Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426230 | XP_013446199.1 | 99.104 | 781 | 7 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426230 | sp|Q93ZF5|PHO11_ARATH | 67.970 | 793 | 233 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426230 | A0A072TSP3 | 99.104 | 781 | 7 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007370 | Msa1426230 | 0.802019 | 6.843566e-49 | -8.615850e-47 |
| Msa1252500 | Msa1426230 | 0.850553 | 1.576066e-60 | -8.615850e-47 |
| Msa1198970 | Msa1426230 | 0.825089 | 5.667762e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426230 | MtrunA17_Chr8g0368741 | 99.104 | 781 | 7 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1613 |
| Msa1426230 | MtrunA17_Chr1g0187381 | 47.044 | 795 | 381 | 9 | 1 | 779 | 54 | 824 | 0.0 | 726 |
| Msa1426230 | MtrunA17_Chr1g0166651 | 45.823 | 790 | 399 | 7 | 1 | 779 | 1 | 772 | 0.0 | 698 |
| Msa1426230 | MtrunA17_Chr2g0302531 | 35.230 | 826 | 458 | 25 | 2 | 781 | 1 | 795 | 3.42e-146 | 448 |
| Msa1426230 | MtrunA17_Chr5g0417841 | 34.005 | 794 | 462 | 16 | 4 | 779 | 3 | 752 | 6.07e-145 | 444 |
| Msa1426230 | MtrunA17_Chr7g0217801 | 35.995 | 814 | 452 | 22 | 2 | 781 | 1 | 779 | 3.42e-144 | 442 |
| Msa1426230 | MtrunA17_Chr7g0217771 | 42.000 | 350 | 193 | 7 | 439 | 781 | 3 | 349 | 4.32e-85 | 274 |
| Msa1426230 | MtrunA17_Chr7g0217821 | 39.542 | 349 | 203 | 5 | 439 | 781 | 3 | 349 | 8.38e-78 | 254 |
| Msa1426230 | MtrunA17_Chr7g0217831 | 31.436 | 404 | 233 | 13 | 2 | 388 | 1 | 377 | 8.89e-39 | 148 |
| Msa1426230 | MtrunA17_Chr2g0322931 | 30.060 | 336 | 214 | 11 | 432 | 755 | 111 | 437 | 6.34e-25 | 108 |
| Msa1426230 | MtrunA17_Chr7g0217781 | 38.217 | 157 | 82 | 3 | 232 | 388 | 46 | 187 | 3.11e-22 | 95.5 |
| Msa1426230 | MtrunA17_Chr7g0246941 | 28.955 | 335 | 219 | 12 | 432 | 755 | 76 | 402 | 1.29e-20 | 95.5 |
| Msa1426230 | MtrunA17_Chr7g0217791 | 31.915 | 188 | 113 | 6 | 2 | 179 | 1 | 183 | 3.86e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426230 | AT1G68740.1 | 67.970 | 793 | 233 | 11 | 1 | 781 | 1 | 784 | 0.0 | 1050 |
| Msa1426230 | AT1G68740.2 | 65.877 | 718 | 225 | 10 | 1 | 706 | 1 | 710 | 0.0 | 918 |
| Msa1426230 | AT3G23430.1 | 45.714 | 805 | 375 | 13 | 1 | 773 | 1 | 775 | 0.0 | 703 |
| Msa1426230 | AT1G26730.1 | 37.786 | 786 | 443 | 15 | 2 | 780 | 1 | 747 | 4.95e-152 | 462 |
| Msa1426230 | AT3G29060.1 | 35.322 | 838 | 435 | 18 | 2 | 776 | 1 | 794 | 1.59e-151 | 462 |
| Msa1426230 | AT1G35350.1 | 36.226 | 795 | 444 | 19 | 2 | 780 | 1 | 748 | 1.41e-149 | 456 |
| Msa1426230 | AT1G14040.1 | 35.119 | 840 | 454 | 20 | 2 | 780 | 1 | 810 | 2.44e-147 | 452 |
| Msa1426230 | AT4G25350.1 | 35.019 | 791 | 452 | 11 | 2 | 780 | 1 | 741 | 1.06e-145 | 446 |
| Msa1426230 | AT1G69480.2 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 1.77e-140 | 433 |
| Msa1426230 | AT1G69480.1 | 34.582 | 801 | 461 | 18 | 2 | 774 | 1 | 766 | 1.77e-140 | 433 |
| Msa1426230 | AT2G03260.1 | 33.693 | 834 | 468 | 17 | 2 | 780 | 1 | 804 | 8.07e-136 | 422 |
| Msa1426230 | AT2G03240.1 | 33.213 | 834 | 488 | 18 | 2 | 780 | 1 | 820 | 8.71e-132 | 412 |
| Msa1426230 | AT1G35350.2 | 41.715 | 513 | 293 | 6 | 271 | 780 | 55 | 564 | 2.93e-128 | 394 |
| Msa1426230 | AT2G03260.2 | 37.274 | 609 | 347 | 10 | 189 | 780 | 1 | 591 | 1.27e-125 | 389 |
| Msa1426230 | AT1G26730.2 | 35.097 | 718 | 420 | 15 | 2 | 712 | 1 | 679 | 2.63e-117 | 370 |
| Msa1426230 | AT2G03250.1 | 32.789 | 735 | 431 | 17 | 2 | 715 | 1 | 693 | 1.53e-105 | 340 |
| Msa1426230 | AT2G03250.2 | 31.260 | 627 | 373 | 15 | 2 | 612 | 1 | 585 | 6.97e-76 | 257 |
| Msa1426230 | AT2G32295.1 | 28.493 | 365 | 236 | 16 | 432 | 781 | 98 | 452 | 5.18e-25 | 109 |
| Msa1426230 | AT2G32295.2 | 28.493 | 365 | 236 | 16 | 432 | 781 | 98 | 452 | 5.18e-25 | 109 |
| Msa1426230 | AT5G35730.1 | 28.729 | 362 | 229 | 12 | 432 | 781 | 102 | 446 | 2.72e-23 | 104 |
Find 167 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGCTCCTTCAAGTATT+TGG | 0.098484 | tig0025956:-55684 | None:intergenic |
| GAACTCATTTGATGATTATT+TGG | 0.164431 | tig0025956:-47888 | None:intergenic |
| TGTCCTTTCTGCCATATTAT+TGG | 0.182093 | tig0025956:+54435 | Msa1426230:CDS |
| GCTTCTCCACTGAGGGAATT+TGG | 0.194566 | tig0025956:-47578 | None:intergenic |
| ACAAAAGCTTCTTTCCATTC+TGG | 0.212257 | tig0025956:-47801 | None:intergenic |
| GCTAAGGAGCCTAGAGTTTA+TGG | 0.215307 | tig0025956:+54325 | Msa1426230:CDS |
| TATTAACCTTATTGAGGTTT+TGG | 0.228739 | tig0025956:-48209 | None:intergenic |
| TTTCTACATTTCTTCCTCTA+TGG | 0.229554 | tig0025956:+53571 | Msa1426230:CDS |
| GACTATTTACTGGATGCTTT+TGG | 0.234826 | tig0025956:+53303 | Msa1426230:CDS |
| TTCCTTGCCCACTAAGAAAA+TGG | 0.237152 | tig0025956:-49736 | None:intergenic |
| TTTCCATGTAGACTGAATTT+TGG | 0.245627 | tig0025956:-53382 | None:intergenic |
| AATTTGGTCACCTCTTTATA+AGG | 0.256825 | tig0025956:+54025 | Msa1426230:CDS |
| GCACAAGTTCAATTCCTTCT+TGG | 0.261445 | tig0025956:+53769 | Msa1426230:CDS |
| GAGAAAGAGTTTCTTGATAG+AGG | 0.262919 | tig0025956:+48249 | Msa1426230:CDS |
| ATGGCATGTTACTATATAAC+TGG | 0.266181 | tig0025956:+54344 | Msa1426230:CDS |
| TGGTTTCATTGAGCTTTATA+AGG | 0.272211 | tig0025956:+49931 | Msa1426230:CDS |
| TTGGGACTTTGTAAGGGATT+GGG | 0.277186 | tig0025956:+54751 | Msa1426230:CDS |
| ATAAATTCAGGACTATTTAC+TGG | 0.286750 | tig0025956:+53293 | Msa1426230:intron |
| ATTTCTTAACCAAGGATTCT+TGG | 0.294130 | tig0025956:-54792 | None:intergenic |
| CACAAGATGGTGTTATATAT+TGG | 0.297048 | tig0025956:-47679 | None:intergenic |
| GTGTGATAAGGAACATAATT+TGG | 0.298051 | tig0025956:+54009 | Msa1426230:CDS |
| ACAAGAACAAAGAGAGAAAA+TGG | 0.299855 | tig0025956:+47743 | Msa1426230:exon |
| CATGCAATTACTTTCTTCAT+TGG | 0.303322 | tig0025956:+51168 | Msa1426230:CDS |
| AATTGTATTGGGACTTTGTA+AGG | 0.308439 | tig0025956:+54744 | Msa1426230:CDS |
| CAGAGAACAAACAGAGGATT+TGG | 0.309805 | tig0025956:+49616 | Msa1426230:CDS |
| AACTTTCTTAGTGATGAAAA+AGG | 0.319449 | tig0025956:-47924 | None:intergenic |
| ACACGAAGCACACCACCTTC+TGG | 0.324304 | tig0025956:-49866 | None:intergenic |
| ATCTGCTCCTTCAAGTATTT+GGG | 0.324691 | tig0025956:-55683 | None:intergenic |
| TGAGCTCAAATCTGCATTCA+TGG | 0.325797 | tig0025956:+48305 | Msa1426230:CDS |
| TAGGATATTTGAATGATTAT+AGG | 0.326678 | tig0025956:+49957 | Msa1426230:CDS |
| AACTTTGTACCAATTGTATT+GGG | 0.326926 | tig0025956:+54733 | Msa1426230:CDS |
| TGCATTGCTCTCCAATAATA+TGG | 0.328656 | tig0025956:-54446 | None:intergenic |
| CAACTTTGTACCAATTGTAT+TGG | 0.332482 | tig0025956:+54732 | Msa1426230:CDS |
| TTTAGACCAAAACCTCAATA+AGG | 0.348820 | tig0025956:+48203 | Msa1426230:CDS |
| AGTTTACTTGAATTGGTTCA+TGG | 0.350770 | tig0025956:-47968 | None:intergenic |
| CTGAGGGAATTTGGAAGATA+TGG | 0.351796 | tig0025956:-47569 | None:intergenic |
| TGGGACTTTGTAAGGGATTG+GGG | 0.360028 | tig0025956:+54752 | Msa1426230:CDS |
| TCAACTACTTTGAGATAGAT+TGG | 0.368425 | tig0025956:-50434 | None:intergenic |
| ATAAATCAATGGATTTGAAA+TGG | 0.376768 | tig0025956:+49684 | Msa1426230:CDS |
| CACAAGTCACCTTATCAATC+TGG | 0.378543 | tig0025956:+54607 | Msa1426230:CDS |
| TTCTCCCTAGGTTCTTATGC+TGG | 0.380374 | tig0025956:+54147 | Msa1426230:intron |
| TTTACAGGTGGTGAAGTTCA+TGG | 0.380995 | tig0025956:+51050 | Msa1426230:intron |
| AGAAATTAGTTACCTTGTAA+TGG | 0.385123 | tig0025956:+49808 | Msa1426230:CDS |
| ACCACTTCCTTTGTGTGATA+AGG | 0.390771 | tig0025956:+53997 | Msa1426230:CDS |
| TAGCATCAGTGTCAGCAAAT+TGG | 0.391037 | tig0025956:-48161 | None:intergenic |
| AAGTTATTAGAAGAGGACTA+TGG | 0.394611 | tig0025956:+55393 | Msa1426230:CDS |
| ATTGGGACTTTGTAAGGGAT+TGG | 0.402051 | tig0025956:+54750 | Msa1426230:CDS |
| CATTTGACTCTACTCACAAA+AGG | 0.402742 | tig0025956:+53736 | Msa1426230:CDS |
| AGAAAGAGTTTCTTGATAGA+GGG | 0.409944 | tig0025956:+48250 | Msa1426230:CDS |
| TAAATCAATGGATTTGAAAT+GGG | 0.413347 | tig0025956:+49685 | Msa1426230:CDS |
| AAGGTAACTAATTTCTGAAA+AGG | 0.416741 | tig0025956:-49801 | None:intergenic |
| TCATCCACATTCTCTATTAA+CGG | 0.416803 | tig0025956:+48381 | Msa1426230:CDS |
| CATATTTAGCATTTGATGTA+GGG | 0.422345 | tig0025956:+55650 | Msa1426230:three_prime_UTR |
| TCATCCTCCACTTCATGAAA+AGG | 0.425572 | tig0025956:-55601 | None:intergenic |
| ATTGAGCTTTATAAGGGCCT+AGG | 0.431124 | tig0025956:+49938 | Msa1426230:CDS |
| ACATTACTCTGAGGCTTGCT+TGG | 0.433030 | tig0025956:+55297 | Msa1426230:CDS |
| AGCTATAAGACTCAAGACTA+TGG | 0.433500 | tig0025956:+54368 | Msa1426230:CDS |
| GATCATATCCGGTGGCGGTT+TGG | 0.436146 | tig0025956:+47519 | Msa1426230:five_prime_UTR |
| GGTTTCATTGAGCTTTATAA+GGG | 0.440025 | tig0025956:+49932 | Msa1426230:CDS |
| ATAAGGTTAATAAATTCTAT+AGG | 0.440648 | tig0025956:+48220 | Msa1426230:CDS |
| GAAATTCTCTAAGCAATTTG+AGG | 0.442628 | tig0025956:+47767 | Msa1426230:CDS |
| GCATATTTAGCATTTGATGT+AGG | 0.449207 | tig0025956:+55649 | Msa1426230:three_prime_UTR |
| CATATTTGCCCAGATTGATA+AGG | 0.449824 | tig0025956:-54616 | None:intergenic |
| GGCTGATCAACTTTGCAGTC+AGG | 0.450379 | tig0025956:+54180 | Msa1426230:CDS |
| TTACAAAGTCCCAATACAAT+TGG | 0.458613 | tig0025956:-54742 | None:intergenic |
| TGATTATTGGCAACTTAAGA+AGG | 0.460532 | tig0025956:+47824 | Msa1426230:CDS |
| GAAAGAGTTTCTTGATAGAG+GGG | 0.460793 | tig0025956:+48251 | Msa1426230:CDS |
| TTCATGGATAAGAAAGGTAA+AGG | 0.465006 | tig0025956:+48321 | Msa1426230:CDS |
| CTTGTTTCATCAACTAGTAA+AGG | 0.467786 | tig0025956:+48111 | Msa1426230:CDS |
| AGAATTTATTAACCTTATTG+AGG | 0.469370 | tig0025956:-48215 | None:intergenic |
| AAAGGAACTCCAAGAATCCT+TGG | 0.469620 | tig0025956:+54783 | Msa1426230:CDS |
| TTTCGAGATAGTTCCAACTA+AGG | 0.469743 | tig0025956:+53642 | Msa1426230:CDS |
| ATGCAGAGGAAGACTCTGTT+AGG | 0.473028 | tig0025956:+49591 | Msa1426230:intron |
| ACCGGTATATAATGTTGAAC+GGG | 0.474302 | tig0025956:-53965 | None:intergenic |
| CAAATGCTAAATATGCCAAT+TGG | 0.482039 | tig0025956:-55642 | None:intergenic |
| CTGTACTTTAGTTCCTTAGT+TGG | 0.482476 | tig0025956:-53655 | None:intergenic |
| TGAGACAGATTCCTCCTCCT+TGG | 0.484421 | tig0025956:-48361 | None:intergenic |
| CTTTAAAGGTTCCAATGCTA+AGG | 0.487227 | tig0025956:+54309 | Msa1426230:intron |
| AGACTAATAATAATGCCAAT+TGG | 0.489558 | tig0025956:+55627 | Msa1426230:exon |
| ATTTCTAGTGTGCAAGGAGA+TGG | 0.490178 | tig0025956:+54570 | Msa1426230:intron |
| AACTCTAGGCTCCTTAGCAT+TGG | 0.493715 | tig0025956:-54320 | None:intergenic |
| GGAAGTGGTATCGGCTTGAC+CGG | 0.496093 | tig0025956:-53983 | None:intergenic |
| GGTAAATTGAGGACATTATC+CGG | 0.496131 | tig0025956:+49713 | Msa1426230:CDS |
| ATATTATTGGAGAGCAATGC+AGG | 0.496213 | tig0025956:+54448 | Msa1426230:CDS |
| AGCTATTTACTACTTGTCAA+TGG | 0.497208 | tig0025956:+54835 | Msa1426230:CDS |
| TATAATCATTCAAATATCCT+AGG | 0.503873 | tig0025956:-49955 | None:intergenic |
| GTTTCAGCTATGTTAGCTGC+AGG | 0.508558 | tig0025956:+54638 | Msa1426230:CDS |
| ATCAATTCATTTCTTAACCA+AGG | 0.508898 | tig0025956:-54800 | None:intergenic |
| TCATGGATAAGAAAGGTAAA+GGG | 0.512773 | tig0025956:+48322 | Msa1426230:CDS |
| ATTTGACTCTACTCACAAAA+GGG | 0.513008 | tig0025956:+53737 | Msa1426230:CDS |
| GGCTGTGAAGTGATCATATC+CGG | 0.514317 | tig0025956:+47508 | None:intergenic |
| GAGGACTATGGAATTTCTAC+AGG | 0.514396 | tig0025956:+55405 | Msa1426230:CDS |
| GCACTTGAAGTTATTAGAAG+AGG | 0.514485 | tig0025956:+55386 | Msa1426230:CDS |
| TGAACAAATCTTCCATTACA+AGG | 0.514803 | tig0025956:-49820 | None:intergenic |
| CATGAGCATCTAAATAATGC+TGG | 0.518926 | tig0025956:+55547 | Msa1426230:CDS |
| GTTTGAGAAGGTGTTGTCAA+AGG | 0.521767 | tig0025956:-49779 | None:intergenic |
| GGGATTGGGGTTTGTTACAA+AGG | 0.525459 | tig0025956:+54765 | Msa1426230:CDS |
| ATGGATTTGAAATGGGAAGA+TGG | 0.530453 | tig0025956:+49692 | Msa1426230:CDS |
| AAATTCTCTAAGCAATTTGA+GGG | 0.530514 | tig0025956:+47768 | Msa1426230:CDS |
| TGCTAAAGGAGATCATAGAA+AGG | 0.536929 | tig0025956:+51104 | Msa1426230:CDS |
| ACACCAAAATTCAGTCTACA+TGG | 0.537834 | tig0025956:+53379 | Msa1426230:CDS |
| AATTTGATTTCTAGTGTGCA+AGG | 0.539390 | tig0025956:+54564 | Msa1426230:intron |
| TGTTTACATCAACTTGAATG+AGG | 0.540287 | tig0025956:-55713 | None:intergenic |
| AAATGAAGAGGATAAATCAA+TGG | 0.543222 | tig0025956:+49673 | Msa1426230:CDS |
| ATTACCGTTAATAGAGAATG+TGG | 0.545235 | tig0025956:-48385 | None:intergenic |
| AGGGACAACTCATTCCAGAA+TGG | 0.545665 | tig0025956:+47787 | Msa1426230:CDS |
| ATTTCTGAAAAGGTTTGAGA+AGG | 0.545715 | tig0025956:-49791 | None:intergenic |
| GAATCTTTATAAATGCAAGC+AGG | 0.546938 | tig0025956:-50268 | None:intergenic |
| CAATAATGTTGCAGCCATAG+AGG | 0.547217 | tig0025956:-53585 | None:intergenic |
| GATTCCACCCAAATACTTGA+AGG | 0.553366 | tig0025956:+55676 | Msa1426230:three_prime_UTR |
| TTCTCACTATTCCAAGGAGG+AGG | 0.553993 | tig0025956:+48350 | Msa1426230:CDS |
| AGTAACATGCCATAAACTCT+AGG | 0.555517 | tig0025956:-54334 | None:intergenic |
| TCTGCATTCATGGATAAGAA+AGG | 0.557752 | tig0025956:+48315 | Msa1426230:CDS |
| TCACACAAAGGAAGTGGTAT+CGG | 0.558786 | tig0025956:-53992 | None:intergenic |
| TGCTCCTTCAAGTATTTGGG+TGG | 0.558848 | tig0025956:-55680 | None:intergenic |
| ATTGTATTGGGACTTTGTAA+GGG | 0.559765 | tig0025956:+54745 | Msa1426230:CDS |
| GCCCGTTCAACATTATATAC+CGG | 0.560241 | tig0025956:+53964 | Msa1426230:CDS |
| GCAAGGAGATGGTTTGATGA+AGG | 0.560927 | tig0025956:+54581 | Msa1426230:CDS |
| GAAAATTGTGTATACATATG+TGG | 0.562177 | tig0025956:-55782 | None:intergenic |
| TTGCCCACTAAGAAAATGGC+CGG | 0.564116 | tig0025956:-49732 | None:intergenic |
| TGGCAAGTTTAGAGCAGTGA+AGG | 0.564530 | tig0025956:+55567 | Msa1426230:CDS |
| TCCTTATCACACAAAGGAAG+TGG | 0.565272 | tig0025956:-53998 | None:intergenic |
| AAACTGTCTACCCTGTGCTT+AGG | 0.566067 | tig0025956:+53402 | Msa1426230:CDS |
| AAGGAGATGGTTTGATGAAG+GGG | 0.566540 | tig0025956:+54583 | Msa1426230:CDS |
| TGGTGGTGGCTAGTTTATGC+AGG | 0.567936 | tig0025956:-47549 | None:intergenic |
| ACAAGTCACCTTATCAATCT+GGG | 0.568694 | tig0025956:+54608 | Msa1426230:CDS |
| TCCACTTCATGAAAAGGAAG+TGG | 0.569024 | tig0025956:-55595 | None:intergenic |
| GACCGGTATATAATGTTGAA+CGG | 0.570809 | tig0025956:-53966 | None:intergenic |
| TGAATCAAATGAAAATGAAG+AGG | 0.574589 | tig0025956:+49661 | Msa1426230:CDS |
| GAAAGTGACCAAACCGCCAC+CGG | 0.576346 | tig0025956:-47527 | None:intergenic |
| ATATTTAGCATTTGATGTAG+GGG | 0.578910 | tig0025956:+55651 | Msa1426230:three_prime_UTR |
| CATGCAGAAAAGATGATCAA+AGG | 0.585159 | tig0025956:+49908 | Msa1426230:CDS |
| TACAATGTCTATGACTGCTG+TGG | 0.588387 | tig0025956:+53696 | Msa1426230:CDS |
| TCTCCAATAATATGGCAGAA+AGG | 0.590845 | tig0025956:-54438 | None:intergenic |
| GCATACAAGTAATAGTAAGA+AGG | 0.594475 | tig0025956:-53943 | None:intergenic |
| AATGGGAAGATGGTAAATTG+AGG | 0.594587 | tig0025956:+49702 | Msa1426230:CDS |
| AAGGAATTGAACTTGTGCAT+AGG | 0.598938 | tig0025956:-53764 | None:intergenic |
| CAAGGAGATGGTTTGATGAA+GGG | 0.600063 | tig0025956:+54582 | Msa1426230:CDS |
| ACTATATGCTTCTCCACTGA+GGG | 0.600576 | tig0025956:-47585 | None:intergenic |
| ATGTCTATGACTGCTGTGGT+TGG | 0.604592 | tig0025956:+53700 | Msa1426230:CDS |
| TGGCATGTTACTATATAACT+GGG | 0.604737 | tig0025956:+54345 | Msa1426230:CDS |
| ATGGCTGCAACATTATTGCA+TGG | 0.604892 | tig0025956:+53590 | Msa1426230:CDS |
| AGGGAATTTGGAAGATATGG+TGG | 0.609626 | tig0025956:-47566 | None:intergenic |
| GAACTCTTCTCACTATTCCA+AGG | 0.613505 | tig0025956:+48344 | Msa1426230:CDS |
| AAGACTATGGATACTGCATG+AGG | 0.618783 | tig0025956:+54381 | Msa1426230:CDS |
| GAATTTGGAAGATATGGTGG+TGG | 0.621088 | tig0025956:-47563 | None:intergenic |
| GGTGAAGTTCATGGACGAAG+TGG | 0.623365 | tig0025956:+51059 | Msa1426230:CDS |
| GAAGTTCATGGACGAAGTGG+AGG | 0.627533 | tig0025956:+51062 | Msa1426230:CDS |
| TGCTTCGTGTTAATAAAACA+AGG | 0.630774 | tig0025956:+49879 | Msa1426230:CDS |
| GAAGTGATCATATCCGGTGG+CGG | 0.632061 | tig0025956:+47514 | None:intergenic |
| TAATCATCAAATGAGTTCAG+TGG | 0.642708 | tig0025956:+47893 | Msa1426230:CDS |
| TCAAGAAAATGCAATCCAGA+AGG | 0.642722 | tig0025956:+49851 | Msa1426230:CDS |
| AGAAAATGCAATCCAGAAGG+TGG | 0.643834 | tig0025956:+49854 | Msa1426230:CDS |
| TAATAAATTCTATAGGACAA+AGG | 0.644773 | tig0025956:+48227 | Msa1426230:CDS |
| TACTATATGCTTCTCCACTG+AGG | 0.646438 | tig0025956:-47586 | None:intergenic |
| GTGGGCAAGGAAAGAATGTG+AGG | 0.650577 | tig0025956:+49747 | Msa1426230:CDS |
| GCAGAAAAGATGATCAAAGG+TGG | 0.655712 | tig0025956:+49911 | Msa1426230:CDS |
| TTATGTTCCTTATCACACAA+AGG | 0.659762 | tig0025956:-54004 | None:intergenic |
| TATCTTCCAAATTCCCTCAG+TGG | 0.667629 | tig0025956:+47572 | Msa1426230:five_prime_UTR |
| GATTCTGAAGAAATTTGACA+AGG | 0.671965 | tig0025956:+50286 | Msa1426230:CDS |
| AGACTATGGATACTGCATGA+GGG | 0.676026 | tig0025956:+54382 | Msa1426230:CDS |
| AGGTATTAAACATTACTCTG+AGG | 0.690644 | tig0025956:+55288 | Msa1426230:intron |
| CTCTTCTCACTATTCCAAGG+AGG | 0.702664 | tig0025956:+48347 | Msa1426230:CDS |
| ATATTTCAACAACTCAGACA+AGG | 0.704761 | tig0025956:+50463 | Msa1426230:CDS |
| TAGGAGCAGAGAACAAACAG+AGG | 0.705511 | tig0025956:+49610 | Msa1426230:CDS |
| TGTGAAGTGATCATATCCGG+TGG | 0.747621 | tig0025956:+47511 | None:intergenic |
| GTGTTGAATGAAACACAAGA+TGG | 0.769647 | tig0025956:-47692 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATGATATTTTTATTTTT+TGG | + | tig0025956:48066-48085 | Msa1426230:intron | 10.0% |
| !!! | TTTATTTTTTGGAATTTTAT+AGG | + | tig0025956:48077-48096 | Msa1426230:intron | 10.0% |
| !! | TAAGTTGTATTTATTTAAAT+AGG | + | tig0025956:48653-48672 | Msa1426230:intron | 10.0% |
| !! | AAGTTGTATTTATTTAAATA+GGG | + | tig0025956:48654-48673 | Msa1426230:intron | 10.0% |
| !! | ATTTGAAAATTATCATAAAA+AGG | + | tig0025956:48779-48798 | Msa1426230:intron | 10.0% |
| !!! | AATATTTTTACAGAATTTAT+AGG | + | tig0025956:50751-50770 | Msa1426230:intron | 10.0% |
| !! | AATAAAAATGAAAAAAAATC+TGG | + | tig0025956:51732-51751 | Msa1426230:intron | 10.0% |
| !! | ATCTAATAAAATGAAAAATA+AGG | + | tig0025956:51806-51825 | Msa1426230:intron | 10.0% |
| !! | TCTAATAAAATGAAAAATAA+GGG | + | tig0025956:51807-51826 | Msa1426230:intron | 10.0% |
| !! | ATATATACTAATCAAAATTT+CGG | + | tig0025956:52148-52167 | Msa1426230:intron | 10.0% |
| !! | AAAAAAAGATTAAAAAATTC+TGG | - | tig0025956:52448-52467 | None:intergenic | 10.0% |
| !! | AAAAAAAATTGAAAAAATTC+TGG | - | tig0025956:52521-52540 | None:intergenic | 10.0% |
| !! | AGAATAAAAAATTACATAAA+GGG | - | tig0025956:52763-52782 | None:intergenic | 10.0% |
| !! | AAGAATAAAAAATTACATAA+AGG | - | tig0025956:52764-52783 | None:intergenic | 10.0% |
| !!! | AAAATGTTTGATTTTTTTAT+TGG | + | tig0025956:53216-53235 | Msa1426230:intron | 10.0% |
| !! | AAAAAAAAGTTTACTTGAAT+TGG | - | tig0025956:47978-47997 | None:intergenic | 15.0% |
| !! | ATAAGGTTAATAAATTCTAT+AGG | + | tig0025956:48220-48239 | Msa1426230:CDS | 15.0% |
| !!! | CTATTTTATTAAACTATTAC+AGG | - | tig0025956:48960-48979 | None:intergenic | 15.0% |
| !! | CATTTAAAGATATATATGAT+TGG | - | tig0025956:50835-50854 | None:intergenic | 15.0% |
| !! | AGAAAAAGTGAAAATAATAA+AGG | - | tig0025956:51208-51227 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTTTCAAGTTCA+GGG | - | tig0025956:51607-51626 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTTCAAGTTC+AGG | - | tig0025956:51608-51627 | None:intergenic | 15.0% |
| !! | CTGAAAAAATTTAAAAAATC+TGG | + | tig0025956:51856-51875 | Msa1426230:intron | 15.0% |
| !! | GAAAAATAATGAAAAAATTC+TGG | - | tig0025956:52247-52266 | None:intergenic | 15.0% |
| !! | CTGAAAAAATTTAAAAATTC+AGG | - | tig0025956:52344-52363 | None:intergenic | 15.0% |
| !! | AGAAAAAAAATTAAAAAAGC+TGG | - | tig0025956:52391-52410 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTTTTCAAGTTC+AGG | + | tig0025956:52535-52554 | Msa1426230:intron | 15.0% |
| !!! | TTTTTAATTTTTCAAGTTCA+GGG | + | tig0025956:52536-52555 | Msa1426230:intron | 15.0% |
| !!! | CTTCTTTTTTTAATAACAAA+AGG | + | tig0025956:52781-52800 | Msa1426230:intron | 15.0% |
| !! | TGAATTTGTAAAATAGAATA+TGG | - | tig0025956:53072-53091 | None:intergenic | 15.0% |
| !! | ATCATGTAACTATTAATATA+AGG | - | tig0025956:54287-54306 | None:intergenic | 15.0% |
| !! | CATATTTCATAATTGAAAAA+AGG | - | tig0025956:54527-54546 | None:intergenic | 15.0% |
| !!! | AATATTTTATTTGTTCAGAT+TGG | + | tig0025956:55522-55541 | Msa1426230:intron | 15.0% |
| !!! | ATGATTATTTGGTTTTTTGT+TGG | - | tig0025956:47880-47899 | None:intergenic | 20.0% |
| !! | AGAATTTATTAACCTTATTG+AGG | - | tig0025956:48218-48237 | None:intergenic | 20.0% |
| !! | TAATAAATTCTATAGGACAA+AGG | + | tig0025956:48227-48246 | Msa1426230:CDS | 20.0% |
| !!! | AATATCCATTTGTTTTTTCA+AGG | - | tig0025956:48280-48299 | None:intergenic | 20.0% |
| !! | TATTTAAATAGGGTCTAAAA+TGG | + | tig0025956:48664-48683 | Msa1426230:intron | 20.0% |
| !! | TAGACTATACAAAATGAATA+TGG | + | tig0025956:48727-48746 | Msa1426230:intron | 20.0% |
| !! | AGACTATACAAAATGAATAT+GGG | + | tig0025956:48728-48747 | Msa1426230:intron | 20.0% |
| !!! | TTTCTTGGTTAAATTTTACA+AGG | - | tig0025956:48847-48866 | None:intergenic | 20.0% |
| !!! | ATAAATCAATGGATTTGAAA+TGG | + | tig0025956:49684-49703 | Msa1426230:CDS | 20.0% |
| !!! | TAAATCAATGGATTTGAAAT+GGG | + | tig0025956:49685-49704 | Msa1426230:CDS | 20.0% |
| !! | TATAATCATTCAAATATCCT+AGG | - | tig0025956:49958-49977 | None:intergenic | 20.0% |
| !! | TAGGATATTTGAATGATTAT+AGG | + | tig0025956:49957-49976 | Msa1426230:CDS | 20.0% |
| !! | AATGTTTAGTGAATATAACA+AGG | + | tig0025956:50121-50140 | Msa1426230:intron | 20.0% |
| !! | ACATGATTAATTATGTTCAA+TGG | - | tig0025956:50167-50186 | None:intergenic | 20.0% |
| !!! | CTTCATGATATTGATTTTTT+AGG | + | tig0025956:50237-50256 | Msa1426230:intron | 20.0% |
| !!! | AATGAAGTTTTTCATATTAG+AGG | + | tig0025956:50348-50367 | Msa1426230:intron | 20.0% |
| !! | CAAATATATTCTTTCATCAA+AGG | - | tig0025956:50547-50566 | None:intergenic | 20.0% |
| !! | CTTTGATGAAAGAATATATT+TGG | + | tig0025956:50545-50564 | Msa1426230:intron | 20.0% |
| !! | AGACATGATTATATGATTAT+TGG | - | tig0025956:50655-50674 | None:intergenic | 20.0% |
| !!! | GATTCTTTTTTATGATGAAT+TGG | - | tig0025956:51147-51166 | None:intergenic | 20.0% |
| !! | ATTTACAAGTGTTTAGAAAA+GGG | - | tig0025956:51373-51392 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTTCAAGTTCAG+GGG | - | tig0025956:51606-51625 | None:intergenic | 20.0% |
| !! | AGTATTTCTCAAAAAATTTC+CGG | + | tig0025956:51942-51961 | Msa1426230:intron | 20.0% |
| !! | TATAAATACACAAAAATTCC+CGG | - | tig0025956:51964-51983 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | + | tig0025956:51976-51995 | Msa1426230:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+TGG | + | tig0025956:52061-52080 | Msa1426230:intron | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | + | tig0025956:51976-51995 | Msa1426230:intron | 20.0% |
| !!! | TTTTAATTTTTCAAGTTCAG+GGG | + | tig0025956:52537-52556 | Msa1426230:intron | 20.0% |
| !!! | AATTTTCTGTTAACTGTTTA+CGG | - | tig0025956:52610-52629 | None:intergenic | 20.0% |
| !!! | TTTTAATAACAAAAGGCAAT+TGG | + | tig0025956:52788-52807 | Msa1426230:intron | 20.0% |
| !! | CAAGTTACTCATAAAATTAA+CGG | + | tig0025956:53260-53279 | Msa1426230:intron | 20.0% |
| !! | TAAATAGTCCTGAATTTATT+TGG | - | tig0025956:53292-53311 | None:intergenic | 20.0% |
| !! | ATAGTGTGAGAAAAAAAAAA+CGG | - | tig0025956:54053-54072 | None:intergenic | 20.0% |
| !!! | TCTAAAATCATGTATTGTTT+TGG | + | tig0025956:54100-54119 | Msa1426230:intron | 20.0% |
| !!! | AAATACTTTTAATGATCGAA+CGG | - | tig0025956:54247-54266 | None:intergenic | 20.0% |
| !! | TAGTTACATGATTTCTTTAA+AGG | + | tig0025956:54295-54314 | Msa1426230:intron | 20.0% |
| !! | ATTGGATATGATGATAATTA+GGG | - | tig0025956:55099-55118 | None:intergenic | 20.0% |
| !!! | CATGTTATATTAAAGTTGAT+TGG | - | tig0025956:55117-55136 | None:intergenic | 20.0% |
| !! | ATATAAAATGTCACAAAATG+TGG | + | tig0025956:55141-55160 | Msa1426230:intron | 20.0% |
| !! | TTACTTCTTTAATCTAGATT+AGG | - | tig0025956:55210-55229 | None:intergenic | 20.0% |
| !! | TTCCTTTCAGATTATAAATA+TGG | + | tig0025956:55245-55264 | Msa1426230:intron | 20.0% |
| !! | TTCCATATTTATAATCTGAA+AGG | - | tig0025956:55250-55269 | None:intergenic | 20.0% |
| !!! | AATATTTTTTTTGCTTATGC+AGG | + | tig0025956:55268-55287 | Msa1426230:intron | 20.0% |
| !!! | AACTTGATTATTTTTTTCTG+TGG | + | tig0025956:55742-55761 | Msa1426230:three_prime_UTR | 20.0% |
| ! | AAATTCTCTAAGCAATTTGA+GGG | + | tig0025956:47768-47787 | Msa1426230:CDS | 25.0% |
| !!! | AAGAAGCTTTTGTTGATTAT+TGG | + | tig0025956:47811-47830 | Msa1426230:CDS | 25.0% |
| !! | GAACTCATTTGATGATTATT+TGG | - | tig0025956:47891-47910 | None:intergenic | 25.0% |
| ! | AACTTTCTTAGTGATGAAAA+AGG | - | tig0025956:47927-47946 | None:intergenic | 25.0% |
| !! | TTGGAATTTTATAGGTTCAT+AGG | + | tig0025956:48085-48104 | Msa1426230:intron | 25.0% |
| !! | TATTAACCTTATTGAGGTTT+TGG | - | tig0025956:48212-48231 | None:intergenic | 25.0% |
| !! | TATAGAAATAGCTTGTAGAT+AGG | + | tig0025956:48575-48594 | Msa1426230:intron | 25.0% |
| !!! | AGACAATGTTCTAAAGTTAT+AGG | - | tig0025956:48618-48637 | None:intergenic | 25.0% |
| !! | GGTTAAATTTTACAAGGAAA+GGG | - | tig0025956:48841-48860 | None:intergenic | 25.0% |
| !! | TGGTTAAATTTTACAAGGAA+AGG | - | tig0025956:48842-48861 | None:intergenic | 25.0% |
| !!! | TACTTGTCTTATTCTTTTCT+TGG | - | tig0025956:48862-48881 | None:intergenic | 25.0% |
| ! | CTAATACTCTGTATATATAC+TGG | + | tig0025956:49568-49587 | Msa1426230:intron | 25.0% |
| ! | TGAATCAAATGAAAATGAAG+AGG | + | tig0025956:49661-49680 | Msa1426230:CDS | 25.0% |
| ! | AAATGAAGAGGATAAATCAA+TGG | + | tig0025956:49673-49692 | Msa1426230:CDS | 25.0% |
| !! | AAGGTAACTAATTTCTGAAA+AGG | - | tig0025956:49804-49823 | None:intergenic | 25.0% |
| ! | AGAAATTAGTTACCTTGTAA+TGG | + | tig0025956:49808-49827 | Msa1426230:CDS | 25.0% |
| ! | GTTAATACTGTTTGAATATG+TGG | + | tig0025956:50082-50101 | Msa1426230:intron | 25.0% |
| ! | AATAAATCATGTTGAGATGT+TGG | + | tig0025956:50580-50599 | Msa1426230:intron | 25.0% |
| ! | AAAAAGACAGATATTTAGAC+AGG | - | tig0025956:50723-50742 | None:intergenic | 25.0% |
| ! | CTCTTATTCATTGATCTTTA+AGG | - | tig0025956:50967-50986 | None:intergenic | 25.0% |
| ! | GACAAACAAGTAAATAAAGT+TGG | - | tig0025956:51023-51042 | None:intergenic | 25.0% |
| ! | TGTTTGTCCTAAAAATTTAC+AGG | + | tig0025956:51035-51054 | Msa1426230:intron | 25.0% |
| !! | TTTGTCAAGAATTTTGCTAA+AGG | + | tig0025956:51090-51109 | Msa1426230:CDS | 25.0% |
| !!! | TTTTATGATGAATTGGTCTA+AGG | - | tig0025956:51140-51159 | None:intergenic | 25.0% |
| ! | ACACAAAACAAACAAACTAA+AGG | - | tig0025956:51269-51288 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTTGTACATACA+AGG | - | tig0025956:51341-51360 | None:intergenic | 25.0% |
| ! | TTTACAAGTGTTTAGAAAAG+GGG | - | tig0025956:51372-51391 | None:intergenic | 25.0% |
| ! | CATTTACAAGTGTTTAGAAA+AGG | - | tig0025956:51374-51393 | None:intergenic | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | - | tig0025956:52649-52668 | None:intergenic | 25.0% |
| ! | ACAGTTAACAGAAAAATTGA+CGG | - | tig0025956:51531-51550 | None:intergenic | 25.0% |
| ! | TGCACATAAGTGTAAAATTT+CGG | - | tig0025956:52566-52585 | None:intergenic | 25.0% |
| !!! | TTAAATTTTTCAAGTTCAGG+GGG | - | tig0025956:51605-51624 | None:intergenic | 25.0% |
| ! | GTATTTCTCAAAAAATTTCC+GGG | + | tig0025956:51943-51962 | Msa1426230:intron | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | + | tig0025956:51975-51994 | Msa1426230:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | - | tig0025956:51989-52008 | None:intergenic | 25.0% |
| ! | TATAAATACACAAAAGTTCC+AGG | - | tig0025956:52082-52101 | None:intergenic | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | + | tig0025956:51975-51994 | Msa1426230:intron | 25.0% |
| !!! | TGTATTTTTTCCCTTATTCT+CGG | - | tig0025956:52107-52126 | None:intergenic | 25.0% |
| !!! | ATGTCGAAATTTTGAAATTC+TGG | - | tig0025956:52196-52215 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTCAAGTTCAGG+GGG | + | tig0025956:52538-52557 | Msa1426230:intron | 25.0% |
| ! | CACATAAGTGTAAAATTTCA+GGG | + | tig0025956:52568-52587 | Msa1426230:intron | 25.0% |
| ! | ACATAAGTGTAAAATTTCAG+GGG | + | tig0025956:52569-52588 | Msa1426230:intron | 25.0% |
| ! | ACAGTTAACAGAAAATTTGA+CGG | + | tig0025956:52613-52632 | Msa1426230:intron | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | + | tig0025956:52649-52668 | Msa1426230:intron | 25.0% |
| ! | AAGAGAAAAAAAGTAACCAT+AGG | - | tig0025956:52850-52869 | None:intergenic | 25.0% |
| ! | ATACGTTTCTAATAGTTTGA+TGG | + | tig0025956:52989-53008 | Msa1426230:intron | 25.0% |
| ! | AATTTGTCCATAAAAACTTC+TGG | + | tig0025956:53122-53141 | Msa1426230:intron | 25.0% |
| !! | TTAAGTTCCAGAAGTTTTTA+TGG | - | tig0025956:53132-53151 | None:intergenic | 25.0% |
| !!! | TAAAAACTTCTGGAACTTAA+TGG | + | tig0025956:53132-53151 | Msa1426230:intron | 25.0% |
| !!! | ATTTTATGAGTAACTTGCTA+AGG | - | tig0025956:53257-53276 | None:intergenic | 25.0% |
| ! | ATAAATTCAGGACTATTTAC+TGG | + | tig0025956:53293-53312 | Msa1426230:intron | 25.0% |
| !!! | TTTTGGTGCATATGTTTTAA+TGG | + | tig0025956:53331-53350 | Msa1426230:CDS | 25.0% |
| !!! | CATATAAGTGTTTTTAGAAC+CGG | + | tig0025956:53460-53479 | Msa1426230:intron | 25.0% |
| ! | AGTTAATTACCAGAAAAAGT+AGG | - | tig0025956:53795-53814 | None:intergenic | 25.0% |
| !! | ACTTGATTTTGTACATTTGA+TGG | + | tig0025956:53838-53857 | Msa1426230:intron | 25.0% |
| !! | ATCTTATTTATTGCATGTAC+AGG | + | tig0025956:53920-53939 | Msa1426230:intron | 25.0% |
| !!! | AGGTAGTGTTTTTTTTTTCA+TGG | + | tig0025956:54200-54219 | Msa1426230:intron | 25.0% |
| ! | TTGAGAATATGCTTAAAGAA+AGG | - | tig0025956:54503-54522 | None:intergenic | 25.0% |
| ! | CACACTAGAAATCAAATTAA+GGG | - | tig0025956:54562-54581 | None:intergenic | 25.0% |
| !! | TATGAAAAAGATAGAAGTGT+TGG | + | tig0025956:54674-54693 | Msa1426230:CDS | 25.0% |
| ! | AACTTTGTACCAATTGTATT+GGG | + | tig0025956:54733-54752 | Msa1426230:CDS | 25.0% |
| ! | ATCAATTCATTTCTTAACCA+AGG | - | tig0025956:54803-54822 | None:intergenic | 25.0% |
| ! | GATTGGATATGATGATAATT+AGG | - | tig0025956:55100-55119 | None:intergenic | 25.0% |
| ! | ATTAGGAATCTCAATTTAAG+TGG | - | tig0025956:55193-55212 | None:intergenic | 25.0% |
| !! | CAACATTTTCAAAACTTGAA+TGG | - | tig0025956:55337-55356 | None:intergenic | 25.0% |
| ! | AGACTAATAATAATGCCAAT+TGG | + | tig0025956:55627-55646 | Msa1426230:exon | 25.0% |
| ! | CATATTTAGCATTTGATGTA+GGG | + | tig0025956:55650-55669 | Msa1426230:three_prime_UTR | 25.0% |
| ! | ATATTTAGCATTTGATGTAG+GGG | + | tig0025956:55651-55670 | Msa1426230:three_prime_UTR | 25.0% |
| !!! | ATTTTTTTCTGTGGATTTGT+AGG | + | tig0025956:55751-55770 | Msa1426230:three_prime_UTR | 25.0% |
| ! | GAAAATTGTGTATACATATG+TGG | - | tig0025956:55785-55804 | None:intergenic | 25.0% |
| ! | TTGGAACAAAAAGTGAGTTT+TGG | - | tig0025956:47663-47682 | None:intergenic | 30.0% |
| !! | CACAAGATGGTGTTATATAT+TGG | - | tig0025956:47682-47701 | None:intergenic | 30.0% |
| ACAAGAACAAAGAGAGAAAA+TGG | + | tig0025956:47743-47762 | Msa1426230:exon | 30.0% | |
| GAAATTCTCTAAGCAATTTG+AGG | + | tig0025956:47767-47786 | Msa1426230:CDS | 30.0% | |
| TGATTATTGGCAACTTAAGA+AGG | + | tig0025956:47824-47843 | Msa1426230:CDS | 30.0% | |
| TAATCATCAAATGAGTTCAG+TGG | + | tig0025956:47893-47912 | Msa1426230:CDS | 30.0% | |
| ! | AGTTTACTTGAATTGGTTCA+TGG | - | tig0025956:47971-47990 | None:intergenic | 30.0% |
| CTTGTTTCATCAACTAGTAA+AGG | + | tig0025956:48111-48130 | Msa1426230:CDS | 30.0% | |
| TTTAGACCAAAACCTCAATA+AGG | + | tig0025956:48203-48222 | Msa1426230:CDS | 30.0% | |
| AGAAAGAGTTTCTTGATAGA+GGG | + | tig0025956:48250-48269 | Msa1426230:CDS | 30.0% | |
| TTCATGGATAAGAAAGGTAA+AGG | + | tig0025956:48321-48340 | Msa1426230:CDS | 30.0% | |
| TCATGGATAAGAAAGGTAAA+GGG | + | tig0025956:48322-48341 | Msa1426230:CDS | 30.0% | |
| TCATCCACATTCTCTATTAA+CGG | + | tig0025956:48381-48400 | Msa1426230:CDS | 30.0% | |
| ATTACCGTTAATAGAGAATG+TGG | - | tig0025956:48388-48407 | None:intergenic | 30.0% | |
| ACCTTCAATATGAAGTTTCA+TGG | + | tig0025956:49059-49078 | Msa1426230:intron | 30.0% | |
| ACTGACACTTCATAATGAAT+AGG | - | tig0025956:49471-49490 | None:intergenic | 30.0% | |
| ! | ATTTCTGAAAAGGTTTGAGA+AGG | - | tig0025956:49794-49813 | None:intergenic | 30.0% |
| TGAACAAATCTTCCATTACA+AGG | - | tig0025956:49823-49842 | None:intergenic | 30.0% | |
| TGCTTCGTGTTAATAAAACA+AGG | + | tig0025956:49879-49898 | Msa1426230:CDS | 30.0% | |
| ! | TGGTTTCATTGAGCTTTATA+AGG | + | tig0025956:49931-49950 | Msa1426230:CDS | 30.0% |
| ! | GGTTTCATTGAGCTTTATAA+GGG | + | tig0025956:49932-49951 | Msa1426230:CDS | 30.0% |
| GAATCTTTATAAATGCAAGC+AGG | - | tig0025956:50271-50290 | None:intergenic | 30.0% | |
| ! | GATTCTGAAGAAATTTGACA+AGG | + | tig0025956:50286-50305 | Msa1426230:CDS | 30.0% |
| !! | TCAACTACTTTGAGATAGAT+TGG | - | tig0025956:50437-50456 | None:intergenic | 30.0% |
| ATATTTCAACAACTCAGACA+AGG | + | tig0025956:50463-50482 | Msa1426230:CDS | 30.0% | |
| TATAATCATGTCTTCACCAA+AGG | + | tig0025956:50662-50681 | Msa1426230:intron | 30.0% | |
| ! | AATGATTTTAGACCATCCTT+TGG | - | tig0025956:50681-50700 | None:intergenic | 30.0% |
| TTGTCCTAAAAATTTACAGG+TGG | + | tig0025956:51038-51057 | Msa1426230:intron | 30.0% | |
| ! | TTCACCACCTGTAAATTTTT+AGG | - | tig0025956:51045-51064 | None:intergenic | 30.0% |
| CATGCAATTACTTTCTTCAT+TGG | + | tig0025956:51168-51187 | Msa1426230:CDS | 30.0% | |
| AATCCAAAGAAAACACAACA+TGG | + | tig0025956:51296-51315 | Msa1426230:intron | 30.0% | |
| TTACAAGTGTTTAGAAAAGG+GGG | - | tig0025956:51371-51390 | None:intergenic | 30.0% | |
| TTTGACAAACCTTGCAATTT+CGG | - | tig0025956:52706-52725 | None:intergenic | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | - | tig0025956:52650-52669 | None:intergenic | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | - | tig0025956:52648-52667 | None:intergenic | 30.0% | |
| TTAACAGAAAAATTGACGGA+GGG | - | tig0025956:51527-51546 | None:intergenic | 30.0% | |
| ACATAAGTGTAAAATTTCGG+GGG | - | tig0025956:51574-51593 | None:intergenic | 30.0% | |
| CACATAAGTGTAAAATTTCG+GGG | - | tig0025956:51575-51594 | None:intergenic | 30.0% | |
| GCACATAAGTGTAAAATTTC+GGG | - | tig0025956:52567-52586 | None:intergenic | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | + | tig0025956:52009-52028 | Msa1426230:intron | 30.0% | |
| ATGCATAAAAAACCTAAGCT+CGG | - | tig0025956:52024-52043 | None:intergenic | 30.0% | |
| TTAGTATATATGTCGAGCTT+AGG | - | tig0025956:52139-52158 | None:intergenic | 30.0% | |
| GCACATAAGTGTAAAATTTC+AGG | + | tig0025956:52567-52586 | Msa1426230:intron | 30.0% | |
| CATAAGTGTAAAATTTCAGG+GGG | + | tig0025956:52570-52589 | Msa1426230:intron | 30.0% | |
| ATAAGTGTAAAATTTCAGGG+GGG | + | tig0025956:52571-52590 | Msa1426230:intron | 30.0% | |
| TTAACAGAAAATTTGACGGA+GGG | + | tig0025956:52617-52636 | Msa1426230:intron | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | + | tig0025956:52648-52667 | Msa1426230:intron | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | + | tig0025956:52650-52669 | Msa1426230:intron | 30.0% | |
| ATTGATGTTTCGTTAACTAC+AGG | + | tig0025956:52677-52696 | Msa1426230:intron | 30.0% | |
| TTGATGTTTCGTTAACTACA+GGG | + | tig0025956:52678-52697 | Msa1426230:intron | 30.0% | |
| TTTGACAAACCTTGCAATTT+CGG | + | tig0025956:52706-52725 | Msa1426230:intron | 30.0% | |
| TTGACCATTAATATCTCCTA+TGG | + | tig0025956:52831-52850 | Msa1426230:intron | 30.0% | |
| GTAACCATAGGAGATATTAA+TGG | - | tig0025956:52838-52857 | None:intergenic | 30.0% | |
| TATGTGACTTAGAAGTTGTT+AGG | + | tig0025956:52957-52976 | Msa1426230:intron | 30.0% | |
| ATGTGACTTAGAAGTTGTTA+GGG | + | tig0025956:52958-52977 | Msa1426230:intron | 30.0% | |
| GGAATCTTCCAAATAAATTC+AGG | + | tig0025956:53281-53300 | Msa1426230:intron | 30.0% | |
| ! | ACTATTTACTGGATGCTTTT+GGG | + | tig0025956:53304-53323 | Msa1426230:CDS | 30.0% |
| ! | TTTCCATGTAGACTGAATTT+TGG | - | tig0025956:53385-53404 | None:intergenic | 30.0% |
| TTTCTACATTTCTTCCTCTA+TGG | + | tig0025956:53571-53590 | Msa1426230:CDS | 30.0% | |
| ATTTGACTCTACTCACAAAA+GGG | + | tig0025956:53737-53756 | Msa1426230:CDS | 30.0% | |
| GCATACAAGTAATAGTAAGA+AGG | - | tig0025956:53946-53965 | None:intergenic | 30.0% | |
| TTATGTTCCTTATCACACAA+AGG | - | tig0025956:54007-54026 | None:intergenic | 30.0% | |
| GTGTGATAAGGAACATAATT+TGG | + | tig0025956:54009-54028 | Msa1426230:CDS | 30.0% | |
| AATTTGGTCACCTCTTTATA+AGG | + | tig0025956:54025-54044 | Msa1426230:CDS | 30.0% | |
| AAAAACGGTACCTTATAAAG+AGG | - | tig0025956:54038-54057 | None:intergenic | 30.0% | |
| !!! | TCTTATGCTGGACTTTTTTA+TGG | + | tig0025956:54159-54178 | Msa1426230:CDS | 30.0% |
| ATGGCATGTTACTATATAAC+TGG | + | tig0025956:54344-54363 | Msa1426230:CDS | 30.0% | |
| TGGCATGTTACTATATAACT+GGG | + | tig0025956:54345-54364 | Msa1426230:CDS | 30.0% | |
| GCACACTAGAAATCAAATTA+AGG | - | tig0025956:54563-54582 | None:intergenic | 30.0% | |
| !! | AATTTGATTTCTAGTGTGCA+AGG | + | tig0025956:54564-54583 | Msa1426230:intron | 30.0% |
| !! | AAAAAGATAGAAGTGTTGGA+TGG | + | tig0025956:54678-54697 | Msa1426230:CDS | 30.0% |
| CAACTTTGTACCAATTGTAT+TGG | + | tig0025956:54732-54751 | Msa1426230:CDS | 30.0% | |
| TTACAAAGTCCCAATACAAT+TGG | - | tig0025956:54745-54764 | None:intergenic | 30.0% | |
| AATTGTATTGGGACTTTGTA+AGG | + | tig0025956:54744-54763 | Msa1426230:CDS | 30.0% | |
| ATTGTATTGGGACTTTGTAA+GGG | + | tig0025956:54745-54764 | Msa1426230:CDS | 30.0% | |
| ATTTCTTAACCAAGGATTCT+TGG | - | tig0025956:54795-54814 | None:intergenic | 30.0% | |
| AGCTATTTACTACTTGTCAA+TGG | + | tig0025956:54835-54854 | Msa1426230:CDS | 30.0% | |
| ! | AATCTTTAGAGAGAGCAAAA+GGG | - | tig0025956:54874-54893 | None:intergenic | 30.0% |
| ! | TAATCTTTAGAGAGAGCAAA+AGG | - | tig0025956:54875-54894 | None:intergenic | 30.0% |
| AGGTATTAAACATTACTCTG+AGG | + | tig0025956:55288-55307 | Msa1426230:intron | 30.0% | |
| AAGTTATTAGAAGAGGACTA+TGG | + | tig0025956:55393-55412 | Msa1426230:CDS | 30.0% | |
| CAAATGCTAAATATGCCAAT+TGG | - | tig0025956:55645-55664 | None:intergenic | 30.0% | |
| GCATATTTAGCATTTGATGT+AGG | + | tig0025956:55649-55668 | Msa1426230:three_prime_UTR | 30.0% | |
| TGTTTACATCAACTTGAATG+AGG | - | tig0025956:55716-55735 | None:intergenic | 30.0% | |
| GTGTTGAATGAAACACAAGA+TGG | - | tig0025956:47695-47714 | None:intergenic | 35.0% | |
| ACAAAAGCTTCTTTCCATTC+TGG | - | tig0025956:47804-47823 | None:intergenic | 35.0% | |
| GAGAAAGAGTTTCTTGATAG+AGG | + | tig0025956:48249-48268 | Msa1426230:CDS | 35.0% | |
| GAAAGAGTTTCTTGATAGAG+GGG | + | tig0025956:48251-48270 | Msa1426230:CDS | 35.0% | |
| GGAGTCCTTGAAAAAACAAA+TGG | + | tig0025956:48272-48291 | Msa1426230:CDS | 35.0% | |
| TCTGCATTCATGGATAAGAA+AGG | + | tig0025956:48315-48334 | Msa1426230:CDS | 35.0% | |
| GCTTGTAGATAGGTACATAT+AGG | + | tig0025956:48585-48604 | Msa1426230:intron | 35.0% | |
| ! | AAATAGGGTCTAAAATGGTG+TGG | + | tig0025956:48669-48688 | Msa1426230:intron | 35.0% |
| GCCATGAAACTTCATATTGA+AGG | - | tig0025956:49063-49082 | None:intergenic | 35.0% | |
| TTGAACGTAACAACATGTGT+TGG | + | tig0025956:49133-49152 | Msa1426230:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | + | tig0025956:49195-49214 | Msa1426230:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | - | tig0025956:49063-49082 | None:intergenic | 35.0% | |
| TGTTAGACACTGAAACATGT+TGG | + | tig0025956:49297-49316 | Msa1426230:intron | 35.0% | |
| GCCTTCAATATGAAGTTTCA+TGG | + | tig0025956:49195-49214 | Msa1426230:intron | 35.0% | |
| GCCATGAAACTTCATATTGA+AGG | - | tig0025956:49063-49082 | None:intergenic | 35.0% | |
| TGTATATATACTGGATGCAG+AGG | + | tig0025956:49577-49596 | Msa1426230:intron | 35.0% | |
| ! | ATGGATTTGAAATGGGAAGA+TGG | + | tig0025956:49692-49711 | Msa1426230:CDS | 35.0% |
| AATGGGAAGATGGTAAATTG+AGG | + | tig0025956:49702-49721 | Msa1426230:CDS | 35.0% | |
| GGTAAATTGAGGACATTATC+CGG | + | tig0025956:49713-49732 | Msa1426230:CDS | 35.0% | |
| TCAAGAAAATGCAATCCAGA+AGG | + | tig0025956:49851-49870 | Msa1426230:CDS | 35.0% | |
| CATGCAGAAAAGATGATCAA+AGG | + | tig0025956:49908-49927 | Msa1426230:CDS | 35.0% | |
| CTTATGATTTCTTCTCCTTC+AGG | + | tig0025956:50391-50410 | Msa1426230:intron | 35.0% | |
| AACTCAGACAAGGTAAACAA+TGG | + | tig0025956:50473-50492 | Msa1426230:intron | 35.0% | |
| GTGTTACCAACAATATCAAG+TGG | + | tig0025956:50629-50648 | Msa1426230:intron | 35.0% | |
| TATTGGCCACTTGATATTGT+TGG | - | tig0025956:50638-50657 | None:intergenic | 35.0% | |
| TGATGCTTAAGATTGACTGA+TGG | + | tig0025956:50889-50908 | Msa1426230:intron | 35.0% | |
| TGCTAAAGGAGATCATAGAA+AGG | + | tig0025956:51104-51123 | Msa1426230:CDS | 35.0% | |
| ACTCGTTATGCAAATATGCA+TGG | - | tig0025956:51400-51419 | None:intergenic | 35.0% | |
| TTGACAAACCTTGCAATTTC+GGG | - | tig0025956:52707-52726 | None:intergenic | 35.0% | |
| GATGTTTCGTTAACTACAGA+TGG | - | tig0025956:51464-51483 | None:intergenic | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | - | tig0025956:52651-52670 | None:intergenic | 35.0% | |
| TAACAGAAAAATTGACGGAG+GGG | - | tig0025956:51526-51545 | None:intergenic | 35.0% | |
| GTTAACAGAAAAATTGACGG+AGG | - | tig0025956:51528-51547 | None:intergenic | 35.0% | |
| CATAAGTGTAAAATTTCGGG+GGG | - | tig0025956:51573-51592 | None:intergenic | 35.0% | |
| GTTAACAGAAAATTTGACGG+AGG | + | tig0025956:52616-52635 | Msa1426230:intron | 35.0% | |
| TAACAGAAAATTTGACGGAG+GGG | + | tig0025956:52618-52637 | Msa1426230:intron | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | + | tig0025956:52651-52670 | Msa1426230:intron | 35.0% | |
| TGATGTTTCGTTAACTACAG+GGG | + | tig0025956:52679-52698 | Msa1426230:intron | 35.0% | |
| TTGACAAACCTTGCAATTTC+GGG | + | tig0025956:52707-52726 | Msa1426230:intron | 35.0% | |
| TACTCACACAGTTATGATGT+GGG | - | tig0025956:52939-52958 | None:intergenic | 35.0% | |
| ATACTCACACAGTTATGATG+TGG | - | tig0025956:52940-52959 | None:intergenic | 35.0% | |
| CATGAGTTCTTATCAGAAGT+CGG | - | tig0025956:53188-53207 | None:intergenic | 35.0% | |
| ! | GACTATTTACTGGATGCTTT+TGG | + | tig0025956:53303-53322 | Msa1426230:CDS | 35.0% |
| !! | GTTTTAATGGCTCATCTTAC+TGG | + | tig0025956:53344-53363 | Msa1426230:CDS | 35.0% |
| ACACCAAAATTCAGTCTACA+TGG | + | tig0025956:53379-53398 | Msa1426230:CDS | 35.0% | |
| ! | CTTTTACTTACCTAAGCACA+GGG | - | tig0025956:53415-53434 | None:intergenic | 35.0% |
| ! | TCTTTTACTTACCTAAGCAC+AGG | - | tig0025956:53416-53435 | None:intergenic | 35.0% |
| TTTCGAGATAGTTCCAACTA+AGG | + | tig0025956:53642-53661 | Msa1426230:CDS | 35.0% | |
| ! | CTGTACTTTAGTTCCTTAGT+TGG | - | tig0025956:53658-53677 | None:intergenic | 35.0% |
| CATTTGACTCTACTCACAAA+AGG | + | tig0025956:53736-53755 | Msa1426230:CDS | 35.0% | |
| AAGGAATTGAACTTGTGCAT+AGG | - | tig0025956:53767-53786 | None:intergenic | 35.0% | |
| ACCGGTATATAATGTTGAAC+GGG | - | tig0025956:53968-53987 | None:intergenic | 35.0% | |
| GACCGGTATATAATGTTGAA+CGG | - | tig0025956:53969-53988 | None:intergenic | 35.0% | |
| !! | TGCATTTTCTATTTCTCCCT+AGG | + | tig0025956:54135-54154 | Msa1426230:intron | 35.0% |
| ! | CTTTAAAGGTTCCAATGCTA+AGG | + | tig0025956:54309-54328 | Msa1426230:intron | 35.0% |
| AGTAACATGCCATAAACTCT+AGG | - | tig0025956:54337-54356 | None:intergenic | 35.0% | |
| AGCTATAAGACTCAAGACTA+TGG | + | tig0025956:54368-54387 | Msa1426230:CDS | 35.0% | |
| TGTCCTTTCTGCCATATTAT+TGG | + | tig0025956:54435-54454 | Msa1426230:CDS | 35.0% | |
| TCTCCAATAATATGGCAGAA+AGG | - | tig0025956:54441-54460 | None:intergenic | 35.0% | |
| TGCATTGCTCTCCAATAATA+TGG | - | tig0025956:54449-54468 | None:intergenic | 35.0% | |
| ATATTATTGGAGAGCAATGC+AGG | + | tig0025956:54448-54467 | Msa1426230:CDS | 35.0% | |
| ACAAGTCACCTTATCAATCT+GGG | + | tig0025956:54608-54627 | Msa1426230:CDS | 35.0% | |
| CATATTTGCCCAGATTGATA+AGG | - | tig0025956:54619-54638 | None:intergenic | 35.0% | |
| CAAACATGACACATACATGT+AGG | - | tig0025956:55035-55054 | None:intergenic | 35.0% | |
| ACGAGACATTGAAATAGACA+TGG | - | tig0025956:55062-55081 | None:intergenic | 35.0% | |
| GCACTTGAAGTTATTAGAAG+AGG | + | tig0025956:55386-55405 | Msa1426230:CDS | 35.0% | |
| CATGAGCATCTAAATAATGC+TGG | + | tig0025956:55547-55566 | Msa1426230:CDS | 35.0% | |
| ATCTGCTCCTTCAAGTATTT+GGG | - | tig0025956:55686-55705 | None:intergenic | 35.0% | |
| AATCTGCTCCTTCAAGTATT+TGG | - | tig0025956:55687-55706 | None:intergenic | 35.0% | |
| GAATTTGGAAGATATGGTGG+TGG | - | tig0025956:47566-47585 | None:intergenic | 40.0% | |
| AGGGAATTTGGAAGATATGG+TGG | - | tig0025956:47569-47588 | None:intergenic | 40.0% | |
| CTGAGGGAATTTGGAAGATA+TGG | - | tig0025956:47572-47591 | None:intergenic | 40.0% | |
| TATCTTCCAAATTCCCTCAG+TGG | + | tig0025956:47572-47591 | Msa1426230:five_prime_UTR | 40.0% | |
| ACTATATGCTTCTCCACTGA+GGG | - | tig0025956:47588-47607 | None:intergenic | 40.0% | |
| TACTATATGCTTCTCCACTG+AGG | - | tig0025956:47589-47608 | None:intergenic | 40.0% | |
| !!! | GTGAGTTTTGGTTGATATGC+TGG | - | tig0025956:47651-47670 | None:intergenic | 40.0% |
| TAGCATCAGTGTCAGCAAAT+TGG | - | tig0025956:48164-48183 | None:intergenic | 40.0% | |
| TGAGCTCAAATCTGCATTCA+TGG | + | tig0025956:48305-48324 | Msa1426230:CDS | 40.0% | |
| GAACTCTTCTCACTATTCCA+AGG | + | tig0025956:48344-48363 | Msa1426230:CDS | 40.0% | |
| GTCATTGTCAATCTTGTGGT+TGG | - | tig0025956:48928-48947 | None:intergenic | 40.0% | |
| ! | ACGTGTCATTGTCAATCTTG+TGG | - | tig0025956:48932-48951 | None:intergenic | 40.0% |
| GTGTTAGTGTTGTGTTGTGT+CGG | + | tig0025956:49008-49027 | Msa1426230:intron | 40.0% | |
| TGTTAGACACTGACACATGT+TGG | + | tig0025956:49161-49180 | Msa1426230:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+CGG | - | tig0025956:49190-49209 | None:intergenic | 40.0% |
| TTGAACGTGACAACATGTGT+TGG | + | tig0025956:49269-49288 | Msa1426230:intron | 40.0% | |
| ! | CTTCATATTGAAGGCGTGTT+CGG | - | tig0025956:49190-49209 | None:intergenic | 40.0% |
| TGTCAGACACTAACACATGT+TGG | + | tig0025956:49433-49452 | Msa1426230:intron | 40.0% | |
| CAGAGAACAAACAGAGGATT+TGG | + | tig0025956:49616-49635 | Msa1426230:CDS | 40.0% | |
| !! | TTATCCGGCCATTTTCTTAG+TGG | + | tig0025956:49728-49747 | Msa1426230:CDS | 40.0% |
| !! | TATCCGGCCATTTTCTTAGT+GGG | + | tig0025956:49729-49748 | Msa1426230:CDS | 40.0% |
| TTCCTTGCCCACTAAGAAAA+TGG | - | tig0025956:49739-49758 | None:intergenic | 40.0% | |
| !! | GTTTGAGAAGGTGTTGTCAA+AGG | - | tig0025956:49782-49801 | None:intergenic | 40.0% |
| AGAAAATGCAATCCAGAAGG+TGG | + | tig0025956:49854-49873 | Msa1426230:CDS | 40.0% | |
| GCAGAAAAGATGATCAAAGG+TGG | + | tig0025956:49911-49930 | Msa1426230:CDS | 40.0% | |
| ! | ATTGAGCTTTATAAGGGCCT+AGG | + | tig0025956:49938-49957 | Msa1426230:CDS | 40.0% |
| !! | TTTGCTTTTCTGTGACCTGA+AGG | - | tig0025956:50409-50428 | None:intergenic | 40.0% |
| GAGTTGCAAAGGATAACTAG+TGG | - | tig0025956:50606-50625 | None:intergenic | 40.0% | |
| !! | GGTAACACTTTGAGTTGCAA+AGG | - | tig0025956:50617-50636 | None:intergenic | 40.0% |
| ATCATGTCTTCACCAAAGGA+TGG | + | tig0025956:50666-50685 | Msa1426230:intron | 40.0% | |
| TTTACAGGTGGTGAAGTTCA+TGG | + | tig0025956:51050-51069 | Msa1426230:intron | 40.0% | |
| ! | GGTCCATGTTGTGTTTTCTT+TGG | - | tig0025956:51302-51321 | None:intergenic | 40.0% |
| TACAAGGAGCTAGTGACTAA+GGG | - | tig0025956:51325-51344 | None:intergenic | 40.0% | |
| ATACAAGGAGCTAGTGACTA+AGG | - | tig0025956:51326-51345 | None:intergenic | 40.0% | |
| ! | CAATTTTCCCCGAAATTGCA+AGG | + | tig0025956:51427-51446 | Msa1426230:intron | 40.0% |
| TGACAAACCTTGCAATTTCG+GGG | - | tig0025956:52708-52727 | None:intergenic | 40.0% | |
| AACGTTATGCAATTTCAGGG+GGG | - | tig0025956:52652-52671 | None:intergenic | 40.0% | |
| AACAGAAAAATTGACGGAGG+GGG | - | tig0025956:51525-51544 | None:intergenic | 40.0% | |
| AACAGAAAATTTGACGGAGG+GGG | + | tig0025956:52619-52638 | Msa1426230:intron | 40.0% | |
| AACGTTATGCAATTTCAGGG+GGG | + | tig0025956:52652-52671 | Msa1426230:intron | 40.0% | |
| TGACAAACCTTGCAATTTCG+GGG | + | tig0025956:52708-52727 | Msa1426230:intron | 40.0% | |
| AAAAGGCAATTGGCACATCA+TGG | + | tig0025956:52798-52817 | Msa1426230:intron | 40.0% | |
| ACTCACACAGTTATGATGTG+GGG | - | tig0025956:52938-52957 | None:intergenic | 40.0% | |
| CAATAATGTTGCAGCCATAG+AGG | - | tig0025956:53588-53607 | None:intergenic | 40.0% | |
| ATGGCTGCAACATTATTGCA+TGG | + | tig0025956:53590-53609 | Msa1426230:CDS | 40.0% | |
| TACAATGTCTATGACTGCTG+TGG | + | tig0025956:53696-53715 | Msa1426230:CDS | 40.0% | |
| GCACAAGTTCAATTCCTTCT+TGG | + | tig0025956:53769-53788 | Msa1426230:CDS | 40.0% | |
| GCCCGTTCAACATTATATAC+CGG | + | tig0025956:53964-53983 | Msa1426230:CDS | 40.0% | |
| TCACACAAAGGAAGTGGTAT+CGG | - | tig0025956:53995-54014 | None:intergenic | 40.0% | |
| ACCACTTCCTTTGTGTGATA+AGG | + | tig0025956:53997-54016 | Msa1426230:CDS | 40.0% | |
| TCCTTATCACACAAAGGAAG+TGG | - | tig0025956:54001-54020 | None:intergenic | 40.0% | |
| AAGTCCAGCATAAGAACCTA+GGG | - | tig0025956:54154-54173 | None:intergenic | 40.0% | |
| AAAGTCCAGCATAAGAACCT+AGG | - | tig0025956:54155-54174 | None:intergenic | 40.0% | |
| AAGACTATGGATACTGCATG+AGG | + | tig0025956:54381-54400 | Msa1426230:CDS | 40.0% | |
| AGACTATGGATACTGCATGA+GGG | + | tig0025956:54382-54401 | Msa1426230:CDS | 40.0% | |
| !! | ATTTCTAGTGTGCAAGGAGA+TGG | + | tig0025956:54570-54589 | Msa1426230:intron | 40.0% |
| CAAGGAGATGGTTTGATGAA+GGG | + | tig0025956:54582-54601 | Msa1426230:CDS | 40.0% | |
| AAGGAGATGGTTTGATGAAG+GGG | + | tig0025956:54583-54602 | Msa1426230:CDS | 40.0% | |
| CACAAGTCACCTTATCAATC+TGG | + | tig0025956:54607-54626 | Msa1426230:CDS | 40.0% | |
| ATTGGGACTTTGTAAGGGAT+TGG | + | tig0025956:54750-54769 | Msa1426230:CDS | 40.0% | |
| TTGGGACTTTGTAAGGGATT+GGG | + | tig0025956:54751-54770 | Msa1426230:CDS | 40.0% | |
| AAAGGAACTCCAAGAATCCT+TGG | + | tig0025956:54783-54802 | Msa1426230:CDS | 40.0% | |
| ! | GGTGTTATACGTGTTGGTAT+TGG | + | tig0025956:54942-54961 | Msa1426230:intron | 40.0% |
| GAGGACTATGGAATTTCTAC+AGG | + | tig0025956:55405-55424 | Msa1426230:CDS | 40.0% | |
| TCCACTTCATGAAAAGGAAG+TGG | - | tig0025956:55598-55617 | None:intergenic | 40.0% | |
| ! | ACTTCCTTTTCATGAAGTGG+AGG | + | tig0025956:55597-55616 | Msa1426230:CDS | 40.0% |
| TCATCCTCCACTTCATGAAA+AGG | - | tig0025956:55604-55623 | None:intergenic | 40.0% | |
| GATTCCACCCAAATACTTGA+AGG | + | tig0025956:55676-55695 | Msa1426230:three_prime_UTR | 40.0% | |
| AGGGACAACTCATTCCAGAA+TGG | + | tig0025956:47787-47806 | Msa1426230:CDS | 45.0% | |
| CTCTTCTCACTATTCCAAGG+AGG | + | tig0025956:48347-48366 | Msa1426230:CDS | 45.0% | |
| TTCTCACTATTCCAAGGAGG+AGG | + | tig0025956:48350-48369 | Msa1426230:CDS | 45.0% | |
| ! | GGGTCTAAAATGGTGTGGTT+TGG | + | tig0025956:48674-48693 | Msa1426230:intron | 45.0% |
| ! | TGGTGTGGTTTGGAGAGAAA+TGG | + | tig0025956:48684-48703 | Msa1426230:intron | 45.0% |
| ATGCAGAGGAAGACTCTGTT+AGG | + | tig0025956:49591-49610 | Msa1426230:intron | 45.0% | |
| TAGGAGCAGAGAACAAACAG+AGG | + | tig0025956:49610-49629 | Msa1426230:CDS | 45.0% | |
| TTGCCCACTAAGAAAATGGC+CGG | - | tig0025956:49735-49754 | None:intergenic | 45.0% | |
| ACAAGGAGCTAGTGACTAAG+GGG | - | tig0025956:51324-51343 | None:intergenic | 45.0% | |
| GACAAACCTTGCAATTTCGG+GGG | + | tig0025956:52709-52728 | Msa1426230:intron | 45.0% | |
| ACAAACCTTGCAATTTCGGG+GGG | + | tig0025956:52710-52729 | Msa1426230:intron | 45.0% | |
| ! | ATTTTCCCCCCGAAATTGCA+AGG | - | tig0025956:52718-52737 | None:intergenic | 45.0% |
| ! | GGATGCTTTTGGGCACTTTT+TGG | + | tig0025956:53314-53333 | Msa1426230:CDS | 45.0% |
| AAACTGTCTACCCTGTGCTT+AGG | + | tig0025956:53402-53421 | Msa1426230:CDS | 45.0% | |
| ATGTCTATGACTGCTGTGGT+TGG | + | tig0025956:53700-53719 | Msa1426230:CDS | 45.0% | |
| CCAGAAAAAGTAGGCCAAGA+AGG | - | tig0025956:53786-53805 | None:intergenic | 45.0% | |
| !!! | CCTTCTTGGCCTACTTTTTC+TGG | + | tig0025956:53783-53802 | Msa1426230:CDS | 45.0% |
| TTCTCCCTAGGTTCTTATGC+TGG | + | tig0025956:54147-54166 | Msa1426230:intron | 45.0% | |
| AACTCTAGGCTCCTTAGCAT+TGG | - | tig0025956:54323-54342 | None:intergenic | 45.0% | |
| GCTAAGGAGCCTAGAGTTTA+TGG | + | tig0025956:54325-54344 | Msa1426230:CDS | 45.0% | |
| GCAAGGAGATGGTTTGATGA+AGG | + | tig0025956:54581-54600 | Msa1426230:CDS | 45.0% | |
| GTTTCAGCTATGTTAGCTGC+AGG | + | tig0025956:54638-54657 | Msa1426230:CDS | 45.0% | |
| TGGGACTTTGTAAGGGATTG+GGG | + | tig0025956:54752-54771 | Msa1426230:CDS | 45.0% | |
| !! | GGGATTGGGGTTTGTTACAA+AGG | + | tig0025956:54765-54784 | Msa1426230:CDS | 45.0% |
| CTTCTGATTGAAGACGTGTC+TGG | + | tig0025956:54921-54940 | Msa1426230:intron | 45.0% | |
| !! | GTGTCTGGTGTTATACGTGT+TGG | + | tig0025956:54936-54955 | Msa1426230:intron | 45.0% |
| !! | ACATTACTCTGAGGCTTGCT+TGG | + | tig0025956:55297-55316 | Msa1426230:CDS | 45.0% |
| ! | TGGCAAGTTTAGAGCAGTGA+AGG | + | tig0025956:55567-55586 | Msa1426230:CDS | 45.0% |
| ! | GCCACTTCCTTTTCATGAAG+TGG | + | tig0025956:55594-55613 | Msa1426230:CDS | 45.0% |
| TGCTCCTTCAAGTATTTGGG+TGG | - | tig0025956:55683-55702 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTAATATAAATTG+TGG | - | tig0025956:50330-50349 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTAAAAAATTC+TGG | + | tig0025956:51654-51673 | Msa1426230:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | tig0025956:51695-51714 | Msa1426230:intron | 5.0% |
| !! | TGGTGGTGGCTAGTTTATGC+AGG | - | tig0025956:47552-47571 | None:intergenic | 50.0% |
| GCTTCTCCACTGAGGGAATT+TGG | - | tig0025956:47581-47600 | None:intergenic | 50.0% | |
| TGAGACAGATTCCTCCTCCT+TGG | - | tig0025956:48364-48383 | None:intergenic | 50.0% | |
| TGTCGGACACTGACACATGT+TGG | + | tig0025956:49025-49044 | Msa1426230:intron | 50.0% | |
| !! | GGCCATTTTCTTAGTGGGCA+AGG | + | tig0025956:49734-49753 | Msa1426230:CDS | 50.0% |
| GTGGGCAAGGAAAGAATGTG+AGG | + | tig0025956:49747-49766 | Msa1426230:CDS | 50.0% | |
| GGTGAAGTTCATGGACGAAG+TGG | + | tig0025956:51059-51078 | Msa1426230:CDS | 50.0% | |
| GAAGTTCATGGACGAAGTGG+AGG | + | tig0025956:51062-51081 | Msa1426230:CDS | 50.0% | |
| CAAGGAGCTAGTGACTAAGG+GGG | - | tig0025956:51323-51342 | None:intergenic | 50.0% | |
| !!! | GTTTTTAGAACCGGACCAGC+TGG | + | tig0025956:53469-53488 | Msa1426230:intron | 50.0% |
| GTGCAAGTACAATCCGATCG+TGG | - | tig0025956:53500-53519 | None:intergenic | 50.0% | |
| GGCTGATCAACTTTGCAGTC+AGG | + | tig0025956:54180-54199 | Msa1426230:CDS | 50.0% | |
| ! | GATCATATCCGGTGGCGGTT+TGG | + | tig0025956:47519-47538 | Msa1426230:five_prime_UTR | 55.0% |
| GAAAGTGACCAAACCGCCAC+CGG | - | tig0025956:47530-47549 | None:intergenic | 55.0% | |
| ACACGAAGCACACCACCTTC+TGG | - | tig0025956:49869-49888 | None:intergenic | 55.0% | |
| ! | CCAGCTGGTTCAACCACGAT+CGG | + | tig0025956:53484-53503 | Msa1426230:intron | 55.0% |
| !! | GGAAGTGGTATCGGCTTGAC+CGG | - | tig0025956:53986-54005 | None:intergenic | 55.0% |
| CGTGGTTGAACCAGCTGGTC+CGG | - | tig0025956:53482-53501 | None:intergenic | 60.0% | |
| CCGATCGTGGTTGAACCAGC+TGG | - | tig0025956:53487-53506 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025956 | gene | 47517 | 55826 | 47517 | ID=Msa1426230;Name=Msa1426230 |
| tig0025956 | mRNA | 47517 | 55826 | 47517 | ID=Msa1426230-mRNA-1;Parent=Msa1426230;Name=Msa1426230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=245|1|1|1|1|1|14|193|781 |
| tig0025956 | exon | 47517 | 47983 | 47517 | ID=Msa1426230-mRNA-1:exon:4729;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 48099 | 48402 | 48099 | ID=Msa1426230-mRNA-1:exon:4730;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 49597 | 49978 | 49597 | ID=Msa1426230-mRNA-1:exon:4731;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 50259 | 50307 | 50259 | ID=Msa1426230-mRNA-1:exon:4732;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 50413 | 50484 | 50413 | ID=Msa1426230-mRNA-1:exon:4733;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 51057 | 51189 | 51057 | ID=Msa1426230-mRNA-1:exon:4734;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 53303 | 53423 | 53303 | ID=Msa1426230-mRNA-1:exon:4735;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 53555 | 53804 | 53555 | ID=Msa1426230-mRNA-1:exon:4736;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 53942 | 54046 | 53942 | ID=Msa1426230-mRNA-1:exon:4737;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 54157 | 54201 | 54157 | ID=Msa1426230-mRNA-1:exon:4738;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 54317 | 54469 | 54317 | ID=Msa1426230-mRNA-1:exon:4739;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 54578 | 54856 | 54578 | ID=Msa1426230-mRNA-1:exon:4740;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 55290 | 55426 | 55290 | ID=Msa1426230-mRNA-1:exon:4741;Parent=Msa1426230-mRNA-1 |
| tig0025956 | exon | 55540 | 55826 | 55540 | ID=Msa1426230-mRNA-1:exon:4742;Parent=Msa1426230-mRNA-1 |
| tig0025956 | five_prime_UTR | 47517 | 47761 | 47517 | ID=Msa1426230-mRNA-1:five_prime_utr;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 47762 | 47983 | 47762 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 48099 | 48402 | 48099 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 49597 | 49978 | 49597 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 50259 | 50307 | 50259 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 50413 | 50484 | 50413 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 51057 | 51189 | 51057 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 53303 | 53423 | 53303 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 53555 | 53804 | 53555 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 53942 | 54046 | 53942 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 54157 | 54201 | 54157 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 54317 | 54469 | 54317 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 54578 | 54856 | 54578 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 55290 | 55426 | 55290 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | CDS | 55540 | 55633 | 55540 | ID=Msa1426230-mRNA-1:cds;Parent=Msa1426230-mRNA-1 |
| tig0025956 | three_prime_UTR | 55634 | 55826 | 55634 | ID=Msa1426230-mRNA-1:three_prime_utr;Parent=Msa1426230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
