTCAAGACTA+TGG | 0.433500 | 8_2:-49448251 | Msa1252500:CDS |
| GATCATATCCGGTGGCGGTT+TGG | 0.436146 | 8_2:-49453855 | Msa1252500:five_prime_UTR |
| GGGATTGGGGTTTGCTTCAA+AGG | 0.437085 | 8_2:-49447873 | Msa1252500:CDS |
| GGTTTCATTGAGCTTTATAA+GGG | 0.440025 | 8_2:-49451443 | Msa1252500:CDS |
| ATAAGGTTAATAAATTCTAT+AGG | 0.440648 | 8_2:-49453155 | Msa1252500:CDS |
| GAAATTCTCTAAGCAATTTG+AGG | 0.442628 | 8_2:-49453607 | Msa1252500:CDS |
| GCATATTTAGCATTTGATGT+AGG | 0.449207 | 8_2:-49446986 | Msa1252500:three_prime_UTR |
| CATATTTGCCTAGATTGATA+AGG | 0.449824 | 8_2:+49448022 | None:intergenic |
| AAAGGAACTCCAAGAATCCT+TGG | 0.449952 | 8_2:-49447855 | Msa1252500:CDS |
| GGCTGATCAACTTTGCAGTC+AGG | 0.450379 | 8_2:-49448519 | Msa1252500:intron |
| TTTCGAGATAGTTCCGACTA+AGG | 0.452433 | 8_2:-49449057 | Msa1252500:CDS |
| TTACAAAGTCCCAATACAAT+TGG | 0.458613 | 8_2:+49447896 | None:intergenic |
| TGATTATTGGCAACTTAAGA+AGG | 0.460532 | 8_2:-49453550 | Msa1252500:CDS |
| GAAAGAGTTTCTTGATAGAG+GGG | 0.460793 | 8_2:-49453124 | Msa1252500:CDS |
| TTCATGGATAAGAAAGGTAA+AGG | 0.465006 | 8_2:-49453054 | Msa1252500:CDS |
| CTTGTTTCATCAACTAGTAA+AGG | 0.467786 | 8_2:-49453264 | Msa1252500:CDS |
| AGAATTTATTAACCTTATTG+AGG | 0.469370 | 8_2:+49453160 | None:intergenic |
| TGCTAAAGGTGATCATAGAA+AGG | 0.471196 | 8_2:-49450250 | Msa1252500:CDS |
| ATGCAGAGGAAGACTCTGTT+AGG | 0.473028 | 8_2:-49451784 | Msa1252500:intron |
| AATTTGGTCACCTCTTTACA+AGG | 0.480240 | 8_2:-49448674 | Msa1252500:intron |
| CAAATGCTAAATATGCCAAT+TGG | 0.482039 | 8_2:+49446993 | None:intergenic |
| TGAGACAGATTCCTCCTCCT+TGG | 0.484421 | 8_2:+49453014 | None:intergenic |
| ATTTCTAGTGTGCAAGGAGA+TGG | 0.490178 | 8_2:-49448068 | Msa1252500:intron |
| AACTCTAGGCTCCTTAGCAT+TGG | 0.493715 | 8_2:+49448299 | None:intergenic |
| CTTTATAGGTTCCAATGCTA+AGG | 0.494715 | 8_2:-49448310 | Msa1252500:intron |
| GGTAAATTGAGGACATTATC+CGG | 0.496131 | 8_2:-49451662 | Msa1252500:CDS |
| AGAAGACTAATAATGCCAAT+TGG | 0.498492 | 8_2:-49447008 | Msa1252500:exon |
| TGACCGGTATATAATGTTGA+AGG | 0.499814 | 8_2:+49448732 | None:intergenic |
| TATAATCATTCAAATATCCT+AGG | 0.503873 | 8_2:+49451420 | None:intergenic |
| ACATCAAAATTCACTCTACA+TGG | 0.506696 | 8_2:-49449319 | Msa1252500:CDS |
| GTTTCAGCTATGTTAGCTGC+AGG | 0.508558 | 8_2:-49448000 | Msa1252500:CDS |
| ATCAATTCATTTCTTAACCA+AGG | 0.508898 | 8_2:+49447838 | None:intergenic |
| ATATTATTGGAGAGCAATGC+AGG | 0.511799 | 8_2:-49448171 | Msa1252500:intron |
| TCATGGATAAGAAAGGTAAA+GGG | 0.512773 | 8_2:-49453053 | Msa1252500:CDS |
| ATTTGACTCTACTCACAAAA+GGG | 0.513008 | 8_2:-49448962 | Msa1252500:CDS |
| GGCTGTGAAGTGATCATATC+CGG | 0.514317 | 8_2:-49453866 | None:intergenic |
| GAGGACTATGGAATTTCTAC+AGG | 0.514396 | 8_2:-49447229 | Msa1252500:intron |
| GCACTTGAAGTTATTAGAAG+AGG | 0.514485 | 8_2:-49447248 | Msa1252500:CDS |
| TGAACAAATCTTCCATTACA+AGG | 0.514803 | 8_2:+49451555 | None:intergenic |
| CATGAGCATCTAAATAATGC+TGG | 0.518926 | 8_2:-49447085 | Msa1252500:CDS |
| GTTTGAGAAGGTGTTGTCAA+AGG | 0.521767 | 8_2:+49451596 | None:intergenic |
| ATGGATTTGAAATGGGAAGA+TGG | 0.530453 | 8_2:-49451683 | Msa1252500:CDS |
| AAATTCTCTAAGCAATTTGA+GGG | 0.530514 | 8_2:-49453606 | Msa1252500:CDS |
| TGTTTACATCAACTTGAATG+AGG | 0.540287 | 8_2:+49446922 | None:intergenic |
| AAATGAAGAGGATAAATCAA+TGG | 0.543222 | 8_2:-49451702 | Msa1252500:CDS |
| ATTACCGTTAATAGAGAATG+TGG | 0.545235 | 8_2:+49452990 | None:intergenic |
| AGGGACAACTCATTCCAGAA+TGG | 0.545665 | 8_2:-49453587 | Msa1252500:CDS |
| ATTTCTGAAAAGGTTTGAGA+AGG | 0.545715 | 8_2:+49451584 | None:intergenic |
| GAATCTTTATAAATGCAAGC+AGG | 0.546938 | 8_2:+49451106 | None:intergenic |
| CAATAATGTTGCAGCCATAG+AGG | 0.547217 | 8_2:+49449114 | None:intergenic |
| AAACTGTCTATCCTGTGCTT+AGG | 0.551095 | 8_2:-49449296 | Msa1252500:intron |
| GCCCCTTCAACATTATATAC+CGG | 0.551905 | 8_2:-49448735 | Msa1252500:CDS |
| GATTCCACCCAAATACTTGA+AGG | 0.553366 | 8_2:-49446959 | Msa1252500:three_prime_UTR |
| TTCTCACTATTCCAAGGAGG+AGG | 0.553993 | 8_2:-49453025 | Msa1252500:CDS |
| AGTAACATGCCATAAACTCT+AGG | 0.555517 | 8_2:+49448285 | None:intergenic |
| TCTGCATTCATGGATAAGAA+AGG | 0.557752 | 8_2:-49453060 | Msa1252500:CDS |
| TGCTCCTTCAAGTATTTGGG+TGG | 0.558848 | 8_2:+49446955 | None:intergenic |
| ATTGTATTGGGACTTTGTAA+GGG | 0.559765 | 8_2:-49447893 | Msa1252500:CDS |
| GCAAGGAGATGGTTTGATGA+AGG | 0.560927 | 8_2:-49448057 | Msa1252500:CDS |
| GAAAATTGTGTATACATATG+TGG | 0.562177 | 8_2:+49446853 | None:intergenic |
| TGGCAAGTTTAGAGCAGTGA+AGG | 0.564530 | 8_2:-49447065 | Msa1252500:CDS |
| AAGGAGATGGTTTGATGAAG+GGG | 0.566540 | 8_2:-49448055 | Msa1252500:CDS |
| TCCACTTCATGAAAAGGAAG+TGG | 0.569024 | 8_2:+49447037 | None:intergenic |
| AAAAGTGACCAAACCGCCAC+CGG | 0.569526 | 8_2:+49453847 | None:intergenic |
| TTGGCCACTAAGAAAATGGC+CGG | 0.570631 | 8_2:+49451643 | None:intergenic |
| CTGTACTTTAGTTCCTTAGT+CGG | 0.573770 | 8_2:+49449044 | None:intergenic |
| TGAATCAAATGAAAATGAAG+AGG | 0.574589 | 8_2:-49451714 | Msa1252500:CDS |
| TCCTTATCACACAAAGGAAG+TGG | 0.575379 | 8_2:+49448701 | None:intergenic |
| ATATTTAGCATTTGATGTAG+GGG | 0.578910 | 8_2:-49446984 | Msa1252500:three_prime_UTR |
| CATGCAGAAAAGATGATCAA+AGG | 0.585159 | 8_2:-49451467 | Msa1252500:CDS |
| GCATACAAGTAATAGTAAGA+AGG | 0.587658 | 8_2:+49448756 | None:intergenic |
| TACAATGTCTATGACTGCTG+TGG | 0.588387 | 8_2:-49449003 | Msa1252500:CDS |
| TCTCCAATAATATGGCAGAA+AGG | 0.590845 | 8_2:+49448181 | None:intergenic |
| AATGGGAAGATGGTAAATTG+AGG | 0.594587 | 8_2:-49451673 | Msa1252500:CDS |
| GGTGAAGTTCATGGATGAAG+TGG | 0.595502 | 8_2:-49450295 | Msa1252500:CDS |
| AAGGAATTGAACTTGTGCAT+AGG | 0.598938 | 8_2:+49448935 | None:intergenic |
| CAAGGAGATGGTTTGATGAA+GGG | 0.600063 | 8_2:-49448056 | Msa1252500:CDS |
| ACTATATGCTTCTCCACTGA+GGG | 0.600576 | 8_2:+49453789 | None:intergenic |
| GACCGGTATATAATGTTGAA+GGG | 0.601265 | 8_2:+49448733 | None:intergenic |
| ATGTCTATGACTGCTGTGGT+TGG | 0.604592 | 8_2:-49448999 | Msa1252500:CDS |
| TGGCATGTTACTATATAACT+GGG | 0.604737 | 8_2:-49448274 | Msa1252500:CDS |
| ATGGCTGCAACATTATTGCA+TGG | 0.604892 | 8_2:-49449109 | Msa1252500:CDS |
| AGGGAATTTGGAAGATATGG+TGG | 0.609626 | 8_2:+49453808 | None:intergenic |
| GAACTCTTCTCACTATTCCA+AGG | 0.613505 | 8_2:-49453031 | Msa1252500:CDS |
| AAGACTATGGATACTGCATG+AGG | 0.618783 | 8_2:-49448238 | Msa1252500:CDS |
| TCACACAAAGGAAGTGGTAA+CGG | 0.620128 | 8_2:+49448707 | None:intergenic |
| GAATTTGGAAGATATGGTGG+TGG | 0.621088 | 8_2:+49453811 | None:intergenic |
| ACCGGTATATAATGTTGAAG+GGG | 0.629629 | 8_2:+49448734 | None:intergenic |
| TGCTTCGTGTTAATAAAACA+AGG | 0.630774 | 8_2:-49451496 | Msa1252500:CDS |
| GAAGTGATCATATCCGGTGG+CGG | 0.632061 | 8_2:-49453860 | Msa1252500:five_prime_UTR |
| TAATCATCAAATGAGTTCAG+TGG | 0.642708 | 8_2:-49453481 | Msa1252500:CDS |
| TCAAGAAAATGCAATCCAGA+AGG | 0.642722 | 8_2:-49451524 | Msa1252500:CDS |
| AGAAAATGCAATCCAGAAGG+TGG | 0.643834 | 8_2:-49451521 | Msa1252500:CDS |
| TAATAAATTCTATAGGACAA+AGG | 0.644773 | 8_2:-49453148 | Msa1252500:CDS |
| TACTATATGCTTCTCCACTG+AGG | 0.646438 | 8_2:+49453788 | None:intergenic |
| GCAGAAAAGATGATCAAAGG+TGG | 0.655712 | 8_2:-49451464 | Msa1252500:CDS |
| GTGGCCAAGGAAAGAATGTG+AGG | 0.657092 | 8_2:-49451628 | Msa1252500:CDS |
| TTATGTTCCTTATCACACAA+AGG | 0.659762 | 8_2:+49448695 | None:intergenic |
| TATCTTCCAAATTCCCTCAG+TGG | 0.667629 | 8_2:-49453802 | Msa1252500:five_prime_UTR |
| GAAGTTCATGGATGAAGTGG+AGG | 0.667764 | 8_2:-49450292 | Msa1252500:CDS |
| GATTCTGAAGAAATTTGACA+AGG | 0.671965 | 8_2:-49451088 | Msa1252500:intron |
| AGACTATGGATACTGCATGA+GGG | 0.676026 | 8_2:-49448237 | Msa1252500:CDS |
| CTCTTCTCACTATTCCAAGG+AGG | 0.702664 | 8_2:-49453028 | Msa1252500:CDS |
| ATATTTCAACAACTCAGACA+AGG | 0.704761 | 8_2:-49450914 | Msa1252500:intron |
| TAGGAGCAGAGAACAAACAG+AGG | 0.705511 | 8_2:-49451765 | Msa1252500:CDS |
| TGTGAAGTGATCATATCCGG+TGG | 0.747621 | 8_2:-49453863 | None:intergenic |
| GTGTTGAATGAAACACAAGA+TGG | 0.769647 | 8_2:+49453682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAAATAAATATTTTAT+TGG | - | chr8_2:49453568-49453587 | Msa1252500:CDS | 0.0% |
| !!! | CTTATGATATTTTTATTTTT+TGG | - | chr8_2:49447379-49447398 | Msa1252500:intron | 10.0% |
| !!! | TTTATTTTTTGGAATTTTAT+AGG | - | chr8_2:49447390-49447409 | Msa1252500:intron | 10.0% |
| !! | TAAGTTGTATTTATTTAAAT+AGG | - | chr8_2:49447966-49447985 | Msa1252500:CDS | 10.0% |
| !! | AAGTTGTATTTATTTAAATA+GGG | - | chr8_2:49447967-49447986 | Msa1252500:CDS | 10.0% |
| !! | ATTTGAAAATTATCATAAAA+AGG | - | chr8_2:49448092-49448111 | Msa1252500:intron | 10.0% |
| !!! | TCATTTTTTTATATAAATTG+TGG | + | chr8_2:49449644-49449663 | None:intergenic | 10.0% |
| !! | AGAATAAAAAATTACATAAA+GGG | + | chr8_2:49450752-49450771 | None:intergenic | 10.0% |
| !! | AAGAATAAAAAATTACATAA+AGG | + | chr8_2:49450753-49450772 | None:intergenic | 10.0% |
| !!! | AAAATGTTTGATTTTTTTAT+TGG | - | chr8_2:49451206-49451225 | Msa1252500:intron | 10.0% |
| !! | AAAAAAAAGTTTACTTGAAT+TGG | + | chr8_2:49447292-49447311 | None:intergenic | 15.0% |
| !! | ATAAGGTTAATAAATTCTAT+AGG | - | chr8_2:49447533-49447552 | Msa1252500:intron | 15.0% |
| !!! | CTATTTTATTAAACTATTAC+AGG | + | chr8_2:49448273-49448292 | None:intergenic | 15.0% |
| !! | AGAAAAAGTGAAAATAATAA+AGG | + | chr8_2:49450542-49450561 | None:intergenic | 15.0% |
| !!! | CTTCTTTTTTTAATAAGAAA+AGG | - | chr8_2:49450770-49450789 | Msa1252500:intron | 15.0% |
| !!! | TTCAAAATTATGTATTGTTT+TGG | - | chr8_2:49452091-49452110 | Msa1252500:intron | 15.0% |
| !!! | TCTTATTTATATAATCTGAA+AGG | + | chr8_2:49453302-49453321 | None:intergenic | 15.0% |
| !!! | ATGATTATTTGGTTTTTTGT+TGG | + | chr8_2:49447194-49447213 | None:intergenic | 20.0% |
| !! | AGAATTTATTAACCTTATTG+AGG | + | chr8_2:49447531-49447550 | None:intergenic | 20.0% |
| !! | TAATAAATTCTATAGGACAA+AGG | - | chr8_2:49447540-49447559 | Msa1252500:intron | 20.0% |
| !!! | AATATCCATTTGTTTTTTCA+AGG | + | chr8_2:49447593-49447612 | None:intergenic | 20.0% |
| !! | TATTTAAATAGGGTCTAAAA+TGG | - | chr8_2:49447977-49447996 | Msa1252500:CDS | 20.0% |
| !! | TAGACTATACAAAATGAATA+TGG | - | chr8_2:49448040-49448059 | Msa1252500:CDS | 20.0% |
| !! | AGACTATACAAAATGAATAT+GGG | - | chr8_2:49448041-49448060 | Msa1252500:CDS | 20.0% |
| !!! | TTTCTTGGTTAAATTTTACA+AGG | + | chr8_2:49448160-49448179 | None:intergenic | 20.0% |
| !!! | ATAAATCAATGGATTTGAAA+TGG | - | chr8_2:49448997-49449016 | Msa1252500:CDS | 20.0% |
| !!! | TAAATCAATGGATTTGAAAT+GGG | - | chr8_2:49448998-49449017 | Msa1252500:CDS | 20.0% |
| !! | TATAATCATTCAAATATCCT+AGG | + | chr8_2:49449271-49449290 | None:intergenic | 20.0% |
| !! | TAGGATATTTGAATGATTAT+AGG | - | chr8_2:49449270-49449289 | Msa1252500:intron | 20.0% |
| !! | AATGTTTAGTGAATATAACA+AGG | - | chr8_2:49449434-49449453 | Msa1252500:intron | 20.0% |
| !! | ACATGATTAATTATGTTCAA+TGG | + | chr8_2:49449480-49449499 | None:intergenic | 20.0% |
| !!! | CTTCATGATATTGATTTTTT+AGG | - | chr8_2:49449551-49449570 | Msa1252500:intron | 20.0% |
| !!! | AATGAAGTTTTTCATATTAG+AGG | - | chr8_2:49449659-49449678 | Msa1252500:intron | 20.0% |
| !! | CAAATATATTCTTTCATCAA+AGG | + | chr8_2:49449858-49449877 | None:intergenic | 20.0% |
| !! | CTTTGATGAAAGAATATATT+TGG | - | chr8_2:49449856-49449875 | Msa1252500:intron | 20.0% |
| !! | GACATGAATTATATGATTAT+TGG | + | chr8_2:49449966-49449985 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTGTATGATTCT+AGG | + | chr8_2:49450004-49450023 | None:intergenic | 20.0% |
| !! | AAATATTGGGAAAATAAAAG+AGG | + | chr8_2:49450051-49450070 | None:intergenic | 20.0% |
| !!! | GATTCTTTTTTATGATGAAT+TGG | + | chr8_2:49450481-49450500 | None:intergenic | 20.0% |
| !!! | TTTTAATAAGAAAAGGCAAT+TGG | - | chr8_2:49450777-49450796 | Msa1252500:intron | 20.0% |
| !! | ATACATTTCTAATAGTTTGA+TGG | - | chr8_2:49450979-49450998 | Msa1252500:intron | 20.0% |
| !! | TGAATTTGTAAAATAGCATA+TGG | + | chr8_2:49451062-49451081 | None:intergenic | 20.0% |
| !! | CAAGTTACTCATAAAATTAA+CGG | - | chr8_2:49451250-49451269 | Msa1252500:intron | 20.0% |
| !!! | AAATACTTTTAATGATCGAA+CGG | + | chr8_2:49452235-49452254 | None:intergenic | 20.0% |
| !! | TAGTTACATGATTTCTTTAT+AGG | - | chr8_2:49452364-49452383 | Msa1252500:intron | 20.0% |
| !! | TTGAAAATATGCTTAAAGAA+AGG | + | chr8_2:49452553-49452572 | None:intergenic | 20.0% |
| !!! | CATCTTATATTAAAGTTGAT+TGG | + | chr8_2:49453168-49453187 | None:intergenic | 20.0% |
| !! | TTACTTCTTTAATCTAGATT+AGG | + | chr8_2:49453261-49453280 | None:intergenic | 20.0% |
| !!! | AATATTATTTTTGCTTATGC+AGG | - | chr8_2:49453322-49453341 | Msa1252500:intron | 20.0% |
| !!! | AATATTTTATTGGTTCAGAT+TGG | - | chr8_2:49453578-49453597 | Msa1252500:CDS | 20.0% |
| !!! | AACTTGATTATTTTTTTCAG+TGG | - | chr8_2:49453795-49453814 | Msa1252500:five_prime_UTR | 20.0% |
| ! | AAATTCTCTAAGCAATTTGA+GGG | - | chr8_2:49447082-49447101 | Msa1252500:CDS | 25.0% |
| !!! | AAGAAGCTTTTGTTGATTAT+TGG | - | chr8_2:49447125-49447144 | Msa1252500:intron | 25.0% |
| !! | GAACTCATTTGATGATTATT+TGG | + | chr8_2:49447205-49447224 | None:intergenic | 25.0% |
| ! | AACTTTCTTAGTGATGAAAA+AGG | + | chr8_2:49447241-49447260 | None:intergenic | 25.0% |
| !! | TTGGAATTTTATAGGTTCAT+AGG | - | chr8_2:49447398-49447417 | Msa1252500:intron | 25.0% |
| !! | TATTAACCTTATTGAGGTTT+TGG | + | chr8_2:49447525-49447544 | None:intergenic | 25.0% |
| !! | TATAGAAATAGCTTGTAGAT+AGG | - | chr8_2:49447888-49447907 | Msa1252500:CDS | 25.0% |
| !!! | AGACAATGTTCTAAAGTTAT+AGG | + | chr8_2:49447931-49447950 | None:intergenic | 25.0% |
| !! | GGTTAAATTTTACAAGGAAA+GGG | + | chr8_2:49448154-49448173 | None:intergenic | 25.0% |
| !! | TGGTTAAATTTTACAAGGAA+AGG | + | chr8_2:49448155-49448174 | None:intergenic | 25.0% |
| !!! | TACTTGTCTTATTCTTTTCT+TGG | + | chr8_2:49448175-49448194 | None:intergenic | 25.0% |
| ! | CTAATACTCTGTATATATAC+TGG | - | chr8_2:49448881-49448900 | Msa1252500:intron | 25.0% |
| ! | TGAATCAAATGAAAATGAAG+AGG | - | chr8_2:49448974-49448993 | Msa1252500:CDS | 25.0% |
| ! | AAATGAAGAGGATAAATCAA+TGG | - | chr8_2:49448986-49449005 | Msa1252500:CDS | 25.0% |
| !! | AAGGTAACTAATTTCTGAAA+AGG | + | chr8_2:49449117-49449136 | None:intergenic | 25.0% |
| ! | AGAAATTAGTTACCTTGTAA+TGG | - | chr8_2:49449121-49449140 | Msa1252500:CDS | 25.0% |
| ! | GTTAATACTGTTTGAATATG+TGG | - | chr8_2:49449395-49449414 | Msa1252500:CDS | 25.0% |
| ! | AATAAATCATGTTGAGATGT+TGG | - | chr8_2:49449891-49449910 | Msa1252500:intron | 25.0% |
| ! | ATAATTCATGTCTTCACAAA+AGG | - | chr8_2:49449974-49449993 | Msa1252500:intron | 25.0% |
| ! | TTGTTTGTCCTAAAAATTAC+AGG | - | chr8_2:49450369-49450388 | Msa1252500:intron | 25.0% |
| !! | TTTGTCAAGAATTTTGCTAA+AGG | - | chr8_2:49450424-49450443 | Msa1252500:intron | 25.0% |
| !!! | TTTTATGATGAATTGGTCTA+AGG | + | chr8_2:49450474-49450493 | None:intergenic | 25.0% |
| ! | TCACAAAACAAACTAACTAA+AGG | + | chr8_2:49450603-49450622 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTTGTACATACA+AGG | + | chr8_2:49450675-49450694 | None:intergenic | 25.0% |
| ! | TTACAAGTGTTTAGAAAAGT+GGG | + | chr8_2:49450705-49450724 | None:intergenic | 25.0% |
| ! | TTTACAAGTGTTTAGAAAAG+TGG | + | chr8_2:49450706-49450725 | None:intergenic | 25.0% |
| ! | AAGAGAAAAAAAGTAACCAT+AGG | + | chr8_2:49450839-49450858 | None:intergenic | 25.0% |
| ! | AATTTGTCCATAAAAACTTC+TGG | - | chr8_2:49451112-49451131 | Msa1252500:CDS | 25.0% |
| !! | TTAAGTTCCAGAAGTTTTTA+TGG | + | chr8_2:49451122-49451141 | None:intergenic | 25.0% |
| !!! | TAAAAACTTCTGGAACTTAA+TGG | - | chr8_2:49451122-49451141 | Msa1252500:intron | 25.0% |
| !!! | ATTTTATGAGTAACTTGCTA+AGG | + | chr8_2:49451247-49451266 | None:intergenic | 25.0% |
| ! | GGAATCTTTCAAATAAATTC+AGG | - | chr8_2:49451271-49451290 | Msa1252500:intron | 25.0% |
| ! | ATAAATTCAGGACTATTTAC+TGG | - | chr8_2:49451283-49451302 | Msa1252500:intron | 25.0% |
| !!! | ATTTGGTGCATATGTTTTAA+TGG | - | chr8_2:49451321-49451340 | Msa1252500:intron | 25.0% |
| ! | ACTTAATTACCAGAAAAAGT+AGG | + | chr8_2:49451784-49451803 | None:intergenic | 25.0% |
| !! | ACTTGATTTTGTACATTTGA+TGG | - | chr8_2:49451827-49451846 | Msa1252500:intron | 25.0% |
| !! | ATCTTATTTATTGCATGTAC+AGG | - | chr8_2:49451909-49451928 | Msa1252500:intron | 25.0% |
| ! | AAAAAATGTACCTTGTAAAG+AGG | + | chr8_2:49452027-49452046 | None:intergenic | 25.0% |
| ! | TTCAAAAGTCATATACATGA+TGG | - | chr8_2:49452273-49452292 | Msa1252500:intron | 25.0% |
| ! | TATACATGATGGTTTATGAT+TGG | - | chr8_2:49452284-49452303 | Msa1252500:intron | 25.0% |
| !! | TATGAAAAAGATAGAAGTGT+TGG | - | chr8_2:49452724-49452743 | Msa1252500:intron | 25.0% |
| ! | AACTTTGTACCAATTGTATT+GGG | - | chr8_2:49452783-49452802 | Msa1252500:intron | 25.0% |
| ! | ATCAATTCATTTCTTAACCA+AGG | + | chr8_2:49452853-49452872 | None:intergenic | 25.0% |
| ! | ATCTATTTACTACTTGTCTA+TGG | - | chr8_2:49452885-49452904 | Msa1252500:intron | 25.0% |
| ! | TTGATTGGATACGATAATTA+GGG | + | chr8_2:49453153-49453172 | None:intergenic | 25.0% |
| ! | AGGTATTAAACATTACTCTA+AGG | - | chr8_2:49453342-49453361 | Msa1252500:intron | 25.0% |
| !! | CAACATTTTCAAAACTTGAA+TGG | + | chr8_2:49453391-49453410 | None:intergenic | 25.0% |
| ! | CATATTTAGCATTTGATGTA+GGG | - | chr8_2:49453703-49453722 | Msa1252500:five_prime_UTR | 25.0% |
| ! | ATATTTAGCATTTGATGTAG+GGG | - | chr8_2:49453704-49453723 | Msa1252500:five_prime_UTR | 25.0% |
| !!! | ATTTTTTTCAGTGGATTTGT+AGG | - | chr8_2:49453804-49453823 | Msa1252500:five_prime_UTR | 25.0% |
| ! | GAAAATTGTGTATACATATG+TGG | + | chr8_2:49453838-49453857 | None:intergenic | 25.0% |
| ! | TTGGAACAAAAAGTGAGTTT+TGG | + | chr8_2:49446977-49446996 | None:intergenic | 30.0% |
| !! | CACAAGATGGTGTTATATAT+TGG | + | chr8_2:49446996-49447015 | None:intergenic | 30.0% |
| ACAAGAACAAAGAGAGAAAA+TGG | - | chr8_2:49447057-49447076 | Msa1252500:CDS | 30.0% | |
| GAAATTCTCTAAGCAATTTG+AGG | - | chr8_2:49447081-49447100 | Msa1252500:CDS | 30.0% | |
| TGATTATTGGCAACTTAAGA+AGG | - | chr8_2:49447138-49447157 | Msa1252500:intron | 30.0% | |
| TAATCATCAAATGAGTTCAG+TGG | - | chr8_2:49447207-49447226 | Msa1252500:intron | 30.0% | |
| ! | AGTTTACTTGAATTGGTTCA+TGG | + | chr8_2:49447285-49447304 | None:intergenic | 30.0% |
| CTTGTTTCATCAACTAGTAA+AGG | - | chr8_2:49447424-49447443 | Msa1252500:intron | 30.0% | |
| TTTAGACCAAAACCTCAATA+AGG | - | chr8_2:49447516-49447535 | Msa1252500:intron | 30.0% | |
| AGAAAGAGTTTCTTGATAGA+GGG | - | chr8_2:49447563-49447582 | Msa1252500:intron | 30.0% | |
| TTCATGGATAAGAAAGGTAA+AGG | - | chr8_2:49447634-49447653 | Msa1252500:intron | 30.0% | |
| TCATGGATAAGAAAGGTAAA+GGG | - | chr8_2:49447635-49447654 | Msa1252500:intron | 30.0% | |
| TCATCCACATTCTCTATTAA+CGG | - | chr8_2:49447694-49447713 | Msa1252500:intron | 30.0% | |
| ATTACCGTTAATAGAGAATG+TGG | + | chr8_2:49447701-49447720 | None:intergenic | 30.0% | |
| ACCTTCAATATGAAGTTTCA+TGG | - | chr8_2:49448372-49448391 | Msa1252500:intron | 30.0% | |
| ACTGACACTTCATAATGAAT+GGG | + | chr8_2:49448784-49448803 | None:intergenic | 30.0% | |
| ! | ATTTCTGAAAAGGTTTGAGA+AGG | + | chr8_2:49449107-49449126 | None:intergenic | 30.0% |
| TGAACAAATCTTCCATTACA+AGG | + | chr8_2:49449136-49449155 | None:intergenic | 30.0% | |
| TGCTTCGTGTTAATAAAACA+AGG | - | chr8_2:49449192-49449211 | Msa1252500:intron | 30.0% | |
| ! | TGGTTTCATTGAGCTTTATA+AGG | - | chr8_2:49449244-49449263 | Msa1252500:intron | 30.0% |
| ! | GGTTTCATTGAGCTTTATAA+GGG | - | chr8_2:49449245-49449264 | Msa1252500:intron | 30.0% |
| GAATCTTTATAAATGCAAGC+AGG | + | chr8_2:49449585-49449604 | None:intergenic | 30.0% | |
| ! | GATTCTGAAGAAATTTGACA+AGG | - | chr8_2:49449600-49449619 | Msa1252500:intron | 30.0% |
| !! | TCAACTACTTTGAGATAGAT+TGG | + | chr8_2:49449748-49449767 | None:intergenic | 30.0% |
| ATATTTCAACAACTCAGACA+AGG | - | chr8_2:49449774-49449793 | Msa1252500:intron | 30.0% | |
| TTTGTCCTAAAAATTACAGG+TGG | - | chr8_2:49450372-49450391 | Msa1252500:intron | 30.0% | |
| CATGCAATTACTTTCTTCAT+TGG | - | chr8_2:49450502-49450521 | Msa1252500:intron | 30.0% | |
| AATCCAAAGAAAACACAACA+TGG | - | chr8_2:49450630-49450649 | Msa1252500:intron | 30.0% | |
| ! | ACATGATTAGTTATGATGTG+GGG | + | chr8_2:49450919-49450938 | None:intergenic | 30.0% |
| ! | CACATGATTAGTTATGATGT+GGG | + | chr8_2:49450920-49450939 | None:intergenic | 30.0% |
| ! | ACACATGATTAGTTATGATG+TGG | + | chr8_2:49450921-49450940 | None:intergenic | 30.0% |
| TAAGTGACTTAGAAGTTGTT+AGG | - | chr8_2:49450946-49450965 | Msa1252500:CDS | 30.0% | |
| AAGTGACTTAGAAGTTGTTA+GGG | - | chr8_2:49450947-49450966 | Msa1252500:CDS | 30.0% | |
| ! | CATGAGTTTTTATCAGAAGT+CGG | + | chr8_2:49451178-49451197 | None:intergenic | 30.0% |
| ! | ACTATTTACTGGATGCTTTT+GGG | - | chr8_2:49451294-49451313 | Msa1252500:intron | 30.0% |
| ACATCAAAATTCACTCTACA+TGG | - | chr8_2:49451369-49451388 | Msa1252500:intron | 30.0% | |
| !! | GTTCTAAAAACACTGATACA+AGG | + | chr8_2:49451450-49451469 | None:intergenic | 30.0% |
| !!! | TGTATCAGTGTTTTTAGAAC+CGG | - | chr8_2:49451450-49451469 | Msa1252500:CDS | 30.0% |
| TTTCTACATTTCTTCCTCTA+TGG | - | chr8_2:49451560-49451579 | Msa1252500:CDS | 30.0% | |
| ATTTGACTCTACTCACAAAA+GGG | - | chr8_2:49451726-49451745 | Msa1252500:CDS | 30.0% | |
| GCATACAAGTAATAGTAAGA+AGG | + | chr8_2:49451935-49451954 | None:intergenic | 30.0% | |
| TTATGTTCCTTATCACACAA+AGG | + | chr8_2:49451996-49452015 | None:intergenic | 30.0% | |
| GTGTGATAAGGAACATAATT+TGG | - | chr8_2:49451998-49452017 | Msa1252500:intron | 30.0% | |
| !!! | CAGGTAGGATTTTTTTTTCA+TGG | - | chr8_2:49452188-49452207 | Msa1252500:intron | 30.0% |
| ATGGCATGTTACTATATAAC+TGG | - | chr8_2:49452413-49452432 | Msa1252500:intron | 30.0% | |
| TGGCATGTTACTATATAACT+GGG | - | chr8_2:49452414-49452433 | Msa1252500:intron | 30.0% | |
| !!! | ATTTTGATTTCTAGTGTGCA+AGG | - | chr8_2:49452614-49452633 | Msa1252500:intron | 30.0% |
| ACAAATCACCTTATCAATCT+AGG | - | chr8_2:49452658-49452677 | Msa1252500:intron | 30.0% | |
| CATATTTGCCTAGATTGATA+AGG | + | chr8_2:49452669-49452688 | None:intergenic | 30.0% | |
| !! | AAAAAGATAGAAGTGTTGGA+TGG | - | chr8_2:49452728-49452747 | Msa1252500:intron | 30.0% |
| CAACTTTGTACCAATTGTAT+TGG | - | chr8_2:49452782-49452801 | Msa1252500:intron | 30.0% | |
| TTACAAAGTCCCAATACAAT+TGG | + | chr8_2:49452795-49452814 | None:intergenic | 30.0% | |
| AATTGTATTGGGACTTTGTA+AGG | - | chr8_2:49452794-49452813 | Msa1252500:intron | 30.0% | |
| ATTGTATTGGGACTTTGTAA+GGG | - | chr8_2:49452795-49452814 | Msa1252500:intron | 30.0% | |
| ATTTCTTAACCAAGGATTCT+TGG | + | chr8_2:49452845-49452864 | None:intergenic | 30.0% | |
| ! | AATCTTTAGAGAGAGCAAAA+GGG | + | chr8_2:49452926-49452945 | None:intergenic | 30.0% |
| ! | TAATCTTTAGAGAGAGCAAA+AGG | + | chr8_2:49452927-49452946 | None:intergenic | 30.0% |
| GTTGATTGGATACGATAATT+AGG | + | chr8_2:49453154-49453173 | None:intergenic | 30.0% | |
| AGATAAAATGTCACAAAGTG+TGG | - | chr8_2:49453192-49453211 | Msa1252500:CDS | 30.0% | |
| AAGTTATTAGAAGAGGACTA+TGG | - | chr8_2:49453447-49453466 | Msa1252500:CDS | 30.0% | |
| AGAAGACTAATAATGCCAAT+TGG | - | chr8_2:49453680-49453699 | Msa1252500:five_prime_UTR | 30.0% | |
| CAAATGCTAAATATGCCAAT+TGG | + | chr8_2:49453698-49453717 | None:intergenic | 30.0% | |
| GCATATTTAGCATTTGATGT+AGG | - | chr8_2:49453702-49453721 | Msa1252500:five_prime_UTR | 30.0% | |
| TGTTTACATCAACTTGAATG+AGG | + | chr8_2:49453769-49453788 | None:intergenic | 30.0% | |
| GTGTTGAATGAAACACAAGA+TGG | + | chr8_2:49447009-49447028 | None:intergenic | 35.0% | |
| ACAAAAGCTTCTTTCCATTC+TGG | + | chr8_2:49447118-49447137 | None:intergenic | 35.0% | |
| GAGAAAGAGTTTCTTGATAG+AGG | - | chr8_2:49447562-49447581 | Msa1252500:intron | 35.0% | |
| GAAAGAGTTTCTTGATAGAG+GGG | - | chr8_2:49447564-49447583 | Msa1252500:intron | 35.0% | |
| GGAGTCCTTGAAAAAACAAA+TGG | - | chr8_2:49447585-49447604 | Msa1252500:intron | 35.0% | |
| TCTGCATTCATGGATAAGAA+AGG | - | chr8_2:49447628-49447647 | Msa1252500:intron | 35.0% | |
| GCTTGTAGATAGGTACATAT+AGG | - | chr8_2:49447898-49447917 | Msa1252500:CDS | 35.0% | |
| ! | AAATAGGGTCTAAAATGGTG+TGG | - | chr8_2:49447982-49448001 | Msa1252500:CDS | 35.0% |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_2:49448376-49448395 | None:intergenic | 35.0% | |
| TTGAACGTAACAACATGTGT+TGG | - | chr8_2:49448446-49448465 | Msa1252500:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | - | chr8_2:49448508-49448527 | Msa1252500:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_2:49448376-49448395 | None:intergenic | 35.0% | |
| TGTTAGACACTGAAACATGT+TGG | - | chr8_2:49448610-49448629 | Msa1252500:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | - | chr8_2:49448508-49448527 | Msa1252500:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_2:49448376-49448395 | None:intergenic | 35.0% | |
| CACTGACACTTCATAATGAA+TGG | + | chr8_2:49448785-49448804 | None:intergenic | 35.0% | |
| TGTATATATACTGGATGCAG+AGG | - | chr8_2:49448890-49448909 | Msa1252500:intron | 35.0% | |
| ! | ATGGATTTGAAATGGGAAGA+TGG | - | chr8_2:49449005-49449024 | Msa1252500:CDS | 35.0% |
| AATGGGAAGATGGTAAATTG+AGG | - | chr8_2:49449015-49449034 | Msa1252500:CDS | 35.0% | |
| GGTAAATTGAGGACATTATC+CGG | - | chr8_2:49449026-49449045 | Msa1252500:CDS | 35.0% | |
| TTATCCTCACATTCTTTCCT+TGG | + | chr8_2:49449067-49449086 | None:intergenic | 35.0% | |
| TCAAGAAAATGCAATCCAGA+AGG | - | chr8_2:49449164-49449183 | Msa1252500:intron | 35.0% | |
| CATGCAGAAAAGATGATCAA+AGG | - | chr8_2:49449221-49449240 | Msa1252500:intron | 35.0% | |
| CTTATGATTTCTTCTCCTTC+AGG | - | chr8_2:49449702-49449721 | Msa1252500:intron | 35.0% | |
| GTGTTACCAACAATATCAAG+TGG | - | chr8_2:49449940-49449959 | Msa1252500:intron | 35.0% | |
| TATTGGCCACTTGATATTGT+TGG | + | chr8_2:49449949-49449968 | None:intergenic | 35.0% | |
| TTCATGTCTTCACAAAAGGA+TGG | - | chr8_2:49449978-49449997 | Msa1252500:intron | 35.0% | |
| ! | CTTCACCACCTGTAATTTTT+AGG | + | chr8_2:49450380-49450399 | None:intergenic | 35.0% |
| TGCTAAAGGTGATCATAGAA+AGG | - | chr8_2:49450438-49450457 | Msa1252500:intron | 35.0% | |
| AAGGGTTATGCAAATATGCA+TGG | + | chr8_2:49450734-49450753 | None:intergenic | 35.0% | |
| ! | GACTATTTACTGGATGCTTT+TGG | - | chr8_2:49451293-49451312 | Msa1252500:intron | 35.0% |
| !! | GTTTTAATGGCTCATCTTAC+TGG | - | chr8_2:49451334-49451353 | Msa1252500:intron | 35.0% |
| ! | TCTTTTACTTACCTAAGCAC+AGG | + | chr8_2:49451406-49451425 | None:intergenic | 35.0% |
| ! | CTGTACTTTAGTTCCTTAGT+CGG | + | chr8_2:49451647-49451666 | None:intergenic | 35.0% |
| CATTTGACTCTACTCACAAA+AGG | - | chr8_2:49451725-49451744 | Msa1252500:CDS | 35.0% | |
| AAGGAATTGAACTTGTGCAT+AGG | + | chr8_2:49451756-49451775 | None:intergenic | 35.0% | |
| ACCGGTATATAATGTTGAAG+GGG | + | chr8_2:49451957-49451976 | None:intergenic | 35.0% | |
| GACCGGTATATAATGTTGAA+GGG | + | chr8_2:49451958-49451977 | None:intergenic | 35.0% | |
| TGACCGGTATATAATGTTGA+AGG | + | chr8_2:49451959-49451978 | None:intergenic | 35.0% | |
| AATTTGGTCACCTCTTTACA+AGG | - | chr8_2:49452014-49452033 | Msa1252500:intron | 35.0% | |
| ! | ATTGAATTCTGTTTCTCCCT+AGG | - | chr8_2:49452124-49452143 | Msa1252500:intron | 35.0% |
| !!! | TCTGATGCTGGACTTTTTTA+TGG | - | chr8_2:49452148-49452167 | Msa1252500:intron | 35.0% |
| CTTTATAGGTTCCAATGCTA+AGG | - | chr8_2:49452378-49452397 | Msa1252500:intron | 35.0% | |
| AGTAACATGCCATAAACTCT+AGG | + | chr8_2:49452406-49452425 | None:intergenic | 35.0% | |
| AGCTATAAGACTCAAGACTA+TGG | - | chr8_2:49452437-49452456 | Msa1252500:intron | 35.0% | |
| TGTCCTTTCTGCCATATTAT+TGG | - | chr8_2:49452504-49452523 | Msa1252500:intron | 35.0% | |
| TCTCCAATAATATGGCAGAA+AGG | + | chr8_2:49452510-49452529 | None:intergenic | 35.0% | |
| TGCATTGCTCTCCAATAATA+TGG | + | chr8_2:49452518-49452537 | None:intergenic | 35.0% | |
| ATATTATTGGAGAGCAATGC+AGG | - | chr8_2:49452517-49452536 | Msa1252500:intron | 35.0% | |
| ACATCTTCAATCAGAAGAGT+CGG | + | chr8_2:49452970-49452989 | None:intergenic | 35.0% | |
| TGTTCGATACATGTTGGTAT+TGG | - | chr8_2:49452996-49453015 | Msa1252500:CDS | 35.0% | |
| GCACTTGAAGTTATTAGAAG+AGG | - | chr8_2:49453440-49453459 | Msa1252500:CDS | 35.0% | |
| CATGAGCATCTAAATAATGC+TGG | - | chr8_2:49453603-49453622 | Msa1252500:CDS | 35.0% | |
| ATCTGCTCCTTCAAGTATTT+GGG | + | chr8_2:49453739-49453758 | None:intergenic | 35.0% | |
| AATCTGCTCCTTCAAGTATT+TGG | + | chr8_2:49453740-49453759 | None:intergenic | 35.0% | |
| GAATTTGGAAGATATGGTGG+TGG | + | chr8_2:49446880-49446899 | None:intergenic | 40.0% | |
| AGGGAATTTGGAAGATATGG+TGG | + | chr8_2:49446883-49446902 | None:intergenic | 40.0% | |
| CTGAGGGAATTTGGAAGATA+TGG | + | chr8_2:49446886-49446905 | None:intergenic | 40.0% | |
| TATCTTCCAAATTCCCTCAG+TGG | - | chr8_2:49446886-49446905 | Msa1252500:three_prime_UTR | 40.0% | |
| ACTATATGCTTCTCCACTGA+GGG | + | chr8_2:49446902-49446921 | None:intergenic | 40.0% | |
| TACTATATGCTTCTCCACTG+AGG | + | chr8_2:49446903-49446922 | None:intergenic | 40.0% | |
| !!! | GTGAGTTTTGGTTGATATGC+TGG | + | chr8_2:49446965-49446984 | None:intergenic | 40.0% |
| TAGCATCAGTGTCAGCAAAT+TGG | + | chr8_2:49447477-49447496 | None:intergenic | 40.0% | |
| TGAGCTCAAATCTGCATTCA+TGG | - | chr8_2:49447618-49447637 | Msa1252500:intron | 40.0% | |
| GAACTCTTCTCACTATTCCA+AGG | - | chr8_2:49447657-49447676 | Msa1252500:intron | 40.0% | |
| GTCATTGTCAATCTTGTGGT+TGG | + | chr8_2:49448241-49448260 | None:intergenic | 40.0% | |
| ! | ACGTGTCATTGTCAATCTTG+TGG | + | chr8_2:49448245-49448264 | None:intergenic | 40.0% |
| GTGTTAGTGTTGTGTTGTGT+CGG | - | chr8_2:49448321-49448340 | Msa1252500:intron | 40.0% | |
| TGTTAGACACTGACACATGT+TGG | - | chr8_2:49448474-49448493 | Msa1252500:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+CGG | + | chr8_2:49448503-49448522 | None:intergenic | 40.0% |
| TTGAACGTGACAACATGTGT+TGG | - | chr8_2:49448582-49448601 | Msa1252500:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+TGG | + | chr8_2:49448503-49448522 | None:intergenic | 40.0% |
| TGTCAGACACTAACACATGT+TGG | - | chr8_2:49448746-49448765 | Msa1252500:CDS | 40.0% | |
| CAGAGAACAAACAGAGGATT+TGG | - | chr8_2:49448929-49448948 | Msa1252500:CDS | 40.0% | |
| !! | TTATCCGGCCATTTTCTTAG+TGG | - | chr8_2:49449041-49449060 | Msa1252500:CDS | 40.0% |
| TTCCTTGGCCACTAAGAAAA+TGG | + | chr8_2:49449052-49449071 | None:intergenic | 40.0% | |
| !! | GTTTGAGAAGGTGTTGTCAA+AGG | + | chr8_2:49449095-49449114 | None:intergenic | 40.0% |
| AGAAAATGCAATCCAGAAGG+TGG | - | chr8_2:49449167-49449186 | Msa1252500:intron | 40.0% | |
| GCAGAAAAGATGATCAAAGG+TGG | - | chr8_2:49449224-49449243 | Msa1252500:intron | 40.0% | |
| ! | ATTGAGCTTTATAAGGGCCT+AGG | - | chr8_2:49449251-49449270 | Msa1252500:intron | 40.0% |
| !! | TTTGCTTTTCTGTGACCTGA+AGG | + | chr8_2:49449720-49449739 | None:intergenic | 40.0% |
| GAGTTGCAAAGGATAACTAG+TGG | + | chr8_2:49449917-49449936 | None:intergenic | 40.0% | |
| !! | GGTAACACTTTGAGTTGCAA+AGG | + | chr8_2:49449928-49449947 | None:intergenic | 40.0% |
| ATTACAGGTGGTGAAGTTCA+TGG | - | chr8_2:49450384-49450403 | Msa1252500:intron | 40.0% | |
| ! | GGTCCATGTTGTGTTTTCTT+TGG | + | chr8_2:49450636-49450655 | None:intergenic | 40.0% |
| TACAAGGAGCTAGTGACTAA+GGG | + | chr8_2:49450659-49450678 | None:intergenic | 40.0% | |
| ATACAAGGAGCTAGTGACTA+AGG | + | chr8_2:49450660-49450679 | None:intergenic | 40.0% | |
| AAAAGGCAATTGGCACATCA+TGG | - | chr8_2:49450787-49450806 | Msa1252500:intron | 40.0% | |
| AAACTGTCTATCCTGTGCTT+AGG | - | chr8_2:49451392-49451411 | Msa1252500:intron | 40.0% | |
| CAATAATGTTGCAGCCATAG+AGG | + | chr8_2:49451577-49451596 | None:intergenic | 40.0% | |
| ATGGCTGCAACATTATTGCA+TGG | - | chr8_2:49451579-49451598 | Msa1252500:CDS | 40.0% | |
| TTTCGAGATAGTTCCGACTA+AGG | - | chr8_2:49451631-49451650 | Msa1252500:CDS | 40.0% | |
| TACAATGTCTATGACTGCTG+TGG | - | chr8_2:49451685-49451704 | Msa1252500:CDS | 40.0% | |
| GCACAAGTTCAATTCCTTCT+TGG | - | chr8_2:49451758-49451777 | Msa1252500:CDS | 40.0% | |
| GCCCCTTCAACATTATATAC+CGG | - | chr8_2:49451953-49451972 | Msa1252500:intron | 40.0% | |
| TCACACAAAGGAAGTGGTAA+CGG | + | chr8_2:49451984-49452003 | None:intergenic | 40.0% | |
| ACCACTTCCTTTGTGTGATA+AGG | - | chr8_2:49451986-49452005 | Msa1252500:intron | 40.0% | |
| TCCTTATCACACAAAGGAAG+TGG | + | chr8_2:49451990-49452009 | None:intergenic | 40.0% | |
| AAGACTATGGATACTGCATG+AGG | - | chr8_2:49452450-49452469 | Msa1252500:intron | 40.0% | |
| AGACTATGGATACTGCATGA+GGG | - | chr8_2:49452451-49452470 | Msa1252500:intron | 40.0% | |
| !! | ATTTCTAGTGTGCAAGGAGA+TGG | - | chr8_2:49452620-49452639 | Msa1252500:intron | 40.0% |
| CAAGGAGATGGTTTGATGAA+GGG | - | chr8_2:49452632-49452651 | Msa1252500:intron | 40.0% | |
| AAGGAGATGGTTTGATGAAG+GGG | - | chr8_2:49452633-49452652 | Msa1252500:intron | 40.0% | |
| ATTGGGACTTTGTAAGGGAT+TGG | - | chr8_2:49452800-49452819 | Msa1252500:intron | 40.0% | |
| TTGGGACTTTGTAAGGGATT+GGG | - | chr8_2:49452801-49452820 | Msa1252500:intron | 40.0% | |
| AAAGGAACTCCAAGAATCCT+TGG | - | chr8_2:49452833-49452852 | Msa1252500:intron | 40.0% | |
| CTTCTGATTGAAGATGTGTC+TGG | - | chr8_2:49452973-49452992 | Msa1252500:intron | 40.0% | |
| TTATCTACGAGACATTGACG+TGG | + | chr8_2:49453122-49453141 | None:intergenic | 40.0% | |
| ACGTCAATGTCTCGTAGATA+AGG | - | chr8_2:49453121-49453140 | Msa1252500:CDS | 40.0% | |
| !! | ACATTACTCTAAGGCTTGCT+TGG | - | chr8_2:49453351-49453370 | Msa1252500:intron | 40.0% |
| GAGGACTATGGAATTTCTAC+AGG | - | chr8_2:49453459-49453478 | Msa1252500:CDS | 40.0% | |
| TCCACTTCATGAAAAGGAAG+TGG | + | chr8_2:49453654-49453673 | None:intergenic | 40.0% | |
| ! | ACTTCCTTTTCATGAAGTGG+AGG | - | chr8_2:49453653-49453672 | Msa1252500:five_prime_UTR | 40.0% |
| TCATCCTCCACTTCATGAAA+AGG | + | chr8_2:49453660-49453679 | None:intergenic | 40.0% | |
| GATTCCACCCAAATACTTGA+AGG | - | chr8_2:49453729-49453748 | Msa1252500:five_prime_UTR | 40.0% | |
| AGGGACAACTCATTCCAGAA+TGG | - | chr8_2:49447101-49447120 | Msa1252500:intron | 45.0% | |
| CTCTTCTCACTATTCCAAGG+AGG | - | chr8_2:49447660-49447679 | Msa1252500:intron | 45.0% | |
| TTCTCACTATTCCAAGGAGG+AGG | - | chr8_2:49447663-49447682 | Msa1252500:intron | 45.0% | |
| ! | GGGTCTAAAATGGTGTGGTT+TGG | - | chr8_2:49447987-49448006 | Msa1252500:CDS | 45.0% |
| ! | TGGTGTGGTTTGGAGAGAAA+TGG | - | chr8_2:49447997-49448016 | Msa1252500:CDS | 45.0% |
| ATGCAGAGGAAGACTCTGTT+AGG | - | chr8_2:49448904-49448923 | Msa1252500:intron | 45.0% | |
| TAGGAGCAGAGAACAAACAG+AGG | - | chr8_2:49448923-49448942 | Msa1252500:CDS | 45.0% | |
| TTGGCCACTAAGAAAATGGC+CGG | + | chr8_2:49449048-49449067 | None:intergenic | 45.0% | |
| CTACACCATCGCTCAATCTT+AGG | + | chr8_2:49450252-49450271 | None:intergenic | 45.0% | |
| GGTGAAGTTCATGGATGAAG+TGG | - | chr8_2:49450393-49450412 | Msa1252500:intron | 45.0% | |
| GAAGTTCATGGATGAAGTGG+AGG | - | chr8_2:49450396-49450415 | Msa1252500:intron | 45.0% | |
| ACAAGGAGCTAGTGACTAAG+GGG | + | chr8_2:49450658-49450677 | None:intergenic | 45.0% | |
| ! | GGATGCTTTTGGGCACTATT+TGG | - | chr8_2:49451304-49451323 | Msa1252500:intron | 45.0% |
| ATGTCTATGACTGCTGTGGT+TGG | - | chr8_2:49451689-49451708 | Msa1252500:CDS | 45.0% | |
| CCAGAAAAAGTAGGCCAAGA+AGG | + | chr8_2:49451775-49451794 | None:intergenic | 45.0% | |
| !!! | CCTTCTTGGCCTACTTTTTC+TGG | - | chr8_2:49451772-49451791 | Msa1252500:CDS | 45.0% |
| AAGTCCAGCATCAGAACCTA+GGG | + | chr8_2:49452143-49452162 | None:intergenic | 45.0% | |
| AAAGTCCAGCATCAGAACCT+AGG | + | chr8_2:49452144-49452163 | None:intergenic | 45.0% | |
| GATCAACTTTGCAGTCAGGT+AGG | - | chr8_2:49452173-49452192 | Msa1252500:intron | 45.0% | |
| AACTCTAGGCTCCTTAGCAT+TGG | + | chr8_2:49452392-49452411 | None:intergenic | 45.0% | |
| GCTAAGGAGCCTAGAGTTTA+TGG | - | chr8_2:49452394-49452413 | Msa1252500:intron | 45.0% | |
| GCAAGGAGATGGTTTGATGA+AGG | - | chr8_2:49452631-49452650 | Msa1252500:intron | 45.0% | |
| GTTTCAGCTATGTTAGCTGC+AGG | - | chr8_2:49452688-49452707 | Msa1252500:intron | 45.0% | |
| TGGGACTTTGTAAGGGATTG+GGG | - | chr8_2:49452802-49452821 | Msa1252500:intron | 45.0% | |
| GTCTGGTGTTCGATACATGT+TGG | - | chr8_2:49452990-49453009 | Msa1252500:intron | 45.0% | |
| ! | TGGCAAGTTTAGAGCAGTGA+AGG | - | chr8_2:49453623-49453642 | Msa1252500:exon | 45.0% |
| ! | GCCACTTCCTTTTCATGAAG+TGG | - | chr8_2:49453650-49453669 | Msa1252500:five_prime_UTR | 45.0% |
| TGCTCCTTCAAGTATTTGGG+TGG | + | chr8_2:49453736-49453755 | None:intergenic | 45.0% | |
| !!! | ATAAATTTTGTTAAAATATT+GGG | + | chr8_2:49450064-49450083 | None:intergenic | 5.0% |
| !!! | TATAAATTTTGTTAAAATAT+TGG | + | chr8_2:49450065-49450084 | None:intergenic | 5.0% |
| !! | TATATATATATATATATGAT+TGG | + | chr8_2:49450150-49450169 | None:intergenic | 5.0% |
| AAAAGTGACCAAACCGCCAC+CGG | + | chr8_2:49446844-49446863 | None:intergenic | 50.0% | |
| GCTTCTCCACTGAGGGAATT+TGG | + | chr8_2:49446895-49446914 | None:intergenic | 50.0% | |
| TGAGACAGATTCCTCCTCCT+TGG | + | chr8_2:49447677-49447696 | None:intergenic | 50.0% | |
| TGTCGGACACTGACACATGT+TGG | - | chr8_2:49448338-49448357 | Msa1252500:intron | 50.0% | |
| !! | GGCCATTTTCTTAGTGGCCA+AGG | - | chr8_2:49449047-49449066 | Msa1252500:CDS | 50.0% |
| GTGGCCAAGGAAAGAATGTG+AGG | - | chr8_2:49449060-49449079 | Msa1252500:CDS | 50.0% | |
| TGACGCCTAAGATTGAGCGA+TGG | - | chr8_2:49450244-49450263 | Msa1252500:CDS | 50.0% | |
| CAAGGAGCTAGTGACTAAGG+GGG | + | chr8_2:49450657-49450676 | None:intergenic | 50.0% | |
| !!! | GTTTTTAGAACCGGACCAGC+TGG | - | chr8_2:49451459-49451478 | Msa1252500:CDS | 50.0% |
| TGCTCGTACAACTTCGATCG+TGG | + | chr8_2:49451490-49451509 | None:intergenic | 50.0% | |
| ACGATCGAAGTTGTACGAGC+AGG | - | chr8_2:49451489-49451508 | Msa1252500:CDS | 50.0% | |
| ! | TTCTCCCTAGGTTCTGATGC+TGG | - | chr8_2:49452136-49452155 | Msa1252500:intron | 50.0% |
| GGCTGATCAACTTTGCAGTC+AGG | - | chr8_2:49452169-49452188 | Msa1252500:intron | 50.0% | |
| ! | GGGATTGGGGTTTGCTTCAA+AGG | - | chr8_2:49452815-49452834 | Msa1252500:intron | 50.0% |
| TTGACGTGGATACAGACACC+AGG | + | chr8_2:49453108-49453127 | None:intergenic | 50.0% | |
| ! | GATCATATCCGGTGGCGGTT+TGG | - | chr8_2:49446833-49446852 | Msa1252500:three_prime_UTR | 55.0% |
| ACACGAAGCACACCACCTTC+TGG | + | chr8_2:49449182-49449201 | None:intergenic | 55.0% | |
| TCGATCGTGGTTGAACCAGC+TGG | + | chr8_2:49451477-49451496 | None:intergenic | 55.0% | |
| !! | GGAAGTGGTAACGGCTTGAC+CGG | + | chr8_2:49451975-49451994 | None:intergenic | 55.0% |
| CAGGCACGACACAGACATGT+AGG | + | chr8_2:49453089-49453108 | None:intergenic | 55.0% | |
| CTACATGTCTGTGTCGTGCC+TGG | - | chr8_2:49453087-49453106 | Msa1252500:CDS | 55.0% | |
| CGTGGTTGAACCAGCTGGTC+CGG | + | chr8_2:49451472-49451491 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 49446831 | 49453879 | 49446831 | ID=Msa1252500;Name=Msa1252500 |
| chr8_2 | mRNA | 49446831 | 49453879 | 49446831 | ID=Msa1252500-mRNA-1;Parent=Msa1252500;Name=Msa1252500-mRNA-1;_AED=0.09;_eAED=0.09;_QI=245|1|1|1|1|1|14|190|781 |
| chr8_2 | exon | 49446831 | 49447114 | 49446831 | ID=Msa1252500-mRNA-1:exon:15000;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49447230 | 49447366 | 49447230 | ID=Msa1252500-mRNA-1:exon:14999;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49447804 | 49448082 | 49447804 | ID=Msa1252500-mRNA-1:exon:14998;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49448172 | 49448324 | 49448172 | ID=Msa1252500-mRNA-1:exon:14997;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49448520 | 49448564 | 49448520 | ID=Msa1252500-mRNA-1:exon:14996;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49448675 | 49448779 | 49448675 | ID=Msa1252500-mRNA-1:exon:14995;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49448917 | 49449166 | 49448917 | ID=Msa1252500-mRNA-1:exon:14994;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49449297 | 49449417 | 49449297 | ID=Msa1252500-mRNA-1:exon:14993;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49450187 | 49450319 | 49450187 | ID=Msa1252500-mRNA-1:exon:14992;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49450915 | 49450986 | 49450915 | ID=Msa1252500-mRNA-1:exon:14991;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49451089 | 49451137 | 49451089 | ID=Msa1252500-mRNA-1:exon:14990;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49451419 | 49451800 | 49451419 | ID=Msa1252500-mRNA-1:exon:14989;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49452995 | 49453298 | 49452995 | ID=Msa1252500-mRNA-1:exon:14988;Parent=Msa1252500-mRNA-1 |
| chr8_2 | exon | 49453413 | 49453879 | 49453413 | ID=Msa1252500-mRNA-1:exon:14987;Parent=Msa1252500-mRNA-1 |
| chr8_2 | five_prime_UTR | 49453635 | 49453879 | 49453635 | ID=Msa1252500-mRNA-1:five_prime_utr;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49453413 | 49453634 | 49453413 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49452995 | 49453298 | 49452995 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49451419 | 49451800 | 49451419 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49451089 | 49451137 | 49451089 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49450915 | 49450986 | 49450915 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49450187 | 49450319 | 49450187 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49449297 | 49449417 | 49449297 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49448917 | 49449166 | 49448917 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49448675 | 49448779 | 49448675 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49448520 | 49448564 | 49448520 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49448172 | 49448324 | 49448172 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49447804 | 49448082 | 49447804 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49447230 | 49447366 | 49447230 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | CDS | 49447021 | 49447114 | 49447021 | ID=Msa1252500-mRNA-1:cds;Parent=Msa1252500-mRNA-1 |
| chr8_2 | three_prime_UTR | 49446831 | 49447020 | 49446831 | ID=Msa1252500-mRNA-1:three_prime_utr;Parent=Msa1252500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
