Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254010 | XP_003629192.1 | 89.375 | 320 | 32 | 1 | 1 | 318 | 1 | 320 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254010 | sp|P36907|CHIX_PEA | 73.750 | 320 | 82 | 1 | 1 | 318 | 1 | 320 | 4.65e-173 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254010 | G7LA77 | 89.375 | 320 | 32 | 1 | 1 | 318 | 1 | 320 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1254010 | Msa1294250 | 0.921974 | 1.794976e-88 | -8.615850e-47 |
| Msa0277720 | Msa1254010 | 0.802827 | 4.662886e-49 | -8.615850e-47 |
| Msa1200990 | Msa1254010 | 0.911015 | 9.799388e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254010 | MtrunA17_Chr8g0370851 | 89.375 | 320 | 32 | 1 | 1 | 318 | 1 | 320 | 0.0 | 575 |
| Msa1254010 | MtrunA17_Chr8g0370821 | 78.405 | 301 | 62 | 1 | 21 | 318 | 31 | 331 | 5.50e-174 | 485 |
| Msa1254010 | MtrunA17_Chr8g0370831 | 72.368 | 304 | 66 | 2 | 20 | 318 | 19 | 309 | 3.69e-153 | 431 |
| Msa1254010 | MtrunA17_Chr3g0145981 | 64.918 | 305 | 97 | 2 | 14 | 317 | 36 | 331 | 7.00e-147 | 417 |
| Msa1254010 | MtrunA17_Chr7g0270841 | 54.545 | 242 | 108 | 1 | 78 | 317 | 36 | 277 | 5.72e-95 | 282 |
| Msa1254010 | MtrunA17_Chr2g0329791 | 37.695 | 321 | 148 | 9 | 1 | 311 | 4 | 282 | 2.40e-61 | 197 |
| Msa1254010 | MtrunA17_Chr7g0221751 | 39.841 | 251 | 140 | 4 | 78 | 317 | 60 | 310 | 1.97e-60 | 196 |
| Msa1254010 | MtrunA17_Chr1g0206111 | 39.044 | 251 | 142 | 4 | 78 | 317 | 63 | 313 | 2.14e-58 | 190 |
| Msa1254010 | MtrunA17_Chr2g0294721 | 39.683 | 252 | 140 | 6 | 78 | 317 | 56 | 307 | 1.27e-57 | 188 |
| Msa1254010 | MtrunA17_Chr2g0329781 | 36.066 | 305 | 146 | 10 | 14 | 311 | 1 | 263 | 8.49e-54 | 177 |
| Msa1254010 | MtrunA17_Chr7g0274181 | 58.621 | 58 | 20 | 2 | 6 | 62 | 3 | 57 | 1.69e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254010 | AT3G12500.1 | 69.799 | 298 | 85 | 3 | 23 | 318 | 33 | 327 | 3.66e-146 | 415 |
| Msa1254010 | AT4G01700.1 | 55.144 | 243 | 107 | 1 | 78 | 318 | 38 | 280 | 9.13e-99 | 292 |
| Msa1254010 | AT1G02360.1 | 54.656 | 247 | 110 | 1 | 74 | 318 | 26 | 272 | 7.44e-98 | 290 |
| Msa1254010 | AT1G02360.3 | 54.656 | 247 | 110 | 1 | 74 | 318 | 78 | 324 | 9.36e-98 | 291 |
| Msa1254010 | AT1G02360.2 | 54.656 | 247 | 110 | 1 | 74 | 318 | 72 | 318 | 1.02e-97 | 291 |
| Msa1254010 | AT3G54420.1 | 36.943 | 314 | 149 | 9 | 1 | 311 | 6 | 273 | 9.27e-61 | 195 |
| Msa1254010 | AT1G05850.1 | 34.161 | 322 | 181 | 8 | 8 | 317 | 8 | 310 | 9.43e-57 | 186 |
| Msa1254010 | AT1G05850.2 | 34.161 | 322 | 181 | 8 | 8 | 317 | 8 | 310 | 9.43e-57 | 186 |
| Msa1254010 | AT2G43590.1 | 40.136 | 294 | 120 | 11 | 22 | 311 | 23 | 264 | 9.45e-56 | 182 |
| Msa1254010 | AT3G16920.1 | 36.905 | 252 | 147 | 5 | 78 | 317 | 68 | 319 | 2.37e-54 | 181 |
| Msa1254010 | AT3G16920.2 | 36.905 | 252 | 147 | 5 | 78 | 317 | 92 | 343 | 3.26e-54 | 181 |
| Msa1254010 | AT2G43620.1 | 35.331 | 317 | 145 | 12 | 10 | 311 | 12 | 283 | 1.89e-51 | 171 |
| Msa1254010 | AT2G43610.1 | 37.421 | 318 | 141 | 15 | 6 | 311 | 10 | 281 | 3.70e-51 | 171 |
| Msa1254010 | AT2G43580.1 | 38.078 | 281 | 126 | 9 | 35 | 311 | 29 | 265 | 6.36e-49 | 164 |
| Msa1254010 | AT2G43570.1 | 33.228 | 316 | 141 | 11 | 10 | 311 | 18 | 277 | 7.95e-47 | 159 |
| Msa1254010 | AT1G56680.1 | 31.541 | 279 | 144 | 10 | 40 | 311 | 42 | 280 | 6.66e-34 | 125 |
| Msa1254010 | AT1G56680.2 | 31.541 | 279 | 144 | 10 | 40 | 311 | 65 | 303 | 1.60e-33 | 125 |
| Msa1254010 | AT2G43600.1 | 29.618 | 314 | 164 | 14 | 7 | 311 | 8 | 273 | 3.14e-31 | 118 |
| Msa1254010 | AT2G43600.2 | 29.618 | 314 | 164 | 14 | 7 | 311 | 29 | 294 | 7.69e-31 | 118 |
| Msa1254010 | AT3G47540.1 | 29.388 | 245 | 116 | 10 | 71 | 311 | 23 | 214 | 5.64e-20 | 87.0 |
| Msa1254010 | AT3G47540.2 | 28.692 | 237 | 112 | 10 | 71 | 303 | 23 | 206 | 9.28e-17 | 79.3 |
Find 103 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCAAATCTTCGTTAA+TGG | 0.183482 | 8_2:-51904546 | None:intergenic |
| TCAGGACATCCCTGTGGTTT+TGG | 0.197252 | 8_2:+51904606 | Msa1254010:CDS |
| TGTTTACTAGCTTTCTTTCT+TGG | 0.214764 | 8_2:+51903666 | Msa1254010:CDS |
| CGCGAAATTTGTGCTTTCTT+AGG | 0.298327 | 8_2:+51904020 | Msa1254010:CDS |
| TATCACAGCAACTACAATTA+TGG | 0.304192 | 8_2:+51904509 | Msa1254010:intron |
| AGGTTCTGTTGCAGCCAATT+TGG | 0.316676 | 8_2:+51903741 | Msa1254010:CDS |
| CAAATGCAGTCGTGTCATTC+AGG | 0.337259 | 8_2:+51904588 | Msa1254010:CDS |
| AAGCACAAATTTCGCGCTTA+CGG | 0.342531 | 8_2:-51904013 | None:intergenic |
| TCTACCACATTGCTGAGCTT+TGG | 0.350437 | 8_2:-51903691 | None:intergenic |
| GGAGCACATGGCCAAGTTCC+GGG | 0.357495 | 8_2:-51904326 | None:intergenic |
| GCAGGGAGGGTCCCCGGATA+TGG | 0.360655 | 8_2:+51904707 | Msa1254010:CDS |
| TCAAGCCATGATGTGATTAC+TGG | 0.363234 | 8_2:+51904653 | Msa1254010:CDS |
| AGCACAAATTTCGCGCTTAC+GGG | 0.366237 | 8_2:-51904012 | None:intergenic |
| TGTTGCCACAATAACCAAAT+TGG | 0.376604 | 8_2:-51903755 | None:intergenic |
| GTTGGTGATCACGCCATATC+CGG | 0.377064 | 8_2:-51904720 | None:intergenic |
| GCTTACTGAGTGAGTTGAAT+TGG | 0.389797 | 8_2:-51904374 | None:intergenic |
| ATGGAGCTCTTTGCGCAAAT+AGG | 0.394600 | 8_2:+51903721 | Msa1254010:CDS |
| GAATGACACGACTGCATTTG+AGG | 0.399748 | 8_2:-51904585 | None:intergenic |
| GCTTGAATGTGGGCGCGGTC+AGG | 0.406934 | 8_2:+51904757 | Msa1254010:CDS |
| ACCAAATCCGGGAAAAGAAT+TGG | 0.411058 | 8_2:-51903970 | None:intergenic |
| GTGGGCGCGGTCAGGATCCT+CGG | 0.413992 | 8_2:+51904765 | Msa1254010:CDS |
| CGAAGATTTGATAAACAATC+CGG | 0.416154 | 8_2:+51904553 | Msa1254010:CDS |
| CCACTACCACTAGGTGTTGT+TGG | 0.419830 | 8_2:-51903837 | None:intergenic |
| TAGAAGATATTGTCAACTGT+TGG | 0.422844 | 8_2:+51904811 | Msa1254010:CDS |
| TTGAAGGCTTGTTTCCCTGC+GGG | 0.423039 | 8_2:-51904634 | None:intergenic |
| AGGAGCACATGGCCAAGTTC+CGG | 0.423338 | 8_2:-51904327 | None:intergenic |
| ATCACCGGTAGTACCAAATC+CGG | 0.431755 | 8_2:-51903982 | None:intergenic |
| AGTGGGCACCGGTGCTAACT+TGG | 0.437461 | 8_2:+51904835 | Msa1254010:CDS |
| CTCGGGTCGAAGACCGGATC+GGG | 0.442681 | 8_2:+51904783 | Msa1254010:CDS |
| CCCCATGCGTATGGACCGTC+TGG | 0.444133 | 8_2:-51904257 | None:intergenic |
| GTTGGTGTCGGTGTTGAAGT+AGG | 0.450581 | 8_2:-51903819 | None:intergenic |
| CGAAATGATCCACGTTGTGC+TGG | 0.450696 | 8_2:+51903909 | Msa1254010:CDS |
| ATCTTCTATAAAACCCGATC+CGG | 0.453034 | 8_2:-51904796 | None:intergenic |
| GATCCACGTTGTGCTGGAAA+TGG | 0.453660 | 8_2:+51903915 | Msa1254010:CDS |
| GTAATCACATCATGGCTTGA+AGG | 0.455035 | 8_2:-51904650 | None:intergenic |
| TCGTTAATGGCTCTACCGGC+TGG | 0.457563 | 8_2:-51904533 | None:intergenic |
| ATCTTCGTTAATGGCTCTAC+CGG | 0.460856 | 8_2:-51904537 | None:intergenic |
| AGGTAATTGGCTTAAGCAAA+TGG | 0.465402 | 8_2:-51904875 | None:intergenic |
| TTGGTGATCACGCCATATCC+GGG | 0.466881 | 8_2:-51904719 | None:intergenic |
| AGAAGATATTGTCAACTGTT+GGG | 0.473229 | 8_2:+51904812 | Msa1254010:CDS |
| ACTATTGTACACCCGGAACT+TGG | 0.476555 | 8_2:+51904315 | Msa1254010:CDS |
| CAACTGTTGGGAGTGGGCAC+CGG | 0.492998 | 8_2:+51904824 | Msa1254010:CDS |
| AACTCAGCAGGGAGGGTCCC+CGG | 0.496815 | 8_2:+51904701 | Msa1254010:CDS |
| GGAACTTGGCCATGTGCTCC+TGG | 0.498240 | 8_2:+51904329 | Msa1254010:CDS |
| CAATGTGGTAGACAAGCTAA+TGG | 0.501423 | 8_2:+51903702 | Msa1254010:CDS |
| CACCAGACGGTCCATACGCA+TGG | 0.501810 | 8_2:+51904255 | Msa1254010:CDS |
| AGGATCCTCGGGTCGAAGAC+CGG | 0.507676 | 8_2:+51904777 | Msa1254010:CDS |
| TGCAGCCAATTTGGTTATTG+TGG | 0.508832 | 8_2:+51903750 | Msa1254010:CDS |
| AAGCCCACCGTTGATTATGT+TGG | 0.513005 | 8_2:-51904738 | None:intergenic |
| TGCTGACAACTCAGCAGGGA+GGG | 0.516518 | 8_2:+51904694 | Msa1254010:CDS |
| CGGGTGTACAATAGTCACTC+GGG | 0.517256 | 8_2:-51904307 | None:intergenic |
| GCATTTGAGGACACTAAATC+CGG | 0.517777 | 8_2:-51904572 | None:intergenic |
| CAAACTTCTCATGAAACTAC+AGG | 0.517952 | 8_2:+51904044 | Msa1254010:CDS |
| AAGCAATATCCCCATGCGTA+TGG | 0.526584 | 8_2:-51904266 | None:intergenic |
| TCTGCTGCTGACAACTCAGC+AGG | 0.531521 | 8_2:+51904689 | Msa1254010:CDS |
| GCGGGGTCATCCAAAACCAC+AGG | 0.533372 | 8_2:-51904616 | None:intergenic |
| ACACCTAGTGGTAGTGGTGT+TGG | 0.534720 | 8_2:+51903843 | Msa1254010:CDS |
| TGGGCGCGGTCAGGATCCTC+GGG | 0.536063 | 8_2:+51904766 | Msa1254010:CDS |
| TTTCCCGGATTTGGTACTAC+CGG | 0.536092 | 8_2:+51903978 | Msa1254010:CDS |
| GCTCCTGGTAAAAGATACTT+TGG | 0.536523 | 8_2:+51904344 | Msa1254010:CDS |
| ATCAACGGTGGGCTTGAATG+TGG | 0.542951 | 8_2:+51904746 | Msa1254010:CDS |
| CCTCGGGTCGAAGACCGGAT+CGG | 0.547187 | 8_2:+51904782 | Msa1254010:CDS |
| ACTGCTGACTACTGTGGAGC+TGG | 0.548407 | 8_2:+51903777 | Msa1254010:CDS |
| AGCAGTTATGAAACTATTGT+AGG | 0.548527 | 8_2:-51903946 | None:intergenic |
| CCAACAACACCTAGTGGTAG+TGG | 0.549717 | 8_2:+51903837 | Msa1254010:CDS |
| CCGAGTGACTATTGTACACC+CGG | 0.550082 | 8_2:+51904308 | Msa1254010:CDS |
| AACTACAATTATGGTCCAGC+CGG | 0.554031 | 8_2:+51904518 | Msa1254010:CDS |
| ACTTGGATTGCTACAATCAA+AGG | 0.557758 | 8_2:+51904852 | Msa1254010:CDS |
| ATGATGTGATTACTGGAAGA+TGG | 0.560376 | 8_2:+51904660 | Msa1254010:CDS |
| TGAAGGCTTGTTTCCCTGCG+GGG | 0.560489 | 8_2:-51904633 | None:intergenic |
| GGTGGGCTTGAATGTGGGCG+CGG | 0.574686 | 8_2:+51904752 | Msa1254010:CDS |
| ACCAGACGGTCCATACGCAT+GGG | 0.580369 | 8_2:+51904256 | Msa1254010:CDS |
| ATCTTCCAGTAATCACATCA+TGG | 0.581870 | 8_2:-51904658 | None:intergenic |
| TATGGACCGTCTGGTGCAGT+TGG | 0.583743 | 8_2:-51904248 | None:intergenic |
| CTTGAAGGCTTGTTTCCCTG+CGG | 0.587315 | 8_2:-51904635 | None:intergenic |
| GCTGAGTTGTCAGCAGCAGA+TGG | 0.588520 | 8_2:-51904686 | None:intergenic |
| TCAACGGTGGGCTTGAATGT+GGG | 0.593771 | 8_2:+51904747 | Msa1254010:CDS |
| ATATTGTCAACTGTTGGGAG+TGG | 0.598502 | 8_2:+51904817 | Msa1254010:CDS |
| TATTGTCAACTGTTGGGAGT+GGG | 0.600964 | 8_2:+51904818 | Msa1254010:CDS |
| CCGATCCGGTCTTCGACCCG+AGG | 0.602312 | 8_2:-51904782 | None:intergenic |
| CTTCCAACACCACTACCACT+AGG | 0.602608 | 8_2:-51903846 | None:intergenic |
| GGTAAAAGATACTTTGGCAG+AGG | 0.603766 | 8_2:+51904350 | Msa1254010:CDS |
| TCACCGGTAGTACCAAATCC+GGG | 0.617852 | 8_2:-51903981 | None:intergenic |
| CCACTAGGTGTTGTTGGTGT+CGG | 0.619661 | 8_2:-51903831 | None:intergenic |
| CTGCTGCTGACAACTCAGCA+GGG | 0.634020 | 8_2:+51904690 | Msa1254010:CDS |
| GTAGCAATCCAAGTTAGCAC+CGG | 0.635055 | 8_2:-51904843 | None:intergenic |
| GGGTGGCCAACTGCACCAGA+CGG | 0.640935 | 8_2:+51904242 | Msa1254010:CDS |
| ATCACCAACATAATCAACGG+TGG | 0.648299 | 8_2:+51904734 | Msa1254010:CDS |
| GTGTTGAAGTAGGTGTACAC+TGG | 0.650247 | 8_2:-51903809 | None:intergenic |
| CGGGGTCATCCAAAACCACA+GGG | 0.653098 | 8_2:-51904615 | None:intergenic |
| CTTACGGGTGTTATCATCAC+CGG | 0.656769 | 8_2:-51903997 | None:intergenic |
| GGGTGTACAATAGTCACTCG+GGG | 0.657986 | 8_2:-51904306 | None:intergenic |
| GTGATCACCAACATAATCAA+CGG | 0.660417 | 8_2:+51904731 | Msa1254010:CDS |
| CTGCTGACAACTCAGCAGGG+AGG | 0.664427 | 8_2:+51904693 | Msa1254010:CDS |
| TCACCAACATAATCAACGGT+GGG | 0.667728 | 8_2:+51904735 | Msa1254010:CDS |
| GGCAACACTGCTGACTACTG+TGG | 0.678244 | 8_2:+51903771 | Msa1254010:CDS |
| TGGTGATCACGCCATATCCG+GGG | 0.679659 | 8_2:-51904718 | None:intergenic |
| CCAGACGGTCCATACGCATG+GGG | 0.689775 | 8_2:+51904257 | Msa1254010:CDS |
| GGATCCAAAGCTCAGCAATG+TGG | 0.701619 | 8_2:+51903687 | Msa1254010:CDS |
| CCGACACCAACAACACCTAG+TGG | 0.716597 | 8_2:+51903831 | Msa1254010:CDS |
| TGTCATTCAGGACATCCCTG+TGG | 0.720421 | 8_2:+51904600 | Msa1254010:CDS |
| AATCCATTTCCAGCACAACG+TGG | 0.723881 | 8_2:-51903918 | None:intergenic |
| GGTGTACAATAGTCACTCGG+GGG | 0.760426 | 8_2:-51904305 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTTTTTGTTTAGATAAT+TGG | + | chr8_2:51904081-51904100 | Msa1254010:intron | 15.0% |
| !!! | AATATGTTTGTTTTGAATTT+TGG | + | chr8_2:51904130-51904149 | Msa1254010:intron | 15.0% |
| !! | AATAAATTAAACACTCAAAA+TGG | - | chr8_2:51904432-51904451 | None:intergenic | 15.0% |
| !!! | TAACTTTTTGTTTAGATAAT+TGG | + | chr8_2:51904081-51904100 | Msa1254010:intron | 15.0% |
| !!! | AATATGTTTGTTTTGAATTT+TGG | + | chr8_2:51904130-51904149 | Msa1254010:intron | 15.0% |
| !! | AATAAATTAAACACTCAAAA+TGG | - | chr8_2:51904432-51904451 | None:intergenic | 15.0% |
| ! | GTTTATCAAATCTTCGTTAA+TGG | - | chr8_2:51904549-51904568 | None:intergenic | 25.0% |
| ! | GTTTATCAAATCTTCGTTAA+TGG | - | chr8_2:51904549-51904568 | None:intergenic | 25.0% |
| !! | TGTTTACTAGCTTTCTTTCT+TGG | + | chr8_2:51903666-51903685 | Msa1254010:CDS | 30.0% |
| AGCAGTTATGAAACTATTGT+AGG | - | chr8_2:51903949-51903968 | None:intergenic | 30.0% | |
| !! | TCAAATGTTTTTGAGAACGT+AGG | + | chr8_2:51904218-51904237 | Msa1254010:intron | 30.0% |
| ! | AAATGGTTTGAAATGCTAGA+GGG | - | chr8_2:51904415-51904434 | None:intergenic | 30.0% |
| ! | AAAATGGTTTGAAATGCTAG+AGG | - | chr8_2:51904416-51904435 | None:intergenic | 30.0% |
| ATGAATGCTTAGTGAACTAA+TGG | + | chr8_2:51904473-51904492 | Msa1254010:intron | 30.0% | |
| TGAATGCTTAGTGAACTAAT+GGG | + | chr8_2:51904474-51904493 | Msa1254010:intron | 30.0% | |
| AATTGTAGTTGCTGTGATAA+AGG | - | chr8_2:51904508-51904527 | None:intergenic | 30.0% | |
| TATCACAGCAACTACAATTA+TGG | + | chr8_2:51904509-51904528 | Msa1254010:intron | 30.0% | |
| CGAAGATTTGATAAACAATC+CGG | + | chr8_2:51904553-51904572 | Msa1254010:CDS | 30.0% | |
| TAGAAGATATTGTCAACTGT+TGG | + | chr8_2:51904811-51904830 | Msa1254010:CDS | 30.0% | |
| AGAAGATATTGTCAACTGTT+GGG | + | chr8_2:51904812-51904831 | Msa1254010:CDS | 30.0% | |
| !! | TGTTTACTAGCTTTCTTTCT+TGG | + | chr8_2:51903666-51903685 | Msa1254010:CDS | 30.0% |
| AGCAGTTATGAAACTATTGT+AGG | - | chr8_2:51903949-51903968 | None:intergenic | 30.0% | |
| !! | TCAAATGTTTTTGAGAACGT+AGG | + | chr8_2:51904218-51904237 | Msa1254010:intron | 30.0% |
| ! | AAATGGTTTGAAATGCTAGA+GGG | - | chr8_2:51904415-51904434 | None:intergenic | 30.0% |
| ! | AAAATGGTTTGAAATGCTAG+AGG | - | chr8_2:51904416-51904435 | None:intergenic | 30.0% |
| ATGAATGCTTAGTGAACTAA+TGG | + | chr8_2:51904473-51904492 | Msa1254010:intron | 30.0% | |
| TGAATGCTTAGTGAACTAAT+GGG | + | chr8_2:51904474-51904493 | Msa1254010:intron | 30.0% | |
| AATTGTAGTTGCTGTGATAA+AGG | - | chr8_2:51904508-51904527 | None:intergenic | 30.0% | |
| TATCACAGCAACTACAATTA+TGG | + | chr8_2:51904509-51904528 | Msa1254010:intron | 30.0% | |
| CGAAGATTTGATAAACAATC+CGG | + | chr8_2:51904553-51904572 | Msa1254010:CDS | 30.0% | |
| TAGAAGATATTGTCAACTGT+TGG | + | chr8_2:51904811-51904830 | Msa1254010:CDS | 30.0% | |
| AGAAGATATTGTCAACTGTT+GGG | + | chr8_2:51904812-51904831 | Msa1254010:CDS | 30.0% | |
| TGTTGCCACAATAACCAAAT+TGG | - | chr8_2:51903758-51903777 | None:intergenic | 35.0% | |
| CAAACTTCTCATGAAACTAC+AGG | + | chr8_2:51904044-51904063 | Msa1254010:CDS | 35.0% | |
| GTCACAATCAATAGTGTTTG+AGG | + | chr8_2:51904195-51904214 | Msa1254010:intron | 35.0% | |
| !! | AATGTTTTTGAGAACGTAGG+AGG | + | chr8_2:51904221-51904240 | Msa1254010:intron | 35.0% |
| !! | ATGTTTTTGAGAACGTAGGA+GGG | + | chr8_2:51904222-51904241 | Msa1254010:intron | 35.0% |
| ATCTTCCAGTAATCACATCA+TGG | - | chr8_2:51904661-51904680 | None:intergenic | 35.0% | |
| ATGATGTGATTACTGGAAGA+TGG | + | chr8_2:51904660-51904679 | Msa1254010:CDS | 35.0% | |
| GTGATCACCAACATAATCAA+CGG | + | chr8_2:51904731-51904750 | Msa1254010:CDS | 35.0% | |
| ATCTTCTATAAAACCCGATC+CGG | - | chr8_2:51904799-51904818 | None:intergenic | 35.0% | |
| ACTTGGATTGCTACAATCAA+AGG | + | chr8_2:51904852-51904871 | Msa1254010:CDS | 35.0% | |
| TGTTGCCACAATAACCAAAT+TGG | - | chr8_2:51903758-51903777 | None:intergenic | 35.0% | |
| CAAACTTCTCATGAAACTAC+AGG | + | chr8_2:51904044-51904063 | Msa1254010:CDS | 35.0% | |
| GTCACAATCAATAGTGTTTG+AGG | + | chr8_2:51904195-51904214 | Msa1254010:intron | 35.0% | |
| !! | AATGTTTTTGAGAACGTAGG+AGG | + | chr8_2:51904221-51904240 | Msa1254010:intron | 35.0% |
| !! | ATGTTTTTGAGAACGTAGGA+GGG | + | chr8_2:51904222-51904241 | Msa1254010:intron | 35.0% |
| ATCTTCCAGTAATCACATCA+TGG | - | chr8_2:51904661-51904680 | None:intergenic | 35.0% | |
| ATGATGTGATTACTGGAAGA+TGG | + | chr8_2:51904660-51904679 | Msa1254010:CDS | 35.0% | |
| GTGATCACCAACATAATCAA+CGG | + | chr8_2:51904731-51904750 | Msa1254010:CDS | 35.0% | |
| ATCTTCTATAAAACCCGATC+CGG | - | chr8_2:51904799-51904818 | None:intergenic | 35.0% | |
| ACTTGGATTGCTACAATCAA+AGG | + | chr8_2:51904852-51904871 | Msa1254010:CDS | 35.0% | |
| CAATGTGGTAGACAAGCTAA+TGG | + | chr8_2:51903702-51903721 | Msa1254010:CDS | 40.0% | |
| TGCAGCCAATTTGGTTATTG+TGG | + | chr8_2:51903750-51903769 | Msa1254010:CDS | 40.0% | |
| ACCAAATCCGGGAAAAGAAT+TGG | - | chr8_2:51903973-51903992 | None:intergenic | 40.0% | |
| AAGCACAAATTTCGCGCTTA+CGG | - | chr8_2:51904016-51904035 | None:intergenic | 40.0% | |
| CGCGAAATTTGTGCTTTCTT+AGG | + | chr8_2:51904020-51904039 | Msa1254010:CDS | 40.0% | |
| !! | TATCTTTTACCAGGAGCACA+TGG | - | chr8_2:51904341-51904360 | None:intergenic | 40.0% |
| GCTCCTGGTAAAAGATACTT+TGG | + | chr8_2:51904344-51904363 | Msa1254010:CDS | 40.0% | |
| !! | CTGCCAAAGTATCTTTTACC+AGG | - | chr8_2:51904350-51904369 | None:intergenic | 40.0% |
| GGTAAAAGATACTTTGGCAG+AGG | + | chr8_2:51904350-51904369 | Msa1254010:CDS | 40.0% | |
| ! | GCTTACTGAGTGAGTTGAAT+TGG | - | chr8_2:51904377-51904396 | None:intergenic | 40.0% |
| TTGAAATGCTAGAGGGATGA+AGG | - | chr8_2:51904408-51904427 | None:intergenic | 40.0% | |
| AACTACAATTATGGTCCAGC+CGG | + | chr8_2:51904518-51904537 | Msa1254010:CDS | 40.0% | |
| ! | ATCTTCGTTAATGGCTCTAC+CGG | - | chr8_2:51904540-51904559 | None:intergenic | 40.0% |
| GCATTTGAGGACACTAAATC+CGG | - | chr8_2:51904575-51904594 | None:intergenic | 40.0% | |
| GTAATCACATCATGGCTTGA+AGG | - | chr8_2:51904653-51904672 | None:intergenic | 40.0% | |
| TCAAGCCATGATGTGATTAC+TGG | + | chr8_2:51904653-51904672 | Msa1254010:CDS | 40.0% | |
| ATCACCAACATAATCAACGG+TGG | + | chr8_2:51904734-51904753 | Msa1254010:CDS | 40.0% | |
| TCACCAACATAATCAACGGT+GGG | + | chr8_2:51904735-51904754 | Msa1254010:CDS | 40.0% | |
| ATATTGTCAACTGTTGGGAG+TGG | + | chr8_2:51904817-51904836 | Msa1254010:CDS | 40.0% | |
| TATTGTCAACTGTTGGGAGT+GGG | + | chr8_2:51904818-51904837 | Msa1254010:CDS | 40.0% | |
| CAATGTGGTAGACAAGCTAA+TGG | + | chr8_2:51903702-51903721 | Msa1254010:CDS | 40.0% | |
| TGCAGCCAATTTGGTTATTG+TGG | + | chr8_2:51903750-51903769 | Msa1254010:CDS | 40.0% | |
| ACCAAATCCGGGAAAAGAAT+TGG | - | chr8_2:51903973-51903992 | None:intergenic | 40.0% | |
| AAGCACAAATTTCGCGCTTA+CGG | - | chr8_2:51904016-51904035 | None:intergenic | 40.0% | |
| CGCGAAATTTGTGCTTTCTT+AGG | + | chr8_2:51904020-51904039 | Msa1254010:CDS | 40.0% | |
| !! | TATCTTTTACCAGGAGCACA+TGG | - | chr8_2:51904341-51904360 | None:intergenic | 40.0% |
| GCTCCTGGTAAAAGATACTT+TGG | + | chr8_2:51904344-51904363 | Msa1254010:CDS | 40.0% | |
| !! | CTGCCAAAGTATCTTTTACC+AGG | - | chr8_2:51904350-51904369 | None:intergenic | 40.0% |
| GGTAAAAGATACTTTGGCAG+AGG | + | chr8_2:51904350-51904369 | Msa1254010:CDS | 40.0% | |
| ! | GCTTACTGAGTGAGTTGAAT+TGG | - | chr8_2:51904377-51904396 | None:intergenic | 40.0% |
| TTGAAATGCTAGAGGGATGA+AGG | - | chr8_2:51904408-51904427 | None:intergenic | 40.0% | |
| AACTACAATTATGGTCCAGC+CGG | + | chr8_2:51904518-51904537 | Msa1254010:CDS | 40.0% | |
| ! | ATCTTCGTTAATGGCTCTAC+CGG | - | chr8_2:51904540-51904559 | None:intergenic | 40.0% |
| GCATTTGAGGACACTAAATC+CGG | - | chr8_2:51904575-51904594 | None:intergenic | 40.0% | |
| GTAATCACATCATGGCTTGA+AGG | - | chr8_2:51904653-51904672 | None:intergenic | 40.0% | |
| TCAAGCCATGATGTGATTAC+TGG | + | chr8_2:51904653-51904672 | Msa1254010:CDS | 40.0% | |
| ATCACCAACATAATCAACGG+TGG | + | chr8_2:51904734-51904753 | Msa1254010:CDS | 40.0% | |
| TCACCAACATAATCAACGGT+GGG | + | chr8_2:51904735-51904754 | Msa1254010:CDS | 40.0% | |
| ATATTGTCAACTGTTGGGAG+TGG | + | chr8_2:51904817-51904836 | Msa1254010:CDS | 40.0% | |
| TATTGTCAACTGTTGGGAGT+GGG | + | chr8_2:51904818-51904837 | Msa1254010:CDS | 40.0% | |
| TCTACCACATTGCTGAGCTT+TGG | - | chr8_2:51903694-51903713 | None:intergenic | 45.0% | |
| ATGGAGCTCTTTGCGCAAAT+AGG | + | chr8_2:51903721-51903740 | Msa1254010:CDS | 45.0% | |
| AGGTTCTGTTGCAGCCAATT+TGG | + | chr8_2:51903741-51903760 | Msa1254010:CDS | 45.0% | |
| GTGTTGAAGTAGGTGTACAC+TGG | - | chr8_2:51903812-51903831 | None:intergenic | 45.0% | |
| AATCCATTTCCAGCACAACG+TGG | - | chr8_2:51903921-51903940 | None:intergenic | 45.0% | |
| ! | ACTGCTGCCAATTCTTTTCC+CGG | + | chr8_2:51903963-51903982 | Msa1254010:CDS | 45.0% |
| ! | GCCAATTCTTTTCCCGGATT+TGG | + | chr8_2:51903969-51903988 | Msa1254010:CDS | 45.0% |
| ! | TTTCCCGGATTTGGTACTAC+CGG | + | chr8_2:51903978-51903997 | Msa1254010:CDS | 45.0% |
| ATCACCGGTAGTACCAAATC+CGG | - | chr8_2:51903985-51904004 | None:intergenic | 45.0% | |
| ! | CTTACGGGTGTTATCATCAC+CGG | - | chr8_2:51904000-51904019 | None:intergenic | 45.0% |
| AGCACAAATTTCGCGCTTAC+GGG | - | chr8_2:51904015-51904034 | None:intergenic | 45.0% | |
| !! | TTTTTGAGAACGTAGGAGGG+TGG | + | chr8_2:51904225-51904244 | Msa1254010:intron | 45.0% |
| AAGCAATATCCCCATGCGTA+TGG | - | chr8_2:51904269-51904288 | None:intergenic | 45.0% | |
| ACTATTGTACACCCGGAACT+TGG | + | chr8_2:51904315-51904334 | Msa1254010:CDS | 45.0% | |
| GAATGACACGACTGCATTTG+AGG | - | chr8_2:51904588-51904607 | None:intergenic | 45.0% | |
| ! | CAAATGCAGTCGTGTCATTC+AGG | + | chr8_2:51904588-51904607 | Msa1254010:CDS | 45.0% |
| ! | AAGCCCACCGTTGATTATGT+TGG | - | chr8_2:51904741-51904760 | None:intergenic | 45.0% |
| GTAGCAATCCAAGTTAGCAC+CGG | - | chr8_2:51904846-51904865 | None:intergenic | 45.0% | |
| TCTACCACATTGCTGAGCTT+TGG | - | chr8_2:51903694-51903713 | None:intergenic | 45.0% | |
| ATGGAGCTCTTTGCGCAAAT+AGG | + | chr8_2:51903721-51903740 | Msa1254010:CDS | 45.0% | |
| AGGTTCTGTTGCAGCCAATT+TGG | + | chr8_2:51903741-51903760 | Msa1254010:CDS | 45.0% | |
| GTGTTGAAGTAGGTGTACAC+TGG | - | chr8_2:51903812-51903831 | None:intergenic | 45.0% | |
| AATCCATTTCCAGCACAACG+TGG | - | chr8_2:51903921-51903940 | None:intergenic | 45.0% | |
| ! | ACTGCTGCCAATTCTTTTCC+CGG | + | chr8_2:51903963-51903982 | Msa1254010:CDS | 45.0% |
| ! | GCCAATTCTTTTCCCGGATT+TGG | + | chr8_2:51903969-51903988 | Msa1254010:CDS | 45.0% |
| ! | TTTCCCGGATTTGGTACTAC+CGG | + | chr8_2:51903978-51903997 | Msa1254010:CDS | 45.0% |
| ATCACCGGTAGTACCAAATC+CGG | - | chr8_2:51903985-51904004 | None:intergenic | 45.0% | |
| ! | CTTACGGGTGTTATCATCAC+CGG | - | chr8_2:51904000-51904019 | None:intergenic | 45.0% |
| AGCACAAATTTCGCGCTTAC+GGG | - | chr8_2:51904015-51904034 | None:intergenic | 45.0% | |
| !! | TTTTTGAGAACGTAGGAGGG+TGG | + | chr8_2:51904225-51904244 | Msa1254010:intron | 45.0% |
| AAGCAATATCCCCATGCGTA+TGG | - | chr8_2:51904269-51904288 | None:intergenic | 45.0% | |
| ACTATTGTACACCCGGAACT+TGG | + | chr8_2:51904315-51904334 | Msa1254010:CDS | 45.0% | |
| GAATGACACGACTGCATTTG+AGG | - | chr8_2:51904588-51904607 | None:intergenic | 45.0% | |
| ! | CAAATGCAGTCGTGTCATTC+AGG | + | chr8_2:51904588-51904607 | Msa1254010:CDS | 45.0% |
| ! | AAGCCCACCGTTGATTATGT+TGG | - | chr8_2:51904741-51904760 | None:intergenic | 45.0% |
| GTAGCAATCCAAGTTAGCAC+CGG | - | chr8_2:51904846-51904865 | None:intergenic | 45.0% | |
| GGATCCAAAGCTCAGCAATG+TGG | + | chr8_2:51903687-51903706 | Msa1254010:CDS | 50.0% | |
| !! | GTTGGTGTCGGTGTTGAAGT+AGG | - | chr8_2:51903822-51903841 | None:intergenic | 50.0% |
| !! | CCACTAGGTGTTGTTGGTGT+CGG | - | chr8_2:51903834-51903853 | None:intergenic | 50.0% |
| ! | CCACTACCACTAGGTGTTGT+TGG | - | chr8_2:51903840-51903859 | None:intergenic | 50.0% |
| CCAACAACACCTAGTGGTAG+TGG | + | chr8_2:51903837-51903856 | Msa1254010:CDS | 50.0% | |
| !! | ACACCTAGTGGTAGTGGTGT+TGG | + | chr8_2:51903843-51903862 | Msa1254010:CDS | 50.0% |
| CTTCCAACACCACTACCACT+AGG | - | chr8_2:51903849-51903868 | None:intergenic | 50.0% | |
| CGAAATGATCCACGTTGTGC+TGG | + | chr8_2:51903909-51903928 | Msa1254010:CDS | 50.0% | |
| GATCCACGTTGTGCTGGAAA+TGG | + | chr8_2:51903915-51903934 | Msa1254010:CDS | 50.0% | |
| TCACCGGTAGTACCAAATCC+GGG | - | chr8_2:51903984-51904003 | None:intergenic | 50.0% | |
| GGTGTACAATAGTCACTCGG+GGG | - | chr8_2:51904308-51904327 | None:intergenic | 50.0% | |
| GGGTGTACAATAGTCACTCG+GGG | - | chr8_2:51904309-51904328 | None:intergenic | 50.0% | |
| CGGGTGTACAATAGTCACTC+GGG | - | chr8_2:51904310-51904329 | None:intergenic | 50.0% | |
| CCGGGTGTACAATAGTCACT+CGG | - | chr8_2:51904311-51904330 | None:intergenic | 50.0% | |
| CCGAGTGACTATTGTACACC+CGG | + | chr8_2:51904308-51904327 | Msa1254010:CDS | 50.0% | |
| TGTCATTCAGGACATCCCTG+TGG | + | chr8_2:51904600-51904619 | Msa1254010:CDS | 50.0% | |
| ! | TCAGGACATCCCTGTGGTTT+TGG | + | chr8_2:51904606-51904625 | Msa1254010:CDS | 50.0% |
| ! | TTGAAGGCTTGTTTCCCTGC+GGG | - | chr8_2:51904637-51904656 | None:intergenic | 50.0% |
| ! | CTTGAAGGCTTGTTTCCCTG+CGG | - | chr8_2:51904638-51904657 | None:intergenic | 50.0% |
| ! | TTGGTGATCACGCCATATCC+GGG | - | chr8_2:51904722-51904741 | None:intergenic | 50.0% |
| !! | GTTGGTGATCACGCCATATC+CGG | - | chr8_2:51904723-51904742 | None:intergenic | 50.0% |
| ! | ATCAACGGTGGGCTTGAATG+TGG | + | chr8_2:51904746-51904765 | Msa1254010:CDS | 50.0% |
| ! | TCAACGGTGGGCTTGAATGT+GGG | + | chr8_2:51904747-51904766 | Msa1254010:CDS | 50.0% |
| GGATCCAAAGCTCAGCAATG+TGG | + | chr8_2:51903687-51903706 | Msa1254010:CDS | 50.0% | |
| !! | GTTGGTGTCGGTGTTGAAGT+AGG | - | chr8_2:51903822-51903841 | None:intergenic | 50.0% |
| !! | CCACTAGGTGTTGTTGGTGT+CGG | - | chr8_2:51903834-51903853 | None:intergenic | 50.0% |
| ! | CCACTACCACTAGGTGTTGT+TGG | - | chr8_2:51903840-51903859 | None:intergenic | 50.0% |
| CCAACAACACCTAGTGGTAG+TGG | + | chr8_2:51903837-51903856 | Msa1254010:CDS | 50.0% | |
| !! | ACACCTAGTGGTAGTGGTGT+TGG | + | chr8_2:51903843-51903862 | Msa1254010:CDS | 50.0% |
| CTTCCAACACCACTACCACT+AGG | - | chr8_2:51903849-51903868 | None:intergenic | 50.0% | |
| CGAAATGATCCACGTTGTGC+TGG | + | chr8_2:51903909-51903928 | Msa1254010:CDS | 50.0% | |
| GATCCACGTTGTGCTGGAAA+TGG | + | chr8_2:51903915-51903934 | Msa1254010:CDS | 50.0% | |
| TCACCGGTAGTACCAAATCC+GGG | - | chr8_2:51903984-51904003 | None:intergenic | 50.0% | |
| GGTGTACAATAGTCACTCGG+GGG | - | chr8_2:51904308-51904327 | None:intergenic | 50.0% | |
| GGGTGTACAATAGTCACTCG+GGG | - | chr8_2:51904309-51904328 | None:intergenic | 50.0% | |
| CGGGTGTACAATAGTCACTC+GGG | - | chr8_2:51904310-51904329 | None:intergenic | 50.0% | |
| CCGGGTGTACAATAGTCACT+CGG | - | chr8_2:51904311-51904330 | None:intergenic | 50.0% | |
| CCGAGTGACTATTGTACACC+CGG | + | chr8_2:51904308-51904327 | Msa1254010:CDS | 50.0% | |
| TGTCATTCAGGACATCCCTG+TGG | + | chr8_2:51904600-51904619 | Msa1254010:CDS | 50.0% | |
| ! | TCAGGACATCCCTGTGGTTT+TGG | + | chr8_2:51904606-51904625 | Msa1254010:CDS | 50.0% |
| ! | TTGAAGGCTTGTTTCCCTGC+GGG | - | chr8_2:51904637-51904656 | None:intergenic | 50.0% |
| ! | CTTGAAGGCTTGTTTCCCTG+CGG | - | chr8_2:51904638-51904657 | None:intergenic | 50.0% |
| ! | TTGGTGATCACGCCATATCC+GGG | - | chr8_2:51904722-51904741 | None:intergenic | 50.0% |
| !! | GTTGGTGATCACGCCATATC+CGG | - | chr8_2:51904723-51904742 | None:intergenic | 50.0% |
| ! | ATCAACGGTGGGCTTGAATG+TGG | + | chr8_2:51904746-51904765 | Msa1254010:CDS | 50.0% |
| ! | TCAACGGTGGGCTTGAATGT+GGG | + | chr8_2:51904747-51904766 | Msa1254010:CDS | 50.0% |
| ! | GGCAACACTGCTGACTACTG+TGG | + | chr8_2:51903771-51903790 | Msa1254010:CDS | 55.0% |
| ! | ACTGCTGACTACTGTGGAGC+TGG | + | chr8_2:51903777-51903796 | Msa1254010:CDS | 55.0% |
| CCGACACCAACAACACCTAG+TGG | + | chr8_2:51903831-51903850 | Msa1254010:CDS | 55.0% | |
| TATGGACCGTCTGGTGCAGT+TGG | - | chr8_2:51904251-51904270 | None:intergenic | 55.0% | |
| ACCAGACGGTCCATACGCAT+GGG | + | chr8_2:51904256-51904275 | Msa1254010:CDS | 55.0% | |
| ! | AGGAGCACATGGCCAAGTTC+CGG | - | chr8_2:51904330-51904349 | None:intergenic | 55.0% |
| ! | TCGTTAATGGCTCTACCGGC+TGG | - | chr8_2:51904536-51904555 | None:intergenic | 55.0% |
| CGGGGTCATCCAAAACCACA+GGG | - | chr8_2:51904618-51904637 | None:intergenic | 55.0% | |
| !!! | TGGTTTTGGATGACCCCGCA+GGG | + | chr8_2:51904620-51904639 | Msa1254010:CDS | 55.0% |
| ! | TGAAGGCTTGTTTCCCTGCG+GGG | - | chr8_2:51904636-51904655 | None:intergenic | 55.0% |
| GCTGAGTTGTCAGCAGCAGA+TGG | - | chr8_2:51904689-51904708 | None:intergenic | 55.0% | |
| TCTGCTGCTGACAACTCAGC+AGG | + | chr8_2:51904689-51904708 | Msa1254010:CDS | 55.0% | |
| CTGCTGCTGACAACTCAGCA+GGG | + | chr8_2:51904690-51904709 | Msa1254010:CDS | 55.0% | |
| TGCTGACAACTCAGCAGGGA+GGG | + | chr8_2:51904694-51904713 | Msa1254010:CDS | 55.0% | |
| TGGTGATCACGCCATATCCG+GGG | - | chr8_2:51904721-51904740 | None:intergenic | 55.0% | |
| ! | GGCAACACTGCTGACTACTG+TGG | + | chr8_2:51903771-51903790 | Msa1254010:CDS | 55.0% |
| ! | ACTGCTGACTACTGTGGAGC+TGG | + | chr8_2:51903777-51903796 | Msa1254010:CDS | 55.0% |
| CCGACACCAACAACACCTAG+TGG | + | chr8_2:51903831-51903850 | Msa1254010:CDS | 55.0% | |
| TATGGACCGTCTGGTGCAGT+TGG | - | chr8_2:51904251-51904270 | None:intergenic | 55.0% | |
| ACCAGACGGTCCATACGCAT+GGG | + | chr8_2:51904256-51904275 | Msa1254010:CDS | 55.0% | |
| ! | AGGAGCACATGGCCAAGTTC+CGG | - | chr8_2:51904330-51904349 | None:intergenic | 55.0% |
| ! | TCGTTAATGGCTCTACCGGC+TGG | - | chr8_2:51904536-51904555 | None:intergenic | 55.0% |
| CGGGGTCATCCAAAACCACA+GGG | - | chr8_2:51904618-51904637 | None:intergenic | 55.0% | |
| !!! | TGGTTTTGGATGACCCCGCA+GGG | + | chr8_2:51904620-51904639 | Msa1254010:CDS | 55.0% |
| ! | TGAAGGCTTGTTTCCCTGCG+GGG | - | chr8_2:51904636-51904655 | None:intergenic | 55.0% |
| GCTGAGTTGTCAGCAGCAGA+TGG | - | chr8_2:51904689-51904708 | None:intergenic | 55.0% | |
| TCTGCTGCTGACAACTCAGC+AGG | + | chr8_2:51904689-51904708 | Msa1254010:CDS | 55.0% | |
| CTGCTGCTGACAACTCAGCA+GGG | + | chr8_2:51904690-51904709 | Msa1254010:CDS | 55.0% | |
| TGCTGACAACTCAGCAGGGA+GGG | + | chr8_2:51904694-51904713 | Msa1254010:CDS | 55.0% | |
| TGGTGATCACGCCATATCCG+GGG | - | chr8_2:51904721-51904740 | None:intergenic | 55.0% | |
| CACCAGACGGTCCATACGCA+TGG | + | chr8_2:51904255-51904274 | Msa1254010:CDS | 60.0% | |
| CCAGACGGTCCATACGCATG+GGG | + | chr8_2:51904257-51904276 | Msa1254010:CDS | 60.0% | |
| GGAGCACATGGCCAAGTTCC+GGG | - | chr8_2:51904329-51904348 | None:intergenic | 60.0% | |
| GGAACTTGGCCATGTGCTCC+TGG | + | chr8_2:51904329-51904348 | Msa1254010:CDS | 60.0% | |
| GCGGGGTCATCCAAAACCAC+AGG | - | chr8_2:51904619-51904638 | None:intergenic | 60.0% | |
| !!! | GTGGTTTTGGATGACCCCGC+AGG | + | chr8_2:51904619-51904638 | Msa1254010:CDS | 60.0% |
| CTGCTGACAACTCAGCAGGG+AGG | + | chr8_2:51904693-51904712 | Msa1254010:CDS | 60.0% | |
| AGGATCCTCGGGTCGAAGAC+CGG | + | chr8_2:51904777-51904796 | Msa1254010:CDS | 60.0% | |
| CAACTGTTGGGAGTGGGCAC+CGG | + | chr8_2:51904824-51904843 | Msa1254010:CDS | 60.0% | |
| !! | AGTGGGCACCGGTGCTAACT+TGG | + | chr8_2:51904835-51904854 | Msa1254010:CDS | 60.0% |
| CACCAGACGGTCCATACGCA+TGG | + | chr8_2:51904255-51904274 | Msa1254010:CDS | 60.0% | |
| CCAGACGGTCCATACGCATG+GGG | + | chr8_2:51904257-51904276 | Msa1254010:CDS | 60.0% | |
| GGAGCACATGGCCAAGTTCC+GGG | - | chr8_2:51904329-51904348 | None:intergenic | 60.0% | |
| GGAACTTGGCCATGTGCTCC+TGG | + | chr8_2:51904329-51904348 | Msa1254010:CDS | 60.0% | |
| GCGGGGTCATCCAAAACCAC+AGG | - | chr8_2:51904619-51904638 | None:intergenic | 60.0% | |
| !!! | GTGGTTTTGGATGACCCCGC+AGG | + | chr8_2:51904619-51904638 | Msa1254010:CDS | 60.0% |
| CTGCTGACAACTCAGCAGGG+AGG | + | chr8_2:51904693-51904712 | Msa1254010:CDS | 60.0% | |
| AGGATCCTCGGGTCGAAGAC+CGG | + | chr8_2:51904777-51904796 | Msa1254010:CDS | 60.0% | |
| CAACTGTTGGGAGTGGGCAC+CGG | + | chr8_2:51904824-51904843 | Msa1254010:CDS | 60.0% | |
| !! | AGTGGGCACCGGTGCTAACT+TGG | + | chr8_2:51904835-51904854 | Msa1254010:CDS | 60.0% |
| GGGTGGCCAACTGCACCAGA+CGG | + | chr8_2:51904242-51904261 | Msa1254010:CDS | 65.0% | |
| CCCCATGCGTATGGACCGTC+TGG | - | chr8_2:51904260-51904279 | None:intergenic | 65.0% | |
| AACTCAGCAGGGAGGGTCCC+CGG | + | chr8_2:51904701-51904720 | Msa1254010:CDS | 65.0% | |
| ! | GGTGGGCTTGAATGTGGGCG+CGG | + | chr8_2:51904752-51904771 | Msa1254010:CDS | 65.0% |
| GCTTGAATGTGGGCGCGGTC+AGG | + | chr8_2:51904757-51904776 | Msa1254010:CDS | 65.0% | |
| CCTCGGGTCGAAGACCGGAT+CGG | + | chr8_2:51904782-51904801 | Msa1254010:CDS | 65.0% | |
| CTCGGGTCGAAGACCGGATC+GGG | + | chr8_2:51904783-51904802 | Msa1254010:CDS | 65.0% | |
| GGGTGGCCAACTGCACCAGA+CGG | + | chr8_2:51904242-51904261 | Msa1254010:CDS | 65.0% | |
| CCCCATGCGTATGGACCGTC+TGG | - | chr8_2:51904260-51904279 | None:intergenic | 65.0% | |
| AACTCAGCAGGGAGGGTCCC+CGG | + | chr8_2:51904701-51904720 | Msa1254010:CDS | 65.0% | |
| ! | GGTGGGCTTGAATGTGGGCG+CGG | + | chr8_2:51904752-51904771 | Msa1254010:CDS | 65.0% |
| GCTTGAATGTGGGCGCGGTC+AGG | + | chr8_2:51904757-51904776 | Msa1254010:CDS | 65.0% | |
| CCTCGGGTCGAAGACCGGAT+CGG | + | chr8_2:51904782-51904801 | Msa1254010:CDS | 65.0% | |
| CTCGGGTCGAAGACCGGATC+GGG | + | chr8_2:51904783-51904802 | Msa1254010:CDS | 65.0% | |
| GCAGGGAGGGTCCCCGGATA+TGG | + | chr8_2:51904707-51904726 | Msa1254010:CDS | 70.0% | |
| GTGGGCGCGGTCAGGATCCT+CGG | + | chr8_2:51904765-51904784 | Msa1254010:CDS | 70.0% | |
| TGGGCGCGGTCAGGATCCTC+GGG | + | chr8_2:51904766-51904785 | Msa1254010:CDS | 70.0% | |
| CCGATCCGGTCTTCGACCCG+AGG | - | chr8_2:51904785-51904804 | None:intergenic | 70.0% | |
| GCAGGGAGGGTCCCCGGATA+TGG | + | chr8_2:51904707-51904726 | Msa1254010:CDS | 70.0% | |
| GTGGGCGCGGTCAGGATCCT+CGG | + | chr8_2:51904765-51904784 | Msa1254010:CDS | 70.0% | |
| TGGGCGCGGTCAGGATCCTC+GGG | + | chr8_2:51904766-51904785 | Msa1254010:CDS | 70.0% | |
| CCGATCCGGTCTTCGACCCG+AGG | - | chr8_2:51904785-51904804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 51903630 | 51904886 | 51903630 | ID=Msa1254010;Name=Msa1254010 |
| chr8_2 | mRNA | 51903630 | 51904886 | 51903630 | ID=Msa1254010-mRNA-1;Parent=Msa1254010;Name=Msa1254010-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0|1|1|1|3|0|318 |
| chr8_2 | exon | 51903630 | 51904065 | 51903630 | ID=Msa1254010-mRNA-1:exon:15914;Parent=Msa1254010-mRNA-1 |
| chr8_2 | exon | 51904240 | 51904390 | 51904240 | ID=Msa1254010-mRNA-1:exon:15915;Parent=Msa1254010-mRNA-1 |
| chr8_2 | exon | 51904517 | 51904886 | 51904517 | ID=Msa1254010-mRNA-1:exon:15916;Parent=Msa1254010-mRNA-1 |
| chr8_2 | CDS | 51903630 | 51904065 | 51903630 | ID=Msa1254010-mRNA-1:cds;Parent=Msa1254010-mRNA-1 |
| chr8_2 | CDS | 51904240 | 51904390 | 51904240 | ID=Msa1254010-mRNA-1:cds;Parent=Msa1254010-mRNA-1 |
| chr8_2 | CDS | 51904517 | 51904886 | 51904517 | ID=Msa1254010-mRNA-1:cds;Parent=Msa1254010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
