Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198970 | sp|Q93ZF5|PHO11_ARATH | 68.096 | 793 | 232 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198970 | A0A072TSP3 | 99.232 | 781 | 6 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1198970 | Msa1252500 | 0.954424 | 3.050720e-112 | -8.615850e-47 |
| Msa1198970 | Msa1426230 | 0.825089 | 5.667762e-54 | -8.615850e-47 |
| Msa0853200 | Msa1198970 | -0.804333 | 2.271246e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198970 | MtrunA17_Chr8g0368741 | 99.232 | 781 | 6 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1613 |
| Msa1198970 | MtrunA17_Chr1g0187381 | 47.421 | 795 | 378 | 9 | 1 | 779 | 54 | 824 | 0.0 | 730 |
| Msa1198970 | MtrunA17_Chr1g0166651 | 45.949 | 790 | 398 | 7 | 1 | 779 | 1 | 772 | 0.0 | 697 |
| Msa1198970 | MtrunA17_Chr5g0417841 | 34.131 | 794 | 461 | 16 | 4 | 779 | 3 | 752 | 1.58e-145 | 445 |
| Msa1198970 | MtrunA17_Chr2g0302531 | 34.988 | 826 | 460 | 25 | 2 | 781 | 1 | 795 | 2.29e-145 | 446 |
| Msa1198970 | MtrunA17_Chr7g0217801 | 35.872 | 814 | 453 | 22 | 2 | 781 | 1 | 779 | 1.14e-143 | 441 |
| Msa1198970 | MtrunA17_Chr7g0217771 | 41.429 | 350 | 195 | 7 | 439 | 781 | 3 | 349 | 9.02e-85 | 273 |
| Msa1198970 | MtrunA17_Chr7g0217821 | 39.255 | 349 | 204 | 5 | 439 | 781 | 3 | 349 | 1.12e-77 | 254 |
| Msa1198970 | MtrunA17_Chr7g0217831 | 31.436 | 404 | 233 | 13 | 2 | 388 | 1 | 377 | 8.89e-39 | 148 |
| Msa1198970 | MtrunA17_Chr2g0322931 | 30.357 | 336 | 213 | 11 | 432 | 755 | 111 | 437 | 7.81e-25 | 108 |
| Msa1198970 | MtrunA17_Chr7g0217781 | 38.217 | 157 | 82 | 3 | 232 | 388 | 46 | 187 | 3.45e-22 | 95.1 |
| Msa1198970 | MtrunA17_Chr7g0246941 | 28.657 | 335 | 220 | 12 | 432 | 755 | 76 | 402 | 1.18e-20 | 95.5 |
| Msa1198970 | MtrunA17_Chr7g0217791 | 31.915 | 188 | 113 | 6 | 2 | 179 | 1 | 183 | 3.82e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198970 | AT1G68740.1 | 68.096 | 793 | 232 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1050 |
| Msa1198970 | AT1G68740.2 | 66.017 | 718 | 224 | 10 | 1 | 706 | 1 | 710 | 0.0 | 918 |
| Msa1198970 | AT3G23430.1 | 45.839 | 805 | 374 | 13 | 1 | 773 | 1 | 775 | 0.0 | 704 |
| Msa1198970 | AT3G29060.1 | 35.084 | 838 | 437 | 18 | 2 | 776 | 1 | 794 | 1.90e-150 | 459 |
| Msa1198970 | AT1G26730.1 | 37.277 | 786 | 447 | 15 | 2 | 780 | 1 | 747 | 1.06e-149 | 456 |
| Msa1198970 | AT1G35350.1 | 36.226 | 795 | 444 | 19 | 2 | 780 | 1 | 748 | 3.11e-149 | 455 |
| Msa1198970 | AT1G14040.1 | 34.881 | 840 | 456 | 20 | 2 | 780 | 1 | 810 | 1.15e-146 | 450 |
| Msa1198970 | AT4G25350.1 | 34.893 | 791 | 453 | 11 | 2 | 780 | 1 | 741 | 9.26e-145 | 443 |
| Msa1198970 | AT1G69480.2 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 3.94e-140 | 432 |
| Msa1198970 | AT1G69480.1 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 3.94e-140 | 432 |
| Msa1198970 | AT2G03260.1 | 33.453 | 834 | 470 | 17 | 2 | 780 | 1 | 804 | 5.18e-135 | 420 |
| Msa1198970 | AT2G03240.1 | 32.974 | 834 | 490 | 18 | 2 | 780 | 1 | 820 | 5.01e-131 | 410 |
| Msa1198970 | AT1G35350.2 | 41.715 | 513 | 293 | 6 | 271 | 780 | 55 | 564 | 4.64e-128 | 394 |
| Msa1198970 | AT2G03260.2 | 36.946 | 609 | 349 | 10 | 189 | 780 | 1 | 591 | 8.19e-125 | 386 |
| Msa1198970 | AT1G26730.2 | 34.540 | 718 | 424 | 15 | 2 | 712 | 1 | 679 | 3.01e-115 | 365 |
| Msa1198970 | AT2G03250.1 | 32.653 | 735 | 432 | 17 | 2 | 715 | 1 | 693 | 3.74e-105 | 339 |
| Msa1198970 | AT2G03250.2 | 31.260 | 627 | 373 | 15 | 2 | 612 | 1 | 585 | 8.83e-76 | 257 |
| Msa1198970 | AT2G32295.1 | 28.493 | 365 | 236 | 16 | 432 | 781 | 98 | 452 | 1.38e-24 | 108 |
| Msa1198970 | AT2G32295.2 | 28.493 | 365 | 236 | 16 | 432 | 781 | 98 | 452 | 1.38e-24 | 108 |
| Msa1198970 | AT5G35730.1 | 27.901 | 362 | 232 | 12 | 432 | 781 | 102 | 446 | 3.53e-22 | 100 |
Find 163 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGCTCCTTCAAGTATT+TGG | 0.098484 | 8_1:+50818428 | None:intergenic |
| GAACTCATTTGATGATTATT+TGG | 0.164431 | 8_1:+50825690 | None:intergenic |
| TGTCCTTTCTGCCATATTAT+TGG | 0.182093 | 8_1:-50819661 | Msa1198970:CDS |
| GCTTCTCCACTGAGGGAATT+TGG | 0.194566 | 8_1:+50826000 | None:intergenic |
| ACAAAAGCTTCTTTCCATTC+TGG | 0.212257 | 8_1:+50825777 | None:intergenic |
| GCTAAGGAGCCTAGAGTTTA+TGG | 0.215307 | 8_1:-50819771 | Msa1198970:CDS |
| TATTAACCTTATTGAGGTTT+TGG | 0.228739 | 8_1:+50825356 | None:intergenic |
| TTTCTACATTTCTTCCTCTA+TGG | 0.229554 | 8_1:-50820612 | Msa1198970:CDS |
| GACTATTTACTGGATGCTTT+TGG | 0.234826 | 8_1:-50820879 | Msa1198970:CDS |
| TTCCTTGCCCACTAAGAAAA+TGG | 0.237152 | 8_1:+50823829 | None:intergenic |
| AAAATAAAGTTTACTTGAAT+TGG | 0.251298 | 8_1:+50825603 | None:intergenic |
| GCACAAGTTCAATTCCTTCT+TGG | 0.261445 | 8_1:-50820414 | Msa1198970:CDS |
| GAGAAAGAGTTTCTTGATAG+AGG | 0.262919 | 8_1:-50825316 | Msa1198970:CDS |
| ATGGCATGTTACTATATAAC+TGG | 0.266181 | 8_1:-50819752 | Msa1198970:CDS |
| TGGTTTCATTGAGCTTTATA+AGG | 0.272211 | 8_1:-50823634 | Msa1198970:CDS |
| ATAAATTCAGGACTATTTAC+TGG | 0.286750 | 8_1:-50820889 | Msa1198970:intron |
| ATTTCTTAACCAAGGATTCT+TGG | 0.294130 | 8_1:+50819323 | None:intergenic |
| CACAAGATGGTGTTATATAT+TGG | 0.297048 | 8_1:+50825899 | None:intergenic |
| GTGTGATAAGGAACATAATT+TGG | 0.298051 | 8_1:-50820174 | Msa1198970:CDS |
| ACAAGAACAAAGAGAGAAAA+TGG | 0.299855 | 8_1:-50825835 | Msa1198970:exon |
| CAGAGAACAAACAGAGGATT+TGG | 0.309805 | 8_1:-50823949 | Msa1198970:CDS |
| AACTTTCTTAGTGATGAAAA+AGG | 0.319449 | 8_1:+50825654 | None:intergenic |
| ACACGAAGCACACCACCTTC+TGG | 0.324304 | 8_1:+50823699 | None:intergenic |
| ATCTGCTCCTTCAAGTATTT+GGG | 0.324691 | 8_1:+50818429 | None:intergenic |
| TGAGCTCAAATCTGCATTCA+TGG | 0.325797 | 8_1:-50825260 | Msa1198970:CDS |
| TAGGATATTTGAATGATTAT+AGG | 0.326678 | 8_1:-50823608 | Msa1198970:intron |
| AACTTTGTACCAATTGTATT+GGG | 0.326926 | 8_1:-50819382 | Msa1198970:CDS |
| TGCATTGCTCTCCAATAATA+TGG | 0.328656 | 8_1:+50819650 | None:intergenic |
| ATCTATTTACTACTTGTCTA+TGG | 0.338255 | 8_1:-50819280 | Msa1198970:intron |
| TTGGGACTTTGTAAAGGATT+GGG | 0.340978 | 8_1:-50819364 | Msa1198970:CDS |
| CAACTTTGTACCAATTGTAT+TGG | 0.342154 | 8_1:-50819383 | Msa1198970:CDS |
| AGTTTACTTGAATTGGTTCA+TGG | 0.347483 | 8_1:+50825610 | None:intergenic |
| TTTAGACCAAAACCTCAATA+AGG | 0.348820 | 8_1:-50825362 | Msa1198970:CDS |
| CTGAGGGAATTTGGAAGATA+TGG | 0.351796 | 8_1:+50826009 | None:intergenic |
| ACCACTTCCTTTGTGTGATA+AGG | 0.361753 | 8_1:-50820186 | Msa1198970:CDS |
| TCAACTACTTTGAGATAGAT+TGG | 0.368425 | 8_1:+50823135 | None:intergenic |
| ATAAATCAATGGATTTGAAA+TGG | 0.376768 | 8_1:-50823881 | Msa1198970:CDS |
| AGGTATTAAACATTACTCTA+AGG | 0.384634 | 8_1:-50818823 | Msa1198970:CDS |
| AGAAATTAGTTACCTTGTAA+TGG | 0.385123 | 8_1:-50823757 | Msa1198970:CDS |
| TAGCATCAGTGTCAGCAAAT+TGG | 0.391037 | 8_1:+50825404 | None:intergenic |
| AAGTTATTAGAAGAGGACTA+TGG | 0.394611 | 8_1:-50818718 | Msa1198970:CDS |
| TTCTCCCTAGGTTCTGATGC+TGG | 0.401309 | 8_1:-50820036 | Msa1198970:intron |
| ACAAATCACCTTATCAATCT+AGG | 0.401577 | 8_1:-50819507 | Msa1198970:CDS |
| CATTTGACTCTACTCACAAA+AGG | 0.402742 | 8_1:-50820447 | Msa1198970:CDS |
| AGAAAGAGTTTCTTGATAGA+GGG | 0.409944 | 8_1:-50825315 | Msa1198970:CDS |
| TAAATCAATGGATTTGAAAT+GGG | 0.413347 | 8_1:-50823880 | Msa1198970:CDS |
| AAGGTAACTAATTTCTGAAA+AGG | 0.416741 | 8_1:+50823764 | None:intergenic |
| TCATCCACATTCTCTATTAA+CGG | 0.416803 | 8_1:-50825184 | Msa1198970:intron |
| CATATTTAGCATTTGATGTA+GGG | 0.422345 | 8_1:-50818462 | Msa1198970:three_prime_UTR |
| ACATTACTCTAAGGCTTGCT+TGG | 0.424324 | 8_1:-50818814 | Msa1198970:CDS |
| TCATCCTCCACTTCATGAAA+AGG | 0.425572 | 8_1:+50818508 | None:intergenic |
| TTACAAAGTCCCAATACAAT+TGG | 0.428051 | 8_1:+50819373 | None:intergenic |
| AGGATTGGGGTTTGCTTCAA+AGG | 0.430264 | 8_1:-50819350 | Msa1198970:CDS |
| ATTACAGGTGGTGAAGTTCA+TGG | 0.430366 | 8_1:-50821811 | Msa1198970:intron |
| ATTGAGCTTTATAAGGGCCT+AGG | 0.431124 | 8_1:-50823627 | Msa1198970:CDS |
| ATTGGGACTTTGTAAAGGAT+TGG | 0.433352 | 8_1:-50819365 | Msa1198970:CDS |
| AGCTATAAGACTCAAGACTA+TGG | 0.433500 | 8_1:-50819728 | Msa1198970:CDS |
| GATCATATCCGGTGGCGGTT+TGG | 0.436146 | 8_1:-50826059 | Msa1198970:five_prime_UTR |
| GGTTTCATTGAGCTTTATAA+GGG | 0.440025 | 8_1:-50823633 | Msa1198970:CDS |
| ATAAGGTTAATAAATTCTAT+AGG | 0.440648 | 8_1:-50825345 | Msa1198970:CDS |
| GAAATTCTCTAAGCAATTTG+AGG | 0.442628 | 8_1:-50825811 | Msa1198970:CDS |
| GCATATTTAGCATTTGATGT+AGG | 0.449207 | 8_1:-50818463 | Msa1198970:three_prime_UTR |
| CATATTTGCCTAGATTGATA+AGG | 0.449824 | 8_1:+50819499 | None:intergenic |
| AAAGGAACTCCAAGAATCCT+TGG | 0.449952 | 8_1:-50819332 | Msa1198970:CDS |
| GGCTGATCAACTTTGCAGTC+AGG | 0.450379 | 8_1:-50820003 | Msa1198970:intron |
| TTTCGAGATAGTTCCGACTA+AGG | 0.452433 | 8_1:-50820541 | Msa1198970:CDS |
| TGATTATTGGCAACTTAAGA+AGG | 0.460532 | 8_1:-50825754 | Msa1198970:CDS |
| GAAAGAGTTTCTTGATAGAG+GGG | 0.460793 | 8_1:-50825314 | Msa1198970:CDS |
| TTCATGGATAAGAAAGGTAA+AGG | 0.465006 | 8_1:-50825244 | Msa1198970:CDS |
| CTTGTTTCATCAACTAGTAA+AGG | 0.467786 | 8_1:-50825454 | Msa1198970:CDS |
| AGAATTTATTAACCTTATTG+AGG | 0.469370 | 8_1:+50825350 | None:intergenic |
| TGCTAAAGGTGATCATAGAA+AGG | 0.471196 | 8_1:-50821757 | Msa1198970:CDS |
| ATGCAGAGGAAGACTCTGTT+AGG | 0.473028 | 8_1:-50823974 | Msa1198970:intron |
| TGGGACTTTGTAAAGGATTG+GGG | 0.475551 | 8_1:-50819363 | Msa1198970:CDS |
| ATTGTATTGGGACTTTGTAA+AGG | 0.478827 | 8_1:-50819370 | Msa1198970:CDS |
| AATTTGGTCACCTCTTTACA+AGG | 0.480240 | 8_1:-50820158 | Msa1198970:intron |
| CAAATGCTAAATATGCCAAT+TGG | 0.482039 | 8_1:+50818470 | None:intergenic |
| TGAGACAGATTCCTCCTCCT+TGG | 0.484421 | 8_1:+50825204 | None:intergenic |
| ATTTCTAGTGTGCAAGGAGA+TGG | 0.490178 | 8_1:-50819545 | Msa1198970:intron |
| AACTCTAGGCTCCTTAGCAT+TGG | 0.493715 | 8_1:+50819776 | None:intergenic |
| CTTTATAGGTTCCAATGCTA+AGG | 0.494715 | 8_1:-50819787 | Msa1198970:intron |
| GGTAAATTGAGGACATTATC+CGG | 0.496131 | 8_1:-50823852 | Msa1198970:CDS |
| AGAAGACTAATAATGCCAAT+TGG | 0.498492 | 8_1:-50818485 | Msa1198970:exon |
| TGACCGGTATATAATGTTGA+AGG | 0.499814 | 8_1:+50820216 | None:intergenic |
| TATAATCATTCAAATATCCT+AGG | 0.503873 | 8_1:+50823610 | None:intergenic |
| ACATCAAAATTCACTCTACA+TGG | 0.506696 | 8_1:-50820803 | Msa1198970:CDS |
| GTTTCAGCTATGTTAGCTGC+AGG | 0.508558 | 8_1:-50819477 | Msa1198970:CDS |
| ATCAATTCATTTCTTAACCA+AGG | 0.508898 | 8_1:+50819315 | None:intergenic |
| ATATTATTGGAGAGCAATGC+AGG | 0.511799 | 8_1:-50819648 | Msa1198970:intron |
| TCATGGATAAGAAAGGTAAA+GGG | 0.512773 | 8_1:-50825243 | Msa1198970:CDS |
| ATTTGACTCTACTCACAAAA+GGG | 0.513008 | 8_1:-50820446 | Msa1198970:CDS |
| GGCTGTGAAGTGATCATATC+CGG | 0.514317 | 8_1:-50826070 | None:intergenic |
| GAGGACTATGGAATTTCTAC+AGG | 0.514396 | 8_1:-50818706 | Msa1198970:intron |
| GCACTTGAAGTTATTAGAAG+AGG | 0.514485 | 8_1:-50818725 | Msa1198970:CDS |
| TGAACAAATCTTCCATTACA+AGG | 0.514803 | 8_1:+50823745 | None:intergenic |
| CATGAGCATCTAAATAATGC+TGG | 0.518926 | 8_1:-50818562 | Msa1198970:CDS |
| GTTTGAGAAGGTGTTGTCAA+AGG | 0.521767 | 8_1:+50823786 | None:intergenic |
| ATGGATTTGAAATGGGAAGA+TGG | 0.530453 | 8_1:-50823873 | Msa1198970:CDS |
| AAATTCTCTAAGCAATTTGA+GGG | 0.530514 | 8_1:-50825810 | Msa1198970:CDS |
| TGTTTACATCAACTTGAATG+AGG | 0.540287 | 8_1:+50818399 | None:intergenic |
| AAATGAAGAGGATAAATCAA+TGG | 0.543222 | 8_1:-50823892 | Msa1198970:CDS |
| ATTACCGTTAATAGAGAATG+TGG | 0.545235 | 8_1:+50825180 | None:intergenic |
| AGGGACAACTCATTCCAGAA+TGG | 0.545665 | 8_1:-50825791 | Msa1198970:CDS |
| ATTTCTGAAAAGGTTTGAGA+AGG | 0.545715 | 8_1:+50823774 | None:intergenic |
| GAATCTTTATAAATGCAAGC+AGG | 0.546938 | 8_1:+50823296 | None:intergenic |
| CAATAATGTTGCAGCCATAG+AGG | 0.547217 | 8_1:+50820598 | None:intergenic |
| AAACTGTCTATCCTGTGCTT+AGG | 0.551095 | 8_1:-50820780 | Msa1198970:intron |
| GCCCCTTCAACATTATATAC+CGG | 0.551905 | 8_1:-50820219 | Msa1198970:CDS |
| GATTCCACCCAAATACTTGA+AGG | 0.553366 | 8_1:-50818436 | Msa1198970:three_prime_UTR |
| TTCTCACTATTCCAAGGAGG+AGG | 0.553993 | 8_1:-50825215 | Msa1198970:CDS |
| AGTAACATGCCATAAACTCT+AGG | 0.555517 | 8_1:+50819762 | None:intergenic |
| TCTGCATTCATGGATAAGAA+AGG | 0.557752 | 8_1:-50825250 | Msa1198970:CDS |
| TGCTCCTTCAAGTATTTGGG+TGG | 0.558848 | 8_1:+50818432 | None:intergenic |
| GCAAGGAGATGGTTTGATGA+AGG | 0.560927 | 8_1:-50819534 | Msa1198970:CDS |
| GAAAATTGTGTATACATATG+TGG | 0.562177 | 8_1:+50818330 | None:intergenic |
| TTGCCCACTAAGAAAATGGC+CGG | 0.564116 | 8_1:+50823833 | None:intergenic |
| TGGCAAGTTTAGAGCAGTGA+AGG | 0.564530 | 8_1:-50818542 | Msa1198970:CDS |
| AAGGAGATGGTTTGATGAAG+GGG | 0.566540 | 8_1:-50819532 | Msa1198970:CDS |
| TGGTGGTGGCTAGTTTATGC+AGG | 0.567936 | 8_1:+50826029 | None:intergenic |
| TCCACTTCATGAAAAGGAAG+TGG | 0.569024 | 8_1:+50818514 | None:intergenic |
| CTGTACTTTAGTTCCTTAGT+CGG | 0.573770 | 8_1:+50820528 | None:intergenic |
| TGAATCAAATGAAAATGAAG+AGG | 0.574589 | 8_1:-50823904 | Msa1198970:CDS |
| TCCTTATCACACAAAGGAAG+TGG | 0.575379 | 8_1:+50820185 | None:intergenic |
| GAAAGTGACCAAACCGCCAC+CGG | 0.576346 | 8_1:+50826051 | None:intergenic |
| ATATTTAGCATTTGATGTAG+GGG | 0.578910 | 8_1:-50818461 | Msa1198970:three_prime_UTR |
| CATGCAGAAAAGATGATCAA+AGG | 0.585159 | 8_1:-50823657 | Msa1198970:CDS |
| GCATACAAGTAATAGTAAGA+AGG | 0.587658 | 8_1:+50820240 | None:intergenic |
| TACAATGTCTATGACTGCTG+TGG | 0.588387 | 8_1:-50820487 | Msa1198970:CDS |
| TCTCCAATAATATGGCAGAA+AGG | 0.590845 | 8_1:+50819658 | None:intergenic |
| AATGGGAAGATGGTAAATTG+AGG | 0.594587 | 8_1:-50823863 | Msa1198970:CDS |
| GGTGAAGTTCATGGATGAAG+TGG | 0.595502 | 8_1:-50821802 | Msa1198970:CDS |
| AAGGAATTGAACTTGTGCAT+AGG | 0.598938 | 8_1:+50820419 | None:intergenic |
| CAAGGAGATGGTTTGATGAA+GGG | 0.600063 | 8_1:-50819533 | Msa1198970:CDS |
| ACTATATGCTTCTCCACTGA+GGG | 0.600576 | 8_1:+50825993 | None:intergenic |
| GACCGGTATATAATGTTGAA+GGG | 0.601265 | 8_1:+50820217 | None:intergenic |
| ATGTCTATGACTGCTGTGGT+TGG | 0.604592 | 8_1:-50820483 | Msa1198970:CDS |
| TGGCATGTTACTATATAACT+GGG | 0.604737 | 8_1:-50819751 | Msa1198970:CDS |
| ATGGCTGCAACATTATTGCA+TGG | 0.604892 | 8_1:-50820593 | Msa1198970:CDS |
| AGGGAATTTGGAAGATATGG+TGG | 0.609626 | 8_1:+50826012 | None:intergenic |
| GAACTCTTCTCACTATTCCA+AGG | 0.613505 | 8_1:-50825221 | Msa1198970:CDS |
| AAGACTATGGATACTGCATG+AGG | 0.618783 | 8_1:-50819715 | Msa1198970:CDS |
| TCACACAAAGGAAGTGGTAA+CGG | 0.620128 | 8_1:+50820191 | None:intergenic |
| GAATTTGGAAGATATGGTGG+TGG | 0.621088 | 8_1:+50826015 | None:intergenic |
| ACCGGTATATAATGTTGAAG+GGG | 0.629629 | 8_1:+50820218 | None:intergenic |
| TGCTTCGTGTTAATAAAACA+AGG | 0.630774 | 8_1:-50823686 | Msa1198970:CDS |
| GAAGTGATCATATCCGGTGG+CGG | 0.632061 | 8_1:-50826064 | Msa1198970:five_prime_UTR |
| TAATCATCAAATGAGTTCAG+TGG | 0.642708 | 8_1:-50825685 | Msa1198970:CDS |
| TCAAGAAAATGCAATCCAGA+AGG | 0.642722 | 8_1:-50823714 | Msa1198970:CDS |
| AGAAAATGCAATCCAGAAGG+TGG | 0.643834 | 8_1:-50823711 | Msa1198970:CDS |
| TAATAAATTCTATAGGACAA+AGG | 0.644773 | 8_1:-50825338 | Msa1198970:CDS |
| TACTATATGCTTCTCCACTG+AGG | 0.646438 | 8_1:+50825992 | None:intergenic |
| GTGGGCAAGGAAAGAATGTG+AGG | 0.650577 | 8_1:-50823818 | Msa1198970:CDS |
| GCAGAAAAGATGATCAAAGG+TGG | 0.655712 | 8_1:-50823654 | Msa1198970:CDS |
| TTATGTTCCTTATCACACAA+AGG | 0.659762 | 8_1:+50820179 | None:intergenic |
| TATCTTCCAAATTCCCTCAG+TGG | 0.667629 | 8_1:-50826006 | Msa1198970:five_prime_UTR |
| GAAGTTCATGGATGAAGTGG+AGG | 0.667764 | 8_1:-50821799 | Msa1198970:CDS |
| GATTCTGAAGAAATTTGACA+AGG | 0.671965 | 8_1:-50823278 | Msa1198970:intron |
| AGACTATGGATACTGCATGA+GGG | 0.676026 | 8_1:-50819714 | Msa1198970:CDS |
| CTCTTCTCACTATTCCAAGG+AGG | 0.702664 | 8_1:-50825218 | Msa1198970:CDS |
| ATATTTCAACAACTCAGACA+AGG | 0.704761 | 8_1:-50823106 | Msa1198970:intron |
| TAGGAGCAGAGAACAAACAG+AGG | 0.705511 | 8_1:-50823955 | Msa1198970:CDS |
| TGTGAAGTGATCATATCCGG+TGG | 0.747621 | 8_1:-50826067 | None:intergenic |
| GTGTTGAATGAAACACAAGA+TGG | 0.769647 | 8_1:+50825886 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAAATAAATATTTTAT+TGG | - | chr8_1:50825772-50825791 | Msa1198970:CDS | 0.0% |
| !!! | TTTTTTTTTTGGAATTTTAT+AGG | - | chr8_1:50818881-50818900 | Msa1198970:intron | 10.0% |
| !! | TAAGTTGTATTTATTTAAAT+AGG | - | chr8_1:50819457-50819476 | Msa1198970:CDS | 10.0% |
| !! | AAGTTGTATTTATTTAAATA+GGG | - | chr8_1:50819458-50819477 | Msa1198970:CDS | 10.0% |
| !! | ATTTGAAAATTATCATAAAA+AGG | - | chr8_1:50819583-50819602 | Msa1198970:intron | 10.0% |
| !!! | CATTTTTTTAATATAAATTG+TGG | + | chr8_1:50821135-50821154 | None:intergenic | 10.0% |
| !!! | AACAATTTTGTTAAAATATT+GGG | + | chr8_1:50821553-50821572 | None:intergenic | 10.0% |
| !! | AGAATAAAAAATTACATAAA+GGG | + | chr8_1:50822952-50822971 | None:intergenic | 10.0% |
| !! | AAGAATAAAAAATTACATAA+AGG | + | chr8_1:50822953-50822972 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTTTAATAACAAA+AGG | - | chr8_1:50822971-50822990 | Msa1198970:intron | 10.0% |
| !!! | AAAATGTTTGATTTTTTTAT+TGG | - | chr8_1:50823403-50823422 | Msa1198970:intron | 10.0% |
| !! | AAAATAAAGTTTACTTGAAT+TGG | + | chr8_1:50818769-50818788 | None:intergenic | 15.0% |
| !! | ATAAGGTTAATAAATTCTAT+AGG | - | chr8_1:50819024-50819043 | Msa1198970:intron | 15.0% |
| !!! | CTATTTTATTAAACTATTAC+AGG | + | chr8_1:50819764-50819783 | None:intergenic | 15.0% |
| !!! | CAACAATTTTGTTAAAATAT+TGG | + | chr8_1:50821554-50821573 | None:intergenic | 15.0% |
| !!! | ATATTTTAACAAAATTGTTG+AGG | - | chr8_1:50821554-50821573 | Msa1198970:intron | 15.0% |
| !!! | TATTTTAACAAAATTGTTGA+GGG | - | chr8_1:50821555-50821574 | Msa1198970:intron | 15.0% |
| !! | TATATATATATATGATTGGT+TGG | + | chr8_1:50822308-50822327 | None:intergenic | 15.0% |
| !! | AGAAAAAGTGAAAATAATAA+AGG | + | chr8_1:50822716-50822735 | None:intergenic | 15.0% |
| !!! | TTCAAAATTATGTATTGTTT+TGG | - | chr8_1:50824288-50824307 | Msa1198970:intron | 15.0% |
| !!! | TGTGTTTTTTTTTTTTTTCA+TGG | - | chr8_1:50824392-50824411 | Msa1198970:intron | 15.0% |
| !!! | TCTTATTTATATAATCTGAA+AGG | + | chr8_1:50825506-50825525 | None:intergenic | 15.0% |
| !!! | ATGATTATTTGGTTTTTTGT+TGG | + | chr8_1:50818671-50818690 | None:intergenic | 20.0% |
| !! | AGAATTTATTAACCTTATTG+AGG | + | chr8_1:50819022-50819041 | None:intergenic | 20.0% |
| !! | TAATAAATTCTATAGGACAA+AGG | - | chr8_1:50819031-50819050 | Msa1198970:intron | 20.0% |
| !!! | AATATCCATTTGTTTTTTCA+AGG | + | chr8_1:50819084-50819103 | None:intergenic | 20.0% |
| !! | TATTTAAATAGGGTCTAAAA+TGG | - | chr8_1:50819468-50819487 | Msa1198970:CDS | 20.0% |
| !! | TAGACTATACAAAATGAATA+TGG | - | chr8_1:50819531-50819550 | Msa1198970:CDS | 20.0% |
| !! | AGACTATACAAAATGAATAT+GGG | - | chr8_1:50819532-50819551 | Msa1198970:CDS | 20.0% |
| !!! | TTTCTTGGTTAAATTTTACA+AGG | + | chr8_1:50819651-50819670 | None:intergenic | 20.0% |
| !!! | ATAAATCAATGGATTTGAAA+TGG | - | chr8_1:50820488-50820507 | Msa1198970:CDS | 20.0% |
| !!! | TAAATCAATGGATTTGAAAT+GGG | - | chr8_1:50820489-50820508 | Msa1198970:CDS | 20.0% |
| !! | TATAATCATTCAAATATCCT+AGG | + | chr8_1:50820762-50820781 | None:intergenic | 20.0% |
| !! | TAGGATATTTGAATGATTAT+AGG | - | chr8_1:50820761-50820780 | Msa1198970:intron | 20.0% |
| !! | AATGTTTAGTGAATATAACA+AGG | - | chr8_1:50820925-50820944 | Msa1198970:intron | 20.0% |
| !! | ACATGATTAATTATGTTCAA+TGG | + | chr8_1:50820971-50820990 | None:intergenic | 20.0% |
| !!! | CTTCATGATATTGATTTTTT+AGG | - | chr8_1:50821042-50821061 | Msa1198970:intron | 20.0% |
| !!! | AATGAAGTTTTTCATATTAG+AGG | - | chr8_1:50821151-50821170 | Msa1198970:intron | 20.0% |
| !! | CAAATATATTCTTTCATCAA+AGG | + | chr8_1:50821347-50821366 | None:intergenic | 20.0% |
| !! | CTTTGATGAAAGAATATATT+TGG | - | chr8_1:50821345-50821364 | Msa1198970:intron | 20.0% |
| !! | GACATGAATTATATGATTAT+TGG | + | chr8_1:50821455-50821474 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTGTATGATTCT+AGG | + | chr8_1:50821493-50821512 | None:intergenic | 20.0% |
| !! | AAATATTGGGAAAATAAAAG+AGG | + | chr8_1:50821540-50821559 | None:intergenic | 20.0% |
| !! | ACAAATAAGTTATTTAATGC+TGG | - | chr8_1:50821970-50821989 | Msa1198970:intron | 20.0% |
| !! | ACAAATAAGTTATTTAATGC+TGG | - | chr8_1:50821970-50821989 | Msa1198970:intron | 20.0% |
| !!! | GATTCTTTTTTATGATGAAT+TGG | + | chr8_1:50822655-50822674 | None:intergenic | 20.0% |
| !! | TTACAAGTGTTTATAAAAGT+GGG | + | chr8_1:50822905-50822924 | None:intergenic | 20.0% |
| !! | TTTACAAGTGTTTATAAAAG+TGG | + | chr8_1:50822906-50822925 | None:intergenic | 20.0% |
| !!! | TTTTAATAACAAAAGGCAAT+TGG | - | chr8_1:50822978-50822997 | Msa1198970:intron | 20.0% |
| !! | CAAGTTACTCATAAAATTAA+CGG | - | chr8_1:50823447-50823466 | Msa1198970:intron | 20.0% |
| !! | TAAATAGTCCTGAATTTATT+TGG | + | chr8_1:50823479-50823498 | None:intergenic | 20.0% |
| !!! | AAATACTTTTAATGATCGAA+CGG | + | chr8_1:50824439-50824458 | None:intergenic | 20.0% |
| !! | TAGTTACATGATTTCTTTAT+AGG | - | chr8_1:50824568-50824587 | Msa1198970:intron | 20.0% |
| !! | TTGAAAATATGCTTAAAGAA+AGG | + | chr8_1:50824757-50824776 | None:intergenic | 20.0% |
| !!! | CATCTTATATTAAAGTTGAT+TGG | + | chr8_1:50825372-50825391 | None:intergenic | 20.0% |
| !! | TTACTTCTTTAATCTAGATT+AGG | + | chr8_1:50825465-50825484 | None:intergenic | 20.0% |
| !!! | AATATTATTTTTGCTTATGC+AGG | - | chr8_1:50825526-50825545 | Msa1198970:intron | 20.0% |
| !!! | AATATTTTATTGGTTCAGAT+TGG | - | chr8_1:50825782-50825801 | Msa1198970:CDS | 20.0% |
| !!! | AACTTGATTATTTTTTTCTG+TGG | - | chr8_1:50825999-50826018 | Msa1198970:five_prime_UTR | 20.0% |
| ! | AAATTCTCTAAGCAATTTGA+GGG | - | chr8_1:50818559-50818578 | Msa1198970:CDS | 25.0% |
| !!! | AAGAAGCTTTTGTTGATTAT+TGG | - | chr8_1:50818602-50818621 | Msa1198970:intron | 25.0% |
| !! | GAACTCATTTGATGATTATT+TGG | + | chr8_1:50818682-50818701 | None:intergenic | 25.0% |
| ! | AACTTTCTTAGTGATGAAAA+AGG | + | chr8_1:50818718-50818737 | None:intergenic | 25.0% |
| !! | TTGGAATTTTATAGGTTCAT+AGG | - | chr8_1:50818889-50818908 | Msa1198970:intron | 25.0% |
| !! | TATTAACCTTATTGAGGTTT+TGG | + | chr8_1:50819016-50819035 | None:intergenic | 25.0% |
| !! | TATAGAAATAGCTTGTAGAT+AGG | - | chr8_1:50819379-50819398 | Msa1198970:CDS | 25.0% |
| !!! | AGACAATGTTCTAAAGTTAT+AGG | + | chr8_1:50819422-50819441 | None:intergenic | 25.0% |
| !! | GGTTAAATTTTACAAGGAAA+GGG | + | chr8_1:50819645-50819664 | None:intergenic | 25.0% |
| !! | TGGTTAAATTTTACAAGGAA+AGG | + | chr8_1:50819646-50819665 | None:intergenic | 25.0% |
| !!! | TACTTGTCTTATTCTTTTCT+TGG | + | chr8_1:50819666-50819685 | None:intergenic | 25.0% |
| ! | CTAATACTCTGTATATATAC+TGG | - | chr8_1:50820372-50820391 | Msa1198970:intron | 25.0% |
| ! | TGAATCAAATGAAAATGAAG+AGG | - | chr8_1:50820465-50820484 | Msa1198970:CDS | 25.0% |
| ! | AAATGAAGAGGATAAATCAA+TGG | - | chr8_1:50820477-50820496 | Msa1198970:CDS | 25.0% |
| !! | AAGGTAACTAATTTCTGAAA+AGG | + | chr8_1:50820608-50820627 | None:intergenic | 25.0% |
| ! | AGAAATTAGTTACCTTGTAA+TGG | - | chr8_1:50820612-50820631 | Msa1198970:CDS | 25.0% |
| ! | GTTAATACTGTTTGAATATG+TGG | - | chr8_1:50820886-50820905 | Msa1198970:intron | 25.0% |
| ! | AATAAATCATGTTGAGATGT+TGG | - | chr8_1:50821380-50821399 | Msa1198970:intron | 25.0% |
| ! | ATAATTCATGTCTTCACAAA+AGG | - | chr8_1:50821463-50821482 | Msa1198970:intron | 25.0% |
| !!! | CATTTTTTTCTTAGAAATCG+TGG | + | chr8_1:50821947-50821966 | None:intergenic | 25.0% |
| !!! | CATTTTTTTCTTAGAAATCG+TGG | + | chr8_1:50821947-50821966 | None:intergenic | 25.0% |
| !! | TTTTCTTAGAAATCGTGTTT+GGG | + | chr8_1:50822210-50822229 | None:intergenic | 25.0% |
| !! | TTTTTCTTAGAAATCGTGTT+TGG | + | chr8_1:50822211-50822230 | None:intergenic | 25.0% |
| ! | TTGTTTGTCCTAAAAATTAC+AGG | - | chr8_1:50822543-50822562 | Msa1198970:intron | 25.0% |
| !! | TTTGTCAAGAATTTTGCTAA+AGG | - | chr8_1:50822598-50822617 | Msa1198970:intron | 25.0% |
| !!! | TTTTATGATGAATTGGTCTA+AGG | + | chr8_1:50822648-50822667 | None:intergenic | 25.0% |
| !!! | CATGCAATTACTTTTTTCAT+TGG | - | chr8_1:50822676-50822695 | Msa1198970:intron | 25.0% |
| ! | TCACAAAACAAACAAACTAA+AGG | + | chr8_1:50822777-50822796 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTTGTACATACA+AGG | + | chr8_1:50822849-50822868 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTTGTACATACA+AGG | + | chr8_1:50822849-50822868 | None:intergenic | 25.0% |
| ! | AAAGAGAAAAAAGTAACCAT+AGG | + | chr8_1:50823040-50823059 | None:intergenic | 25.0% |
| ! | TAAAAGTCACACATTTCTAA+TGG | - | chr8_1:50823176-50823195 | Msa1198970:intron | 25.0% |
| ! | TCGTGTATTTGAATTAAATC+TGG | - | chr8_1:50823238-50823257 | Msa1198970:intron | 25.0% |
| ! | AATTTGTCCATAAAAACTTC+TGG | - | chr8_1:50823309-50823328 | Msa1198970:intron | 25.0% |
| !! | TTAAGTTCCAGAAGTTTTTA+TGG | + | chr8_1:50823319-50823338 | None:intergenic | 25.0% |
| !!! | TAAAAACTTCTGGAACTTAA+TGG | - | chr8_1:50823319-50823338 | Msa1198970:intron | 25.0% |
| !!! | ATTTTATGAGTAACTTGCTA+AGG | + | chr8_1:50823444-50823463 | None:intergenic | 25.0% |
| ! | ATAAATTCAGGACTATTTAC+TGG | - | chr8_1:50823480-50823499 | Msa1198970:intron | 25.0% |
| !!! | TTTTGGTGCATATGTTTTAA+TGG | - | chr8_1:50823518-50823537 | Msa1198970:intron | 25.0% |
| ! | ACTTAATTACCAGAAAAAGT+AGG | + | chr8_1:50823981-50824000 | None:intergenic | 25.0% |
| !! | ACTTGATTTTGTACATTTGA+TGG | - | chr8_1:50824024-50824043 | Msa1198970:intron | 25.0% |
| !! | ATCTTATTTATTGCATGTAC+AGG | - | chr8_1:50824106-50824125 | Msa1198970:intron | 25.0% |
| ! | AAAAAATGTACCTTGTAAAG+AGG | + | chr8_1:50824224-50824243 | None:intergenic | 25.0% |
| ! | TTCAAAAGTCATATACATGA+TGG | - | chr8_1:50824477-50824496 | Msa1198970:intron | 25.0% |
| ! | TATACATGATGGTTTATGAT+TGG | - | chr8_1:50824488-50824507 | Msa1198970:intron | 25.0% |
| !! | TATGAAAAAGATAGAAGTGT+TGG | - | chr8_1:50824928-50824947 | Msa1198970:intron | 25.0% |
| ! | AACTTTGTACCAATTGTATT+GGG | - | chr8_1:50824987-50825006 | Msa1198970:intron | 25.0% |
| ! | ATCAATTCATTTCTTAACCA+AGG | + | chr8_1:50825057-50825076 | None:intergenic | 25.0% |
| ! | ATCTATTTACTACTTGTCTA+TGG | - | chr8_1:50825089-50825108 | Msa1198970:intron | 25.0% |
| ! | TTGATTGGATACGATAATTA+GGG | + | chr8_1:50825357-50825376 | None:intergenic | 25.0% |
| ! | AGGTATTAAACATTACTCTA+AGG | - | chr8_1:50825546-50825565 | Msa1198970:intron | 25.0% |
| !! | CAACATTTTCAAAACTTGAA+TGG | + | chr8_1:50825595-50825614 | None:intergenic | 25.0% |
| ! | CATATTTAGCATTTGATGTA+GGG | - | chr8_1:50825907-50825926 | Msa1198970:five_prime_UTR | 25.0% |
| ! | ATATTTAGCATTTGATGTAG+GGG | - | chr8_1:50825908-50825927 | Msa1198970:five_prime_UTR | 25.0% |
| !!! | ATTTTTTTCTGTGGATTTGT+AGG | - | chr8_1:50826008-50826027 | Msa1198970:five_prime_UTR | 25.0% |
| ! | GAAAATTGTGTATACATATG+TGG | + | chr8_1:50826042-50826061 | None:intergenic | 25.0% |
| ! | TTGGAACAAAAAGTGAGTTT+TGG | + | chr8_1:50818454-50818473 | None:intergenic | 30.0% |
| !! | CACAAGATGGTGTTATATAT+TGG | + | chr8_1:50818473-50818492 | None:intergenic | 30.0% |
| ACAAGAACAAAGAGAGAAAA+TGG | - | chr8_1:50818534-50818553 | Msa1198970:CDS | 30.0% | |
| GAAATTCTCTAAGCAATTTG+AGG | - | chr8_1:50818558-50818577 | Msa1198970:CDS | 30.0% | |
| TGATTATTGGCAACTTAAGA+AGG | - | chr8_1:50818615-50818634 | Msa1198970:intron | 30.0% | |
| TAATCATCAAATGAGTTCAG+TGG | - | chr8_1:50818684-50818703 | Msa1198970:intron | 30.0% | |
| ! | AGTTTACTTGAATTGGTTCA+TGG | + | chr8_1:50818762-50818781 | None:intergenic | 30.0% |
| CTTGTTTCATCAACTAGTAA+AGG | - | chr8_1:50818915-50818934 | Msa1198970:intron | 30.0% | |
| TTTAGACCAAAACCTCAATA+AGG | - | chr8_1:50819007-50819026 | Msa1198970:intron | 30.0% | |
| AGAAAGAGTTTCTTGATAGA+GGG | - | chr8_1:50819054-50819073 | Msa1198970:intron | 30.0% | |
| TTCATGGATAAGAAAGGTAA+AGG | - | chr8_1:50819125-50819144 | Msa1198970:intron | 30.0% | |
| TCATGGATAAGAAAGGTAAA+GGG | - | chr8_1:50819126-50819145 | Msa1198970:intron | 30.0% | |
| TCATCCACATTCTCTATTAA+CGG | - | chr8_1:50819185-50819204 | Msa1198970:intron | 30.0% | |
| ATTACCGTTAATAGAGAATG+TGG | + | chr8_1:50819192-50819211 | None:intergenic | 30.0% | |
| ACCTTCAATATGAAGTTTCA+TGG | - | chr8_1:50819863-50819882 | Msa1198970:intron | 30.0% | |
| ACTGACACTTCATAATGAAT+AGG | + | chr8_1:50820275-50820294 | None:intergenic | 30.0% | |
| ! | ATTTCTGAAAAGGTTTGAGA+AGG | + | chr8_1:50820598-50820617 | None:intergenic | 30.0% |
| TGAACAAATCTTCCATTACA+AGG | + | chr8_1:50820627-50820646 | None:intergenic | 30.0% | |
| TGCTTCGTGTTAATAAAACA+AGG | - | chr8_1:50820683-50820702 | Msa1198970:intron | 30.0% | |
| ! | TGGTTTCATTGAGCTTTATA+AGG | - | chr8_1:50820735-50820754 | Msa1198970:intron | 30.0% |
| ! | GGTTTCATTGAGCTTTATAA+GGG | - | chr8_1:50820736-50820755 | Msa1198970:intron | 30.0% |
| GAATCTTTATAAATGCAAGC+AGG | + | chr8_1:50821076-50821095 | None:intergenic | 30.0% | |
| ! | GATTCTGAAGAAATTTGACA+AGG | - | chr8_1:50821091-50821110 | Msa1198970:intron | 30.0% |
| ATTCTTATGATTTCTCCTTC+AGG | - | chr8_1:50821191-50821210 | Msa1198970:intron | 30.0% | |
| !! | TCAACTACTTTGAGATAGAT+TGG | + | chr8_1:50821237-50821256 | None:intergenic | 30.0% |
| ATATTTCAACAACTCAGACA+AGG | - | chr8_1:50821263-50821282 | Msa1198970:intron | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr8_1:50821601-50821620 | Msa1198970:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr8_1:50821602-50821621 | Msa1198970:intron | 30.0% | |
| TGATACCATCTTATAAATCG+TGG | + | chr8_1:50821676-50821695 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr8_1:50821601-50821620 | Msa1198970:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr8_1:50821602-50821621 | Msa1198970:intron | 30.0% | |
| ! | TTTTCTTAGAAATCGTGGTT+GGG | + | chr8_1:50821942-50821961 | None:intergenic | 30.0% |
| ! | TTTTTCTTAGAAATCGTGGT+TGG | + | chr8_1:50821943-50821962 | None:intergenic | 30.0% |
| ! | TTATTTAATGCTGGTTGTGA+GGG | - | chr8_1:50821979-50821998 | Msa1198970:intron | 30.0% |
| ! | TTTTCTTAGAAATCGTGGTT+GGG | + | chr8_1:50821942-50821961 | None:intergenic | 30.0% |
| ! | TTTTTCTTAGAAATCGTGGT+TGG | + | chr8_1:50821943-50821962 | None:intergenic | 30.0% |
| ! | TTATTTAATGCTGGTTGTGA+GGG | - | chr8_1:50821979-50821998 | Msa1198970:intron | 30.0% |
| CTGACAATGTGTTTATAAGT+GGG | - | chr8_1:50821601-50821620 | Msa1198970:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr8_1:50821602-50821621 | Msa1198970:intron | 30.0% | |
| TTTGTCCTAAAAATTACAGG+TGG | - | chr8_1:50822546-50822565 | Msa1198970:intron | 30.0% | |
| AATCCAAAGAAAACACAAGA+TGG | - | chr8_1:50822804-50822823 | Msa1198970:intron | 30.0% | |
| TTGACCATTAATATCTCCTA+TGG | - | chr8_1:50823021-50823040 | Msa1198970:intron | 30.0% | |
| GTAACCATAGGAGATATTAA+TGG | + | chr8_1:50823028-50823047 | None:intergenic | 30.0% | |
| AATACAACAACTTCTAAGTC+AGG | + | chr8_1:50823157-50823176 | None:intergenic | 30.0% | |
| ACACATTTCTAATGGTTTGA+TGG | - | chr8_1:50823184-50823203 | Msa1198970:intron | 30.0% | |
| GGAATCTTCCAAATAAATTC+AGG | - | chr8_1:50823468-50823487 | Msa1198970:intron | 30.0% | |
| ! | ACTATTTACTGGATGCTTTT+GGG | - | chr8_1:50823491-50823510 | Msa1198970:intron | 30.0% |
| ACATCAAAATTCACTCTACA+TGG | - | chr8_1:50823566-50823585 | Msa1198970:intron | 30.0% | |
| !! | GTTCTAAAAACACTGATACA+AGG | + | chr8_1:50823647-50823666 | None:intergenic | 30.0% |
| !!! | TGTATCAGTGTTTTTAGAAC+CGG | - | chr8_1:50823647-50823666 | Msa1198970:CDS | 30.0% |
| TTTCTACATTTCTTCCTCTA+TGG | - | chr8_1:50823757-50823776 | Msa1198970:CDS | 30.0% | |
| ATTTGACTCTACTCACAAAA+GGG | - | chr8_1:50823923-50823942 | Msa1198970:CDS | 30.0% | |
| GCATACAAGTAATAGTAAGA+AGG | + | chr8_1:50824132-50824151 | None:intergenic | 30.0% | |
| TTATGTTCCTTATCACACAA+AGG | + | chr8_1:50824193-50824212 | None:intergenic | 30.0% | |
| GTGTGATAAGGAACATAATT+TGG | - | chr8_1:50824195-50824214 | Msa1198970:intron | 30.0% | |
| ATGGCATGTTACTATATAAC+TGG | - | chr8_1:50824617-50824636 | Msa1198970:intron | 30.0% | |
| TGGCATGTTACTATATAACT+GGG | - | chr8_1:50824618-50824637 | Msa1198970:intron | 30.0% | |
| !!! | ATTTTGATTTCTAGTGTGCA+AGG | - | chr8_1:50824818-50824837 | Msa1198970:intron | 30.0% |
| ACAAATCACCTTATCAATCT+AGG | - | chr8_1:50824862-50824881 | Msa1198970:intron | 30.0% | |
| CATATTTGCCTAGATTGATA+AGG | + | chr8_1:50824873-50824892 | None:intergenic | 30.0% | |
| !! | AAAAAGATAGAAGTGTTGGA+TGG | - | chr8_1:50824932-50824951 | Msa1198970:intron | 30.0% |
| CAACTTTGTACCAATTGTAT+TGG | - | chr8_1:50824986-50825005 | Msa1198970:intron | 30.0% | |
| TTACAAAGTCCCAATACAAT+TGG | + | chr8_1:50824999-50825018 | None:intergenic | 30.0% | |
| ATTGTATTGGGACTTTGTAA+AGG | - | chr8_1:50824999-50825018 | Msa1198970:intron | 30.0% | |
| ATTTCTTAACCAAGGATTCT+TGG | + | chr8_1:50825049-50825068 | None:intergenic | 30.0% | |
| ! | AATCTTTAGAGAGAGCAAAA+GGG | + | chr8_1:50825130-50825149 | None:intergenic | 30.0% |
| ! | TAATCTTTAGAGAGAGCAAA+AGG | + | chr8_1:50825131-50825150 | None:intergenic | 30.0% |
| GTTGATTGGATACGATAATT+AGG | + | chr8_1:50825358-50825377 | None:intergenic | 30.0% | |
| AGATAAAATGTCACAAAGTG+TGG | - | chr8_1:50825396-50825415 | Msa1198970:CDS | 30.0% | |
| AAGTTATTAGAAGAGGACTA+TGG | - | chr8_1:50825651-50825670 | Msa1198970:CDS | 30.0% | |
| AGAAGACTAATAATGCCAAT+TGG | - | chr8_1:50825884-50825903 | Msa1198970:five_prime_UTR | 30.0% | |
| CAAATGCTAAATATGCCAAT+TGG | + | chr8_1:50825902-50825921 | None:intergenic | 30.0% | |
| GCATATTTAGCATTTGATGT+AGG | - | chr8_1:50825906-50825925 | Msa1198970:five_prime_UTR | 30.0% | |
| TGTTTACATCAACTTGAATG+AGG | + | chr8_1:50825973-50825992 | None:intergenic | 30.0% | |
| GTGTTGAATGAAACACAAGA+TGG | + | chr8_1:50818486-50818505 | None:intergenic | 35.0% | |
| ACAAAAGCTTCTTTCCATTC+TGG | + | chr8_1:50818595-50818614 | None:intergenic | 35.0% | |
| GAGAAAGAGTTTCTTGATAG+AGG | - | chr8_1:50819053-50819072 | Msa1198970:intron | 35.0% | |
| GAAAGAGTTTCTTGATAGAG+GGG | - | chr8_1:50819055-50819074 | Msa1198970:intron | 35.0% | |
| GGAGTCCTTGAAAAAACAAA+TGG | - | chr8_1:50819076-50819095 | Msa1198970:intron | 35.0% | |
| TCTGCATTCATGGATAAGAA+AGG | - | chr8_1:50819119-50819138 | Msa1198970:intron | 35.0% | |
| GCTTGTAGATAGGTACATAT+AGG | - | chr8_1:50819389-50819408 | Msa1198970:CDS | 35.0% | |
| ! | AAATAGGGTCTAAAATGGTG+TGG | - | chr8_1:50819473-50819492 | Msa1198970:CDS | 35.0% |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_1:50819867-50819886 | None:intergenic | 35.0% | |
| TTGAACGTAACAACATGTGT+TGG | - | chr8_1:50819937-50819956 | Msa1198970:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | - | chr8_1:50819999-50820018 | Msa1198970:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_1:50819867-50819886 | None:intergenic | 35.0% | |
| TGTTAGACACTGAAACATGT+TGG | - | chr8_1:50820101-50820120 | Msa1198970:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | - | chr8_1:50819999-50820018 | Msa1198970:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | + | chr8_1:50819867-50819886 | None:intergenic | 35.0% | |
| TGTATATATACTGGATGCAG+AGG | - | chr8_1:50820381-50820400 | Msa1198970:intron | 35.0% | |
| ! | ATGGATTTGAAATGGGAAGA+TGG | - | chr8_1:50820496-50820515 | Msa1198970:CDS | 35.0% |
| AATGGGAAGATGGTAAATTG+AGG | - | chr8_1:50820506-50820525 | Msa1198970:CDS | 35.0% | |
| GGTAAATTGAGGACATTATC+CGG | - | chr8_1:50820517-50820536 | Msa1198970:CDS | 35.0% | |
| TCAAGAAAATGCAATCCAGA+AGG | - | chr8_1:50820655-50820674 | Msa1198970:intron | 35.0% | |
| CATGCAGAAAAGATGATCAA+AGG | - | chr8_1:50820712-50820731 | Msa1198970:intron | 35.0% | |
| AACTCAGACAAGGTAAACAA+TGG | - | chr8_1:50821273-50821292 | Msa1198970:intron | 35.0% | |
| GTGTTACCAACAATATCAAG+TGG | - | chr8_1:50821429-50821448 | Msa1198970:intron | 35.0% | |
| TATTGGCCACTTGATATTGT+TGG | + | chr8_1:50821438-50821457 | None:intergenic | 35.0% | |
| TTCATGTCTTCACAAAAGGA+TGG | - | chr8_1:50821467-50821486 | Msa1198970:intron | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr8_1:50821603-50821622 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr8_1:50821600-50821619 | Msa1198970:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr8_1:50821603-50821622 | Msa1198970:intron | 35.0% | |
| CCATCTTATAAATCGTGGTT+GGG | + | chr8_1:50821671-50821690 | None:intergenic | 35.0% | |
| ACCATCTTATAAATCGTGGT+TGG | + | chr8_1:50821672-50821691 | None:intergenic | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr8_1:50821603-50821622 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr8_1:50821600-50821619 | Msa1198970:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr8_1:50821603-50821622 | Msa1198970:intron | 35.0% | |
| TCACAAGCCTGTTTATAAGT+GGG | - | chr8_1:50821872-50821891 | Msa1198970:intron | 35.0% | |
| ! | GTTATTTAATGCTGGTTGTG+AGG | - | chr8_1:50821978-50821997 | Msa1198970:intron | 35.0% |
| ! | TATTTAATGCTGGTTGTGAG+GGG | - | chr8_1:50821980-50821999 | Msa1198970:intron | 35.0% |
| ! | GTTATTTAATGCTGGTTGTG+AGG | - | chr8_1:50821978-50821997 | Msa1198970:intron | 35.0% |
| ! | TATTTAATGCTGGTTGTGAG+GGG | - | chr8_1:50821980-50821999 | Msa1198970:intron | 35.0% |
| CCACTTATAAACACATTGTC+AGG | + | chr8_1:50821603-50821622 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr8_1:50821600-50821619 | Msa1198970:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr8_1:50821603-50821622 | Msa1198970:intron | 35.0% | |
| ! | CTTCACCACCTGTAATTTTT+AGG | + | chr8_1:50822554-50822573 | None:intergenic | 35.0% |
| TGCTAAAGGTGATCATAGAA+AGG | - | chr8_1:50822612-50822631 | Msa1198970:intron | 35.0% | |
| AAGGGTTATGCAAATATGCA+TGG | + | chr8_1:50822934-50822953 | None:intergenic | 35.0% | |
| ! | GACTATTTACTGGATGCTTT+TGG | - | chr8_1:50823490-50823509 | Msa1198970:intron | 35.0% |
| !! | GTTTTAATGGCTCATCTTAC+TGG | - | chr8_1:50823531-50823550 | Msa1198970:intron | 35.0% |
| ! | TCTTTTACTTACCTAAGCAC+AGG | + | chr8_1:50823603-50823622 | None:intergenic | 35.0% |
| ! | CTGTACTTTAGTTCCTTAGT+CGG | + | chr8_1:50823844-50823863 | None:intergenic | 35.0% |
| CATTTGACTCTACTCACAAA+AGG | - | chr8_1:50823922-50823941 | Msa1198970:CDS | 35.0% | |
| AAGGAATTGAACTTGTGCAT+AGG | + | chr8_1:50823953-50823972 | None:intergenic | 35.0% | |
| ACCGGTATATAATGTTGAAG+GGG | + | chr8_1:50824154-50824173 | None:intergenic | 35.0% | |
| GACCGGTATATAATGTTGAA+GGG | + | chr8_1:50824155-50824174 | None:intergenic | 35.0% | |
| TGACCGGTATATAATGTTGA+AGG | + | chr8_1:50824156-50824175 | None:intergenic | 35.0% | |
| AATTTGGTCACCTCTTTACA+AGG | - | chr8_1:50824211-50824230 | Msa1198970:intron | 35.0% | |
| ! | ATTGAATTCTGTTTCTCCCT+AGG | - | chr8_1:50824321-50824340 | Msa1198970:intron | 35.0% |
| !!! | TCTGATGCTGGACTTTTTTA+TGG | - | chr8_1:50824345-50824364 | Msa1198970:intron | 35.0% |
| CTTTATAGGTTCCAATGCTA+AGG | - | chr8_1:50824582-50824601 | Msa1198970:intron | 35.0% | |
| AGTAACATGCCATAAACTCT+AGG | + | chr8_1:50824610-50824629 | None:intergenic | 35.0% | |
| AGCTATAAGACTCAAGACTA+TGG | - | chr8_1:50824641-50824660 | Msa1198970:intron | 35.0% | |
| TGTCCTTTCTGCCATATTAT+TGG | - | chr8_1:50824708-50824727 | Msa1198970:intron | 35.0% | |
| TCTCCAATAATATGGCAGAA+AGG | + | chr8_1:50824714-50824733 | None:intergenic | 35.0% | |
| TGCATTGCTCTCCAATAATA+TGG | + | chr8_1:50824722-50824741 | None:intergenic | 35.0% | |
| ATATTATTGGAGAGCAATGC+AGG | - | chr8_1:50824721-50824740 | Msa1198970:intron | 35.0% | |
| ATTGGGACTTTGTAAAGGAT+TGG | - | chr8_1:50825004-50825023 | Msa1198970:intron | 35.0% | |
| TTGGGACTTTGTAAAGGATT+GGG | - | chr8_1:50825005-50825024 | Msa1198970:intron | 35.0% | |
| ACATCTTCAATCAGAAGAGT+CGG | + | chr8_1:50825174-50825193 | None:intergenic | 35.0% | |
| TGTTCGATACATGTTGGTAT+TGG | - | chr8_1:50825200-50825219 | Msa1198970:CDS | 35.0% | |
| GCACTTGAAGTTATTAGAAG+AGG | - | chr8_1:50825644-50825663 | Msa1198970:CDS | 35.0% | |
| CATGAGCATCTAAATAATGC+TGG | - | chr8_1:50825807-50825826 | Msa1198970:CDS | 35.0% | |
| ATCTGCTCCTTCAAGTATTT+GGG | + | chr8_1:50825943-50825962 | None:intergenic | 35.0% | |
| AATCTGCTCCTTCAAGTATT+TGG | + | chr8_1:50825944-50825963 | None:intergenic | 35.0% | |
| GAATTTGGAAGATATGGTGG+TGG | + | chr8_1:50818357-50818376 | None:intergenic | 40.0% | |
| AGGGAATTTGGAAGATATGG+TGG | + | chr8_1:50818360-50818379 | None:intergenic | 40.0% | |
| CTGAGGGAATTTGGAAGATA+TGG | + | chr8_1:50818363-50818382 | None:intergenic | 40.0% | |
| TATCTTCCAAATTCCCTCAG+TGG | - | chr8_1:50818363-50818382 | Msa1198970:three_prime_UTR | 40.0% | |
| ACTATATGCTTCTCCACTGA+GGG | + | chr8_1:50818379-50818398 | None:intergenic | 40.0% | |
| TACTATATGCTTCTCCACTG+AGG | + | chr8_1:50818380-50818399 | None:intergenic | 40.0% | |
| !!! | GTGAGTTTTGGTTGATATGC+TGG | + | chr8_1:50818442-50818461 | None:intergenic | 40.0% |
| TAGCATCAGTGTCAGCAAAT+TGG | + | chr8_1:50818968-50818987 | None:intergenic | 40.0% | |
| TGAGCTCAAATCTGCATTCA+TGG | - | chr8_1:50819109-50819128 | Msa1198970:intron | 40.0% | |
| GAACTCTTCTCACTATTCCA+AGG | - | chr8_1:50819148-50819167 | Msa1198970:intron | 40.0% | |
| GTCATTGTCAATCTTGTGGT+TGG | + | chr8_1:50819732-50819751 | None:intergenic | 40.0% | |
| ! | ACGTGTCATTGTCAATCTTG+TGG | + | chr8_1:50819736-50819755 | None:intergenic | 40.0% |
| GTGTTAGTGTTGTGTTGTGT+CGG | - | chr8_1:50819812-50819831 | Msa1198970:intron | 40.0% | |
| TGTTAGACACTGACACATGT+TGG | - | chr8_1:50819965-50819984 | Msa1198970:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+CGG | + | chr8_1:50819994-50820013 | None:intergenic | 40.0% |
| TTGAACGTGACAACATGTGT+TGG | - | chr8_1:50820073-50820092 | Msa1198970:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+CGG | + | chr8_1:50819994-50820013 | None:intergenic | 40.0% |
| TGTCAGACACTAACACATGT+TGG | - | chr8_1:50820237-50820256 | Msa1198970:CDS | 40.0% | |
| CAGAGAACAAACAGAGGATT+TGG | - | chr8_1:50820420-50820439 | Msa1198970:CDS | 40.0% | |
| !! | TTATCCGGCCATTTTCTTAG+TGG | - | chr8_1:50820532-50820551 | Msa1198970:CDS | 40.0% |
| !! | TATCCGGCCATTTTCTTAGT+GGG | - | chr8_1:50820533-50820552 | Msa1198970:CDS | 40.0% |
| TTCCTTGCCCACTAAGAAAA+TGG | + | chr8_1:50820543-50820562 | None:intergenic | 40.0% | |
| !! | GTTTGAGAAGGTGTTGTCAA+AGG | + | chr8_1:50820586-50820605 | None:intergenic | 40.0% |
| AGAAAATGCAATCCAGAAGG+TGG | - | chr8_1:50820658-50820677 | Msa1198970:intron | 40.0% | |
| GCAGAAAAGATGATCAAAGG+TGG | - | chr8_1:50820715-50820734 | Msa1198970:intron | 40.0% | |
| ! | ATTGAGCTTTATAAGGGCCT+AGG | - | chr8_1:50820742-50820761 | Msa1198970:intron | 40.0% |
| !! | TTTGCTTTTCTGTGACCTGA+AGG | + | chr8_1:50821209-50821228 | None:intergenic | 40.0% |
| GAGTTGCAAAGGATAACTAG+TGG | + | chr8_1:50821406-50821425 | None:intergenic | 40.0% | |
| !! | GGTAACACTTTGAGTTGCAA+AGG | + | chr8_1:50821417-50821436 | None:intergenic | 40.0% |
| CCCAACCACGATTTATAAGA+TGG | - | chr8_1:50821668-50821687 | Msa1198970:intron | 40.0% | |
| GGTTTGTGGACATAAATGGT+GGG | + | chr8_1:50821754-50821773 | None:intergenic | 40.0% | |
| ! | TGGTTTGTGGACATAAATGG+TGG | + | chr8_1:50821755-50821774 | None:intergenic | 40.0% |
| !! | GCTTGGTTTGTGGACATAAA+TGG | + | chr8_1:50821758-50821777 | None:intergenic | 40.0% |
| CACTTATAAACAGGCTTGTG+AGG | + | chr8_1:50821873-50821892 | None:intergenic | 40.0% | |
| CTCACAAGCCTGTTTATAAG+TGG | - | chr8_1:50821871-50821890 | Msa1198970:intron | 40.0% | |
| CACAAGCCTGTTTATAAGTG+GGG | - | chr8_1:50821873-50821892 | Msa1198970:intron | 40.0% | |
| ACAAGCCTGTTTATAAGTGG+GGG | - | chr8_1:50821874-50821893 | Msa1198970:intron | 40.0% | |
| ! | ATTTAATGCTGGTTGTGAGG+GGG | - | chr8_1:50821981-50822000 | Msa1198970:intron | 40.0% |
| ! | ATTTAATGCTGGTTGTGAGG+GGG | - | chr8_1:50821981-50822000 | Msa1198970:intron | 40.0% |
| ATTACAGGTGGTGAAGTTCA+TGG | - | chr8_1:50822558-50822577 | Msa1198970:intron | 40.0% | |
| ! | GGTCCATCTTGTGTTTTCTT+TGG | + | chr8_1:50822810-50822829 | None:intergenic | 40.0% |
| TACAAGGAGCTAGTGACTAA+GGG | + | chr8_1:50822833-50822852 | None:intergenic | 40.0% | |
| ATACAAGGAGCTAGTGACTA+AGG | + | chr8_1:50822834-50822853 | None:intergenic | 40.0% | |
| AAACTGTCTATCCTGTGCTT+AGG | - | chr8_1:50823589-50823608 | Msa1198970:intron | 40.0% | |
| CAATAATGTTGCAGCCATAG+AGG | + | chr8_1:50823774-50823793 | None:intergenic | 40.0% | |
| ATGGCTGCAACATTATTGCA+TGG | - | chr8_1:50823776-50823795 | Msa1198970:CDS | 40.0% | |
| TTTCGAGATAGTTCCGACTA+AGG | - | chr8_1:50823828-50823847 | Msa1198970:CDS | 40.0% | |
| TACAATGTCTATGACTGCTG+TGG | - | chr8_1:50823882-50823901 | Msa1198970:CDS | 40.0% | |
| GCACAAGTTCAATTCCTTCT+TGG | - | chr8_1:50823955-50823974 | Msa1198970:CDS | 40.0% | |
| GCCCCTTCAACATTATATAC+CGG | - | chr8_1:50824150-50824169 | Msa1198970:intron | 40.0% | |
| TCACACAAAGGAAGTGGTAA+CGG | + | chr8_1:50824181-50824200 | None:intergenic | 40.0% | |
| ACCACTTCCTTTGTGTGATA+AGG | - | chr8_1:50824183-50824202 | Msa1198970:intron | 40.0% | |
| TCCTTATCACACAAAGGAAG+TGG | + | chr8_1:50824187-50824206 | None:intergenic | 40.0% | |
| AAGACTATGGATACTGCATG+AGG | - | chr8_1:50824654-50824673 | Msa1198970:intron | 40.0% | |
| AGACTATGGATACTGCATGA+GGG | - | chr8_1:50824655-50824674 | Msa1198970:intron | 40.0% | |
| !! | ATTTCTAGTGTGCAAGGAGA+TGG | - | chr8_1:50824824-50824843 | Msa1198970:intron | 40.0% |
| CAAGGAGATGGTTTGATGAA+GGG | - | chr8_1:50824836-50824855 | Msa1198970:intron | 40.0% | |
| AAGGAGATGGTTTGATGAAG+GGG | - | chr8_1:50824837-50824856 | Msa1198970:intron | 40.0% | |
| TGGGACTTTGTAAAGGATTG+GGG | - | chr8_1:50825006-50825025 | Msa1198970:intron | 40.0% | |
| AAAGGAACTCCAAGAATCCT+TGG | - | chr8_1:50825037-50825056 | Msa1198970:intron | 40.0% | |
| CTTCTGATTGAAGATGTGTC+TGG | - | chr8_1:50825177-50825196 | Msa1198970:intron | 40.0% | |
| TTATCTACGAGACATTGACG+TGG | + | chr8_1:50825326-50825345 | None:intergenic | 40.0% | |
| ACGTCAATGTCTCGTAGATA+AGG | - | chr8_1:50825325-50825344 | Msa1198970:CDS | 40.0% | |
| !! | ACATTACTCTAAGGCTTGCT+TGG | - | chr8_1:50825555-50825574 | Msa1198970:intron | 40.0% |
| GAGGACTATGGAATTTCTAC+AGG | - | chr8_1:50825663-50825682 | Msa1198970:CDS | 40.0% | |
| TCCACTTCATGAAAAGGAAG+TGG | + | chr8_1:50825858-50825877 | None:intergenic | 40.0% | |
| ! | ACTTCCTTTTCATGAAGTGG+AGG | - | chr8_1:50825857-50825876 | Msa1198970:five_prime_UTR | 40.0% |
| TCATCCTCCACTTCATGAAA+AGG | + | chr8_1:50825864-50825883 | None:intergenic | 40.0% | |
| GATTCCACCCAAATACTTGA+AGG | - | chr8_1:50825933-50825952 | Msa1198970:five_prime_UTR | 40.0% | |
| AGGGACAACTCATTCCAGAA+TGG | - | chr8_1:50818578-50818597 | Msa1198970:intron | 45.0% | |
| CTCTTCTCACTATTCCAAGG+AGG | - | chr8_1:50819151-50819170 | Msa1198970:intron | 45.0% | |
| TTCTCACTATTCCAAGGAGG+AGG | - | chr8_1:50819154-50819173 | Msa1198970:intron | 45.0% | |
| ! | GGGTCTAAAATGGTGTGGTT+TGG | - | chr8_1:50819478-50819497 | Msa1198970:CDS | 45.0% |
| ! | TGGTGTGGTTTGGAGAGAAA+TGG | - | chr8_1:50819488-50819507 | Msa1198970:CDS | 45.0% |
| ATGCAGAGGAAGACTCTGTT+AGG | - | chr8_1:50820395-50820414 | Msa1198970:intron | 45.0% | |
| TAGGAGCAGAGAACAAACAG+AGG | - | chr8_1:50820414-50820433 | Msa1198970:CDS | 45.0% | |
| TTGCCCACTAAGAAAATGGC+CGG | + | chr8_1:50820539-50820558 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr8_1:50821647-50821666 | None:intergenic | 45.0% | |
| AGAGCCTCTCCAAGATTCAT+TGG | - | chr8_1:50821695-50821714 | Msa1198970:CDS | 45.0% | |
| GAGCCTCTCCAAGATTCATT+GGG | - | chr8_1:50821696-50821715 | Msa1198970:CDS | 45.0% | |
| TGCTATCAGGTTTCCGCTAT+CGG | - | chr8_1:50821724-50821743 | Msa1198970:CDS | 45.0% | |
| ! | TTGTGGACATAAATGGTGGG+TGG | + | chr8_1:50821751-50821770 | None:intergenic | 45.0% |
| GTGTGTTAAGAGTCCCACAT+CGG | - | chr8_1:50821801-50821820 | Msa1198970:CDS | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr8_1:50821806-50821825 | Msa1198970:CDS | 45.0% | |
| ATAAACAGGCTTGTGAGGTG+AGG | + | chr8_1:50821868-50821887 | None:intergenic | 45.0% | |
| GATTGCCCCCACTTATAAAC+AGG | + | chr8_1:50821611-50821630 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr8_1:50821647-50821666 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+CGG | - | chr8_1:50821801-50821820 | Msa1198970:CDS | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr8_1:50821806-50821825 | Msa1198970:CDS | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+CGG | - | chr8_1:50821801-50821820 | Msa1198970:CDS | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr8_1:50821806-50821825 | Msa1198970:CDS | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr8_1:50821647-50821666 | None:intergenic | 45.0% | |
| CTACACCATCGCTCAATCTT+AGG | + | chr8_1:50822426-50822445 | None:intergenic | 45.0% | |
| GGTGAAGTTCATGGATGAAG+TGG | - | chr8_1:50822567-50822586 | Msa1198970:intron | 45.0% | |
| GAAGTTCATGGATGAAGTGG+AGG | - | chr8_1:50822570-50822589 | Msa1198970:intron | 45.0% | |
| ACAAGGAGCTAGTGACTAAG+GGG | + | chr8_1:50822832-50822851 | None:intergenic | 45.0% | |
| ! | GGATGCTTTTGGGCACTTTT+TGG | - | chr8_1:50823501-50823520 | Msa1198970:intron | 45.0% |
| ATGTCTATGACTGCTGTGGT+TGG | - | chr8_1:50823886-50823905 | Msa1198970:CDS | 45.0% | |
| CCAGAAAAAGTAGGCCAAGA+AGG | + | chr8_1:50823972-50823991 | None:intergenic | 45.0% | |
| !!! | CCTTCTTGGCCTACTTTTTC+TGG | - | chr8_1:50823969-50823988 | Msa1198970:CDS | 45.0% |
| AAGTCCAGCATCAGAACCTA+GGG | + | chr8_1:50824340-50824359 | None:intergenic | 45.0% | |
| AAAGTCCAGCATCAGAACCT+AGG | + | chr8_1:50824341-50824360 | None:intergenic | 45.0% | |
| AACTCTAGGCTCCTTAGCAT+TGG | + | chr8_1:50824596-50824615 | None:intergenic | 45.0% | |
| GCTAAGGAGCCTAGAGTTTA+TGG | - | chr8_1:50824598-50824617 | Msa1198970:intron | 45.0% | |
| GCAAGGAGATGGTTTGATGA+AGG | - | chr8_1:50824835-50824854 | Msa1198970:intron | 45.0% | |
| GTTTCAGCTATGTTAGCTGC+AGG | - | chr8_1:50824892-50824911 | Msa1198970:intron | 45.0% | |
| ! | AGGATTGGGGTTTGCTTCAA+AGG | - | chr8_1:50825019-50825038 | Msa1198970:intron | 45.0% |
| GTCTGGTGTTCGATACATGT+TGG | - | chr8_1:50825194-50825213 | Msa1198970:CDS | 45.0% | |
| ! | TGGCAAGTTTAGAGCAGTGA+AGG | - | chr8_1:50825827-50825846 | Msa1198970:exon | 45.0% |
| ! | GCCACTTCCTTTTCATGAAG+TGG | - | chr8_1:50825854-50825873 | Msa1198970:five_prime_UTR | 45.0% |
| TGCTCCTTCAAGTATTTGGG+TGG | + | chr8_1:50825940-50825959 | None:intergenic | 45.0% | |
| !!! | ATGATATTTTTTTTTTTTTT+TGG | - | chr8_1:50818870-50818889 | Msa1198970:intron | 5.0% |
| !! | TATATATATATATATATGAT+TGG | + | chr8_1:50822312-50822331 | None:intergenic | 5.0% |
| !! | TGGTGGTGGCTAGTTTATGC+AGG | + | chr8_1:50818343-50818362 | None:intergenic | 50.0% |
| GCTTCTCCACTGAGGGAATT+TGG | + | chr8_1:50818372-50818391 | None:intergenic | 50.0% | |
| TGAGACAGATTCCTCCTCCT+TGG | + | chr8_1:50819168-50819187 | None:intergenic | 50.0% | |
| TGTCGGACACTGACACATGT+TGG | - | chr8_1:50819829-50819848 | Msa1198970:intron | 50.0% | |
| !! | GGCCATTTTCTTAGTGGGCA+AGG | - | chr8_1:50820538-50820557 | Msa1198970:CDS | 50.0% |
| GTGGGCAAGGAAAGAATGTG+AGG | - | chr8_1:50820551-50820570 | Msa1198970:CDS | 50.0% | |
| TTGAGGGTCCCACATCGAAT+AGG | - | chr8_1:50821571-50821590 | Msa1198970:intron | 50.0% | |
| GTCCCACATCGAATAGGACA+TGG | - | chr8_1:50821577-50821596 | Msa1198970:intron | 50.0% | |
| GGCCATGTCCTATTCGATGT+GGG | + | chr8_1:50821582-50821601 | None:intergenic | 50.0% | |
| AGGCCATGTCCTATTCGATG+TGG | + | chr8_1:50821583-50821602 | None:intergenic | 50.0% | |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | - | chr8_1:50821634-50821653 | Msa1198970:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | - | chr8_1:50821645-50821664 | Msa1198970:intron | 50.0% |
| TGGCCCAATGAATCTTGGAG+AGG | + | chr8_1:50821702-50821721 | None:intergenic | 50.0% | |
| !! | GATAGCGGAAACCTGATAGC+AGG | + | chr8_1:50821725-50821744 | None:intergenic | 50.0% |
| GCTATCAGGTTTCCGCTATC+GGG | - | chr8_1:50821725-50821744 | Msa1198970:CDS | 50.0% | |
| ! | ACACTGTTGGGCTTGGTTTG+TGG | + | chr8_1:50821768-50821787 | None:intergenic | 50.0% |
| CAAACCAAGCCCAACAGTGT+TGG | - | chr8_1:50821768-50821787 | Msa1198970:CDS | 50.0% | |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | - | chr8_1:50821634-50821653 | Msa1198970:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | - | chr8_1:50821645-50821664 | Msa1198970:intron | 50.0% |
| CTTAGAAATCGTGGTTGGGC+CGG | + | chr8_1:50821938-50821957 | None:intergenic | 50.0% | |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | - | chr8_1:50821634-50821653 | Msa1198970:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | - | chr8_1:50821645-50821664 | Msa1198970:intron | 50.0% |
| TGACGCCTAAGATTGAGCGA+TGG | - | chr8_1:50822418-50822437 | Msa1198970:intron | 50.0% | |
| CAAGGAGCTAGTGACTAAGG+GGG | + | chr8_1:50822831-50822850 | None:intergenic | 50.0% | |
| !!! | GTTTTTAGAACCGGACCAGC+TGG | - | chr8_1:50823656-50823675 | Msa1198970:CDS | 50.0% |
| TGCTCGTACAACTTCGATCG+TGG | + | chr8_1:50823687-50823706 | None:intergenic | 50.0% | |
| ACGATCGAAGTTGTACGAGC+AGG | - | chr8_1:50823686-50823705 | Msa1198970:CDS | 50.0% | |
| ! | TTCTCCCTAGGTTCTGATGC+TGG | - | chr8_1:50824333-50824352 | Msa1198970:intron | 50.0% |
| GGCTGATCAACTTTGCAGTC+AGG | - | chr8_1:50824366-50824385 | Msa1198970:intron | 50.0% | |
| CAGGCACGACACATACATGT+AGG | + | chr8_1:50825293-50825312 | None:intergenic | 50.0% | |
| CTACATGTATGTGTCGTGCC+TGG | - | chr8_1:50825291-50825310 | Msa1198970:CDS | 50.0% | |
| TTGACGTGGATACAGACACC+AGG | + | chr8_1:50825312-50825331 | None:intergenic | 50.0% | |
| ! | GATCATATCCGGTGGCGGTT+TGG | - | chr8_1:50818310-50818329 | Msa1198970:three_prime_UTR | 55.0% |
| GAAAGTGACCAAACCGCCAC+CGG | + | chr8_1:50818321-50818340 | None:intergenic | 55.0% | |
| ACACGAAGCACACCACCTTC+TGG | + | chr8_1:50820673-50820692 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | - | chr8_1:50821625-50821644 | Msa1198970:intron | 55.0% | |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr8_1:50821633-50821652 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | - | chr8_1:50821633-50821652 | Msa1198970:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | chr8_1:50821635-50821654 | Msa1198970:intron | 55.0% |
| GCAGGTGGCCCAATGAATCT+TGG | + | chr8_1:50821707-50821726 | None:intergenic | 55.0% | |
| TCATTGGGCCACCTGCTATC+AGG | - | chr8_1:50821711-50821730 | Msa1198970:CDS | 55.0% | |
| AGCGGAAACCTGATAGCAGG+TGG | + | chr8_1:50821722-50821741 | None:intergenic | 55.0% | |
| ACGACCAACACTGTTGGGCT+TGG | + | chr8_1:50821775-50821794 | None:intergenic | 55.0% | |
| CCCTCACGACCAACACTGTT+GGG | + | chr8_1:50821780-50821799 | None:intergenic | 55.0% | |
| !! | CCCAACAGTGTTGGTCGTGA+GGG | - | chr8_1:50821777-50821796 | Msa1198970:CDS | 55.0% |
| !! | CCAACAGTGTTGGTCGTGAG+GGG | - | chr8_1:50821778-50821797 | Msa1198970:CDS | 55.0% |
| !! | CAACAGTGTTGGTCGTGAGG+GGG | - | chr8_1:50821779-50821798 | Msa1198970:CDS | 55.0% |
| GTCCCACATCGGATAGGACA+TGG | - | chr8_1:50821812-50821831 | Msa1198970:intron | 55.0% | |
| GGCCATGTCCTATCCGATGT+GGG | + | chr8_1:50821817-50821836 | None:intergenic | 55.0% | |
| AGGCCATGTCCTATCCGATG+TGG | + | chr8_1:50821818-50821837 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | - | chr8_1:50821625-50821644 | Msa1198970:intron | 55.0% | |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr8_1:50821633-50821652 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | - | chr8_1:50821633-50821652 | Msa1198970:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | chr8_1:50821635-50821654 | Msa1198970:intron | 55.0% |
| GTCCCACATCGGATAGGACA+TGG | - | chr8_1:50821812-50821831 | Msa1198970:intron | 55.0% | |
| GGCCATGTCCTATCCGATGT+GGG | + | chr8_1:50821817-50821836 | None:intergenic | 55.0% | |
| CACATCGGATAGGACATGGC+CGG | - | chr8_1:50821816-50821835 | Msa1198970:intron | 55.0% | |
| GTCCCACATCGGATAGGACA+TGG | - | chr8_1:50821812-50821831 | Msa1198970:intron | 55.0% | |
| GGCCATGTCCTATCCGATGT+GGG | + | chr8_1:50821817-50821836 | None:intergenic | 55.0% | |
| AGGCCATGTCCTATCCGATG+TGG | + | chr8_1:50821818-50821837 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | - | chr8_1:50821625-50821644 | Msa1198970:intron | 55.0% | |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr8_1:50821633-50821652 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | - | chr8_1:50821633-50821652 | Msa1198970:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | chr8_1:50821635-50821654 | Msa1198970:intron | 55.0% |
| TCGATCGTGGTTGAACCAGC+TGG | + | chr8_1:50823674-50823693 | None:intergenic | 55.0% | |
| !! | GGAAGTGGTAACGGCTTGAC+CGG | + | chr8_1:50824172-50824191 | None:intergenic | 55.0% |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | chr8_1:50821638-50821657 | None:intergenic | 60.0% |
| !! | AATGGTGGGTGGCCCGATAG+CGG | + | chr8_1:50821740-50821759 | None:intergenic | 60.0% |
| !! | GCCCAACAGTGTTGGTCGTG+AGG | - | chr8_1:50821776-50821795 | Msa1198970:CDS | 60.0% |
| CCCCTCACGACCAACACTGT+TGG | + | chr8_1:50821781-50821800 | None:intergenic | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | chr8_1:50821638-50821657 | None:intergenic | 60.0% |
| CGGCCATGTCCTATCCGATG+TGG | + | chr8_1:50822020-50822039 | None:intergenic | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | chr8_1:50821638-50821657 | None:intergenic | 60.0% |
| CGTGGTTGAACCAGCTGGTC+CGG | + | chr8_1:50823669-50823688 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 50818308 | 50826083 | 50818308 | ID=Msa1198970;Name=Msa1198970 |
| chr8_1 | mRNA | 50818308 | 50826083 | 50818308 | ID=Msa1198970-mRNA-1;Parent=Msa1198970;Name=Msa1198970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=245|1|1|1|1|1|14|190|781 |
| chr8_1 | exon | 50818308 | 50818591 | 50818308 | ID=Msa1198970-mRNA-1:exon:16058;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50818707 | 50818843 | 50818707 | ID=Msa1198970-mRNA-1:exon:16057;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50819281 | 50819559 | 50819281 | ID=Msa1198970-mRNA-1:exon:16056;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50819649 | 50819801 | 50819649 | ID=Msa1198970-mRNA-1:exon:16055;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50820004 | 50820048 | 50820004 | ID=Msa1198970-mRNA-1:exon:16054;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50820159 | 50820263 | 50820159 | ID=Msa1198970-mRNA-1:exon:16053;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50820401 | 50820650 | 50820401 | ID=Msa1198970-mRNA-1:exon:16052;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50820781 | 50820901 | 50820781 | ID=Msa1198970-mRNA-1:exon:16051;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50821694 | 50821826 | 50821694 | ID=Msa1198970-mRNA-1:exon:16050;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50823107 | 50823178 | 50823107 | ID=Msa1198970-mRNA-1:exon:16049;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50823279 | 50823327 | 50823279 | ID=Msa1198970-mRNA-1:exon:16048;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50823609 | 50823990 | 50823609 | ID=Msa1198970-mRNA-1:exon:16047;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50825185 | 50825488 | 50825185 | ID=Msa1198970-mRNA-1:exon:16046;Parent=Msa1198970-mRNA-1 |
| chr8_1 | exon | 50825617 | 50826083 | 50825617 | ID=Msa1198970-mRNA-1:exon:16045;Parent=Msa1198970-mRNA-1 |
| chr8_1 | five_prime_UTR | 50825839 | 50826083 | 50825839 | ID=Msa1198970-mRNA-1:five_prime_utr;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50825617 | 50825838 | 50825617 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50825185 | 50825488 | 50825185 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50823609 | 50823990 | 50823609 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50823279 | 50823327 | 50823279 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50823107 | 50823178 | 50823107 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50821694 | 50821826 | 50821694 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50820781 | 50820901 | 50820781 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50820401 | 50820650 | 50820401 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50820159 | 50820263 | 50820159 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50820004 | 50820048 | 50820004 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50819649 | 50819801 | 50819649 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50819281 | 50819559 | 50819281 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50818707 | 50818843 | 50818707 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | CDS | 50818498 | 50818591 | 50818498 | ID=Msa1198970-mRNA-1:cds;Parent=Msa1198970-mRNA-1 |
| chr8_1 | three_prime_UTR | 50818308 | 50818497 | 50818308 | ID=Msa1198970-mRNA-1:three_prime_utr;Parent=Msa1198970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
