Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294250 | XP_003629192.1 | 88.750 | 320 | 34 | 1 | 1 | 318 | 1 | 320 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294250 | sp|P36907|CHIX_PEA | 74.062 | 320 | 81 | 1 | 1 | 318 | 1 | 320 | 2.76e-174 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294250 | G7LA77 | 88.750 | 320 | 34 | 1 | 1 | 318 | 1 | 320 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1254010 | Msa1294250 | 0.921974 | 1.794976e-88 | -8.615850e-47 |
| Msa1200990 | Msa1294250 | 0.959780 | 8.057149e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294250 | MtrunA17_Chr8g0370851 | 88.750 | 320 | 34 | 1 | 1 | 318 | 1 | 320 | 0.0 | 571 |
| Msa1294250 | MtrunA17_Chr8g0370821 | 78.405 | 301 | 62 | 1 | 21 | 318 | 31 | 331 | 3.87e-174 | 485 |
| Msa1294250 | MtrunA17_Chr8g0370831 | 72.368 | 304 | 66 | 2 | 20 | 318 | 19 | 309 | 3.42e-153 | 431 |
| Msa1294250 | MtrunA17_Chr3g0145981 | 63.522 | 318 | 106 | 2 | 1 | 317 | 23 | 331 | 2.15e-147 | 418 |
| Msa1294250 | MtrunA17_Chr7g0270841 | 54.545 | 242 | 108 | 1 | 78 | 317 | 36 | 277 | 1.69e-95 | 284 |
| Msa1294250 | MtrunA17_Chr2g0329791 | 37.695 | 321 | 148 | 9 | 1 | 311 | 4 | 282 | 2.92e-61 | 196 |
| Msa1294250 | MtrunA17_Chr7g0221751 | 40.239 | 251 | 139 | 4 | 78 | 317 | 60 | 310 | 4.47e-61 | 197 |
| Msa1294250 | MtrunA17_Chr1g0206111 | 39.044 | 251 | 142 | 4 | 78 | 317 | 63 | 313 | 2.33e-58 | 190 |
| Msa1294250 | MtrunA17_Chr2g0294721 | 39.683 | 252 | 140 | 6 | 78 | 317 | 56 | 307 | 1.25e-57 | 188 |
| Msa1294250 | MtrunA17_Chr2g0329781 | 37.000 | 300 | 140 | 10 | 19 | 311 | 6 | 263 | 5.47e-54 | 177 |
| Msa1294250 | MtrunA17_Chr7g0274181 | 56.140 | 57 | 23 | 1 | 6 | 62 | 3 | 57 | 5.33e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294250 | AT3G12500.1 | 69.799 | 298 | 85 | 3 | 23 | 318 | 33 | 327 | 5.19e-146 | 414 |
| Msa1294250 | AT4G01700.1 | 55.144 | 243 | 107 | 1 | 78 | 318 | 38 | 280 | 4.12e-99 | 293 |
| Msa1294250 | AT1G02360.1 | 54.656 | 247 | 110 | 1 | 74 | 318 | 26 | 272 | 3.83e-98 | 291 |
| Msa1294250 | AT1G02360.2 | 54.656 | 247 | 110 | 1 | 74 | 318 | 72 | 318 | 4.52e-98 | 292 |
| Msa1294250 | AT1G02360.3 | 54.656 | 247 | 110 | 1 | 74 | 318 | 78 | 324 | 4.72e-98 | 292 |
| Msa1294250 | AT3G54420.1 | 36.624 | 314 | 150 | 9 | 1 | 311 | 6 | 273 | 3.85e-60 | 194 |
| Msa1294250 | AT1G05850.1 | 38.843 | 242 | 137 | 5 | 87 | 317 | 69 | 310 | 2.32e-56 | 185 |
| Msa1294250 | AT1G05850.2 | 38.843 | 242 | 137 | 5 | 87 | 317 | 69 | 310 | 2.32e-56 | 185 |
| Msa1294250 | AT2G43590.1 | 39.456 | 294 | 122 | 11 | 22 | 311 | 23 | 264 | 8.95e-55 | 179 |
| Msa1294250 | AT3G16920.1 | 36.508 | 252 | 148 | 5 | 78 | 317 | 68 | 319 | 2.75e-54 | 180 |
| Msa1294250 | AT3G16920.2 | 36.508 | 252 | 148 | 5 | 78 | 317 | 92 | 343 | 3.19e-54 | 181 |
| Msa1294250 | AT2G43610.1 | 37.736 | 318 | 140 | 15 | 6 | 311 | 10 | 281 | 9.90e-52 | 172 |
| Msa1294250 | AT2G43620.1 | 35.331 | 317 | 145 | 12 | 10 | 311 | 12 | 283 | 1.57e-51 | 172 |
| Msa1294250 | AT2G43580.1 | 38.078 | 281 | 126 | 9 | 35 | 311 | 29 | 265 | 1.92e-49 | 166 |
| Msa1294250 | AT2G43570.1 | 33.651 | 315 | 141 | 11 | 10 | 311 | 18 | 277 | 1.71e-47 | 161 |
| Msa1294250 | AT1G56680.1 | 31.541 | 279 | 144 | 10 | 40 | 311 | 42 | 280 | 6.46e-34 | 125 |
| Msa1294250 | AT1G56680.2 | 31.541 | 279 | 144 | 10 | 40 | 311 | 65 | 303 | 1.63e-33 | 125 |
| Msa1294250 | AT2G43600.1 | 29.893 | 281 | 145 | 12 | 40 | 311 | 36 | 273 | 3.20e-31 | 118 |
| Msa1294250 | AT2G43600.2 | 29.893 | 281 | 145 | 12 | 40 | 311 | 57 | 294 | 7.23e-31 | 118 |
| Msa1294250 | AT3G47540.1 | 29.388 | 245 | 116 | 10 | 71 | 311 | 23 | 214 | 3.50e-20 | 87.4 |
| Msa1294250 | AT3G47540.2 | 28.692 | 237 | 112 | 10 | 71 | 303 | 23 | 206 | 4.68e-17 | 80.1 |
Find 102 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCAAATCTTCGTTAA+TGG | 0.183482 | 8_3:-51997096 | None:intergenic |
| TGTTTACTACCTTTCTTTCT+TGG | 0.224675 | 8_3:+51996177 | Msa1294250:CDS |
| TCAGGACATCCCTATGGTTT+TGG | 0.255789 | 8_3:+51997156 | Msa1294250:CDS |
| CGCGAAATTTGTGCTTTCTT+AGG | 0.298327 | 8_3:+51996531 | Msa1294250:CDS |
| TATCACAGCAACTACAATTA+TGG | 0.304192 | 8_3:+51997059 | Msa1294250:intron |
| AGGTTCTGTTGCAGCCAATT+TGG | 0.316676 | 8_3:+51996252 | Msa1294250:CDS |
| CAAATGCAGTCGTGTCATTC+AGG | 0.337259 | 8_3:+51997138 | Msa1294250:CDS |
| AAGCACAAATTTCGCGCTTA+CGG | 0.342531 | 8_3:-51996524 | None:intergenic |
| GGAGCACATGGCCAAGTTCC+GGG | 0.357495 | 8_3:-51996839 | None:intergenic |
| GCAGGGAGGGTCCCCGGATA+TGG | 0.360655 | 8_3:+51997257 | Msa1294250:CDS |
| AGCACAAATTTCGCGCTTAC+GGG | 0.366237 | 8_3:-51996523 | None:intergenic |
| TCAAGCCATGATGTGATTAC+TGG | 0.373764 | 8_3:+51997203 | Msa1294250:CDS |
| TGTTGCCACAATAACCAAAT+TGG | 0.376604 | 8_3:-51996266 | None:intergenic |
| GTTGGTGATCACGCCATATC+CGG | 0.377064 | 8_3:-51997270 | None:intergenic |
| GCTTACTGAGTGAGTTGAAT+TGG | 0.389797 | 8_3:-51996887 | None:intergenic |
| ATGGAGCTCTTTGCGCAAAT+AGG | 0.394600 | 8_3:+51996232 | Msa1294250:CDS |
| GAATGACACGACTGCATTTG+AGG | 0.399748 | 8_3:-51997135 | None:intergenic |
| GTAATCACATCATGGCTTGA+TGG | 0.406185 | 8_3:-51997200 | None:intergenic |
| GCTTGAATGTGGGCGCGGTC+AGG | 0.406934 | 8_3:+51997307 | Msa1294250:CDS |
| ACCAAATCCGGGAAAAGAAT+TGG | 0.411058 | 8_3:-51996481 | None:intergenic |
| GTGGGCGCGGTCAGGATCCT+CGG | 0.413992 | 8_3:+51997315 | Msa1294250:CDS |
| CGAAGATTTGATAAACAATC+CGG | 0.416154 | 8_3:+51997103 | Msa1294250:CDS |
| CCACTACCACTAGGTGTTGT+TGG | 0.419830 | 8_3:-51996348 | None:intergenic |
| TAGAAGATATTGTCAACTGT+TGG | 0.422844 | 8_3:+51997361 | Msa1294250:CDS |
| AGGAGCACATGGCCAAGTTC+CGG | 0.423338 | 8_3:-51996840 | None:intergenic |
| CTCGGGTTGAAGACCGGATC+GGG | 0.424799 | 8_3:+51997333 | Msa1294250:CDS |
| ATCACCGGTAGTACCAAATC+CGG | 0.431755 | 8_3:-51996493 | None:intergenic |
| AGTGGGCACCGGTGCTAACT+TGG | 0.437461 | 8_3:+51997385 | Msa1294250:CDS |
| GTTGGTGTCGGTGTTGAAGT+AGG | 0.450581 | 8_3:-51996330 | None:intergenic |
| CGAAATGATCCACGTTGTGC+TGG | 0.450696 | 8_3:+51996420 | Msa1294250:CDS |
| ATCTTCTATAAAACCCGATC+CGG | 0.453034 | 8_3:-51997346 | None:intergenic |
| GATCCACGTTGTGCTGGAAA+TGG | 0.453660 | 8_3:+51996426 | Msa1294250:CDS |
| TCGTTAATGGCTCTACCGGC+TGG | 0.457563 | 8_3:-51997083 | None:intergenic |
| ATCTTCGTTAATGGCTCTAC+CGG | 0.460856 | 8_3:-51997087 | None:intergenic |
| AGGTAATTGGCTTAAGCAAA+TGG | 0.465402 | 8_3:-51997425 | None:intergenic |
| TTGATGGCTTGTTTCCCTGC+GGG | 0.466168 | 8_3:-51997184 | None:intergenic |
| TTGGTGATCACGCCATATCC+GGG | 0.466881 | 8_3:-51997269 | None:intergenic |
| TCTACCACATTGCTGAGCTT+CGG | 0.468495 | 8_3:-51996202 | None:intergenic |
| AGAAGATATTGTCAACTGTT+GGG | 0.473229 | 8_3:+51997362 | Msa1294250:CDS |
| ACTATTGTACACCCGGAACT+TGG | 0.476555 | 8_3:+51996828 | Msa1294250:CDS |
| CAACTGTTGGGAGTGGGCAC+CGG | 0.492998 | 8_3:+51997374 | Msa1294250:CDS |
| AAGCAATATCCCCACGCGTA+TGG | 0.495207 | 8_3:-51996779 | None:intergenic |
| AACTCAGCAGGGAGGGTCCC+CGG | 0.496815 | 8_3:+51997251 | Msa1294250:CDS |
| GGAACTTGGCCATGTGCTCC+TGG | 0.498240 | 8_3:+51996842 | Msa1294250:CDS |
| CAATGTGGTAGACAAGCTAA+TGG | 0.501423 | 8_3:+51996213 | Msa1294250:CDS |
| TGCAGCCAATTTGGTTATTG+TGG | 0.508832 | 8_3:+51996261 | Msa1294250:CDS |
| AAGCCCACCGTTGATTATGT+TGG | 0.513005 | 8_3:-51997288 | None:intergenic |
| CCCCACGCGTATGGACCGTC+TGG | 0.516224 | 8_3:-51996770 | None:intergenic |
| TGCTGACAACTCAGCAGGGA+GGG | 0.516518 | 8_3:+51997244 | Msa1294250:CDS |
| GCGGGGTCATCCAAAACCAT+AGG | 0.517162 | 8_3:-51997166 | None:intergenic |
| CGGGTGTACAATAGTCACTC+GGG | 0.517256 | 8_3:-51996820 | None:intergenic |
| GCATTTGAGGACACTAAATC+CGG | 0.517777 | 8_3:-51997122 | None:intergenic |
| CAAACTTCTCATGAAACTAC+AGG | 0.517952 | 8_3:+51996555 | Msa1294250:CDS |
| TGGGCGCGGTCAGGATCCTC+GGG | 0.523654 | 8_3:+51997316 | Msa1294250:CDS |
| TCTGCTGCTGACAACTCAGC+AGG | 0.531521 | 8_3:+51997239 | Msa1294250:CDS |
| AGGATCCTCGGGTTGAAGAC+CGG | 0.532727 | 8_3:+51997327 | Msa1294250:CDS |
| AGCAGATATGAAACTATTGT+AGG | 0.534628 | 8_3:-51996457 | None:intergenic |
| ACACCTAGTGGTAGTGGTGT+TGG | 0.534720 | 8_3:+51996354 | Msa1294250:CDS |
| TTTCCCGGATTTGGTACTAC+CGG | 0.536092 | 8_3:+51996489 | Msa1294250:CDS |
| ATCAACGGTGGGCTTGAATG+TGG | 0.542951 | 8_3:+51997296 | Msa1294250:CDS |
| ACTGCTGACTACTGTGGAGC+TGG | 0.548407 | 8_3:+51996288 | Msa1294250:CDS |
| CCAACAACACCTAGTGGTAG+TGG | 0.549717 | 8_3:+51996348 | Msa1294250:CDS |
| CCGAGTGACTATTGTACACC+CGG | 0.550082 | 8_3:+51996821 | Msa1294250:CDS |
| AACTACAATTATGGTCCAGC+CGG | 0.554031 | 8_3:+51997068 | Msa1294250:CDS |
| TGATGGCTTGTTTCCCTGCG+GGG | 0.556357 | 8_3:-51997183 | None:intergenic |
| ACTTGGATTGCTACAATCAA+AGG | 0.557758 | 8_3:+51997402 | Msa1294250:CDS |
| ATGATGTGATTACTGGAAGA+TGG | 0.560376 | 8_3:+51997210 | Msa1294250:CDS |
| TATGGACCGTCTGGTGCAGT+TGG | 0.561589 | 8_3:-51996761 | None:intergenic |
| GCTTCGGATCCAAGAAAGAA+AGG | 0.574274 | 8_3:-51996186 | None:intergenic |
| GGTGGGCTTGAATGTGGGCG+CGG | 0.574686 | 8_3:+51997302 | Msa1294250:CDS |
| CGGGGTCATCCAAAACCATA+GGG | 0.575785 | 8_3:-51997165 | None:intergenic |
| TGTCATTCAGGACATCCCTA+TGG | 0.576454 | 8_3:+51997150 | Msa1294250:CDS |
| CCTCGGGTTGAAGACCGGAT+CGG | 0.578639 | 8_3:+51997332 | Msa1294250:CDS |
| ATCTTCCAGTAATCACATCA+TGG | 0.581870 | 8_3:-51997208 | None:intergenic |
| GCTGAGTTGTCAGCAGCAGA+TGG | 0.588520 | 8_3:-51997236 | None:intergenic |
| TCAACGGTGGGCTTGAATGT+GGG | 0.593771 | 8_3:+51997297 | Msa1294250:CDS |
| ATATTGTCAACTGTTGGGAG+TGG | 0.598502 | 8_3:+51997367 | Msa1294250:CDS |
| TATTGTCAACTGTTGGGAGT+GGG | 0.600964 | 8_3:+51997368 | Msa1294250:CDS |
| CTTGATGGCTTGTTTCCCTG+CGG | 0.601085 | 8_3:-51997185 | None:intergenic |
| CTTCCAACACCACTACCACT+AGG | 0.602608 | 8_3:-51996357 | None:intergenic |
| GGTAAAAGATACTACGGCAG+AGG | 0.614833 | 8_3:+51996863 | Msa1294250:CDS |
| GCTCCTGGTAAAAGATACTA+CGG | 0.615095 | 8_3:+51996857 | Msa1294250:CDS |
| TCACCGGTAGTACCAAATCC+GGG | 0.617852 | 8_3:-51996492 | None:intergenic |
| CCACTAGGTGTTGTTGGTGT+CGG | 0.619661 | 8_3:-51996342 | None:intergenic |
| ACCAGACGGTCCATACGCGT+GGG | 0.630386 | 8_3:+51996769 | Msa1294250:CDS |
| CTGCTGCTGACAACTCAGCA+GGG | 0.634020 | 8_3:+51997240 | Msa1294250:CDS |
| GTAGCAATCCAAGTTAGCAC+CGG | 0.635055 | 8_3:-51997393 | None:intergenic |
| GGGTGGCCAACTGCACCAGA+CGG | 0.640935 | 8_3:+51996755 | Msa1294250:CDS |
| ATCACCAACATAATCAACGG+TGG | 0.648299 | 8_3:+51997284 | Msa1294250:CDS |
| GTGTTGAAGTAGGTGTACAC+TGG | 0.650247 | 8_3:-51996320 | None:intergenic |
| CCGATCCGGTCTTCAACCCG+AGG | 0.655956 | 8_3:-51997332 | None:intergenic |
| CTTACGGGTGTTATCATCAC+CGG | 0.656769 | 8_3:-51996508 | None:intergenic |
| GGGTGTACAATAGTCACTCG+GGG | 0.657986 | 8_3:-51996819 | None:intergenic |
| GTGATCACCAACATAATCAA+CGG | 0.660417 | 8_3:+51997281 | Msa1294250:CDS |
| CTGCTGACAACTCAGCAGGG+AGG | 0.664427 | 8_3:+51997243 | Msa1294250:CDS |
| TCACCAACATAATCAACGGT+GGG | 0.667728 | 8_3:+51997285 | Msa1294250:CDS |
| GGCAACACTGCTGACTACTG+TGG | 0.678244 | 8_3:+51996282 | Msa1294250:CDS |
| TGGTGATCACGCCATATCCG+GGG | 0.679659 | 8_3:-51997268 | None:intergenic |
| GGATCCGAAGCTCAGCAATG+TGG | 0.714315 | 8_3:+51996198 | Msa1294250:CDS |
| CCGACACCAACAACACCTAG+TGG | 0.716597 | 8_3:+51996342 | Msa1294250:CDS |
| AATCCATTTCCAGCACAACG+TGG | 0.723881 | 8_3:-51996429 | None:intergenic |
| GGTGTACAATAGTCACTCGG+GGG | 0.760426 | 8_3:-51996818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGAAAAATAAAATAACA+TGG | - | chr8_3:51996969-51996988 | None:intergenic | 10.0% |
| !! | TTAAGAAAAATAAAATAACA+TGG | - | chr8_3:51996969-51996988 | None:intergenic | 10.0% |
| !!! | TAACTTTTTGTTTAGATAAT+TGG | + | chr8_3:51996592-51996611 | Msa1294250:intron | 15.0% |
| !!! | AATATGTTTGTTTTGAATTT+TGG | + | chr8_3:51996641-51996660 | Msa1294250:intron | 15.0% |
| !!! | TAACTTTTTGTTTAGATAAT+TGG | + | chr8_3:51996592-51996611 | Msa1294250:intron | 15.0% |
| !!! | AATATGTTTGTTTTGAATTT+TGG | + | chr8_3:51996641-51996660 | Msa1294250:intron | 15.0% |
| !!! | TCAAATGTTTTTGAGAATGT+AGG | + | chr8_3:51996731-51996750 | Msa1294250:intron | 25.0% |
| ! | ACATGGTTTGATATTTAGAT+GGG | - | chr8_3:51996952-51996971 | None:intergenic | 25.0% |
| ! | AACATGGTTTGATATTTAGA+TGG | - | chr8_3:51996953-51996972 | None:intergenic | 25.0% |
| ! | TAAACACTCATATCTATAAC+TGG | - | chr8_3:51997014-51997033 | None:intergenic | 25.0% |
| ! | GTTTATCAAATCTTCGTTAA+TGG | - | chr8_3:51997099-51997118 | None:intergenic | 25.0% |
| !!! | TCAAATGTTTTTGAGAATGT+AGG | + | chr8_3:51996731-51996750 | Msa1294250:intron | 25.0% |
| ! | ACATGGTTTGATATTTAGAT+GGG | - | chr8_3:51996952-51996971 | None:intergenic | 25.0% |
| ! | AACATGGTTTGATATTTAGA+TGG | - | chr8_3:51996953-51996972 | None:intergenic | 25.0% |
| ! | TAAACACTCATATCTATAAC+TGG | - | chr8_3:51997014-51997033 | None:intergenic | 25.0% |
| ! | GTTTATCAAATCTTCGTTAA+TGG | - | chr8_3:51997099-51997118 | None:intergenic | 25.0% |
| TGTTTACTACCTTTCTTTCT+TGG | + | chr8_3:51996177-51996196 | Msa1294250:CDS | 30.0% | |
| AGCAGATATGAAACTATTGT+AGG | - | chr8_3:51996460-51996479 | None:intergenic | 30.0% | |
| !! | AATGTTTTTGAGAATGTAGG+AGG | + | chr8_3:51996734-51996753 | Msa1294250:intron | 30.0% |
| !! | ATGTTTTTGAGAATGTAGGA+GGG | + | chr8_3:51996735-51996754 | Msa1294250:intron | 30.0% |
| ATGGTTTGATATTTAGATGG+GGG | - | chr8_3:51996950-51996969 | None:intergenic | 30.0% | |
| CATGGTTTGATATTTAGATG+GGG | - | chr8_3:51996951-51996970 | None:intergenic | 30.0% | |
| ATGAGTGTTTAGTGAACTAA+TGG | + | chr8_3:51997023-51997042 | Msa1294250:intron | 30.0% | |
| TGAGTGTTTAGTGAACTAAT+GGG | + | chr8_3:51997024-51997043 | Msa1294250:intron | 30.0% | |
| AATTGTAGTTGCTGTGATAA+AGG | - | chr8_3:51997058-51997077 | None:intergenic | 30.0% | |
| TATCACAGCAACTACAATTA+TGG | + | chr8_3:51997059-51997078 | Msa1294250:intron | 30.0% | |
| CGAAGATTTGATAAACAATC+CGG | + | chr8_3:51997103-51997122 | Msa1294250:CDS | 30.0% | |
| TAGAAGATATTGTCAACTGT+TGG | + | chr8_3:51997361-51997380 | Msa1294250:CDS | 30.0% | |
| AGAAGATATTGTCAACTGTT+GGG | + | chr8_3:51997362-51997381 | Msa1294250:CDS | 30.0% | |
| TGTTTACTACCTTTCTTTCT+TGG | + | chr8_3:51996177-51996196 | Msa1294250:CDS | 30.0% | |
| AGCAGATATGAAACTATTGT+AGG | - | chr8_3:51996460-51996479 | None:intergenic | 30.0% | |
| !! | AATGTTTTTGAGAATGTAGG+AGG | + | chr8_3:51996734-51996753 | Msa1294250:intron | 30.0% |
| !! | ATGTTTTTGAGAATGTAGGA+GGG | + | chr8_3:51996735-51996754 | Msa1294250:intron | 30.0% |
| ATGGTTTGATATTTAGATGG+GGG | - | chr8_3:51996950-51996969 | None:intergenic | 30.0% | |
| CATGGTTTGATATTTAGATG+GGG | - | chr8_3:51996951-51996970 | None:intergenic | 30.0% | |
| ATGAGTGTTTAGTGAACTAA+TGG | + | chr8_3:51997023-51997042 | Msa1294250:intron | 30.0% | |
| TGAGTGTTTAGTGAACTAAT+GGG | + | chr8_3:51997024-51997043 | Msa1294250:intron | 30.0% | |
| AATTGTAGTTGCTGTGATAA+AGG | - | chr8_3:51997058-51997077 | None:intergenic | 30.0% | |
| TATCACAGCAACTACAATTA+TGG | + | chr8_3:51997059-51997078 | Msa1294250:intron | 30.0% | |
| CGAAGATTTGATAAACAATC+CGG | + | chr8_3:51997103-51997122 | Msa1294250:CDS | 30.0% | |
| TAGAAGATATTGTCAACTGT+TGG | + | chr8_3:51997361-51997380 | Msa1294250:CDS | 30.0% | |
| AGAAGATATTGTCAACTGTT+GGG | + | chr8_3:51997362-51997381 | Msa1294250:CDS | 30.0% | |
| TGTTGCCACAATAACCAAAT+TGG | - | chr8_3:51996269-51996288 | None:intergenic | 35.0% | |
| CAAACTTCTCATGAAACTAC+AGG | + | chr8_3:51996555-51996574 | Msa1294250:CDS | 35.0% | |
| GTCACAATCAATAGTGTTTG+AGG | + | chr8_3:51996708-51996727 | Msa1294250:intron | 35.0% | |
| ! | GTATGGTTTGAAATGCTAGA+GGG | - | chr8_3:51996928-51996947 | None:intergenic | 35.0% |
| TTGATATTTAGATGGGGGTA+TGG | - | chr8_3:51996945-51996964 | None:intergenic | 35.0% | |
| ATCTTCCAGTAATCACATCA+TGG | - | chr8_3:51997211-51997230 | None:intergenic | 35.0% | |
| ATGATGTGATTACTGGAAGA+TGG | + | chr8_3:51997210-51997229 | Msa1294250:CDS | 35.0% | |
| GTGATCACCAACATAATCAA+CGG | + | chr8_3:51997281-51997300 | Msa1294250:CDS | 35.0% | |
| ATCTTCTATAAAACCCGATC+CGG | - | chr8_3:51997349-51997368 | None:intergenic | 35.0% | |
| ACTTGGATTGCTACAATCAA+AGG | + | chr8_3:51997402-51997421 | Msa1294250:CDS | 35.0% | |
| TGTTGCCACAATAACCAAAT+TGG | - | chr8_3:51996269-51996288 | None:intergenic | 35.0% | |
| CAAACTTCTCATGAAACTAC+AGG | + | chr8_3:51996555-51996574 | Msa1294250:CDS | 35.0% | |
| GTCACAATCAATAGTGTTTG+AGG | + | chr8_3:51996708-51996727 | Msa1294250:intron | 35.0% | |
| ! | GTATGGTTTGAAATGCTAGA+GGG | - | chr8_3:51996928-51996947 | None:intergenic | 35.0% |
| TTGATATTTAGATGGGGGTA+TGG | - | chr8_3:51996945-51996964 | None:intergenic | 35.0% | |
| ATCTTCCAGTAATCACATCA+TGG | - | chr8_3:51997211-51997230 | None:intergenic | 35.0% | |
| ATGATGTGATTACTGGAAGA+TGG | + | chr8_3:51997210-51997229 | Msa1294250:CDS | 35.0% | |
| GTGATCACCAACATAATCAA+CGG | + | chr8_3:51997281-51997300 | Msa1294250:CDS | 35.0% | |
| ATCTTCTATAAAACCCGATC+CGG | - | chr8_3:51997349-51997368 | None:intergenic | 35.0% | |
| ACTTGGATTGCTACAATCAA+AGG | + | chr8_3:51997402-51997421 | Msa1294250:CDS | 35.0% | |
| CAATGTGGTAGACAAGCTAA+TGG | + | chr8_3:51996213-51996232 | Msa1294250:CDS | 40.0% | |
| TGCAGCCAATTTGGTTATTG+TGG | + | chr8_3:51996261-51996280 | Msa1294250:CDS | 40.0% | |
| ACCAAATCCGGGAAAAGAAT+TGG | - | chr8_3:51996484-51996503 | None:intergenic | 40.0% | |
| AAGCACAAATTTCGCGCTTA+CGG | - | chr8_3:51996527-51996546 | None:intergenic | 40.0% | |
| CGCGAAATTTGTGCTTTCTT+AGG | + | chr8_3:51996531-51996550 | Msa1294250:CDS | 40.0% | |
| !! | TTTTTGAGAATGTAGGAGGG+TGG | + | chr8_3:51996738-51996757 | Msa1294250:intron | 40.0% |
| !! | TATCTTTTACCAGGAGCACA+TGG | - | chr8_3:51996854-51996873 | None:intergenic | 40.0% |
| GCTCCTGGTAAAAGATACTA+CGG | + | chr8_3:51996857-51996876 | Msa1294250:CDS | 40.0% | |
| ! | GCTTACTGAGTGAGTTGAAT+TGG | - | chr8_3:51996890-51996909 | None:intergenic | 40.0% |
| ! | GGTATGGTTTGAAATGCTAG+AGG | - | chr8_3:51996929-51996948 | None:intergenic | 40.0% |
| AACTACAATTATGGTCCAGC+CGG | + | chr8_3:51997068-51997087 | Msa1294250:CDS | 40.0% | |
| ! | ATCTTCGTTAATGGCTCTAC+CGG | - | chr8_3:51997090-51997109 | None:intergenic | 40.0% |
| GCATTTGAGGACACTAAATC+CGG | - | chr8_3:51997125-51997144 | None:intergenic | 40.0% | |
| GTAATCACATCATGGCTTGA+TGG | - | chr8_3:51997203-51997222 | None:intergenic | 40.0% | |
| TCAAGCCATGATGTGATTAC+TGG | + | chr8_3:51997203-51997222 | Msa1294250:CDS | 40.0% | |
| ATCACCAACATAATCAACGG+TGG | + | chr8_3:51997284-51997303 | Msa1294250:CDS | 40.0% | |
| TCACCAACATAATCAACGGT+GGG | + | chr8_3:51997285-51997304 | Msa1294250:CDS | 40.0% | |
| ATATTGTCAACTGTTGGGAG+TGG | + | chr8_3:51997367-51997386 | Msa1294250:CDS | 40.0% | |
| TATTGTCAACTGTTGGGAGT+GGG | + | chr8_3:51997368-51997387 | Msa1294250:CDS | 40.0% | |
| CAATGTGGTAGACAAGCTAA+TGG | + | chr8_3:51996213-51996232 | Msa1294250:CDS | 40.0% | |
| TGCAGCCAATTTGGTTATTG+TGG | + | chr8_3:51996261-51996280 | Msa1294250:CDS | 40.0% | |
| ACCAAATCCGGGAAAAGAAT+TGG | - | chr8_3:51996484-51996503 | None:intergenic | 40.0% | |
| AAGCACAAATTTCGCGCTTA+CGG | - | chr8_3:51996527-51996546 | None:intergenic | 40.0% | |
| CGCGAAATTTGTGCTTTCTT+AGG | + | chr8_3:51996531-51996550 | Msa1294250:CDS | 40.0% | |
| !! | TTTTTGAGAATGTAGGAGGG+TGG | + | chr8_3:51996738-51996757 | Msa1294250:intron | 40.0% |
| !! | TATCTTTTACCAGGAGCACA+TGG | - | chr8_3:51996854-51996873 | None:intergenic | 40.0% |
| GCTCCTGGTAAAAGATACTA+CGG | + | chr8_3:51996857-51996876 | Msa1294250:CDS | 40.0% | |
| ! | GCTTACTGAGTGAGTTGAAT+TGG | - | chr8_3:51996890-51996909 | None:intergenic | 40.0% |
| ! | GGTATGGTTTGAAATGCTAG+AGG | - | chr8_3:51996929-51996948 | None:intergenic | 40.0% |
| AACTACAATTATGGTCCAGC+CGG | + | chr8_3:51997068-51997087 | Msa1294250:CDS | 40.0% | |
| ! | ATCTTCGTTAATGGCTCTAC+CGG | - | chr8_3:51997090-51997109 | None:intergenic | 40.0% |
| GCATTTGAGGACACTAAATC+CGG | - | chr8_3:51997125-51997144 | None:intergenic | 40.0% | |
| GTAATCACATCATGGCTTGA+TGG | - | chr8_3:51997203-51997222 | None:intergenic | 40.0% | |
| TCAAGCCATGATGTGATTAC+TGG | + | chr8_3:51997203-51997222 | Msa1294250:CDS | 40.0% | |
| ATCACCAACATAATCAACGG+TGG | + | chr8_3:51997284-51997303 | Msa1294250:CDS | 40.0% | |
| TCACCAACATAATCAACGGT+GGG | + | chr8_3:51997285-51997304 | Msa1294250:CDS | 40.0% | |
| ATATTGTCAACTGTTGGGAG+TGG | + | chr8_3:51997367-51997386 | Msa1294250:CDS | 40.0% | |
| TATTGTCAACTGTTGGGAGT+GGG | + | chr8_3:51997368-51997387 | Msa1294250:CDS | 40.0% | |
| GCTTCGGATCCAAGAAAGAA+AGG | - | chr8_3:51996189-51996208 | None:intergenic | 45.0% | |
| TCTACCACATTGCTGAGCTT+CGG | - | chr8_3:51996205-51996224 | None:intergenic | 45.0% | |
| ATGGAGCTCTTTGCGCAAAT+AGG | + | chr8_3:51996232-51996251 | Msa1294250:CDS | 45.0% | |
| AGGTTCTGTTGCAGCCAATT+TGG | + | chr8_3:51996252-51996271 | Msa1294250:CDS | 45.0% | |
| GTGTTGAAGTAGGTGTACAC+TGG | - | chr8_3:51996323-51996342 | None:intergenic | 45.0% | |
| AATCCATTTCCAGCACAACG+TGG | - | chr8_3:51996432-51996451 | None:intergenic | 45.0% | |
| ! | TCTGCTGCCAATTCTTTTCC+CGG | + | chr8_3:51996474-51996493 | Msa1294250:CDS | 45.0% |
| ! | GCCAATTCTTTTCCCGGATT+TGG | + | chr8_3:51996480-51996499 | Msa1294250:CDS | 45.0% |
| ! | TTTCCCGGATTTGGTACTAC+CGG | + | chr8_3:51996489-51996508 | Msa1294250:CDS | 45.0% |
| ATCACCGGTAGTACCAAATC+CGG | - | chr8_3:51996496-51996515 | None:intergenic | 45.0% | |
| ! | CTTACGGGTGTTATCATCAC+CGG | - | chr8_3:51996511-51996530 | None:intergenic | 45.0% |
| AGCACAAATTTCGCGCTTAC+GGG | - | chr8_3:51996526-51996545 | None:intergenic | 45.0% | |
| ACTATTGTACACCCGGAACT+TGG | + | chr8_3:51996828-51996847 | Msa1294250:CDS | 45.0% | |
| ! | CTGCCGTAGTATCTTTTACC+AGG | - | chr8_3:51996863-51996882 | None:intergenic | 45.0% |
| GGTAAAAGATACTACGGCAG+AGG | + | chr8_3:51996863-51996882 | Msa1294250:CDS | 45.0% | |
| GAATGACACGACTGCATTTG+AGG | - | chr8_3:51997138-51997157 | None:intergenic | 45.0% | |
| ! | CAAATGCAGTCGTGTCATTC+AGG | + | chr8_3:51997138-51997157 | Msa1294250:CDS | 45.0% |
| TGTCATTCAGGACATCCCTA+TGG | + | chr8_3:51997150-51997169 | Msa1294250:CDS | 45.0% | |
| ! | TCAGGACATCCCTATGGTTT+TGG | + | chr8_3:51997156-51997175 | Msa1294250:CDS | 45.0% |
| ! | AAGCCCACCGTTGATTATGT+TGG | - | chr8_3:51997291-51997310 | None:intergenic | 45.0% |
| GTAGCAATCCAAGTTAGCAC+CGG | - | chr8_3:51997396-51997415 | None:intergenic | 45.0% | |
| GCTTCGGATCCAAGAAAGAA+AGG | - | chr8_3:51996189-51996208 | None:intergenic | 45.0% | |
| TCTACCACATTGCTGAGCTT+CGG | - | chr8_3:51996205-51996224 | None:intergenic | 45.0% | |
| ATGGAGCTCTTTGCGCAAAT+AGG | + | chr8_3:51996232-51996251 | Msa1294250:CDS | 45.0% | |
| AGGTTCTGTTGCAGCCAATT+TGG | + | chr8_3:51996252-51996271 | Msa1294250:CDS | 45.0% | |
| GTGTTGAAGTAGGTGTACAC+TGG | - | chr8_3:51996323-51996342 | None:intergenic | 45.0% | |
| AATCCATTTCCAGCACAACG+TGG | - | chr8_3:51996432-51996451 | None:intergenic | 45.0% | |
| ! | TCTGCTGCCAATTCTTTTCC+CGG | + | chr8_3:51996474-51996493 | Msa1294250:CDS | 45.0% |
| ! | GCCAATTCTTTTCCCGGATT+TGG | + | chr8_3:51996480-51996499 | Msa1294250:CDS | 45.0% |
| ! | TTTCCCGGATTTGGTACTAC+CGG | + | chr8_3:51996489-51996508 | Msa1294250:CDS | 45.0% |
| ATCACCGGTAGTACCAAATC+CGG | - | chr8_3:51996496-51996515 | None:intergenic | 45.0% | |
| ! | CTTACGGGTGTTATCATCAC+CGG | - | chr8_3:51996511-51996530 | None:intergenic | 45.0% |
| AGCACAAATTTCGCGCTTAC+GGG | - | chr8_3:51996526-51996545 | None:intergenic | 45.0% | |
| ACTATTGTACACCCGGAACT+TGG | + | chr8_3:51996828-51996847 | Msa1294250:CDS | 45.0% | |
| ! | CTGCCGTAGTATCTTTTACC+AGG | - | chr8_3:51996863-51996882 | None:intergenic | 45.0% |
| GGTAAAAGATACTACGGCAG+AGG | + | chr8_3:51996863-51996882 | Msa1294250:CDS | 45.0% | |
| GAATGACACGACTGCATTTG+AGG | - | chr8_3:51997138-51997157 | None:intergenic | 45.0% | |
| ! | CAAATGCAGTCGTGTCATTC+AGG | + | chr8_3:51997138-51997157 | Msa1294250:CDS | 45.0% |
| TGTCATTCAGGACATCCCTA+TGG | + | chr8_3:51997150-51997169 | Msa1294250:CDS | 45.0% | |
| ! | TCAGGACATCCCTATGGTTT+TGG | + | chr8_3:51997156-51997175 | Msa1294250:CDS | 45.0% |
| ! | AAGCCCACCGTTGATTATGT+TGG | - | chr8_3:51997291-51997310 | None:intergenic | 45.0% |
| GTAGCAATCCAAGTTAGCAC+CGG | - | chr8_3:51997396-51997415 | None:intergenic | 45.0% | |
| !! | GTTGGTGTCGGTGTTGAAGT+AGG | - | chr8_3:51996333-51996352 | None:intergenic | 50.0% |
| !! | CCACTAGGTGTTGTTGGTGT+CGG | - | chr8_3:51996345-51996364 | None:intergenic | 50.0% |
| ! | CCACTACCACTAGGTGTTGT+TGG | - | chr8_3:51996351-51996370 | None:intergenic | 50.0% |
| CCAACAACACCTAGTGGTAG+TGG | + | chr8_3:51996348-51996367 | Msa1294250:CDS | 50.0% | |
| !! | ACACCTAGTGGTAGTGGTGT+TGG | + | chr8_3:51996354-51996373 | Msa1294250:CDS | 50.0% |
| CTTCCAACACCACTACCACT+AGG | - | chr8_3:51996360-51996379 | None:intergenic | 50.0% | |
| CGAAATGATCCACGTTGTGC+TGG | + | chr8_3:51996420-51996439 | Msa1294250:CDS | 50.0% | |
| GATCCACGTTGTGCTGGAAA+TGG | + | chr8_3:51996426-51996445 | Msa1294250:CDS | 50.0% | |
| TCACCGGTAGTACCAAATCC+GGG | - | chr8_3:51996495-51996514 | None:intergenic | 50.0% | |
| AAGCAATATCCCCACGCGTA+TGG | - | chr8_3:51996782-51996801 | None:intergenic | 50.0% | |
| GGTGTACAATAGTCACTCGG+GGG | - | chr8_3:51996821-51996840 | None:intergenic | 50.0% | |
| GGGTGTACAATAGTCACTCG+GGG | - | chr8_3:51996822-51996841 | None:intergenic | 50.0% | |
| CGGGTGTACAATAGTCACTC+GGG | - | chr8_3:51996823-51996842 | None:intergenic | 50.0% | |
| CCGGGTGTACAATAGTCACT+CGG | - | chr8_3:51996824-51996843 | None:intergenic | 50.0% | |
| CCGAGTGACTATTGTACACC+CGG | + | chr8_3:51996821-51996840 | Msa1294250:CDS | 50.0% | |
| CGGGGTCATCCAAAACCATA+GGG | - | chr8_3:51997168-51997187 | None:intergenic | 50.0% | |
| !! | TTGATGGCTTGTTTCCCTGC+GGG | - | chr8_3:51997187-51997206 | None:intergenic | 50.0% |
| !! | CTTGATGGCTTGTTTCCCTG+CGG | - | chr8_3:51997188-51997207 | None:intergenic | 50.0% |
| ! | TTGGTGATCACGCCATATCC+GGG | - | chr8_3:51997272-51997291 | None:intergenic | 50.0% |
| !! | GTTGGTGATCACGCCATATC+CGG | - | chr8_3:51997273-51997292 | None:intergenic | 50.0% |
| ! | ATCAACGGTGGGCTTGAATG+TGG | + | chr8_3:51997296-51997315 | Msa1294250:CDS | 50.0% |
| ! | TCAACGGTGGGCTTGAATGT+GGG | + | chr8_3:51997297-51997316 | Msa1294250:CDS | 50.0% |
| !! | GTTGGTGTCGGTGTTGAAGT+AGG | - | chr8_3:51996333-51996352 | None:intergenic | 50.0% |
| !! | CCACTAGGTGTTGTTGGTGT+CGG | - | chr8_3:51996345-51996364 | None:intergenic | 50.0% |
| ! | CCACTACCACTAGGTGTTGT+TGG | - | chr8_3:51996351-51996370 | None:intergenic | 50.0% |
| CCAACAACACCTAGTGGTAG+TGG | + | chr8_3:51996348-51996367 | Msa1294250:CDS | 50.0% | |
| !! | ACACCTAGTGGTAGTGGTGT+TGG | + | chr8_3:51996354-51996373 | Msa1294250:CDS | 50.0% |
| CTTCCAACACCACTACCACT+AGG | - | chr8_3:51996360-51996379 | None:intergenic | 50.0% | |
| CGAAATGATCCACGTTGTGC+TGG | + | chr8_3:51996420-51996439 | Msa1294250:CDS | 50.0% | |
| GATCCACGTTGTGCTGGAAA+TGG | + | chr8_3:51996426-51996445 | Msa1294250:CDS | 50.0% | |
| TCACCGGTAGTACCAAATCC+GGG | - | chr8_3:51996495-51996514 | None:intergenic | 50.0% | |
| AAGCAATATCCCCACGCGTA+TGG | - | chr8_3:51996782-51996801 | None:intergenic | 50.0% | |
| GGTGTACAATAGTCACTCGG+GGG | - | chr8_3:51996821-51996840 | None:intergenic | 50.0% | |
| GGGTGTACAATAGTCACTCG+GGG | - | chr8_3:51996822-51996841 | None:intergenic | 50.0% | |
| CGGGTGTACAATAGTCACTC+GGG | - | chr8_3:51996823-51996842 | None:intergenic | 50.0% | |
| CCGGGTGTACAATAGTCACT+CGG | - | chr8_3:51996824-51996843 | None:intergenic | 50.0% | |
| CCGAGTGACTATTGTACACC+CGG | + | chr8_3:51996821-51996840 | Msa1294250:CDS | 50.0% | |
| CGGGGTCATCCAAAACCATA+GGG | - | chr8_3:51997168-51997187 | None:intergenic | 50.0% | |
| !! | TTGATGGCTTGTTTCCCTGC+GGG | - | chr8_3:51997187-51997206 | None:intergenic | 50.0% |
| !! | CTTGATGGCTTGTTTCCCTG+CGG | - | chr8_3:51997188-51997207 | None:intergenic | 50.0% |
| ! | TTGGTGATCACGCCATATCC+GGG | - | chr8_3:51997272-51997291 | None:intergenic | 50.0% |
| !! | GTTGGTGATCACGCCATATC+CGG | - | chr8_3:51997273-51997292 | None:intergenic | 50.0% |
| ! | ATCAACGGTGGGCTTGAATG+TGG | + | chr8_3:51997296-51997315 | Msa1294250:CDS | 50.0% |
| ! | TCAACGGTGGGCTTGAATGT+GGG | + | chr8_3:51997297-51997316 | Msa1294250:CDS | 50.0% |
| GGATCCGAAGCTCAGCAATG+TGG | + | chr8_3:51996198-51996217 | Msa1294250:CDS | 55.0% | |
| ! | GGCAACACTGCTGACTACTG+TGG | + | chr8_3:51996282-51996301 | Msa1294250:CDS | 55.0% |
| ! | ACTGCTGACTACTGTGGAGC+TGG | + | chr8_3:51996288-51996307 | Msa1294250:CDS | 55.0% |
| CCGACACCAACAACACCTAG+TGG | + | chr8_3:51996342-51996361 | Msa1294250:CDS | 55.0% | |
| TATGGACCGTCTGGTGCAGT+TGG | - | chr8_3:51996764-51996783 | None:intergenic | 55.0% | |
| ! | AGGAGCACATGGCCAAGTTC+CGG | - | chr8_3:51996843-51996862 | None:intergenic | 55.0% |
| ! | TCGTTAATGGCTCTACCGGC+TGG | - | chr8_3:51997086-51997105 | None:intergenic | 55.0% |
| GCGGGGTCATCCAAAACCAT+AGG | - | chr8_3:51997169-51997188 | None:intergenic | 55.0% | |
| !!! | ATGGTTTTGGATGACCCCGC+AGG | + | chr8_3:51997169-51997188 | Msa1294250:CDS | 55.0% |
| !!! | TGGTTTTGGATGACCCCGCA+GGG | + | chr8_3:51997170-51997189 | Msa1294250:CDS | 55.0% |
| !! | TGATGGCTTGTTTCCCTGCG+GGG | - | chr8_3:51997186-51997205 | None:intergenic | 55.0% |
| GCTGAGTTGTCAGCAGCAGA+TGG | - | chr8_3:51997239-51997258 | None:intergenic | 55.0% | |
| TCTGCTGCTGACAACTCAGC+AGG | + | chr8_3:51997239-51997258 | Msa1294250:CDS | 55.0% | |
| CTGCTGCTGACAACTCAGCA+GGG | + | chr8_3:51997240-51997259 | Msa1294250:CDS | 55.0% | |
| TGCTGACAACTCAGCAGGGA+GGG | + | chr8_3:51997244-51997263 | Msa1294250:CDS | 55.0% | |
| TGGTGATCACGCCATATCCG+GGG | - | chr8_3:51997271-51997290 | None:intergenic | 55.0% | |
| !! | AGGATCCTCGGGTTGAAGAC+CGG | + | chr8_3:51997327-51997346 | Msa1294250:CDS | 55.0% |
| GGATCCGAAGCTCAGCAATG+TGG | + | chr8_3:51996198-51996217 | Msa1294250:CDS | 55.0% | |
| ! | GGCAACACTGCTGACTACTG+TGG | + | chr8_3:51996282-51996301 | Msa1294250:CDS | 55.0% |
| ! | ACTGCTGACTACTGTGGAGC+TGG | + | chr8_3:51996288-51996307 | Msa1294250:CDS | 55.0% |
| CCGACACCAACAACACCTAG+TGG | + | chr8_3:51996342-51996361 | Msa1294250:CDS | 55.0% | |
| TATGGACCGTCTGGTGCAGT+TGG | - | chr8_3:51996764-51996783 | None:intergenic | 55.0% | |
| ! | AGGAGCACATGGCCAAGTTC+CGG | - | chr8_3:51996843-51996862 | None:intergenic | 55.0% |
| ! | TCGTTAATGGCTCTACCGGC+TGG | - | chr8_3:51997086-51997105 | None:intergenic | 55.0% |
| GCGGGGTCATCCAAAACCAT+AGG | - | chr8_3:51997169-51997188 | None:intergenic | 55.0% | |
| !!! | ATGGTTTTGGATGACCCCGC+AGG | + | chr8_3:51997169-51997188 | Msa1294250:CDS | 55.0% |
| !!! | TGGTTTTGGATGACCCCGCA+GGG | + | chr8_3:51997170-51997189 | Msa1294250:CDS | 55.0% |
| !! | TGATGGCTTGTTTCCCTGCG+GGG | - | chr8_3:51997186-51997205 | None:intergenic | 55.0% |
| GCTGAGTTGTCAGCAGCAGA+TGG | - | chr8_3:51997239-51997258 | None:intergenic | 55.0% | |
| TCTGCTGCTGACAACTCAGC+AGG | + | chr8_3:51997239-51997258 | Msa1294250:CDS | 55.0% | |
| CTGCTGCTGACAACTCAGCA+GGG | + | chr8_3:51997240-51997259 | Msa1294250:CDS | 55.0% | |
| TGCTGACAACTCAGCAGGGA+GGG | + | chr8_3:51997244-51997263 | Msa1294250:CDS | 55.0% | |
| TGGTGATCACGCCATATCCG+GGG | - | chr8_3:51997271-51997290 | None:intergenic | 55.0% | |
| !! | AGGATCCTCGGGTTGAAGAC+CGG | + | chr8_3:51997327-51997346 | Msa1294250:CDS | 55.0% |
| ACCAGACGGTCCATACGCGT+GGG | + | chr8_3:51996769-51996788 | Msa1294250:CDS | 60.0% | |
| GGAGCACATGGCCAAGTTCC+GGG | - | chr8_3:51996842-51996861 | None:intergenic | 60.0% | |
| GGAACTTGGCCATGTGCTCC+TGG | + | chr8_3:51996842-51996861 | Msa1294250:CDS | 60.0% | |
| CTGCTGACAACTCAGCAGGG+AGG | + | chr8_3:51997243-51997262 | Msa1294250:CDS | 60.0% | |
| !! | CCTCGGGTTGAAGACCGGAT+CGG | + | chr8_3:51997332-51997351 | Msa1294250:CDS | 60.0% |
| !! | CTCGGGTTGAAGACCGGATC+GGG | + | chr8_3:51997333-51997352 | Msa1294250:CDS | 60.0% |
| CAACTGTTGGGAGTGGGCAC+CGG | + | chr8_3:51997374-51997393 | Msa1294250:CDS | 60.0% | |
| !! | AGTGGGCACCGGTGCTAACT+TGG | + | chr8_3:51997385-51997404 | Msa1294250:CDS | 60.0% |
| ACCAGACGGTCCATACGCGT+GGG | + | chr8_3:51996769-51996788 | Msa1294250:CDS | 60.0% | |
| GGAGCACATGGCCAAGTTCC+GGG | - | chr8_3:51996842-51996861 | None:intergenic | 60.0% | |
| GGAACTTGGCCATGTGCTCC+TGG | + | chr8_3:51996842-51996861 | Msa1294250:CDS | 60.0% | |
| CTGCTGACAACTCAGCAGGG+AGG | + | chr8_3:51997243-51997262 | Msa1294250:CDS | 60.0% | |
| !! | CCTCGGGTTGAAGACCGGAT+CGG | + | chr8_3:51997332-51997351 | Msa1294250:CDS | 60.0% |
| !! | CTCGGGTTGAAGACCGGATC+GGG | + | chr8_3:51997333-51997352 | Msa1294250:CDS | 60.0% |
| CAACTGTTGGGAGTGGGCAC+CGG | + | chr8_3:51997374-51997393 | Msa1294250:CDS | 60.0% | |
| !! | AGTGGGCACCGGTGCTAACT+TGG | + | chr8_3:51997385-51997404 | Msa1294250:CDS | 60.0% |
| GGGTGGCCAACTGCACCAGA+CGG | + | chr8_3:51996755-51996774 | Msa1294250:CDS | 65.0% | |
| CACCAGACGGTCCATACGCG+TGG | + | chr8_3:51996768-51996787 | Msa1294250:CDS | 65.0% | |
| CCAGACGGTCCATACGCGTG+GGG | + | chr8_3:51996770-51996789 | Msa1294250:CDS | 65.0% | |
| AACTCAGCAGGGAGGGTCCC+CGG | + | chr8_3:51997251-51997270 | Msa1294250:CDS | 65.0% | |
| ! | GGTGGGCTTGAATGTGGGCG+CGG | + | chr8_3:51997302-51997321 | Msa1294250:CDS | 65.0% |
| GCTTGAATGTGGGCGCGGTC+AGG | + | chr8_3:51997307-51997326 | Msa1294250:CDS | 65.0% | |
| CCGATCCGGTCTTCAACCCG+AGG | - | chr8_3:51997335-51997354 | None:intergenic | 65.0% | |
| GGGTGGCCAACTGCACCAGA+CGG | + | chr8_3:51996755-51996774 | Msa1294250:CDS | 65.0% | |
| CACCAGACGGTCCATACGCG+TGG | + | chr8_3:51996768-51996787 | Msa1294250:CDS | 65.0% | |
| CCAGACGGTCCATACGCGTG+GGG | + | chr8_3:51996770-51996789 | Msa1294250:CDS | 65.0% | |
| AACTCAGCAGGGAGGGTCCC+CGG | + | chr8_3:51997251-51997270 | Msa1294250:CDS | 65.0% | |
| ! | GGTGGGCTTGAATGTGGGCG+CGG | + | chr8_3:51997302-51997321 | Msa1294250:CDS | 65.0% |
| GCTTGAATGTGGGCGCGGTC+AGG | + | chr8_3:51997307-51997326 | Msa1294250:CDS | 65.0% | |
| CCGATCCGGTCTTCAACCCG+AGG | - | chr8_3:51997335-51997354 | None:intergenic | 65.0% | |
| CCCCACGCGTATGGACCGTC+TGG | - | chr8_3:51996773-51996792 | None:intergenic | 70.0% | |
| GCAGGGAGGGTCCCCGGATA+TGG | + | chr8_3:51997257-51997276 | Msa1294250:CDS | 70.0% | |
| GTGGGCGCGGTCAGGATCCT+CGG | + | chr8_3:51997315-51997334 | Msa1294250:CDS | 70.0% | |
| TGGGCGCGGTCAGGATCCTC+GGG | + | chr8_3:51997316-51997335 | Msa1294250:CDS | 70.0% | |
| CCCCACGCGTATGGACCGTC+TGG | - | chr8_3:51996773-51996792 | None:intergenic | 70.0% | |
| GCAGGGAGGGTCCCCGGATA+TGG | + | chr8_3:51997257-51997276 | Msa1294250:CDS | 70.0% | |
| GTGGGCGCGGTCAGGATCCT+CGG | + | chr8_3:51997315-51997334 | Msa1294250:CDS | 70.0% | |
| TGGGCGCGGTCAGGATCCTC+GGG | + | chr8_3:51997316-51997335 | Msa1294250:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 51996141 | 51997436 | 51996141 | ID=Msa1294250;Name=Msa1294250 |
| chr8_3 | mRNA | 51996141 | 51997436 | 51996141 | ID=Msa1294250-mRNA-1;Parent=Msa1294250;Name=Msa1294250-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.5|0|1|1|1|3|0|318 |
| chr8_3 | exon | 51996141 | 51996576 | 51996141 | ID=Msa1294250-mRNA-1:exon:14635;Parent=Msa1294250-mRNA-1 |
| chr8_3 | exon | 51996753 | 51996903 | 51996753 | ID=Msa1294250-mRNA-1:exon:14636;Parent=Msa1294250-mRNA-1 |
| chr8_3 | exon | 51997067 | 51997436 | 51997067 | ID=Msa1294250-mRNA-1:exon:14637;Parent=Msa1294250-mRNA-1 |
| chr8_3 | CDS | 51996141 | 51996576 | 51996141 | ID=Msa1294250-mRNA-1:cds;Parent=Msa1294250-mRNA-1 |
| chr8_3 | CDS | 51996753 | 51996903 | 51996753 | ID=Msa1294250-mRNA-1:cds;Parent=Msa1294250-mRNA-1 |
| chr8_3 | CDS | 51997067 | 51997436 | 51997067 | ID=Msa1294250-mRNA-1:cds;Parent=Msa1294250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
