Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252980 | XP_013446269.1 | 98.017 | 605 | 11 | 1 | 1 | 605 | 1 | 604 | 0.0 | 1235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252980 | sp|Q501H5|SFH13_ARATH | 56.918 | 636 | 232 | 15 | 1 | 605 | 1 | 625 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252980 | A0A072TSY8 | 98.017 | 605 | 11 | 1 | 1 | 605 | 1 | 604 | 0.0 | 1235 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1252980 | Msa1279150 | 0.805602 | 1.233391e-49 | -8.615850e-47 |
| Msa1003740 | Msa1252980 | 0.804044 | 2.609676e-49 | -8.615850e-47 |
| Msa1003800 | Msa1252980 | 0.800201 | 1.610291e-48 | -8.615850e-47 |
| Msa1003930 | Msa1252980 | 0.804114 | 2.522970e-49 | -8.615850e-47 |
| Msa1080000 | Msa1252980 | 0.804585 | 2.012877e-49 | -8.615850e-47 |
| Msa1199820 | Msa1252980 | 0.901710 | 2.034051e-78 | -8.615850e-47 |
| Msa0483910 | Msa1252980 | 0.803081 | 4.132307e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252980 | MtrunA17_Chr8g0369291 | 97.686 | 605 | 11 | 2 | 1 | 605 | 1 | 602 | 0.0 | 1226 |
| Msa1252980 | MtrunA17_Chr3g0080051 | 65.397 | 604 | 191 | 9 | 14 | 605 | 21 | 618 | 0.0 | 751 |
| Msa1252980 | MtrunA17_Chr1g0155521 | 44.663 | 609 | 301 | 14 | 14 | 605 | 31 | 620 | 1.11e-159 | 471 |
| Msa1252980 | MtrunA17_Chr4g0035391 | 40.932 | 601 | 303 | 12 | 29 | 605 | 43 | 615 | 2.83e-143 | 429 |
| Msa1252980 | MtrunA17_Chr7g0236461 | 43.212 | 604 | 285 | 14 | 11 | 597 | 17 | 579 | 9.08e-143 | 427 |
| Msa1252980 | MtrunA17_Chr3g0144911 | 54.615 | 390 | 167 | 5 | 14 | 396 | 30 | 416 | 1.06e-142 | 421 |
| Msa1252980 | MtrunA17_Chr3g0141821 | 43.339 | 593 | 293 | 11 | 14 | 599 | 13 | 569 | 3.15e-136 | 409 |
| Msa1252980 | MtrunA17_Chr5g0404711 | 49.072 | 377 | 178 | 7 | 29 | 399 | 12 | 380 | 2.22e-120 | 365 |
| Msa1252980 | MtrunA17_Chr3g0144891 | 37.824 | 579 | 310 | 11 | 12 | 586 | 18 | 550 | 2.86e-114 | 352 |
| Msa1252980 | MtrunA17_Chr8g0372651 | 58.451 | 284 | 114 | 2 | 59 | 339 | 45 | 327 | 2.22e-109 | 339 |
| Msa1252980 | MtrunA17_Chr4g0035361 | 40.358 | 503 | 243 | 13 | 91 | 586 | 2 | 454 | 4.31e-106 | 328 |
| Msa1252980 | MtrunA17_Chr5g0399151 | 46.405 | 306 | 158 | 4 | 30 | 332 | 54 | 356 | 7.33e-89 | 282 |
| Msa1252980 | MtrunA17_Chr4g0035381 | 51.626 | 246 | 118 | 1 | 81 | 326 | 75 | 319 | 9.00e-87 | 275 |
| Msa1252980 | MtrunA17_Chr4g0076441 | 27.817 | 284 | 173 | 8 | 85 | 359 | 26 | 286 | 7.69e-19 | 88.2 |
| Msa1252980 | MtrunA17_Chr3g0102691 | 29.630 | 270 | 161 | 9 | 85 | 346 | 26 | 274 | 1.05e-17 | 85.1 |
| Msa1252980 | MtrunA17_Chr2g0290661 | 31.944 | 216 | 128 | 6 | 90 | 298 | 38 | 241 | 4.05e-17 | 82.8 |
| Msa1252980 | MtrunA17_Chr3g0131581 | 28.467 | 274 | 171 | 11 | 35 | 303 | 11 | 264 | 1.71e-15 | 77.0 |
| Msa1252980 | MtrunA17_Chr4g0004981 | 27.727 | 220 | 135 | 10 | 91 | 301 | 126 | 330 | 7.70e-12 | 67.8 |
| Msa1252980 | MtrunA17_Chr1g0161441 | 26.316 | 247 | 158 | 10 | 64 | 304 | 3 | 231 | 1.24e-11 | 65.1 |
| Msa1252980 | MtrunA17_Chr1g0155071 | 26.636 | 214 | 134 | 7 | 91 | 301 | 46 | 239 | 2.03e-11 | 65.1 |
| Msa1252980 | MtrunA17_Chr8g0385291 | 29.130 | 230 | 136 | 10 | 91 | 310 | 182 | 394 | 2.22e-11 | 66.6 |
| Msa1252980 | MtrunA17_Chr8g0385681 | 28.063 | 253 | 148 | 10 | 61 | 304 | 21 | 248 | 7.17e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252980 | AT1G55690.2 | 56.918 | 636 | 232 | 15 | 1 | 605 | 1 | 625 | 0.0 | 650 |
| Msa1252980 | AT1G55690.4 | 56.918 | 636 | 232 | 15 | 1 | 605 | 1 | 625 | 0.0 | 650 |
| Msa1252980 | AT1G55690.1 | 56.918 | 636 | 232 | 15 | 1 | 605 | 1 | 625 | 0.0 | 650 |
| Msa1252980 | AT1G55690.5 | 56.918 | 636 | 232 | 15 | 1 | 605 | 1 | 625 | 0.0 | 650 |
| Msa1252980 | AT1G55690.3 | 56.577 | 631 | 233 | 14 | 1 | 601 | 1 | 620 | 0.0 | 639 |
| Msa1252980 | AT5G56160.1 | 47.665 | 621 | 263 | 11 | 1 | 605 | 1 | 575 | 0.0 | 541 |
| Msa1252980 | AT5G56160.3 | 47.665 | 621 | 263 | 11 | 1 | 605 | 1 | 575 | 0.0 | 541 |
| Msa1252980 | AT5G56160.2 | 65.205 | 342 | 115 | 2 | 1 | 338 | 1 | 342 | 3.43e-163 | 476 |
| Msa1252980 | AT4G39170.1 | 43.399 | 606 | 307 | 12 | 14 | 605 | 30 | 613 | 2.33e-158 | 468 |
| Msa1252980 | AT4G39170.2 | 43.399 | 606 | 305 | 13 | 14 | 605 | 30 | 611 | 1.52e-156 | 463 |
| Msa1252980 | AT2G21520.1 | 41.627 | 627 | 307 | 12 | 14 | 605 | 30 | 632 | 1.03e-151 | 451 |
| Msa1252980 | AT2G21520.2 | 41.627 | 627 | 307 | 12 | 14 | 605 | 34 | 636 | 1.14e-151 | 451 |
| Msa1252980 | AT2G21520.3 | 41.627 | 627 | 307 | 12 | 14 | 605 | 34 | 636 | 1.14e-151 | 451 |
| Msa1252980 | AT3G24840.7 | 44.992 | 589 | 267 | 16 | 14 | 596 | 23 | 560 | 3.26e-150 | 446 |
| Msa1252980 | AT3G24840.3 | 44.992 | 589 | 267 | 16 | 14 | 596 | 23 | 560 | 3.26e-150 | 446 |
| Msa1252980 | AT3G24840.5 | 44.992 | 589 | 267 | 16 | 14 | 596 | 23 | 560 | 3.26e-150 | 446 |
| Msa1252980 | AT3G24840.1 | 44.822 | 589 | 267 | 16 | 14 | 596 | 23 | 559 | 2.55e-149 | 443 |
| Msa1252980 | AT3G24840.6 | 44.822 | 589 | 267 | 16 | 14 | 596 | 23 | 559 | 2.55e-149 | 443 |
| Msa1252980 | AT3G24840.4 | 44.822 | 589 | 267 | 16 | 14 | 596 | 23 | 559 | 2.55e-149 | 443 |
| Msa1252980 | AT3G24840.2 | 44.822 | 589 | 267 | 16 | 14 | 596 | 23 | 559 | 2.55e-149 | 443 |
| Msa1252980 | AT1G19650.1 | 40.299 | 603 | 327 | 12 | 14 | 605 | 27 | 607 | 3.83e-127 | 387 |
| Msa1252980 | AT4G39180.3 | 51.253 | 359 | 161 | 4 | 11 | 357 | 15 | 371 | 4.91e-125 | 380 |
| Msa1252980 | AT4G39180.2 | 51.253 | 359 | 161 | 4 | 11 | 357 | 15 | 371 | 4.91e-125 | 380 |
| Msa1252980 | AT4G39180.1 | 53.754 | 333 | 149 | 3 | 11 | 340 | 15 | 345 | 6.08e-125 | 380 |
| Msa1252980 | AT2G21540.3 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.55e-124 | 378 |
| Msa1252980 | AT2G21540.5 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.55e-124 | 378 |
| Msa1252980 | AT2G21540.6 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.88e-124 | 378 |
| Msa1252980 | AT2G21540.2 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.88e-124 | 378 |
| Msa1252980 | AT2G21540.1 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.88e-124 | 378 |
| Msa1252980 | AT2G21540.4 | 53.666 | 341 | 150 | 4 | 11 | 348 | 15 | 350 | 1.88e-124 | 378 |
| Msa1252980 | AT4G34580.2 | 54.434 | 327 | 141 | 5 | 12 | 333 | 7 | 330 | 9.73e-122 | 371 |
| Msa1252980 | AT4G34580.1 | 54.434 | 327 | 141 | 5 | 12 | 333 | 7 | 330 | 9.73e-122 | 371 |
| Msa1252980 | AT1G75370.1 | 38.651 | 608 | 331 | 12 | 14 | 605 | 30 | 611 | 7.08e-120 | 369 |
| Msa1252980 | AT1G75370.2 | 38.953 | 611 | 328 | 13 | 14 | 605 | 30 | 614 | 1.16e-118 | 367 |
| Msa1252980 | AT4G36490.1 | 54.984 | 311 | 134 | 3 | 23 | 330 | 10 | 317 | 1.38e-118 | 363 |
| Msa1252980 | AT1G19650.3 | 50.390 | 385 | 180 | 7 | 14 | 393 | 27 | 405 | 1.71e-118 | 359 |
| Msa1252980 | AT2G18180.2 | 54.633 | 313 | 135 | 3 | 21 | 330 | 12 | 320 | 3.86e-118 | 362 |
| Msa1252980 | AT2G18180.1 | 54.633 | 313 | 135 | 3 | 21 | 330 | 12 | 320 | 5.04e-118 | 362 |
| Msa1252980 | AT2G16380.2 | 54.128 | 327 | 142 | 5 | 14 | 335 | 9 | 332 | 2.70e-116 | 357 |
| Msa1252980 | AT2G16380.1 | 54.128 | 327 | 142 | 5 | 14 | 335 | 9 | 332 | 2.70e-116 | 357 |
| Msa1252980 | AT1G19650.2 | 39.552 | 536 | 294 | 8 | 76 | 605 | 24 | 535 | 1.08e-115 | 355 |
| Msa1252980 | AT2G18180.4 | 61.826 | 241 | 91 | 1 | 90 | 330 | 10 | 249 | 1.27e-109 | 337 |
| Msa1252980 | AT2G18180.3 | 61.826 | 241 | 91 | 1 | 90 | 330 | 10 | 249 | 1.68e-109 | 338 |
| Msa1252980 | AT2G18180.5 | 61.883 | 223 | 84 | 1 | 108 | 330 | 1 | 222 | 4.54e-101 | 314 |
| Msa1252980 | AT2G16380.3 | 59.649 | 228 | 91 | 1 | 108 | 335 | 1 | 227 | 6.27e-97 | 303 |
| Msa1252980 | AT5G47510.2 | 51.154 | 260 | 123 | 2 | 68 | 324 | 26 | 284 | 3.58e-90 | 283 |
| Msa1252980 | AT5G47510.4 | 51.154 | 260 | 123 | 2 | 68 | 324 | 26 | 284 | 8.27e-90 | 283 |
| Msa1252980 | AT5G47510.1 | 51.154 | 260 | 123 | 2 | 68 | 324 | 25 | 283 | 9.02e-90 | 283 |
| Msa1252980 | AT5G47510.3 | 52.423 | 227 | 107 | 1 | 98 | 324 | 2 | 227 | 1.09e-82 | 262 |
| Msa1252980 | AT1G55840.1 | 31.646 | 237 | 147 | 6 | 85 | 317 | 31 | 256 | 5.96e-19 | 89.0 |
| Msa1252980 | AT1G55840.2 | 31.646 | 237 | 147 | 6 | 85 | 317 | 4 | 229 | 7.77e-19 | 87.8 |
| Msa1252980 | AT5G47730.4 | 30.233 | 215 | 131 | 5 | 91 | 298 | 39 | 241 | 5.08e-16 | 80.1 |
| Msa1252980 | AT5G47730.1 | 30.233 | 215 | 131 | 5 | 91 | 298 | 39 | 241 | 5.08e-16 | 80.1 |
Find 140 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGTTTAGGATTAGAATTT+TGG | 0.179579 | 8_2:-50117663 | Msa1252980:CDS |
| CTAAATGCAAGCTCATTTAT+TGG | 0.191638 | 8_2:-50116867 | Msa1252980:three_prime_UTR |
| GCCATTGCAAAATGATGATA+TGG | 0.233525 | 8_2:-50118140 | Msa1252980:CDS |
| ACTTGACGCATATAAGAAAT+TGG | 0.251963 | 8_2:+50117726 | None:intergenic |
| GTTCTTTGGAGGAAACAATT+TGG | 0.252962 | 8_2:-50121565 | Msa1252980:CDS |
| ACTAAGTTTCCTTTGTCTAA+TGG | 0.270733 | 8_2:+50118402 | None:intergenic |
| CAGGCACTTCGATCAGAAAT+TGG | 0.276437 | 8_2:-50117780 | Msa1252980:CDS |
| AAGTGTGCTGATATATCTTT+TGG | 0.288321 | 8_2:-50117707 | Msa1252980:CDS |
| AACATTACCTTCATTATATT+AGG | 0.291864 | 8_2:+50118915 | None:intergenic |
| GAAAATGCTTATGAGCTCTT+TGG | 0.319819 | 8_2:-50117467 | Msa1252980:CDS |
| CTGTATCTTTGCGATAGTTT+TGG | 0.320908 | 8_2:+50119346 | None:intergenic |
| GATGGTCCTCTATTTAGATT+TGG | 0.329211 | 8_2:-50116667 | Msa1252980:three_prime_UTR |
| CATTCAGATGTGGGAAGATA+TGG | 0.333166 | 8_2:-50121587 | Msa1252980:CDS |
| TCAATGCTGGTCCTGGCTTT+AGG | 0.333637 | 8_2:-50119406 | Msa1252980:CDS |
| GATATGCTCTTCCACAGTTT+AGG | 0.360724 | 8_2:-50117676 | Msa1252980:CDS |
| TGAAGACGTTCTTGTATAGA+TGG | 0.369051 | 8_2:+50117553 | None:intergenic |
| TGTGGGAAGATATGGTTCTT+TGG | 0.374248 | 8_2:-50121579 | Msa1252980:CDS |
| CCAAGCCTCTCAATGTAAAC+TGG | 0.379238 | 8_2:+50119857 | None:intergenic |
| AGCTGTAAAGATAATGCTTC+TGG | 0.386054 | 8_2:-50118211 | Msa1252980:CDS |
| CTGGCTTTAGGAAGATGCTT+TGG | 0.391128 | 8_2:-50119394 | Msa1252980:CDS |
| TAGGTATTTCCGCCGGTCTA+TGG | 0.392022 | 8_2:+50117500 | None:intergenic |
| TCATTAATCATTACTATGTC+AGG | 0.395677 | 8_2:-50122098 | Msa1252980:intron |
| TTAGTAAGAGCGAGATTTGA+AGG | 0.396950 | 8_2:+50116719 | None:intergenic |
| TTTGTAGTTGTGTTTGAAAA+TGG | 0.401093 | 8_2:+50118728 | None:intergenic |
| GCAAGACACACCCGTACCTT+TGG | 0.405328 | 8_2:+50118093 | None:intergenic |
| TCATCTCTAACATCTTCAAT+TGG | 0.410142 | 8_2:+50121816 | None:intergenic |
| GTAGTGGAGAGTGGAGAGAA+GGG | 0.411847 | 8_2:+50122227 | None:intergenic |
| TGTAATTTAAATAAAGACTT+TGG | 0.426001 | 8_2:+50119126 | None:intergenic |
| GCCTACTGCTGCCAATCTCT+TGG | 0.426130 | 8_2:-50119572 | Msa1252980:CDS |
| AAATTGGTTCGGCTTTGTTA+AGG | 0.430507 | 8_2:-50117764 | Msa1252980:CDS |
| CCAGTTTACATTGAGAGGCT+TGG | 0.438181 | 8_2:-50119857 | Msa1252980:CDS |
| AAACACTAAATTACAAAGGA+TGG | 0.449467 | 8_2:-50116602 | Msa1252980:three_prime_UTR |
| AGTTTCCTTTGTCTAATGGA+TGG | 0.453115 | 8_2:+50118406 | None:intergenic |
| GTAGAGCTCTCTCGAACTCC+TGG | 0.454796 | 8_2:+50119771 | None:intergenic |
| GTTGTTCATTGGAAACTTTG+AGG | 0.455809 | 8_2:+50118761 | None:intergenic |
| TGTAGTGGAGAGTGGAGAGA+AGG | 0.459599 | 8_2:+50122226 | None:intergenic |
| TGGATGTCTTAGATCAAGTA+AGG | 0.460310 | 8_2:-50118952 | Msa1252980:CDS |
| CAAAACTATCGCAAAGATAC+AGG | 0.460862 | 8_2:-50119345 | Msa1252980:intron |
| TCATTTATTGGACCCACAAA+AGG | 0.462330 | 8_2:-50116855 | Msa1252980:three_prime_UTR |
| TAGTAAGAGCGAGATTTGAA+GGG | 0.474837 | 8_2:+50116720 | None:intergenic |
| TGTGATAGCAGCCAAGAGAT+TGG | 0.475570 | 8_2:+50119561 | None:intergenic |
| AGGTTATCATGGAGTTGATA+AGG | 0.479015 | 8_2:-50119888 | Msa1252980:CDS |
| TATTACCCTCAAGGTTATCA+TGG | 0.482317 | 8_2:-50119899 | Msa1252980:CDS |
| ATATGTCAACAGCAGAATCT+TGG | 0.484810 | 8_2:-50118450 | Msa1252980:CDS |
| TATATCGTCAATGCTGGTCC+TGG | 0.487761 | 8_2:-50119413 | Msa1252980:CDS |
| GTGTGATAATGATCATGATT+AGG | 0.489636 | 8_2:+50121741 | None:intergenic |
| CAAAGCATCTTCCTAAAGCC+AGG | 0.490122 | 8_2:+50119395 | None:intergenic |
| GCCGACCAGTTTACATTGAG+AGG | 0.495905 | 8_2:-50119862 | Msa1252980:CDS |
| TCAAGAAACTTCTGAGCAGC+AGG | 0.496593 | 8_2:+50119371 | None:intergenic |
| TACAGAGAATTCCAAAGGTA+CGG | 0.497695 | 8_2:-50118104 | Msa1252980:CDS |
| GTTTCCTTTGTCTAATGGAT+GGG | 0.500173 | 8_2:+50118407 | None:intergenic |
| ACTTCGATCAGAAATTGGTT+CGG | 0.501529 | 8_2:-50117775 | Msa1252980:CDS |
| CCATTGCAAAATGATGATAT+GGG | 0.501678 | 8_2:-50118139 | Msa1252980:CDS |
| GGCGGAAATACCTATGGAAA+AGG | 0.503354 | 8_2:-50117491 | Msa1252980:CDS |
| CAACTCCATGATAACCTTGA+GGG | 0.508319 | 8_2:+50119894 | None:intergenic |
| CTAAGACATCCACCTTCTCC+AGG | 0.511880 | 8_2:+50118963 | None:intergenic |
| AATATTAGATGTACATGGCT+TGG | 0.512053 | 8_2:-50119690 | Msa1252980:intron |
| AAGCATTATCTTTACAGCTA+CGG | 0.514810 | 8_2:+50118215 | None:intergenic |
| CACTGTCCAAATCTAAATAG+AGG | 0.525238 | 8_2:+50116661 | None:intergenic |
| CATATCTTCCCACATCTGAA+TGG | 0.525456 | 8_2:+50121588 | None:intergenic |
| AGTATAGAGAATAACCCTCT+TGG | 0.533030 | 8_2:+50117408 | None:intergenic |
| GAATGATCCTAATATAATGA+AGG | 0.534117 | 8_2:-50118922 | Msa1252980:intron |
| AGATCAATTTCAATTTACTC+AGG | 0.536555 | 8_2:-50118167 | Msa1252980:CDS |
| TTAGATCAAGTAAGGGTCCA+TGG | 0.537543 | 8_2:-50118944 | Msa1252980:CDS |
| TTTGGGGTGGAAGGACTAGC+CGG | 0.538584 | 8_2:+50116509 | None:intergenic |
| AATCCATCGCTTTGATGCAA+TGG | 0.539148 | 8_2:+50119727 | None:intergenic |
| CAAATGTATATCGTCAATGC+TGG | 0.541743 | 8_2:-50119419 | Msa1252980:CDS |
| AACACTAAATTACAAAGGAT+GGG | 0.543472 | 8_2:-50116601 | Msa1252980:three_prime_UTR |
| AGTAAGAGCGAGATTTGAAG+GGG | 0.547056 | 8_2:+50116721 | None:intergenic |
| GGGAAGATATGGTTCTTTGG+AGG | 0.550950 | 8_2:-50121576 | Msa1252980:CDS |
| TGCTTATGAGCTCTTTGGAT+AGG | 0.551453 | 8_2:-50117462 | Msa1252980:CDS |
| GGTGGCTCGTGTAAATGTCC+TGG | 0.553097 | 8_2:-50118981 | Msa1252980:CDS |
| TAAGAAGGTCAAGAATAAGA+AGG | 0.555650 | 8_2:-50121926 | Msa1252980:CDS |
| TATCAAAACACCTTCTGAAG+AGG | 0.557541 | 8_2:-50117587 | Msa1252980:CDS |
| ACCACATTATGACAAAATCA+AGG | 0.557940 | 8_2:-50116558 | Msa1252980:three_prime_UTR |
| TGAGTAGTTGTTATCACCAC+AGG | 0.558230 | 8_2:-50116898 | Msa1252980:three_prime_UTR |
| AGATGTTAGAGATGAACAAG+AGG | 0.558465 | 8_2:-50121808 | Msa1252980:CDS |
| TGTGGAACTTAGCCATAGAC+CGG | 0.561162 | 8_2:-50117512 | Msa1252980:CDS |
| ATTATATTAGGATCATTCCA+TGG | 0.564352 | 8_2:+50118927 | None:intergenic |
| TAGACCGGCGGAAATACCTA+TGG | 0.565565 | 8_2:-50117497 | Msa1252980:CDS |
| CTCTCTCGAACTCCTGGACA+TGG | 0.567372 | 8_2:+50119777 | None:intergenic |
| CAGAAGATGAGAGATTAAGA+AGG | 0.569165 | 8_2:-50121941 | Msa1252980:CDS |
| CCATAGAGAAAACATAGGGA+TGG | 0.571456 | 8_2:-50116789 | Msa1252980:three_prime_UTR |
| TCATTTACATAGAGAAACAT+AGG | 0.573084 | 8_2:-50116695 | Msa1252980:three_prime_UTR |
| GCATTTAGTATTGTCTCCTG+TGG | 0.574944 | 8_2:+50116882 | None:intergenic |
| ATATTTAAAATACCATGTCC+AGG | 0.575974 | 8_2:-50119789 | Msa1252980:CDS |
| GCCTCTCAATGTAAACTGGT+CGG | 0.576699 | 8_2:+50119861 | None:intergenic |
| AACAAAGATGTTGTGTTGTG+TGG | 0.577161 | 8_2:+50122188 | None:intergenic |
| TCTGTCCATAGAGAAAACAT+AGG | 0.579494 | 8_2:-50116794 | Msa1252980:three_prime_UTR |
| ACAGAGAATTCCAAAGGTAC+GGG | 0.579677 | 8_2:-50118103 | Msa1252980:intron |
| GCTCCATTGCATCAAAGCGA+TGG | 0.582925 | 8_2:-50119730 | Msa1252980:CDS |
| TTGAGAAGACCATTCAGATG+TGG | 0.587288 | 8_2:-50121597 | Msa1252980:CDS |
| CTTGATGCGCATAACCACAA+TGG | 0.587615 | 8_2:-50119816 | Msa1252980:CDS |
| CTGTCCATAGAGAAAACATA+GGG | 0.587810 | 8_2:-50116793 | Msa1252980:three_prime_UTR |
| TGAGATACTGTAGTGGAGAG+TGG | 0.589168 | 8_2:+50122218 | None:intergenic |
| ATTGGACCCACAAAAGGCTG+AGG | 0.592411 | 8_2:-50116849 | Msa1252980:three_prime_UTR |
| CATTCTCTCAAGAAAACAAG+AGG | 0.592966 | 8_2:-50121864 | Msa1252980:CDS |
| TTAGTTTGTTCATAATGTGG+AGG | 0.594499 | 8_2:-50118803 | Msa1252980:intron |
| CATAGAGAAAACATAGGGAT+GGG | 0.594853 | 8_2:-50116788 | Msa1252980:three_prime_UTR |
| GTATTGCAATATTACCCTCA+AGG | 0.595104 | 8_2:-50119908 | Msa1252980:CDS |
| TAGATTTGGACAGTGTGGAG+AGG | 0.597314 | 8_2:-50116653 | Msa1252980:three_prime_UTR |
| CTATTTAGATTTGGACAGTG+TGG | 0.598345 | 8_2:-50116658 | Msa1252980:three_prime_UTR |
| TGAGAAGACCATTCAGATGT+GGG | 0.599172 | 8_2:-50121596 | Msa1252980:CDS |
| GAGAAACCTTACCTTGAGGA+TGG | 0.600349 | 8_2:+50121534 | None:intergenic |
| CTTGCCCATCCATTAGACAA+AGG | 0.602311 | 8_2:-50118411 | Msa1252980:CDS |
| GAGAACACAGAACAATATTG+TGG | 0.605661 | 8_2:-50117641 | Msa1252980:CDS |
| ATCATTATCACACACTCTTG+AGG | 0.610477 | 8_2:-50121731 | Msa1252980:intron |
| TTTGATGCAATGGAGCATGC+TGG | 0.613304 | 8_2:+50119737 | None:intergenic |
| AGAGAAACATAGGTATGAGA+TGG | 0.615039 | 8_2:-50116685 | Msa1252980:three_prime_UTR |
| ACCCACAAAAGGCTGAGGCA+AGG | 0.617538 | 8_2:-50116844 | Msa1252980:three_prime_UTR |
| TCAACTCCATGATAACCTTG+AGG | 0.626407 | 8_2:+50119893 | None:intergenic |
| TGGAACTGATACCATCCTCA+AGG | 0.627272 | 8_2:-50121545 | Msa1252980:intron |
| TGTAAATGTCCTGGAGAAGG+TGG | 0.627369 | 8_2:-50118972 | Msa1252980:CDS |
| ATGTACATCTAATATTGTTG+TGG | 0.630684 | 8_2:+50119697 | None:intergenic |
| CGACCTTGAAAATACCAAGA+GGG | 0.632338 | 8_2:-50117422 | Msa1252980:intron |
| GTTATGCGCATCAAGCGGCT+AGG | 0.632760 | 8_2:+50119824 | None:intergenic |
| AGAATACGATCCTCTTCAGA+AGG | 0.634299 | 8_2:+50117577 | None:intergenic |
| TACACGATATCATCGACTCT+AGG | 0.636683 | 8_2:-50119107 | Msa1252980:intron |
| AAAATTCTAATCCTAAACTG+TGG | 0.639752 | 8_2:+50117665 | None:intergenic |
| AAACAAACACTAAATTACAA+AGG | 0.639956 | 8_2:-50116606 | Msa1252980:three_prime_UTR |
| TATCATGGAGTTGATAAGGA+AGG | 0.642212 | 8_2:-50119884 | Msa1252980:CDS |
| TCGTGTAAATGTCCTGGAGA+AGG | 0.642895 | 8_2:-50118975 | Msa1252980:CDS |
| TTGTGGTTATGCGCATCAAG+CGG | 0.644616 | 8_2:+50119819 | None:intergenic |
| AACACAGAACAATATTGTGG+TGG | 0.644913 | 8_2:-50117638 | Msa1252980:CDS |
| TGATAATGATCATGATTAGG+AGG | 0.646729 | 8_2:+50121744 | None:intergenic |
| ACAACAATATTAGATGTACA+TGG | 0.648869 | 8_2:-50119695 | Msa1252980:CDS |
| ATTCTCTCAAGAAAACAAGA+GGG | 0.654597 | 8_2:-50121863 | Msa1252980:CDS |
| GCCAAGAGATTGGCAGCAGT+AGG | 0.654613 | 8_2:+50119571 | None:intergenic |
| CATTGCAAAATGATGATATG+GGG | 0.660842 | 8_2:-50118138 | Msa1252980:CDS |
| ATCTCACTGAGATACTGTAG+TGG | 0.667356 | 8_2:+50122211 | None:intergenic |
| CACTTCTTCATGATCAACTG+AGG | 0.669464 | 8_2:+50118366 | None:intergenic |
| GGATGTCTTAGATCAAGTAA+GGG | 0.672342 | 8_2:-50118951 | Msa1252980:CDS |
| ACTTGTACAGAGAATTCCAA+AGG | 0.675982 | 8_2:-50118109 | Msa1252980:CDS |
| GGCTGAGGCAAGGAATGACA+CGG | 0.676742 | 8_2:-50116834 | Msa1252980:three_prime_UTR |
| TGAGCTACTAGAGAATCTGA+AGG | 0.697572 | 8_2:-50117274 | Msa1252980:CDS |
| TGATCAACTGAGGCTAAACG+AGG | 0.699460 | 8_2:+50118376 | None:intergenic |
| ATGTTGTAAAATGAAAATGT+CGG | 0.713873 | 8_2:+50122125 | None:intergenic |
| TCGACCTTGAAAATACCAAG+AGG | 0.727189 | 8_2:-50117423 | Msa1252980:CDS |
| AGATAACAGTTACTACCCCG+AGG | 0.730209 | 8_2:-50119533 | Msa1252980:intron |
| GGAACTTAGCCATAGACCGG+CGG | 0.738146 | 8_2:-50117509 | Msa1252980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATAAATTAATTGTATTTTA+TGG | + | chr8_2:50118081-50118100 | None:intergenic | 10.0% |
| !!! | TATATATTATAACTTTTTGT+TGG | - | chr8_2:50119447-50119466 | Msa1252980:intron | 10.0% |
| !!! | TTTTTCAATAATCTTAATTT+GGG | - | chr8_2:50120710-50120729 | Msa1252980:intron | 10.0% |
| !! | TAATAAATAGTACTTATATT+CGG | + | chr8_2:50121612-50121631 | None:intergenic | 10.0% |
| !! | GTGAAATTTATATATATTTA+CGG | - | chr8_2:50121751-50121770 | Msa1252980:CDS | 10.0% |
| !!! | ATGCATTTTTGTTTATTATT+AGG | - | chr8_2:50117117-50117136 | Msa1252980:intron | 15.0% |
| !!! | TATTATGTTGATTGTTAATT+TGG | - | chr8_2:50117500-50117519 | Msa1252980:CDS | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | + | chr8_2:50117713-50117732 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | + | chr8_2:50117714-50117733 | None:intergenic | 15.0% |
| !! | GTTTGTATATGTATTAAATT+TGG | + | chr8_2:50117753-50117772 | None:intergenic | 15.0% |
| !! | TTTAATACATATACAAACAA+AGG | - | chr8_2:50117755-50117774 | Msa1252980:CDS | 15.0% |
| !! | AAGAAATGTAAAAAAAGTAA+AGG | - | chr8_2:50117837-50117856 | Msa1252980:intron | 15.0% |
| !! | AGAAATGTAAAAAAAGTAAA+GGG | - | chr8_2:50117838-50117857 | Msa1252980:intron | 15.0% |
| !!! | AAATTAATTGTATTTTATGG+AGG | + | chr8_2:50118078-50118097 | None:intergenic | 15.0% |
| !!! | ATATTTATTGATTATAGTAC+TGG | - | chr8_2:50118230-50118249 | Msa1252980:CDS | 15.0% |
| !! | TGTAATTTAAATAAAGACTT+TGG | + | chr8_2:50119639-50119658 | None:intergenic | 15.0% |
| !!! | GTTTTTCAATAATCTTAATT+TGG | - | chr8_2:50120709-50120728 | Msa1252980:intron | 15.0% |
| !!! | TTTTTTCTTTTTTTTTACTC+CGG | - | chr8_2:50122234-50122253 | Msa1252980:five_prime_UTR | 15.0% |
| !! | ATGTTGTAAAATGAAAATGT+CGG | + | chr8_2:50116640-50116659 | None:intergenic | 20.0% |
| !! | TTGAAATGTGATATGAAAAT+AGG | - | chr8_2:50116760-50116779 | Msa1252980:three_prime_UTR | 20.0% |
| !! | TGAAATGTGATATGAAAATA+GGG | - | chr8_2:50116761-50116780 | Msa1252980:three_prime_UTR | 20.0% |
| !! | GGAAAAACAAAATTGATTAT+AGG | - | chr8_2:50116920-50116939 | Msa1252980:exon | 20.0% |
| !!! | TCTCTTTCTATTTTCTTAAA+AGG | - | chr8_2:50117247-50117266 | Msa1252980:intron | 20.0% |
| !!! | GTTACAATTTTGATTAATGT+TGG | - | chr8_2:50117402-50117421 | Msa1252980:intron | 20.0% |
| !! | ATGGTTAGAAAATGAATATA+AGG | + | chr8_2:50117578-50117597 | None:intergenic | 20.0% |
| !! | AGACAAAAATAAAGTCAAAT+AGG | + | chr8_2:50117630-50117649 | None:intergenic | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | + | chr8_2:50117712-50117731 | None:intergenic | 20.0% |
| !! | TATACAAACAAAGGATAATA+TGG | - | chr8_2:50117764-50117783 | Msa1252980:CDS | 20.0% |
| !!! | AGTAATTAATTTTGTTGCAT+TGG | - | chr8_2:50117963-50117982 | Msa1252980:intron | 20.0% |
| !! | ATAATTGTAGAACATTTATG+AGG | + | chr8_2:50118290-50118309 | None:intergenic | 20.0% |
| !! | TTGATTGTAGAACATTTAAT+AGG | + | chr8_2:50118328-50118347 | None:intergenic | 20.0% |
| !! | TATATACAAGTTTAACTCAA+TGG | - | chr8_2:50118688-50118707 | Msa1252980:intron | 20.0% |
| !!! | ACTAAAACTGATGTTATTTT+GGG | + | chr8_2:50119272-50119291 | None:intergenic | 20.0% |
| !!! | TTTTTTGCTTATATTTACAG+AGG | - | chr8_2:50119554-50119573 | Msa1252980:CDS | 20.0% |
| !! | AATATAATGTAGTATGATGA+AGG | + | chr8_2:50119693-50119712 | None:intergenic | 20.0% |
| !!! | ACATTATATTTCTATTCAGA+TGG | - | chr8_2:50119703-50119722 | Msa1252980:CDS | 20.0% |
| !! | AACATTACCTTCATTATATT+AGG | + | chr8_2:50119850-50119869 | None:intergenic | 20.0% |
| !!! | ATTTTAGTTTGTTCATAATG+TGG | - | chr8_2:50119956-50119975 | Msa1252980:intron | 20.0% |
| !!! | GATGATATAATTTACTGATT+TGG | - | chr8_2:50120115-50120134 | Msa1252980:intron | 20.0% |
| !!! | AGATAAAACAGTATTTTGAA+TGG | + | chr8_2:50120503-50120522 | None:intergenic | 20.0% |
| !!! | TATTTTGTAACATTTGAAAG+TGG | - | chr8_2:50120885-50120904 | Msa1252980:intron | 20.0% |
| !!! | CAAATTCTCATATTTTTTAC+AGG | - | chr8_2:50120963-50120982 | Msa1252980:intron | 20.0% |
| !!! | AATTTTTTGTAATATGATGC+AGG | - | chr8_2:50121428-50121447 | Msa1252980:intron | 20.0% |
| !! | TCATAAAAAATGTGTATTCT+AGG | - | chr8_2:50121671-50121690 | Msa1252980:intron | 20.0% |
| !! | AAACAAACACTAAATTACAA+AGG | - | chr8_2:50122156-50122175 | Msa1252980:five_prime_UTR | 20.0% |
| ! | TCATTAATCATTACTATGTC+AGG | - | chr8_2:50116664-50116683 | Msa1252980:three_prime_UTR | 25.0% |
| ! | GAAATGTGATATGAAAATAG+GGG | - | chr8_2:50116762-50116781 | Msa1252980:three_prime_UTR | 25.0% |
| !!! | TTATTAGGTTTTTGAAAGCT+AGG | - | chr8_2:50117132-50117151 | Msa1252980:intron | 25.0% |
| !!! | TATTAGGTTTTTGAAAGCTA+GGG | - | chr8_2:50117133-50117152 | Msa1252980:intron | 25.0% |
| !! | ATTTCACCATTTTCCAAAAT+TGG | - | chr8_2:50117295-50117314 | Msa1252980:CDS | 25.0% |
| !!! | GTTGATTTGTTGACTAATTT+GGG | + | chr8_2:50117556-50117575 | None:intergenic | 25.0% |
| ! | CAAAAATAAAGTCAAATAGG+TGG | + | chr8_2:50117627-50117646 | None:intergenic | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | + | chr8_2:50117665-50117684 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | + | chr8_2:50117666-50117685 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr8_2:50117702-50117721 | None:intergenic | 25.0% |
| ! | AATGTAAAAAAAGTAAAGGG+AGG | - | chr8_2:50117841-50117860 | Msa1252980:intron | 25.0% |
| !! | ATTCTCATGATTTTGTAAAC+AGG | + | chr8_2:50117994-50118013 | None:intergenic | 25.0% |
| !! | TTTAAGAGTGACTTTTATTC+AGG | - | chr8_2:50118147-50118166 | Msa1252980:CDS | 25.0% |
| !! | TTAAGAGTGACTTTTATTCA+GGG | - | chr8_2:50118148-50118167 | Msa1252980:CDS | 25.0% |
| !!! | TTGTTTTTTTGCTTGTAGTA+CGG | - | chr8_2:50118196-50118215 | Msa1252980:CDS | 25.0% |
| !!! | ATCTTAGCTTTTTTTAGATC+AGG | + | chr8_2:50118383-50118402 | None:intergenic | 25.0% |
| ! | AAAGCTAAGATTAATGTCTA+TGG | - | chr8_2:50118392-50118411 | Msa1252980:CDS | 25.0% |
| ! | AGAATATGCTAAACATTGTA+GGG | + | chr8_2:50118441-50118460 | None:intergenic | 25.0% |
| ! | GAGCATTAAATTAGAGTAAT+TGG | - | chr8_2:50118483-50118502 | Msa1252980:intron | 25.0% |
| ! | CTCTAAATTTCATCATTAAC+AGG | - | chr8_2:50118511-50118530 | Msa1252980:intron | 25.0% |
| !! | AAAAGATGTTTTCCAGTTAA+AGG | - | chr8_2:50118662-50118681 | Msa1252980:intron | 25.0% |
| !! | AAAGATGTTTTCCAGTTAAA+GGG | - | chr8_2:50118663-50118682 | Msa1252980:intron | 25.0% |
| ! | TTGTATATATTCCCTTTAAC+TGG | + | chr8_2:50118677-50118696 | None:intergenic | 25.0% |
| ! | ATGTGTCTAATGATATTTGA+AGG | - | chr8_2:50118805-50118824 | Msa1252980:intron | 25.0% |
| !! | TTTTAAATATCGATCCATTG+TGG | + | chr8_2:50118963-50118982 | None:intergenic | 25.0% |
| !! | ATATTTAAAATACCATGTCC+AGG | - | chr8_2:50118973-50118992 | Msa1252980:CDS | 25.0% |
| ! | ATGTACATCTAATATTGTTG+TGG | + | chr8_2:50119068-50119087 | None:intergenic | 25.0% |
| ! | ACAACAATATTAGATGTACA+TGG | - | chr8_2:50119067-50119086 | Msa1252980:intron | 25.0% |
| !!! | GACTAAAACTGATGTTATTT+TGG | + | chr8_2:50119273-50119292 | None:intergenic | 25.0% |
| ! | AAGATAAATACATGTATCGT+TGG | + | chr8_2:50119530-50119549 | None:intergenic | 25.0% |
| ! | AAGTAATGCATTATATCAGT+AGG | + | chr8_2:50119593-50119612 | None:intergenic | 25.0% |
| !! | CATTACTTTCATGAATTTTC+AGG | - | chr8_2:50119605-50119624 | Msa1252980:intron | 25.0% |
| ! | ATTATATTAGGATCATTCCA+TGG | + | chr8_2:50119838-50119857 | None:intergenic | 25.0% |
| ! | GAATGATCCTAATATAATGA+AGG | - | chr8_2:50119840-50119859 | Msa1252980:CDS | 25.0% |
| ! | TTTGTAGTTGTGTTTGAAAA+TGG | + | chr8_2:50120037-50120056 | None:intergenic | 25.0% |
| !! | TTTTCAAACACAACTACAAA+AGG | - | chr8_2:50120037-50120056 | Msa1252980:intron | 25.0% |
| ! | TAACTCTTCTTGACAATAAA+TGG | - | chr8_2:50120066-50120085 | Msa1252980:intron | 25.0% |
| ! | TAATAACAAGTCTTCTCAAA+TGG | + | chr8_2:50120440-50120459 | None:intergenic | 25.0% |
| ! | AGATCAATTTCAATTTACTC+AGG | - | chr8_2:50120595-50120614 | Msa1252980:intron | 25.0% |
| !! | CAAAAATATTCCTTTGAAAG+TGG | - | chr8_2:50120770-50120789 | Msa1252980:intron | 25.0% |
| !! | ATATGAGAATTTGTTCAACA+TGG | + | chr8_2:50120854-50120873 | None:intergenic | 25.0% |
| ! | TTGTTCAACATGGAATATTA+AGG | + | chr8_2:50120946-50120965 | None:intergenic | 25.0% |
| !! | ATATGAGAATTTGTTCAACA+TGG | + | chr8_2:50120854-50120873 | None:intergenic | 25.0% |
| ! | AAAATTCTAATCCTAAACTG+TGG | + | chr8_2:50121100-50121119 | None:intergenic | 25.0% |
| !!! | ACAGTTTAGGATTAGAATTT+TGG | - | chr8_2:50121099-50121118 | Msa1252980:intron | 25.0% |
| !!! | GTGTTTTGATATCTTCTATA+AGG | + | chr8_2:50121166-50121185 | None:intergenic | 25.0% |
| ! | AAACCAACCTATGTTAATTT+AGG | - | chr8_2:50121696-50121715 | Msa1252980:intron | 25.0% |
| ! | AACCAACCTATGTTAATTTA+GGG | - | chr8_2:50121697-50121716 | Msa1252980:intron | 25.0% |
| ! | TCATTTACATAGAGAAACAT+AGG | - | chr8_2:50122067-50122086 | Msa1252980:intron | 25.0% |
| ! | AAACACTAAATTACAAAGGA+TGG | - | chr8_2:50122160-50122179 | Msa1252980:five_prime_UTR | 25.0% |
| ! | AACACTAAATTACAAAGGAT+GGG | - | chr8_2:50122161-50122180 | Msa1252980:five_prime_UTR | 25.0% |
| TAAGAAGGTCAAGAATAAGA+AGG | - | chr8_2:50116836-50116855 | Msa1252980:three_prime_UTR | 30.0% | |
| ATTCTCTCAAGAAAACAAGA+GGG | - | chr8_2:50116899-50116918 | Msa1252980:three_prime_UTR | 30.0% | |
| TCATCTCTAACATCTTCAAT+TGG | + | chr8_2:50116949-50116968 | None:intergenic | 30.0% | |
| ! | TGATAATGATCATGATTAGG+AGG | + | chr8_2:50117021-50117040 | None:intergenic | 30.0% |
| ! | GTGTGATAATGATCATGATT+AGG | + | chr8_2:50117024-50117043 | None:intergenic | 30.0% |
| TGGAAAATGGTGAAATTAAG+AGG | + | chr8_2:50117291-50117310 | None:intergenic | 30.0% | |
| ATCTTAGCCCAAATATTTGA+TGG | + | chr8_2:50117337-50117356 | None:intergenic | 30.0% | |
| TCAAATATTTGGGCTAAGAT+AGG | - | chr8_2:50117337-50117356 | Msa1252980:intron | 30.0% | |
| CAAATATTTGGGCTAAGATA+GGG | - | chr8_2:50117338-50117357 | Msa1252980:intron | 30.0% | |
| CTTGACATATTATCTGATGA+TGG | + | chr8_2:50117435-50117454 | None:intergenic | 30.0% | |
| !! | GGTTGATTTGTTGACTAATT+TGG | + | chr8_2:50117557-50117576 | None:intergenic | 30.0% |
| CAAATAGGTGGTTAGATATA+GGG | + | chr8_2:50117615-50117634 | None:intergenic | 30.0% | |
| TCAAATAGGTGGTTAGATAT+AGG | + | chr8_2:50117616-50117635 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | + | chr8_2:50117664-50117683 | None:intergenic | 30.0% | |
| !! | TTGAACTGAGTCTTGTTAAA+AGG | - | chr8_2:50118112-50118131 | Msa1252980:CDS | 30.0% |
| AATGTTCTACAATCAATCAC+TGG | - | chr8_2:50118332-50118351 | Msa1252980:intron | 30.0% | |
| GAGAATATGCTAAACATTGT+AGG | + | chr8_2:50118442-50118461 | None:intergenic | 30.0% | |
| AGCATATTCTCAGAAAAGTA+TGG | - | chr8_2:50118451-50118470 | Msa1252980:CDS | 30.0% | |
| GTTCTCTAAATGTACATAAG+AGG | - | chr8_2:50118548-50118567 | Msa1252980:intron | 30.0% | |
| AATATTAGATGTACATGGCT+TGG | - | chr8_2:50119072-50119091 | Msa1252980:intron | 30.0% | |
| ATAGTGTCATGTGTAATACA+GGG | - | chr8_2:50119152-50119171 | Msa1252980:intron | 30.0% | |
| AAGAGACAATGTAAAAACCT+CGG | + | chr8_2:50119249-50119268 | None:intergenic | 30.0% | |
| ! | GAGTTAGTTTACATAGTAAG+AGG | + | chr8_2:50119295-50119314 | None:intergenic | 30.0% |
| ! | TGCCTATATTTTGTTACAGA+GGG | + | chr8_2:50119487-50119506 | None:intergenic | 30.0% |
| ! | TTGCCTATATTTTGTTACAG+AGG | + | chr8_2:50119488-50119507 | None:intergenic | 30.0% |
| ! | GGCAAAAAAGTATATGTATC+TGG | - | chr8_2:50119503-50119522 | Msa1252980:intron | 30.0% |
| !!! | AGTCAATTGCCAGATTTTTT+GGG | - | chr8_2:50119760-50119779 | Msa1252980:CDS | 30.0% |
| !! | AGAGTATTGTGACACTAATT+TGG | - | chr8_2:50119925-50119944 | Msa1252980:CDS | 30.0% |
| ! | GAGTATTGTGACACTAATTT+GGG | - | chr8_2:50119926-50119945 | Msa1252980:CDS | 30.0% |
| !! | TTAGTTTGTTCATAATGTGG+AGG | - | chr8_2:50119959-50119978 | Msa1252980:intron | 30.0% |
| ! | GTCAATTTTCTGTTGTTCAT+TGG | + | chr8_2:50120015-50120034 | None:intergenic | 30.0% |
| CTTCTTGACAATAAATGGTT+TGG | - | chr8_2:50120071-50120090 | Msa1252980:intron | 30.0% | |
| AGACTTAAAGGACTGATATA+GGG | - | chr8_2:50120190-50120209 | Msa1252980:intron | 30.0% | |
| TATAGAAAAAATCACGCTTC+CGG | + | chr8_2:50120230-50120249 | None:intergenic | 30.0% | |
| ACTAAGTTTCCTTTGTCTAA+TGG | + | chr8_2:50120363-50120382 | None:intergenic | 30.0% | |
| !! | ACAGTATTTTGAATGGTTGA+AGG | + | chr8_2:50120496-50120515 | None:intergenic | 30.0% |
| ! | CAAAATACTGTTTTATCTGC+AGG | - | chr8_2:50120505-50120524 | Msa1252980:intron | 30.0% |
| AAGCATTATCTTTACAGCTA+CGG | + | chr8_2:50120550-50120569 | None:intergenic | 30.0% | |
| !! | ATCTCTTTTGAGCGTTTTTT+CGG | + | chr8_2:50120579-50120598 | None:intergenic | 30.0% |
| CCATTGCAAAATGATGATAT+GGG | - | chr8_2:50120623-50120642 | Msa1252980:intron | 30.0% | |
| CATTGCAAAATGATGATATG+GGG | - | chr8_2:50120624-50120643 | Msa1252980:intron | 30.0% | |
| GAAACTAAACAAGACAATCT+AGG | + | chr8_2:50120740-50120759 | None:intergenic | 30.0% | |
| GTTTCAATTTCCACTTTCAA+AGG | + | chr8_2:50120783-50120802 | None:intergenic | 30.0% | |
| AAACTCACTAGCAAGTATTT+CGG | - | chr8_2:50120914-50120933 | Msa1252980:intron | 30.0% | |
| ACTTGACGCATATAAGAAAT+TGG | + | chr8_2:50121039-50121058 | None:intergenic | 30.0% | |
| !! | AAGTGTGCTGATATATCTTT+TGG | - | chr8_2:50121055-50121074 | Msa1252980:intron | 30.0% |
| !! | GAAACTAGAAAAAGCATTTG+TGG | - | chr8_2:50121232-50121251 | Msa1252980:intron | 30.0% |
| ! | TTTTTGTAATATGATGCAGG+TGG | - | chr8_2:50121431-50121450 | Msa1252980:intron | 30.0% |
| ACCAACCTATGTTAATTTAG+GGG | - | chr8_2:50121698-50121717 | Msa1252980:intron | 30.0% | |
| AAACTCCCCTAAATTAACAT+AGG | + | chr8_2:50121706-50121725 | None:intergenic | 30.0% | |
| ! | TGTTAATTTAGGGGAGTTTT+AGG | - | chr8_2:50121707-50121726 | Msa1252980:intron | 30.0% |
| CTAAATGCAAGCTCATTTAT+TGG | - | chr8_2:50121895-50121914 | Msa1252980:CDS | 30.0% | |
| ACCACATTATGACAAAATCA+AGG | - | chr8_2:50122204-50122223 | Msa1252980:five_prime_UTR | 30.0% | |
| ! | TCCTTGATTTTGTCATAATG+TGG | + | chr8_2:50122208-50122227 | None:intergenic | 30.0% |
| AACAAAGATGTTGTGTTGTG+TGG | + | chr8_2:50116577-50116596 | None:intergenic | 35.0% | |
| CAGAAGATGAGAGATTAAGA+AGG | - | chr8_2:50116821-50116840 | Msa1252980:three_prime_UTR | 35.0% | |
| CATTCTCTCAAGAAAACAAG+AGG | - | chr8_2:50116898-50116917 | Msa1252980:three_prime_UTR | 35.0% | |
| AGATGTTAGAGATGAACAAG+AGG | - | chr8_2:50116954-50116973 | Msa1252980:intron | 35.0% | |
| ATCATTATCACACACTCTTG+AGG | - | chr8_2:50117031-50117050 | Msa1252980:intron | 35.0% | |
| ! | GTTCTTTGGAGGAAACAATT+TGG | - | chr8_2:50117197-50117216 | Msa1252980:intron | 35.0% |
| TTGGTCCTCCATCAAATATT+TGG | - | chr8_2:50117326-50117345 | Msa1252980:intron | 35.0% | |
| TGGTCCTCCATCAAATATTT+GGG | - | chr8_2:50117327-50117346 | Msa1252980:intron | 35.0% | |
| TTAGCCCAAATATTTGATGG+AGG | + | chr8_2:50117334-50117353 | None:intergenic | 35.0% | |
| ! | AATGAGTGAAGTGTTAGAAG+TGG | + | chr8_2:50117527-50117546 | None:intergenic | 35.0% |
| AGTAAAGGGAGGTTACATTA+AGG | - | chr8_2:50117852-50117871 | Msa1252980:intron | 35.0% | |
| GTAAAGGGAGGTTACATTAA+GGG | - | chr8_2:50117853-50117872 | Msa1252980:intron | 35.0% | |
| ! | GACGCTTAATTTGAGTCATA+AGG | - | chr8_2:50117940-50117959 | Msa1252980:intron | 35.0% |
| !! | CTTTTATTCAGGGAAAGTGT+TGG | - | chr8_2:50118158-50118177 | Msa1252980:CDS | 35.0% |
| ! | TTTGCTTGTAGTACGGATTA+TGG | - | chr8_2:50118203-50118222 | Msa1252980:CDS | 35.0% |
| !! | TTATAGTACTGGTTAGACTC+TGG | - | chr8_2:50118241-50118260 | Msa1252980:intron | 35.0% |
| TACAATCAATCACTGGTAGT+AGG | - | chr8_2:50118339-50118358 | Msa1252980:intron | 35.0% | |
| TCATCATTAACAGGTTGCAT+TGG | - | chr8_2:50118520-50118539 | Msa1252980:intron | 35.0% | |
| ! | GGATTTTGAATTTGAAGAGC+TGG | - | chr8_2:50118826-50118845 | Msa1252980:intron | 35.0% |
| GTATTGCAATATTACCCTCA+AGG | - | chr8_2:50118854-50118873 | Msa1252980:intron | 35.0% | |
| TATTACCCTCAAGGTTATCA+TGG | - | chr8_2:50118863-50118882 | Msa1252980:intron | 35.0% | |
| !! | AGGTTATCATGGAGTTGATA+AGG | - | chr8_2:50118874-50118893 | Msa1252980:intron | 35.0% |
| !! | TATCATGGAGTTGATAAGGA+AGG | - | chr8_2:50118878-50118897 | Msa1252980:intron | 35.0% |
| GATAGTGTCATGTGTAATAC+AGG | - | chr8_2:50119151-50119170 | Msa1252980:intron | 35.0% | |
| AGAGACAATGTAAAAACCTC+GGG | + | chr8_2:50119248-50119267 | None:intergenic | 35.0% | |
| CAAATGTATATCGTCAATGC+TGG | - | chr8_2:50119343-50119362 | Msa1252980:intron | 35.0% | |
| ! | CTGTATCTTTGCGATAGTTT+TGG | + | chr8_2:50119419-50119438 | None:intergenic | 35.0% |
| CAAAACTATCGCAAAGATAC+AGG | - | chr8_2:50119417-50119436 | Msa1252980:CDS | 35.0% | |
| CTCCCTCTGTAACAAAATAT+AGG | - | chr8_2:50119482-50119501 | Msa1252980:intron | 35.0% | |
| CATTATATCAGTAGGACTTC+AGG | + | chr8_2:50119585-50119604 | None:intergenic | 35.0% | |
| !!! | CAGTCAATTGCCAGATTTTT+TGG | - | chr8_2:50119759-50119778 | Msa1252980:CDS | 35.0% |
| TGGATGTCTTAGATCAAGTA+AGG | - | chr8_2:50119810-50119829 | Msa1252980:CDS | 35.0% | |
| GGATGTCTTAGATCAAGTAA+GGG | - | chr8_2:50119811-50119830 | Msa1252980:CDS | 35.0% | |
| CACAATACTCTAGATGAACA+TGG | + | chr8_2:50119916-50119935 | None:intergenic | 35.0% | |
| GTTGTTCATTGGAAACTTTG+AGG | + | chr8_2:50120004-50120023 | None:intergenic | 35.0% | |
| ATGTACGTCTTGAGACTTAA+AGG | - | chr8_2:50120178-50120197 | Msa1252980:intron | 35.0% | |
| GAGACTTAAAGGACTGATAT+AGG | - | chr8_2:50120189-50120208 | Msa1252980:intron | 35.0% | |
| TTAAAGGACTGATATAGGGT+CGG | - | chr8_2:50120194-50120213 | Msa1252980:intron | 35.0% | |
| ATATGTCAACAGCAGAATCT+TGG | - | chr8_2:50120312-50120331 | Msa1252980:intron | 35.0% | |
| ! | GTTTCCTTTGTCTAATGGAT+GGG | + | chr8_2:50120358-50120377 | None:intergenic | 35.0% |
| AGTTTCCTTTGTCTAATGGA+TGG | + | chr8_2:50120359-50120378 | None:intergenic | 35.0% | |
| ! | GATCATGAAGAAGTGAGTTT+TGG | - | chr8_2:50120404-50120423 | Msa1252980:intron | 35.0% |
| AGTCTTCTCAAATGGTTCAA+AGG | + | chr8_2:50120432-50120451 | None:intergenic | 35.0% | |
| AGCTGTAAAGATAATGCTTC+TGG | - | chr8_2:50120551-50120570 | Msa1252980:intron | 35.0% | |
| GCCATTGCAAAATGATGATA+TGG | - | chr8_2:50120622-50120641 | Msa1252980:intron | 35.0% | |
| ! | CCCATATCATCATTTTGCAA+TGG | + | chr8_2:50120626-50120645 | None:intergenic | 35.0% |
| ACTTGTACAGAGAATTCCAA+AGG | - | chr8_2:50120653-50120672 | Msa1252980:intron | 35.0% | |
| TACAGAGAATTCCAAAGGTA+CGG | - | chr8_2:50120658-50120677 | Msa1252980:intron | 35.0% | |
| ACTTCGATCAGAAATTGGTT+CGG | - | chr8_2:50120987-50121006 | Msa1252980:intron | 35.0% | |
| !! | AAATTGGTTCGGCTTTGTTA+AGG | - | chr8_2:50120998-50121017 | Msa1252980:intron | 35.0% |
| GAGAACACAGAACAATATTG+TGG | - | chr8_2:50121121-50121140 | Msa1252980:intron | 35.0% | |
| AACACAGAACAATATTGTGG+TGG | - | chr8_2:50121124-50121143 | Msa1252980:intron | 35.0% | |
| ! | TATCAAAACACCTTCTGAAG+AGG | - | chr8_2:50121175-50121194 | Msa1252980:intron | 35.0% |
| TGAAGACGTTCTTGTATAGA+TGG | + | chr8_2:50121212-50121231 | None:intergenic | 35.0% | |
| ! | AGCATTTTCTCCTTTTCCAT+AGG | + | chr8_2:50121284-50121303 | None:intergenic | 35.0% |
| GAAAATGCTTATGAGCTCTT+TGG | - | chr8_2:50121295-50121314 | Msa1252980:intron | 35.0% | |
| ! | TAACCCTCTTGGTATTTTCA+AGG | + | chr8_2:50121346-50121365 | None:intergenic | 35.0% |
| AGTATAGAGAATAACCCTCT+TGG | + | chr8_2:50121357-50121376 | None:intergenic | 35.0% | |
| TCCCCTAAATTAACATAGGT+TGG | + | chr8_2:50121702-50121721 | None:intergenic | 35.0% | |
| !!! | GAGTTTTAGGAATGACTTCA+TGG | - | chr8_2:50121720-50121739 | Msa1252980:intron | 35.0% |
| !! | TTTTAGGAATGACTTCATGG+TGG | - | chr8_2:50121723-50121742 | Msa1252980:intron | 35.0% |
| !! | CAAAGAAGACTGTTTTGTTG+AGG | - | chr8_2:50121840-50121859 | Msa1252980:CDS | 35.0% |
| TCATTTATTGGACCCACAAA+AGG | - | chr8_2:50121907-50121926 | Msa1252980:CDS | 35.0% | |
| TCTGTCCATAGAGAAAACAT+AGG | - | chr8_2:50121968-50121987 | Msa1252980:CDS | 35.0% | |
| CTGTCCATAGAGAAAACATA+GGG | - | chr8_2:50121969-50121988 | Msa1252980:CDS | 35.0% | |
| CATAGAGAAAACATAGGGAT+GGG | - | chr8_2:50121974-50121993 | Msa1252980:CDS | 35.0% | |
| TAGTAAGAGCGAGATTTGAA+GGG | + | chr8_2:50122045-50122064 | None:intergenic | 35.0% | |
| TTAGTAAGAGCGAGATTTGA+AGG | + | chr8_2:50122046-50122065 | None:intergenic | 35.0% | |
| AGAGAAACATAGGTATGAGA+TGG | - | chr8_2:50122077-50122096 | Msa1252980:intron | 35.0% | |
| GATGGTCCTCTATTTAGATT+TGG | - | chr8_2:50122095-50122114 | Msa1252980:intron | 35.0% | |
| CACTGTCCAAATCTAAATAG+AGG | + | chr8_2:50122104-50122123 | None:intergenic | 35.0% | |
| CTATTTAGATTTGGACAGTG+TGG | - | chr8_2:50122104-50122123 | Msa1252980:exon | 35.0% | |
| ATCTCACTGAGATACTGTAG+TGG | + | chr8_2:50116554-50116573 | None:intergenic | 40.0% | |
| TTGAGAAGACCATTCAGATG+TGG | - | chr8_2:50117165-50117184 | Msa1252980:intron | 40.0% | |
| TGAGAAGACCATTCAGATGT+GGG | - | chr8_2:50117166-50117185 | Msa1252980:intron | 40.0% | |
| CATATCTTCCCACATCTGAA+TGG | + | chr8_2:50117177-50117196 | None:intergenic | 40.0% | |
| CATTCAGATGTGGGAAGATA+TGG | - | chr8_2:50117175-50117194 | Msa1252980:intron | 40.0% | |
| TGTGGGAAGATATGGTTCTT+TGG | - | chr8_2:50117183-50117202 | Msa1252980:intron | 40.0% | |
| GAAAGAGAAACCTTACCTTG+AGG | + | chr8_2:50117235-50117254 | None:intergenic | 40.0% | |
| TTTGATGGAGGACCAAAACT+GGG | + | chr8_2:50117322-50117341 | None:intergenic | 40.0% | |
| ATTTGATGGAGGACCAAAAC+TGG | + | chr8_2:50117323-50117342 | None:intergenic | 40.0% | |
| TAGGTGGTTAGATATAGGGA+CGG | + | chr8_2:50117611-50117630 | None:intergenic | 40.0% | |
| ! | CTTGTAGTACGGATTATGGT+TGG | - | chr8_2:50118207-50118226 | Msa1252980:CDS | 40.0% |
| CAACTCCATGATAACCTTGA+GGG | + | chr8_2:50118871-50118890 | None:intergenic | 40.0% | |
| TCAACTCCATGATAACCTTG+AGG | + | chr8_2:50118872-50118891 | None:intergenic | 40.0% | |
| AATCCATCGCTTTGATGCAA+TGG | + | chr8_2:50119038-50119057 | None:intergenic | 40.0% | |
| !! | ATGTACATGGCTTGGTATGT+AGG | - | chr8_2:50119080-50119099 | Msa1252980:intron | 40.0% |
| GAGACAATGTAAAAACCTCG+GGG | + | chr8_2:50119247-50119266 | None:intergenic | 40.0% | |
| TGTCTGCAAATACACGTTGA+CGG | + | chr8_2:50119317-50119336 | None:intergenic | 40.0% | |
| !! | TACACGATATCATCGACTCT+AGG | - | chr8_2:50119655-50119674 | Msa1252980:intron | 40.0% |
| !!! | CAATTGCCAGATTTTTTGGG+TGG | - | chr8_2:50119763-50119782 | Msa1252980:CDS | 40.0% |
| TTAGATCAAGTAAGGGTCCA+TGG | - | chr8_2:50119818-50119837 | Msa1252980:CDS | 40.0% | |
| GTCTCAAGACGTACATATCA+GGG | + | chr8_2:50120174-50120193 | None:intergenic | 40.0% | |
| AGTCTCAAGACGTACATATC+AGG | + | chr8_2:50120175-50120194 | None:intergenic | 40.0% | |
| ! | ACATCCTTTTCTCAACTTGC+AGG | - | chr8_2:50120277-50120296 | Msa1252980:intron | 40.0% |
| ! | CATCCTTTTCTCAACTTGCA+GGG | - | chr8_2:50120278-50120297 | Msa1252980:intron | 40.0% |
| CACTTCTTCATGATCAACTG+AGG | + | chr8_2:50120399-50120418 | None:intergenic | 40.0% | |
| ! | TACTGTTTTATCTGCAGGCT+AGG | - | chr8_2:50120510-50120529 | Msa1252980:intron | 40.0% |
| ! | ACTGTTTTATCTGCAGGCTA+GGG | - | chr8_2:50120511-50120530 | Msa1252980:intron | 40.0% |
| ! | ACAGAGAATTCCAAAGGTAC+GGG | - | chr8_2:50120659-50120678 | Msa1252980:intron | 40.0% |
| ACCATATGTACTGTTCCTGT+CGG | - | chr8_2:50120805-50120824 | Msa1252980:intron | 40.0% | |
| GATATGCTCTTCCACAGTTT+AGG | - | chr8_2:50121086-50121105 | Msa1252980:intron | 40.0% | |
| AGAATACGATCCTCTTCAGA+AGG | + | chr8_2:50121188-50121207 | None:intergenic | 40.0% | |
| ! | TTTTCCATAGGTATTTCCGC+CGG | + | chr8_2:50121272-50121291 | None:intergenic | 40.0% |
| TGCTTATGAGCTCTTTGGAT+AGG | - | chr8_2:50121300-50121319 | Msa1252980:intron | 40.0% | |
| TCGACCTTGAAAATACCAAG+AGG | - | chr8_2:50121339-50121358 | Msa1252980:intron | 40.0% | |
| CGACCTTGAAAATACCAAGA+GGG | - | chr8_2:50121340-50121359 | Msa1252980:intron | 40.0% | |
| TGAGTAGTTGTTATCACCAC+AGG | - | chr8_2:50121864-50121883 | Msa1252980:CDS | 40.0% | |
| GCATTTAGTATTGTCTCCTG+TGG | + | chr8_2:50121883-50121902 | None:intergenic | 40.0% | |
| ! | CCATCCCTATGTTTTCTCTA+TGG | + | chr8_2:50121976-50121995 | None:intergenic | 40.0% |
| CCATAGAGAAAACATAGGGA+TGG | - | chr8_2:50121973-50121992 | Msa1252980:CDS | 40.0% | |
| AGTAAGAGCGAGATTTGAAG+GGG | + | chr8_2:50122044-50122063 | None:intergenic | 40.0% | |
| ! | TGAGATACTGTAGTGGAGAG+TGG | + | chr8_2:50116547-50116566 | None:intergenic | 45.0% |
| GGGAAGATATGGTTCTTTGG+AGG | - | chr8_2:50117186-50117205 | Msa1252980:intron | 45.0% | |
| TGGAACTGATACCATCCTCA+AGG | - | chr8_2:50117217-50117236 | Msa1252980:intron | 45.0% | |
| CTGATACCATCCTCAAGGTA+AGG | - | chr8_2:50117222-50117241 | Msa1252980:intron | 45.0% | |
| GAGAAACCTTACCTTGAGGA+TGG | + | chr8_2:50117231-50117250 | None:intergenic | 45.0% | |
| !! | CTGGGGCCAATTTTGGAAAA+TGG | + | chr8_2:50117304-50117323 | None:intergenic | 45.0% |
| ! | TCCAAAATTGGCCCCAGTTT+TGG | - | chr8_2:50117307-50117326 | Msa1252980:CDS | 45.0% |
| ! | ACCAAAACTGGGGCCAATTT+TGG | + | chr8_2:50117311-50117330 | None:intergenic | 45.0% |
| TTGATGGAGGACCAAAACTG+GGG | + | chr8_2:50117321-50117340 | None:intergenic | 45.0% | |
| TGGTTAGATATAGGGACGGA+GGG | + | chr8_2:50117607-50117626 | None:intergenic | 45.0% | |
| AGGGAGGTTACATTAAGGGA+CGG | - | chr8_2:50117857-50117876 | Msa1252980:intron | 45.0% | |
| AGGTTACATTAAGGGACGGA+GGG | - | chr8_2:50117861-50117880 | Msa1252980:intron | 45.0% | |
| GCCTCTCAATGTAAACTGGT+CGG | + | chr8_2:50118904-50118923 | None:intergenic | 45.0% | |
| CCAAGCCTCTCAATGTAAAC+TGG | + | chr8_2:50118908-50118927 | None:intergenic | 45.0% | |
| CCAGTTTACATTGAGAGGCT+TGG | - | chr8_2:50118905-50118924 | Msa1252980:intron | 45.0% | |
| TTGTGGTTATGCGCATCAAG+CGG | + | chr8_2:50118946-50118965 | None:intergenic | 45.0% | |
| CTTGATGCGCATAACCACAA+TGG | - | chr8_2:50118946-50118965 | Msa1252980:CDS | 45.0% | |
| TTTGATGCAATGGAGCATGC+TGG | + | chr8_2:50119028-50119047 | None:intergenic | 45.0% | |
| TGTGATAGCAGCCAAGAGAT+TGG | + | chr8_2:50119204-50119223 | None:intergenic | 45.0% | |
| AGATAACAGTTACTACCCCG+AGG | - | chr8_2:50119229-50119248 | Msa1252980:intron | 45.0% | |
| TATATCGTCAATGCTGGTCC+TGG | - | chr8_2:50119349-50119368 | Msa1252980:CDS | 45.0% | |
| ! | CAAAGCATCTTCCTAAAGCC+AGG | + | chr8_2:50119370-50119389 | None:intergenic | 45.0% |
| !! | CTGGCTTTAGGAAGATGCTT+TGG | - | chr8_2:50119368-50119387 | Msa1252980:CDS | 45.0% |
| TCAAGAAACTTCTGAGCAGC+AGG | + | chr8_2:50119394-50119413 | None:intergenic | 45.0% | |
| TCGTGTAAATGTCCTGGAGA+AGG | - | chr8_2:50119787-50119806 | Msa1252980:CDS | 45.0% | |
| TGTAAATGTCCTGGAGAAGG+TGG | - | chr8_2:50119790-50119809 | Msa1252980:CDS | 45.0% | |
| CTTGCCCATCCATTAGACAA+AGG | - | chr8_2:50120351-50120370 | Msa1252980:intron | 45.0% | |
| TGATCAACTGAGGCTAAACG+AGG | + | chr8_2:50120389-50120408 | None:intergenic | 45.0% | |
| CCATATGTACTGTTCCTGTC+GGG | - | chr8_2:50120806-50120825 | Msa1252980:intron | 45.0% | |
| CAGGCACTTCGATCAGAAAT+TGG | - | chr8_2:50120982-50121001 | Msa1252980:intron | 45.0% | |
| TGTGGAACTTAGCCATAGAC+CGG | - | chr8_2:50121250-50121269 | Msa1252980:intron | 45.0% | |
| GGCGGAAATACCTATGGAAA+AGG | - | chr8_2:50121271-50121290 | Msa1252980:intron | 45.0% | |
| TAGATTTGGACAGTGTGGAG+AGG | - | chr8_2:50122109-50122128 | Msa1252980:five_prime_UTR | 45.0% | |
| ! | GTAGTGGAGAGTGGAGAGAA+GGG | + | chr8_2:50116538-50116557 | None:intergenic | 50.0% |
| ! | TGTAGTGGAGAGTGGAGAGA+AGG | + | chr8_2:50116539-50116558 | None:intergenic | 50.0% |
| TAGGGACGGAGGGAGTAAAA+TGG | + | chr8_2:50117597-50117616 | None:intergenic | 50.0% | |
| GTGGTTAGATATAGGGACGG+AGG | + | chr8_2:50117608-50117627 | None:intergenic | 50.0% | |
| GAGGTTACATTAAGGGACGG+AGG | - | chr8_2:50117860-50117879 | Msa1252980:intron | 50.0% | |
| GCCGACCAGTTTACATTGAG+AGG | - | chr8_2:50118900-50118919 | Msa1252980:intron | 50.0% | |
| GCTCCATTGCATCAAAGCGA+TGG | - | chr8_2:50119032-50119051 | Msa1252980:intron | 50.0% | |
| ! | TCAATGCTGGTCCTGGCTTT+AGG | - | chr8_2:50119356-50119375 | Msa1252980:CDS | 50.0% |
| CACGAGCCACCCAAAAAATC+TGG | + | chr8_2:50119772-50119791 | None:intergenic | 50.0% | |
| CTAAGACATCCACCTTCTCC+AGG | + | chr8_2:50119802-50119821 | None:intergenic | 50.0% | |
| TAGGGTCGGACTTTAAGCAC+CGG | - | chr8_2:50120208-50120227 | Msa1252980:intron | 50.0% | |
| ! | CGTCCCTGCAAGTTGAGAAA+AGG | + | chr8_2:50120284-50120303 | None:intergenic | 50.0% |
| CCCGACAGGAACAGTACATA+TGG | + | chr8_2:50120809-50120828 | None:intergenic | 50.0% | |
| CGATACTAATCACACCCGAC+AGG | + | chr8_2:50120823-50120842 | None:intergenic | 50.0% | |
| TAGGTATTTCCGCCGGTCTA+TGG | + | chr8_2:50121265-50121284 | None:intergenic | 50.0% | |
| TAGACCGGCGGAAATACCTA+TGG | - | chr8_2:50121265-50121284 | Msa1252980:intron | 50.0% | |
| ATTGGACCCACAAAAGGCTG+AGG | - | chr8_2:50121913-50121932 | Msa1252980:CDS | 50.0% | |
| ! | TCCTTGCCTCAGCCTTTTGT+GGG | + | chr8_2:50121922-50121941 | None:intergenic | 50.0% |
| ! | TTCCTTGCCTCAGCCTTTTG+TGG | + | chr8_2:50121923-50121942 | None:intergenic | 50.0% |
| GTTATGCGCATCAAGCGGCT+AGG | + | chr8_2:50118941-50118960 | None:intergenic | 55.0% | |
| CTCTCTCGAACTCCTGGACA+TGG | + | chr8_2:50118988-50119007 | None:intergenic | 55.0% | |
| GTAGAGCTCTCTCGAACTCC+TGG | + | chr8_2:50118994-50119013 | None:intergenic | 55.0% | |
| GGAGTTCGAGAGAGCTCTAC+AGG | - | chr8_2:50118994-50119013 | Msa1252980:CDS | 55.0% | |
| GCCTACTGCTGCCAATCTCT+TGG | - | chr8_2:50119190-50119209 | Msa1252980:intron | 55.0% | |
| GCCAAGAGATTGGCAGCAGT+AGG | + | chr8_2:50119194-50119213 | None:intergenic | 55.0% | |
| GGTGGCTCGTGTAAATGTCC+TGG | - | chr8_2:50119781-50119800 | Msa1252980:CDS | 55.0% | |
| GCAAGACACACCCGTACCTT+TGG | + | chr8_2:50120672-50120691 | None:intergenic | 55.0% | |
| AAGGTACGGGTGTGTCTTGC+AGG | - | chr8_2:50120672-50120691 | Msa1252980:intron | 55.0% | |
| AGGTACGGGTGTGTCTTGCA+GGG | - | chr8_2:50120673-50120692 | Msa1252980:intron | 55.0% | |
| GGAACTTAGCCATAGACCGG+CGG | - | chr8_2:50121253-50121272 | Msa1252980:intron | 55.0% | |
| ACCCACAAAAGGCTGAGGCA+AGG | - | chr8_2:50121918-50121937 | Msa1252980:CDS | 55.0% | |
| GGCTGAGGCAAGGAATGACA+CGG | - | chr8_2:50121928-50121947 | Msa1252980:CDS | 55.0% | |
| ! | TTTGGGGTGGAAGGACTAGC+CGG | + | chr8_2:50122256-50122275 | None:intergenic | 55.0% |
| GGTACGGGTGTGTCTTGCAG+GGG | - | chr8_2:50120674-50120693 | Msa1252980:intron | 60.0% | |
| GTACGGGTGTGTCTTGCAGG+GGG | - | chr8_2:50120675-50120694 | Msa1252980:intron | 60.0% | |
| TACGGGTGTGTCTTGCAGGG+GGG | - | chr8_2:50120676-50120695 | Msa1252980:intron | 60.0% | |
| ACGGGTGTGTCTTGCAGGGG+GGG | - | chr8_2:50120677-50120696 | Msa1252980:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 50116504 | 50122280 | 50116504 | ID=Msa1252980;Name=Msa1252980 |
| chr8_2 | mRNA | 50116504 | 50122280 | 50116504 | ID=Msa1252980-mRNA-1;Parent=Msa1252980;Name=Msa1252980-mRNA-1;_AED=0.10;_eAED=0.10;_QI=175|0.92|0.92|1|1|1|14|420|605 |
| chr8_2 | exon | 50116504 | 50116944 | 50116504 | ID=Msa1252980-mRNA-1:exon:15292;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50117260 | 50117334 | 50117260 | ID=Msa1252980-mRNA-1:exon:15291;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50117423 | 50117799 | 50117423 | ID=Msa1252980-mRNA-1:exon:15290;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50118104 | 50118257 | 50118104 | ID=Msa1252980-mRNA-1:exon:15289;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50118369 | 50118485 | 50118369 | ID=Msa1252980-mRNA-1:exon:15288;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50118726 | 50118821 | 50118726 | ID=Msa1252980-mRNA-1:exon:15287;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50118923 | 50119022 | 50118923 | ID=Msa1252980-mRNA-1:exon:15286;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50119108 | 50119157 | 50119108 | ID=Msa1252980-mRNA-1:exon:15285;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50119346 | 50119450 | 50119346 | ID=Msa1252980-mRNA-1:exon:15284;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50119534 | 50119611 | 50119534 | ID=Msa1252980-mRNA-1:exon:15283;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50119691 | 50119957 | 50119691 | ID=Msa1252980-mRNA-1:exon:15282;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50121546 | 50121645 | 50121546 | ID=Msa1252980-mRNA-1:exon:15281;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50121732 | 50122002 | 50121732 | ID=Msa1252980-mRNA-1:exon:15280;Parent=Msa1252980-mRNA-1 |
| chr8_2 | exon | 50122099 | 50122280 | 50122099 | ID=Msa1252980-mRNA-1:exon:15279;Parent=Msa1252980-mRNA-1 |
| chr8_2 | five_prime_UTR | 50122106 | 50122280 | 50122106 | ID=Msa1252980-mRNA-1:five_prime_utr;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50122099 | 50122105 | 50122099 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50121732 | 50122002 | 50121732 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50121546 | 50121645 | 50121546 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50119691 | 50119957 | 50119691 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50119534 | 50119611 | 50119534 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50119346 | 50119450 | 50119346 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50119108 | 50119157 | 50119108 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50118923 | 50119022 | 50118923 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50118726 | 50118821 | 50118726 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50118369 | 50118485 | 50118369 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50118104 | 50118257 | 50118104 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50117423 | 50117799 | 50117423 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50117260 | 50117334 | 50117260 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | CDS | 50116924 | 50116944 | 50116924 | ID=Msa1252980-mRNA-1:cds;Parent=Msa1252980-mRNA-1 |
| chr8_2 | three_prime_UTR | 50116504 | 50116923 | 50116504 | ID=Msa1252980-mRNA-1:three_prime_utr;Parent=Msa1252980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
