Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257900 | XP_003608776.4 | 90.654 | 321 | 16 | 1 | 1 | 321 | 1 | 307 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257900 | sp|Q9SZ63|NUD14_ARATH | 70.486 | 288 | 69 | 2 | 31 | 318 | 31 | 302 | 3.80e-141 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257900 | Msa1298970 | 0.861025 | 1.370413e-63 | -8.615850e-47 |
| Msa1170040 | Msa1257900 | -0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa0968320 | Msa1257900 | -0.801518 | 8.668760e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257900 | MtrunA17_Chr4g0056651 | 90.654 | 321 | 16 | 1 | 1 | 321 | 1 | 307 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257900 | AT4G11980.1 | 70.486 | 288 | 69 | 2 | 31 | 318 | 31 | 302 | 3.86e-142 | 404 |
Find 86 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCCTCTTCTGATTTC+TGG | 0.076913 | 8_2:+58926561 | Msa1257900:CDS |
| TCCTGTGGGAAGAATTATTT+TGG | 0.176950 | 8_2:+58930090 | Msa1257900:CDS |
| TTATGGTTTCTATAACTTAT+TGG | 0.177686 | 8_2:+58931307 | Msa1257900:three_prime_UTR |
| AGAAGGATTATTGCCTTCTT+TGG | 0.207755 | 8_2:+58931145 | Msa1257900:CDS |
| TATGGTTTCTATAACTTATT+GGG | 0.251061 | 8_2:+58931308 | Msa1257900:three_prime_UTR |
| GGTTGACCTCACTGCTTTCC+TGG | 0.256840 | 8_2:+58930378 | Msa1257900:CDS |
| TTATTATGTCTAGCTCCTTA+TGG | 0.271990 | 8_2:+58931290 | Msa1257900:three_prime_UTR |
| CTTCTTCTTAGAAATCAAAT+TGG | 0.277859 | 8_2:-58926426 | None:intergenic |
| AGGCAATAATCCTTCTTTCT+TGG | 0.280187 | 8_2:-58931138 | None:intergenic |
| TGGGAGTATGAAGTGGCTTT+AGG | 0.292010 | 8_2:-58926406 | None:intergenic |
| TCTTTCGTTACTCGTGTTCA+TGG | 0.318672 | 8_2:-58926285 | None:intergenic |
| CTCTGCGTAGCATTACAATT+AGG | 0.325402 | 8_2:-58931171 | None:intergenic |
| TGAACATGGGGAGCTGATTA+AGG | 0.331333 | 8_2:+58931034 | Msa1257900:CDS |
| CATAATTTGCAAACAGAGAA+TGG | 0.350954 | 8_2:+58926721 | Msa1257900:CDS |
| TGTGGCTATGCTGATACTTT+TGG | 0.352770 | 8_2:+58928630 | Msa1257900:CDS |
| GAGATTATTGACAAAGAAAC+AGG | 0.356462 | 8_2:+58927691 | Msa1257900:CDS |
| GTAAATCATGATCAGGTTCC+AGG | 0.362368 | 8_2:+58928583 | Msa1257900:CDS |
| TATTGTAGGCACAGCAGTTC+GGG | 0.366455 | 8_2:+58930150 | Msa1257900:CDS |
| TACAATTAGGTTGCCAAAGA+AGG | 0.375860 | 8_2:-58931158 | None:intergenic |
| AACAGGGAGTAGACATGTTT+GGG | 0.387600 | 8_2:+58927638 | Msa1257900:intron |
| AAACAGGGAGTAGACATGTT+TGG | 0.395153 | 8_2:+58927637 | Msa1257900:intron |
| TACTTGATGCGTGGACGATA+TGG | 0.403057 | 8_2:-58931353 | None:intergenic |
| AAACATGTTATGCAAATCAT+AGG | 0.412099 | 8_2:-58927725 | None:intergenic |
| AGCGAGAATGTGAACGGGTT+CGG | 0.418130 | 8_2:-58926531 | None:intergenic |
| GCTTTCCTGGACTCTTCAAC+TGG | 0.418805 | 8_2:+58930391 | Msa1257900:CDS |
| TTCTTCTTAGAAATCAAATT+GGG | 0.432810 | 8_2:-58926425 | None:intergenic |
| GTTCACATTCTCGCTGCTCC+TGG | 0.436111 | 8_2:+58926539 | Msa1257900:CDS |
| TGTTTCTTTGTCAATAATCT+CGG | 0.440352 | 8_2:-58927689 | None:intergenic |
| TCTGCGTTAGCAACTATAGA+AGG | 0.443276 | 8_2:-58926325 | None:intergenic |
| TAGTAAAGTAAATCATGATC+AGG | 0.463951 | 8_2:+58928576 | Msa1257900:intron |
| GAGACTGGCCTTCGTGAACA+TGG | 0.464259 | 8_2:+58931020 | Msa1257900:CDS |
| AACAGCAGATTGCAAGGTTC+TGG | 0.465296 | 8_2:+58931091 | Msa1257900:CDS |
| GTATGCTGTTCTTACTGATC+AGG | 0.474563 | 8_2:+58928669 | Msa1257900:CDS |
| ATAATTTGCAAACAGAGAAT+GGG | 0.475311 | 8_2:+58926722 | Msa1257900:CDS |
| TCTGAGAGTCATTGTACCAT+TGG | 0.480991 | 8_2:-58926752 | None:intergenic |
| AGCTCAATATATACAGGAGA+GGG | 0.481521 | 8_2:-58930427 | None:intergenic |
| GGCTGTTGCACTGTTAGAAA+TGG | 0.482756 | 8_2:+58931115 | Msa1257900:CDS |
| GATGACAAGGGTGATATTGT+AGG | 0.485313 | 8_2:+58930136 | Msa1257900:CDS |
| GACATGTTTGGGAAGCGCAT+TGG | 0.492141 | 8_2:+58927649 | Msa1257900:CDS |
| TGCTTCCAGTTGAAGAGTCC+AGG | 0.494978 | 8_2:-58930396 | None:intergenic |
| TGGTACCATACAAGAACCTT+TGG | 0.499032 | 8_2:+58931063 | Msa1257900:CDS |
| CAACCACTGCTTGAATAAAG+AGG | 0.500121 | 8_2:-58926698 | None:intergenic |
| ATATTGTAGGCACAGCAGTT+CGG | 0.501769 | 8_2:+58930149 | Msa1257900:CDS |
| TTAAAATAGTATAGAACATG+TGG | 0.507932 | 8_2:+58931429 | Msa1257900:three_prime_UTR |
| AATAAGTTATAGAAACCATA+AGG | 0.508019 | 8_2:-58931305 | None:intergenic |
| CCTCTTGCAAATACAATACC+TGG | 0.509588 | 8_2:-58928601 | None:intergenic |
| ATTGGATAGAGACTTTGCTC+TGG | 0.517325 | 8_2:+58931235 | Msa1257900:three_prime_UTR |
| AAATCAGAAGAGGAGACACC+AGG | 0.535597 | 8_2:-58926557 | None:intergenic |
| GTGCGCCAAAGGTTCTTGTA+TGG | 0.536766 | 8_2:-58931068 | None:intergenic |
| TTAGAAATGGCCAAGAAAGA+AGG | 0.541378 | 8_2:+58931128 | Msa1257900:CDS |
| TTGTTTACGCGGAAGCGTGA+TGG | 0.544245 | 8_2:-58926507 | None:intergenic |
| GGAATTGCCTGCTGGAATGT+TGG | 0.549721 | 8_2:+58930111 | Msa1257900:CDS |
| GAAGGCCAGTCTCTTTACCT+TGG | 0.550388 | 8_2:-58931010 | None:intergenic |
| ATTCCTCTTTATTCAAGCAG+TGG | 0.554918 | 8_2:+58926695 | Msa1257900:CDS |
| CCAGGTATTGTATTTGCAAG+AGG | 0.555102 | 8_2:+58928601 | Msa1257900:CDS |
| TGACAAAGAAACAGGGAACA+AGG | 0.558788 | 8_2:+58927699 | Msa1257900:CDS |
| TCCAAAATAATTCTTCCCAC+AGG | 0.563140 | 8_2:-58930091 | None:intergenic |
| TGGCAGGTTGAAGAAGAGAC+AGG | 0.570033 | 8_2:+58930331 | Msa1257900:intron |
| AGACTGGCCTTCGTGAACAT+GGG | 0.570468 | 8_2:+58931021 | Msa1257900:CDS |
| AGTATCAGCATAGCCACAGC+TGG | 0.570896 | 8_2:-58928625 | None:intergenic |
| ATCAAATTGGGAGTATGAAG+TGG | 0.572085 | 8_2:-58926413 | None:intergenic |
| TCATCGTCCAACATTCCAGC+AGG | 0.573349 | 8_2:-58930118 | None:intergenic |
| GCGCACAACAGCAGATTGCA+AGG | 0.575266 | 8_2:+58931085 | Msa1257900:CDS |
| CAAGCTAAATGTAGAAGACA+TGG | 0.576281 | 8_2:+58930357 | Msa1257900:CDS |
| GGAGCAGCGAGAATGTGAAC+GGG | 0.577923 | 8_2:-58926536 | None:intergenic |
| CATCTCCAAGGTAAAGAGAC+TGG | 0.580100 | 8_2:+58931005 | Msa1257900:CDS |
| AGGAGCAGCGAGAATGTGAA+CGG | 0.585766 | 8_2:-58926537 | None:intergenic |
| AGCAGATTGCAAGGTTCTGG+TGG | 0.586787 | 8_2:+58931094 | Msa1257900:CDS |
| AATCTGCTGTTGTGCGCCAA+AGG | 0.597228 | 8_2:-58931079 | None:intergenic |
| TTATAAGGCAAGAGTTCCTG+TGG | 0.602408 | 8_2:+58930075 | Msa1257900:intron |
| TGGAATGTTGGACGATGACA+AGG | 0.606260 | 8_2:+58930123 | Msa1257900:CDS |
| GACTGGCCTTCGTGAACATG+GGG | 0.615008 | 8_2:+58931022 | Msa1257900:CDS |
| GAGATCATCACACATCTCCA+AGG | 0.618343 | 8_2:+58930993 | Msa1257900:CDS |
| GAATGACCAGAAATCAGAAG+AGG | 0.626066 | 8_2:-58926567 | None:intergenic |
| AAGCTCAATATATACAGGAG+AGG | 0.630817 | 8_2:-58930428 | None:intergenic |
| GTGAGTCAATAACGATGACT+CGG | 0.650422 | 8_2:-58926483 | None:intergenic |
| TGTAGGCACAGCAGTTCGGG+AGG | 0.655418 | 8_2:+58930153 | Msa1257900:CDS |
| TATAAGGCAAGAGTTCCTGT+GGG | 0.664649 | 8_2:+58930076 | Msa1257900:intron |
| GCTCAATATATACAGGAGAG+GGG | 0.669054 | 8_2:-58930426 | None:intergenic |
| ATTTGCAAGAGGACCAGCTG+TGG | 0.669747 | 8_2:+58928612 | Msa1257900:CDS |
| ACGGGTTCGGATTGTTTACG+CGG | 0.696511 | 8_2:-58926518 | None:intergenic |
| TCAGCTCCCCATGTTCACGA+AGG | 0.700716 | 8_2:-58931028 | None:intergenic |
| AAGAGTCCAGGAAAGCAGTG+AGG | 0.702074 | 8_2:-58930384 | None:intergenic |
| GGAGCTGATTAAGGTGCGTG+TGG | 0.720710 | 8_2:+58931043 | Msa1257900:CDS |
| AGATTATTGACAAAGAAACA+GGG | 0.740365 | 8_2:+58927692 | Msa1257900:CDS |
| GGAATGTTGGACGATGACAA+GGG | 0.808727 | 8_2:+58930124 | Msa1257900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATGAATTGAAAAAT+AGG | - | chr8_2:58926592-58926611 | None:intergenic | 10.0% |
| !! | AAAAACAGTTATTTAAATAA+AGG | + | chr8_2:58928022-58928041 | Msa1257900:intron | 10.0% |
| !! | TATATATATATAAACAAACT+TGG | - | chr8_2:58928954-58928973 | None:intergenic | 10.0% |
| !! | TTATAAAGAAAATATTGTTA+TGG | - | chr8_2:58929996-58930015 | None:intergenic | 10.0% |
| !! | TTAAATTTCAATAAATTCAT+GGG | - | chr8_2:58930745-58930764 | None:intergenic | 10.0% |
| !! | GATATCATTAGAAAAAAAAA+AGG | + | chr8_2:58927229-58927248 | Msa1257900:intron | 15.0% |
| !! | ATAAGTTATTAAGAATGATT+TGG | + | chr8_2:58927325-58927344 | Msa1257900:intron | 15.0% |
| !!! | AATTTTGTTATTATGATTGT+AGG | - | chr8_2:58927597-58927616 | None:intergenic | 15.0% |
| !! | ACAATCATAATAACAAAATT+TGG | + | chr8_2:58927597-58927616 | Msa1257900:intron | 15.0% |
| !!! | AATAACTGTTTTTTTTAGAT+TGG | - | chr8_2:58928015-58928034 | None:intergenic | 15.0% |
| !! | TATTGTATGTATATTCATTT+GGG | - | chr8_2:58929396-58929415 | None:intergenic | 15.0% |
| !! | ATAAGGTAAATAAATATGTT+TGG | - | chr8_2:58930260-58930279 | None:intergenic | 15.0% |
| !! | CTTAAATTTCAATAAATTCA+TGG | - | chr8_2:58930746-58930765 | None:intergenic | 15.0% |
| !! | TTCTTCTTAGAAATCAAATT+GGG | - | chr8_2:58926428-58926447 | None:intergenic | 20.0% |
| !! | AATCTATTGCAAATTATAGA+GGG | + | chr8_2:58926883-58926902 | Msa1257900:intron | 20.0% |
| !! | CATTAGAAAAAAAAAAGGTA+TGG | + | chr8_2:58927234-58927253 | Msa1257900:intron | 20.0% |
| !! | TGATTCATGATACAATATTA+TGG | + | chr8_2:58927372-58927391 | Msa1257900:intron | 20.0% |
| !! | TTATTTGATGTTGTTAAGAT+TGG | + | chr8_2:58927425-58927444 | Msa1257900:intron | 20.0% |
| !! | ATCATAATAACAAAATTTGG+CGG | + | chr8_2:58927600-58927619 | Msa1257900:intron | 20.0% |
| !!! | GATTTTTTTTGGTATAAACA+GGG | + | chr8_2:58927622-58927641 | Msa1257900:intron | 20.0% |
| !!! | ATTTAAATAAAGGTGTTGAT+TGG | + | chr8_2:58928032-58928051 | Msa1257900:intron | 20.0% |
| !!! | TATGAATCAAATTTTTCTTG+AGG | - | chr8_2:58928175-58928194 | None:intergenic | 20.0% |
| !!! | TGTATATGATCTATATGTTT+TGG | - | chr8_2:58928931-58928950 | None:intergenic | 20.0% |
| !! | AAATGATCTCTATAATGAAT+TGG | + | chr8_2:58929133-58929152 | Msa1257900:intron | 20.0% |
| !! | GTATTGTATGTATATTCATT+TGG | - | chr8_2:58929397-58929416 | None:intergenic | 20.0% |
| !! | GAATCTATAATATTGTTAAC+AGG | + | chr8_2:58929705-58929724 | Msa1257900:intron | 20.0% |
| !! | CTGATATACAATATATCTAA+AGG | + | chr8_2:58929927-58929946 | Msa1257900:intron | 20.0% |
| !! | AAAAACAAACCAATTATATC+TGG | + | chr8_2:58930016-58930035 | Msa1257900:intron | 20.0% |
| !! | AATGAAATTCCAGATATAAT+TGG | - | chr8_2:58930028-58930047 | None:intergenic | 20.0% |
| !!! | TTATGCTGGATATTTTTATA+AGG | + | chr8_2:58930060-58930079 | Msa1257900:intron | 20.0% |
| !!! | TGAATGTTGTTATTTCAATA+AGG | - | chr8_2:58930277-58930296 | None:intergenic | 20.0% |
| !!! | TTCTTATTCTCTTTCTTTTT+CGG | + | chr8_2:58930907-58930926 | Msa1257900:intron | 20.0% |
| !! | AATAAGTTATAGAAACCATA+AGG | - | chr8_2:58931308-58931327 | None:intergenic | 20.0% |
| !! | TTATGGTTTCTATAACTTAT+TGG | + | chr8_2:58931307-58931326 | Msa1257900:three_prime_UTR | 20.0% |
| !! | TATGGTTTCTATAACTTATT+GGG | + | chr8_2:58931308-58931327 | Msa1257900:three_prime_UTR | 20.0% |
| !! | TTAAAATAGTATAGAACATG+TGG | + | chr8_2:58931429-58931448 | Msa1257900:three_prime_UTR | 20.0% |
| ! | TTGATGTAACCAAAAATACA+TGG | + | chr8_2:58926235-58926254 | Msa1257900:five_prime_UTR | 25.0% |
| ! | TGATGTAACCAAAAATACAT+GGG | + | chr8_2:58926236-58926255 | Msa1257900:five_prime_UTR | 25.0% |
| ! | CTTCTTCTTAGAAATCAAAT+TGG | - | chr8_2:58926429-58926448 | None:intergenic | 25.0% |
| !! | ATAATTTGCAAACAGAGAAT+GGG | + | chr8_2:58926722-58926741 | Msa1257900:CDS | 25.0% |
| ! | TTTAATTCAGGTGATTCATT+AGG | + | chr8_2:58926780-58926799 | Msa1257900:intron | 25.0% |
| ! | GAATCTATTGCAAATTATAG+AGG | + | chr8_2:58926882-58926901 | Msa1257900:intron | 25.0% |
| ! | ATCTATTGCAAATTATAGAG+GGG | + | chr8_2:58926884-58926903 | Msa1257900:intron | 25.0% |
| ! | TATCACAATGTAAGTATCTT+GGG | + | chr8_2:58926928-58926947 | Msa1257900:intron | 25.0% |
| !!! | AGTGCTTCTAGTTTAATTTA+TGG | + | chr8_2:58927032-58927051 | Msa1257900:intron | 25.0% |
| ! | TATGGTGAAAAAATATCACT+CGG | + | chr8_2:58927050-58927069 | Msa1257900:intron | 25.0% |
| !! | TAATAACTTATAGTTTTCCC+TGG | - | chr8_2:58927316-58927335 | None:intergenic | 25.0% |
| !! | AAGAATGATTTGGAACTAAA+TGG | + | chr8_2:58927335-58927354 | Msa1257900:intron | 25.0% |
| !!! | AAAATTTGGCGGATTTTTTT+TGG | + | chr8_2:58927611-58927630 | Msa1257900:intron | 25.0% |
| !!! | GGATTTTTTTTGGTATAAAC+AGG | + | chr8_2:58927621-58927640 | Msa1257900:intron | 25.0% |
| ! | TGTTTCTTTGTCAATAATCT+CGG | - | chr8_2:58927692-58927711 | None:intergenic | 25.0% |
| ! | AGATTATTGACAAAGAAACA+GGG | + | chr8_2:58927692-58927711 | Msa1257900:CDS | 25.0% |
| ! | AAACATGTTATGCAAATCAT+AGG | - | chr8_2:58927728-58927747 | None:intergenic | 25.0% |
| !!! | TTTTCATTATTAGCCTATTG+AGG | + | chr8_2:58927745-58927764 | Msa1257900:intron | 25.0% |
| ! | AGTCATTGTTCAAATAATGT+TGG | - | chr8_2:58927841-58927860 | None:intergenic | 25.0% |
| ! | CATTATTTGAACAATGACTA+CGG | + | chr8_2:58927842-58927861 | Msa1257900:intron | 25.0% |
| ! | TTTGAATAAAAGTTTCCCAA+AGG | + | chr8_2:58927877-58927896 | Msa1257900:intron | 25.0% |
| ! | AATAACCAAATAACTAAGCA+GGG | - | chr8_2:58928125-58928144 | None:intergenic | 25.0% |
| ! | CATATTTATCTTACCTTTCA+AGG | + | chr8_2:58928191-58928210 | Msa1257900:intron | 25.0% |
| ! | AAGTCGATGCATAAATATTT+AGG | + | chr8_2:58928226-58928245 | Msa1257900:intron | 25.0% |
| !! | ATTTTAAATGTCAAACGAAG+AGG | + | chr8_2:58928303-58928322 | Msa1257900:intron | 25.0% |
| !! | TTTTAAATGTCAAACGAAGA+GGG | + | chr8_2:58928304-58928323 | Msa1257900:intron | 25.0% |
| ! | AAAAGAAAGAAATCAGCATT+AGG | - | chr8_2:58928554-58928573 | None:intergenic | 25.0% |
| ! | TAGTAAAGTAAATCATGATC+AGG | + | chr8_2:58928576-58928595 | Msa1257900:intron | 25.0% |
| !! | TTTGAGATAATCAAGTTGTA+GGG | - | chr8_2:58929215-58929234 | None:intergenic | 25.0% |
| !! | ATTTGAGATAATCAAGTTGT+AGG | - | chr8_2:58929216-58929235 | None:intergenic | 25.0% |
| !!! | CATTTTGTTTATTGCTTTTC+CGG | + | chr8_2:58929358-58929377 | Msa1257900:intron | 25.0% |
| ! | AATATACATACAATACTCAG+AGG | + | chr8_2:58929401-58929420 | Msa1257900:intron | 25.0% |
| ! | AAAAAAAAAACGCCATGAAA+AGG | - | chr8_2:58929512-58929531 | None:intergenic | 25.0% |
| !! | TTTAAGGTACAAATTACACT+AGG | + | chr8_2:58929542-58929561 | Msa1257900:intron | 25.0% |
| !!! | GATAAGCACCATTTTTTTAT+TGG | - | chr8_2:58929568-58929587 | None:intergenic | 25.0% |
| ! | ATTCTGATGCAAAATTTCTT+TGG | - | chr8_2:58929689-58929708 | None:intergenic | 25.0% |
| ! | TCAACATAATATCTAATGAG+AGG | - | chr8_2:58929859-58929878 | None:intergenic | 25.0% |
| ! | AAAATATCCAGCATAAGAAT+AGG | - | chr8_2:58930056-58930075 | None:intergenic | 25.0% |
| ! | TATTTCATTTGCATCACTAA+TGG | + | chr8_2:58930219-58930238 | Msa1257900:intron | 25.0% |
| ! | GTTTAGTATCATGATATTGT+TGG | + | chr8_2:58930605-58930624 | Msa1257900:intron | 25.0% |
| ! | TATACATTAGCTGTCAAAAT+TGG | + | chr8_2:58930872-58930891 | Msa1257900:intron | 25.0% |
| !!! | TTTCTTTTTCGGTGTTATTA+GGG | + | chr8_2:58930918-58930937 | Msa1257900:intron | 25.0% |
| ! | AAAAACAGAAGAGAGATTAT+TGG | + | chr8_2:58931217-58931236 | Msa1257900:three_prime_UTR | 25.0% |
| ! | CATAATTTGCAAACAGAGAA+TGG | + | chr8_2:58926721-58926740 | Msa1257900:CDS | 30.0% |
| !!! | TCTCAGACAAGTTTTAATTC+AGG | + | chr8_2:58926768-58926787 | Msa1257900:CDS | 30.0% |
| TCTATTGCAAATTATAGAGG+GGG | + | chr8_2:58926885-58926904 | Msa1257900:intron | 30.0% | |
| GTATCACAATGTAAGTATCT+TGG | + | chr8_2:58926927-58926946 | Msa1257900:intron | 30.0% | |
| GTCTATCATACAAAATGATG+AGG | + | chr8_2:58926950-58926969 | Msa1257900:intron | 30.0% | |
| TGTATCCTAAACTATAAAGC+CGG | + | chr8_2:58927087-58927106 | Msa1257900:intron | 30.0% | |
| TACTATTGTAGAAAGGATGT+AGG | + | chr8_2:58927262-58927281 | Msa1257900:intron | 30.0% | |
| ACTATTGTAGAAAGGATGTA+GGG | + | chr8_2:58927263-58927282 | Msa1257900:intron | 30.0% | |
| ! | TAACCATTAGTTTGAGGTAA+AGG | + | chr8_2:58927286-58927305 | Msa1257900:intron | 30.0% |
| TTTCCTTTACCTCAAACTAA+TGG | - | chr8_2:58927292-58927311 | None:intergenic | 30.0% | |
| GAGATTATTGACAAAGAAAC+AGG | + | chr8_2:58927691-58927710 | Msa1257900:CDS | 30.0% | |
| AGACATGAAAATTCCTCAAT+AGG | - | chr8_2:58927761-58927780 | None:intergenic | 30.0% | |
| TTCAAATAATGTTGGAGATC+CGG | - | chr8_2:58927833-58927852 | None:intergenic | 30.0% | |
| !! | AGGTGAAAATTTTAGTAGCA+GGG | - | chr8_2:58927963-58927982 | None:intergenic | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | - | chr8_2:58927988-58928007 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | - | chr8_2:58927989-58928008 | None:intergenic | 30.0% |
| TTTAGATTGGCAAATGTTAG+TGG | - | chr8_2:58928002-58928021 | None:intergenic | 30.0% | |
| !! | TAAATAAAGGTGTTGATTGG+TGG | + | chr8_2:58928035-58928054 | Msa1257900:intron | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | - | chr8_2:58927988-58928007 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | - | chr8_2:58927989-58928008 | None:intergenic | 30.0% |
| TATAACCCTGCTTAGTTATT+TGG | + | chr8_2:58928117-58928136 | Msa1257900:intron | 30.0% | |
| CAATAACCAAATAACTAAGC+AGG | - | chr8_2:58928126-58928145 | None:intergenic | 30.0% | |
| TTCCTGATTGTACTAAACAT+GGG | - | chr8_2:58928255-58928274 | None:intergenic | 30.0% | |
| ATTCCTGATTGTACTAAACA+TGG | - | chr8_2:58928256-58928275 | None:intergenic | 30.0% | |
| CTAGACAGAAAAATATGTGT+GGG | - | chr8_2:58928380-58928399 | None:intergenic | 30.0% | |
| TCTAGACAGAAAAATATGTG+TGG | - | chr8_2:58928381-58928400 | None:intergenic | 30.0% | |
| AATTTGCAAACATCTGTCAT+AGG | + | chr8_2:58928440-58928459 | Msa1257900:intron | 30.0% | |
| !!! | CTATATGTTTTGGTTTGACA+GGG | - | chr8_2:58928921-58928940 | None:intergenic | 30.0% |
| !!! | TCTATATGTTTTGGTTTGAC+AGG | - | chr8_2:58928922-58928941 | None:intergenic | 30.0% |
| TCATCTAAAAACATCATCAC+TGG | - | chr8_2:58929114-58929133 | None:intergenic | 30.0% | |
| ! | CGTTGTCATGTTTCTATATT+AGG | + | chr8_2:58929311-58929330 | Msa1257900:intron | 30.0% |
| ! | TTAGGATTTTGTTCTTGACT+TGG | + | chr8_2:58929329-58929348 | Msa1257900:intron | 30.0% |
| ! | TTATAGATGAGACCTTTTCA+TGG | + | chr8_2:58929497-58929516 | Msa1257900:intron | 30.0% |
| ACACTAGGCCAATAAAAAAA+TGG | + | chr8_2:58929557-58929576 | Msa1257900:intron | 30.0% | |
| TGCTTATCACACTACAATAA+AGG | + | chr8_2:58929580-58929599 | Msa1257900:intron | 30.0% | |
| AATAAAGGAGACATAAGAGA+GGG | + | chr8_2:58929595-58929614 | Msa1257900:intron | 30.0% | |
| ATGCAAAATTTCTTTGGATC+AGG | - | chr8_2:58929683-58929702 | None:intergenic | 30.0% | |
| ATCAAGCGATAAAATTTCAC+CGG | + | chr8_2:58929794-58929813 | Msa1257900:intron | 30.0% | |
| GCAAAAAGCTCAATATATAC+AGG | - | chr8_2:58930436-58930455 | None:intergenic | 30.0% | |
| GATTTATATGCAATTCTGCA+TGG | - | chr8_2:58930714-58930733 | None:intergenic | 30.0% | |
| !!! | CTTTCTTTTTCGGTGTTATT+AGG | + | chr8_2:58930917-58930936 | Msa1257900:intron | 30.0% |
| ! | TTATTATGTCTAGCTCCTTA+TGG | + | chr8_2:58931290-58931309 | Msa1257900:three_prime_UTR | 30.0% |
| ! | TACTCACACCCATGTATTTT+TGG | - | chr8_2:58926247-58926266 | None:intergenic | 35.0% |
| ! | ATCAAATTGGGAGTATGAAG+TGG | - | chr8_2:58926416-58926435 | None:intergenic | 35.0% |
| ATTCCTCTTTATTCAAGCAG+TGG | + | chr8_2:58926695-58926714 | Msa1257900:CDS | 35.0% | |
| GTTGTATGGAACTGAATATC+AGG | + | chr8_2:58927114-58927133 | Msa1257900:intron | 35.0% | |
| GGATAGCTACTATTGTAGAA+AGG | + | chr8_2:58927255-58927274 | Msa1257900:intron | 35.0% | |
| ! | TTTGAGGTAAAGGAAAACCA+GGG | + | chr8_2:58927296-58927315 | Msa1257900:intron | 35.0% |
| ATAAGTTTCACTCGACAGTA+AGG | - | chr8_2:58927409-58927428 | None:intergenic | 35.0% | |
| ACTATCAACAACTGTTGATG+TGG | + | chr8_2:58927517-58927536 | Msa1257900:intron | 35.0% | |
| GATGTGGCTATTCAATCAAA+AGG | + | chr8_2:58927533-58927552 | Msa1257900:intron | 35.0% | |
| GGACATTCAATTGATATTCC+TGG | + | chr8_2:58927554-58927573 | Msa1257900:intron | 35.0% | |
| ATAAAAGTTTCCCAAAGGAG+TGG | + | chr8_2:58927882-58927901 | Msa1257900:intron | 35.0% | |
| GAACCTCCTAGATATTACTT+TGG | - | chr8_2:58927930-58927949 | None:intergenic | 35.0% | |
| !! | GAGGTGAAAATTTTAGTAGC+AGG | - | chr8_2:58927964-58927983 | None:intergenic | 35.0% |
| CAGGGTTATACTAATGTTAG+TGG | - | chr8_2:58928107-58928126 | None:intergenic | 35.0% | |
| CTGTGCTACAATATATAGAG+TGG | + | chr8_2:58928146-58928165 | Msa1257900:intron | 35.0% | |
| !! | TTATGCATCGACTTATATCC+AGG | - | chr8_2:58928220-58928239 | None:intergenic | 35.0% |
| TTCCCATGTTTAGTACAATC+AGG | + | chr8_2:58928250-58928269 | Msa1257900:intron | 35.0% | |
| TTAGTACAATCAGGAATGTC+TGG | + | chr8_2:58928259-58928278 | Msa1257900:intron | 35.0% | |
| !!! | CTGATACTTTTGGAATCAGA+GGG | + | chr8_2:58928640-58928659 | Msa1257900:CDS | 35.0% |
| CTTACTGATCAGGTATATGT+TGG | + | chr8_2:58928679-58928698 | Msa1257900:intron | 35.0% | |
| ATAATGTACGTATGCTGGTA+GGG | - | chr8_2:58928860-58928879 | None:intergenic | 35.0% | |
| AATAATGTACGTATGCTGGT+AGG | - | chr8_2:58928861-58928880 | None:intergenic | 35.0% | |
| CAGAAATAATGTACGTATGC+TGG | - | chr8_2:58928865-58928884 | None:intergenic | 35.0% | |
| AGACACATATACTAGACATC+TGG | + | chr8_2:58929063-58929082 | Msa1257900:intron | 35.0% | |
| TAGTGATTTAAGTGAGGACT+AGG | - | chr8_2:58929176-58929195 | None:intergenic | 35.0% | |
| GATGTCTAGTGATTTAAGTG+AGG | - | chr8_2:58929182-58929201 | None:intergenic | 35.0% | |
| CACTTAAATCACTAGACATC+AGG | + | chr8_2:58929182-58929201 | Msa1257900:intron | 35.0% | |
| ! | GTAGGAGCTTTGATTTAAGA+AGG | - | chr8_2:58929256-58929275 | None:intergenic | 35.0% |
| ATGCCTAACATAGTTACTGT+AGG | - | chr8_2:58929274-58929293 | None:intergenic | 35.0% | |
| ATACATACAATACTCAGAGG+TGG | + | chr8_2:58929404-58929423 | Msa1257900:intron | 35.0% | |
| TACATACAATACTCAGAGGT+GGG | + | chr8_2:58929405-58929424 | Msa1257900:intron | 35.0% | |
| CAATAAAGGAGACATAAGAG+AGG | + | chr8_2:58929594-58929613 | Msa1257900:intron | 35.0% | |
| !!! | GTGTTTATTTTGTAGCACAC+TGG | + | chr8_2:58929640-58929659 | Msa1257900:intron | 35.0% |
| CAAAATTTCTTTGGATCAGG+CGG | - | chr8_2:58929680-58929699 | None:intergenic | 35.0% | |
| TAAAGGTTGAGGTAAGAAAG+AGG | + | chr8_2:58929771-58929790 | Msa1257900:intron | 35.0% | |
| CAACTCTGATCCATAAAACT+CGG | - | chr8_2:58929836-58929855 | None:intergenic | 35.0% | |
| TTTCATGCCTATTCTTATGC+TGG | + | chr8_2:58930046-58930065 | Msa1257900:intron | 35.0% | |
| ! | TCCTGTGGGAAGAATTATTT+TGG | + | chr8_2:58930090-58930109 | Msa1257900:CDS | 35.0% |
| TCCAAAATAATTCTTCCCAC+AGG | - | chr8_2:58930094-58930113 | None:intergenic | 35.0% | |
| !!! | ATTATTTTGGAATTGCCTGC+TGG | + | chr8_2:58930103-58930122 | Msa1257900:CDS | 35.0% |
| !! | ATGTTTGGCTTGCAACTAAA+AGG | - | chr8_2:58930245-58930264 | None:intergenic | 35.0% |
| CAAGCTAAATGTAGAAGACA+TGG | + | chr8_2:58930357-58930376 | Msa1257900:CDS | 35.0% | |
| AGCTCAATATATACAGGAGA+GGG | - | chr8_2:58930430-58930449 | None:intergenic | 35.0% | |
| AAGCTCAATATATACAGGAG+AGG | - | chr8_2:58930431-58930450 | None:intergenic | 35.0% | |
| ATTGCATGCAGTTAAACTTC+TGG | + | chr8_2:58930654-58930673 | Msa1257900:intron | 35.0% | |
| !! | GTTAAACTTCTGGTCGTTTT+AGG | + | chr8_2:58930664-58930683 | Msa1257900:intron | 35.0% |
| TTAGAAATGGCCAAGAAAGA+AGG | + | chr8_2:58931128-58931147 | Msa1257900:CDS | 35.0% | |
| AGGCAATAATCCTTCTTTCT+TGG | - | chr8_2:58931141-58931160 | None:intergenic | 35.0% | |
| AGAAGGATTATTGCCTTCTT+TGG | + | chr8_2:58931145-58931164 | Msa1257900:CDS | 35.0% | |
| ! | TACAATTAGGTTGCCAAAGA+AGG | - | chr8_2:58931161-58931180 | None:intergenic | 35.0% |
| TCTTTCGTTACTCGTGTTCA+TGG | - | chr8_2:58926288-58926307 | None:intergenic | 40.0% | |
| TCTGCGTTAGCAACTATAGA+AGG | - | chr8_2:58926328-58926347 | None:intergenic | 40.0% | |
| ! | GAGCTTTTAAGCTTCTTCGA+TGG | + | chr8_2:58926346-58926365 | Msa1257900:exon | 40.0% |
| GTGAGTCAATAACGATGACT+CGG | - | chr8_2:58926486-58926505 | None:intergenic | 40.0% | |
| GAATGACCAGAAATCAGAAG+AGG | - | chr8_2:58926570-58926589 | None:intergenic | 40.0% | |
| CAACCACTGCTTGAATAAAG+AGG | - | chr8_2:58926701-58926720 | None:intergenic | 40.0% | |
| !! | GAGAATGGGATTTTAGCCAA+TGG | + | chr8_2:58926736-58926755 | Msa1257900:CDS | 40.0% |
| TCTGAGAGTCATTGTACCAT+TGG | - | chr8_2:58926755-58926774 | None:intergenic | 40.0% | |
| ACTAATCCATTTCATCCTCC+AGG | - | chr8_2:58927015-58927034 | None:intergenic | 40.0% | |
| ! | GTAGGGTAACCATTAGTTTG+AGG | + | chr8_2:58927280-58927299 | Msa1257900:intron | 40.0% |
| ! | GTTTGAGGTAAAGGAAAACC+AGG | + | chr8_2:58927295-58927314 | Msa1257900:intron | 40.0% |
| GATACATGAATGAACAGACC+AGG | - | chr8_2:58927575-58927594 | None:intergenic | 40.0% | |
| AAACAGGGAGTAGACATGTT+TGG | + | chr8_2:58927637-58927656 | Msa1257900:intron | 40.0% | |
| AACAGGGAGTAGACATGTTT+GGG | + | chr8_2:58927638-58927657 | Msa1257900:intron | 40.0% | |
| TGACAAAGAAACAGGGAACA+AGG | + | chr8_2:58927699-58927718 | Msa1257900:CDS | 40.0% | |
| ATAATGTTGGAGATCCGGAT+AGG | - | chr8_2:58927828-58927847 | None:intergenic | 40.0% | |
| GCACCAAAGTAATATCTAGG+AGG | + | chr8_2:58927924-58927943 | Msa1257900:intron | 40.0% | |
| TTAGTAGCAGGGATTGAACT+CGG | - | chr8_2:58927952-58927971 | None:intergenic | 40.0% | |
| !! | AAGGTGTTGATTGGTGGAAT+TGG | + | chr8_2:58928041-58928060 | Msa1257900:intron | 40.0% |
| TATATCCAGGATGCCTTGAA+AGG | - | chr8_2:58928207-58928226 | None:intergenic | 40.0% | |
| TGTGATTTCCATACGCTGAA+AGG | + | chr8_2:58928344-58928363 | Msa1257900:intron | 40.0% | |
| GTGATTTCCATACGCTGAAA+GGG | + | chr8_2:58928345-58928364 | Msa1257900:intron | 40.0% | |
| ! | TTTTCTGTCTAGAAGTCACG+AGG | + | chr8_2:58928388-58928407 | Msa1257900:intron | 40.0% |
| TTTCTGTCTAGAAGTCACGA+GGG | + | chr8_2:58928389-58928408 | Msa1257900:intron | 40.0% | |
| GTCATAGGATCCAAAATCCT+TGG | + | chr8_2:58928455-58928474 | Msa1257900:intron | 40.0% | |
| GTAAATCATGATCAGGTTCC+AGG | + | chr8_2:58928583-58928602 | Msa1257900:CDS | 40.0% | |
| CCTCTTGCAAATACAATACC+TGG | - | chr8_2:58928604-58928623 | None:intergenic | 40.0% | |
| ! | CCAGGTATTGTATTTGCAAG+AGG | + | chr8_2:58928601-58928620 | Msa1257900:CDS | 40.0% |
| ! | TGTGGCTATGCTGATACTTT+TGG | + | chr8_2:58928630-58928649 | Msa1257900:CDS | 40.0% |
| !!! | GCTGATACTTTTGGAATCAG+AGG | + | chr8_2:58928639-58928658 | Msa1257900:CDS | 40.0% |
| GTATGCTGTTCTTACTGATC+AGG | + | chr8_2:58928669-58928688 | Msa1257900:CDS | 40.0% | |
| GCTCCTACAGTAACTATGTT+AGG | + | chr8_2:58929268-58929287 | Msa1257900:intron | 40.0% | |
| ATTTGGGTAACGTTAACTGC+CGG | - | chr8_2:58929380-58929399 | None:intergenic | 40.0% | |
| TGGCACACTCAAATGTTGAT+TGG | - | chr8_2:58929454-58929473 | None:intergenic | 40.0% | |
| ACAAGAGTCACAATAAGTCG+TGG | - | chr8_2:58929474-58929493 | None:intergenic | 40.0% | |
| ATCAAACACGTTTCCCTTAG+AGG | + | chr8_2:58929738-58929757 | Msa1257900:intron | 40.0% | |
| TTATTTCCCCCAACCTCTAA+GGG | - | chr8_2:58929754-58929773 | None:intergenic | 40.0% | |
| TTTATTTCCCCCAACCTCTA+AGG | - | chr8_2:58929755-58929774 | None:intergenic | 40.0% | |
| TTAGAGGTTGGGGGAAATAA+AGG | + | chr8_2:58929754-58929773 | Msa1257900:intron | 40.0% | |
| AAGCGATAAAATTTCACCGG+TGG | + | chr8_2:58929797-58929816 | Msa1257900:intron | 40.0% | |
| AGCGATAAAATTTCACCGGT+GGG | + | chr8_2:58929798-58929817 | Msa1257900:intron | 40.0% | |
| ATAAAATTTCACCGGTGGGA+TGG | + | chr8_2:58929802-58929821 | Msa1257900:intron | 40.0% | |
| TTATAAGGCAAGAGTTCCTG+TGG | + | chr8_2:58930075-58930094 | Msa1257900:intron | 40.0% | |
| TATAAGGCAAGAGTTCCTGT+GGG | + | chr8_2:58930076-58930095 | Msa1257900:intron | 40.0% | |
| GATGACAAGGGTGATATTGT+AGG | + | chr8_2:58930136-58930155 | Msa1257900:CDS | 40.0% | |
| ATATTGTAGGCACAGCAGTT+CGG | + | chr8_2:58930149-58930168 | Msa1257900:CDS | 40.0% | |
| ACTTTGTGAAGTTGTGACTC+TGG | + | chr8_2:58930311-58930330 | Msa1257900:intron | 40.0% | |
| GCTCAATATATACAGGAGAG+GGG | - | chr8_2:58930429-58930448 | None:intergenic | 40.0% | |
| !!! | CTTTTTCGGTGTTATTAGGG+AGG | + | chr8_2:58930921-58930940 | Msa1257900:intron | 40.0% |
| TGGTACCATACAAGAACCTT+TGG | + | chr8_2:58931063-58931082 | Msa1257900:CDS | 40.0% | |
| CTCTGCGTAGCATTACAATT+AGG | - | chr8_2:58931174-58931193 | None:intergenic | 40.0% | |
| ATTGGATAGAGACTTTGCTC+TGG | + | chr8_2:58931235-58931254 | Msa1257900:three_prime_UTR | 40.0% | |
| ! | GCAGTATTTTACTTGATGCG+TGG | - | chr8_2:58931365-58931384 | None:intergenic | 40.0% |
| ! | TGGGAGTATGAAGTGGCTTT+AGG | - | chr8_2:58926409-58926428 | None:intergenic | 45.0% |
| AAATCAGAAGAGGAGACACC+AGG | - | chr8_2:58926560-58926579 | None:intergenic | 45.0% | |
| GTGTCTCCTCTTCTGATTTC+TGG | + | chr8_2:58926561-58926580 | Msa1257900:CDS | 45.0% | |
| !! | CATCGCCGGCTTTATAGTTT+AGG | - | chr8_2:58927095-58927114 | None:intergenic | 45.0% |
| ATAAAGCCGGCGATGTTGTA+TGG | + | chr8_2:58927100-58927119 | Msa1257900:intron | 45.0% | |
| TCAGTTCCATACAACATCGC+CGG | - | chr8_2:58927109-58927128 | None:intergenic | 45.0% | |
| AACTGTGTCCGCGTACATAT+TGG | + | chr8_2:58927802-58927821 | Msa1257900:intron | 45.0% | |
| ! | GGGGCACCAAAGTAATATCT+AGG | + | chr8_2:58927921-58927940 | Msa1257900:intron | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | - | chr8_2:58927983-58928002 | None:intergenic | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | - | chr8_2:58927983-58928002 | None:intergenic | 45.0% |
| ! | TCTTACCTTTCAAGGCATCC+TGG | + | chr8_2:58928199-58928218 | Msa1257900:intron | 45.0% |
| !! | ACGAAGAGGGTATCATATGC+AGG | + | chr8_2:58928317-58928336 | Msa1257900:intron | 45.0% |
| !! | CGAAGAGGGTATCATATGCA+GGG | + | chr8_2:58928318-58928337 | Msa1257900:intron | 45.0% |
| ATCCAAAATCCTTGGAACCC+AGG | + | chr8_2:58928463-58928482 | Msa1257900:intron | 45.0% | |
| ! | ATCCTGGGTTCCAAGGATTT+TGG | - | chr8_2:58928468-58928487 | None:intergenic | 45.0% |
| ACCCAGGATGTGATAGACAT+CGG | + | chr8_2:58928479-58928498 | Msa1257900:intron | 45.0% | |
| AACACGTTTCCCTTAGAGGT+TGG | + | chr8_2:58929742-58929761 | Msa1257900:intron | 45.0% | |
| ACACGTTTCCCTTAGAGGTT+GGG | + | chr8_2:58929743-58929762 | Msa1257900:intron | 45.0% | |
| GTTGGGGGAAATAAAGGTTG+AGG | + | chr8_2:58929760-58929779 | Msa1257900:intron | 45.0% | |
| CTCTGATCCATAAAACTCGG+TGG | - | chr8_2:58929833-58929852 | None:intergenic | 45.0% | |
| TGGAATGTTGGACGATGACA+AGG | + | chr8_2:58930123-58930142 | Msa1257900:CDS | 45.0% | |
| GGAATGTTGGACGATGACAA+GGG | + | chr8_2:58930124-58930143 | Msa1257900:CDS | 45.0% | |
| TATTGTAGGCACAGCAGTTC+GGG | + | chr8_2:58930150-58930169 | Msa1257900:CDS | 45.0% | |
| TGCATTGCAATGCTTCTGCA+TGG | + | chr8_2:58930568-58930587 | Msa1257900:intron | 45.0% | |
| GAGATCATCACACATCTCCA+AGG | + | chr8_2:58930993-58931012 | Msa1257900:CDS | 45.0% | |
| CATCTCCAAGGTAAAGAGAC+TGG | + | chr8_2:58931005-58931024 | Msa1257900:CDS | 45.0% | |
| TGAACATGGGGAGCTGATTA+AGG | + | chr8_2:58931034-58931053 | Msa1257900:CDS | 45.0% | |
| AACAGCAGATTGCAAGGTTC+TGG | + | chr8_2:58931091-58931110 | Msa1257900:CDS | 45.0% | |
| GGCTGTTGCACTGTTAGAAA+TGG | + | chr8_2:58931115-58931134 | Msa1257900:CDS | 45.0% | |
| TACTTGATGCGTGGACGATA+TGG | - | chr8_2:58931356-58931375 | None:intergenic | 45.0% | |
| !!! | TATTTATTTTTTTCTATTAT+AGG | + | chr8_2:58926662-58926681 | Msa1257900:intron | 5.0% |
| !! | TAAATAAACTAATAAATATA+TGG | - | chr8_2:58928517-58928536 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTACTTTA+AGG | + | chr8_2:58929526-58929545 | Msa1257900:intron | 5.0% |
| ! | TTGTTTACGCGGAAGCGTGA+TGG | - | chr8_2:58926510-58926529 | None:intergenic | 50.0% |
| ACGGGTTCGGATTGTTTACG+CGG | - | chr8_2:58926521-58926540 | None:intergenic | 50.0% | |
| ! | AGCGAGAATGTGAACGGGTT+CGG | - | chr8_2:58926534-58926553 | None:intergenic | 50.0% |
| AGGAGCAGCGAGAATGTGAA+CGG | - | chr8_2:58926540-58926559 | None:intergenic | 50.0% | |
| GTATCCTTAGAGTCGAAGCC+TGG | + | chr8_2:58926994-58927013 | Msa1257900:intron | 50.0% | |
| TCGAAGCCTGGAGGATGAAA+TGG | + | chr8_2:58927006-58927025 | Msa1257900:intron | 50.0% | |
| ! | GACATGTTTGGGAAGCGCAT+TGG | + | chr8_2:58927649-58927668 | Msa1257900:CDS | 50.0% |
| CGGATAGGCCAATATGTACG+CGG | - | chr8_2:58927813-58927832 | None:intergenic | 50.0% | |
| ! | CGCGTACATATTGGCCTATC+CGG | + | chr8_2:58927811-58927830 | Msa1257900:intron | 50.0% |
| TACCACTTGGCCACTCCTTT+GGG | - | chr8_2:58927895-58927914 | None:intergenic | 50.0% | |
| ATACCACTTGGCCACTCCTT+TGG | - | chr8_2:58927896-58927915 | None:intergenic | 50.0% | |
| AGTGGCCAAGTGGTATGTGT+CGG | + | chr8_2:58927900-58927919 | Msa1257900:intron | 50.0% | |
| TGTGATGCCCTTTCAGCGTA+TGG | - | chr8_2:58928355-58928374 | None:intergenic | 50.0% | |
| CTATCACATCCTGGGTTCCA+AGG | - | chr8_2:58928475-58928494 | None:intergenic | 50.0% | |
| CCCGATGTCTATCACATCCT+GGG | - | chr8_2:58928483-58928502 | None:intergenic | 50.0% | |
| CCCAGGATGTGATAGACATC+GGG | + | chr8_2:58928480-58928499 | Msa1257900:intron | 50.0% | |
| ACCCGATGTCTATCACATCC+TGG | - | chr8_2:58928484-58928503 | None:intergenic | 50.0% | |
| ATTTGCAAGAGGACCAGCTG+TGG | + | chr8_2:58928612-58928631 | Msa1257900:CDS | 50.0% | |
| AGTATCAGCATAGCCACAGC+TGG | - | chr8_2:58928628-58928647 | None:intergenic | 50.0% | |
| TGGCAGACACTACTACTGCT+GGG | - | chr8_2:58929434-58929453 | None:intergenic | 50.0% | |
| TTGGCAGACACTACTACTGC+TGG | - | chr8_2:58929435-58929454 | None:intergenic | 50.0% | |
| AAGAGAGGGTGACAGTGAGA+TGG | + | chr8_2:58929609-58929628 | Msa1257900:intron | 50.0% | |
| CACGTTTCCCTTAGAGGTTG+GGG | + | chr8_2:58929744-58929763 | Msa1257900:intron | 50.0% | |
| ACGTTTCCCTTAGAGGTTGG+GGG | + | chr8_2:58929745-58929764 | Msa1257900:intron | 50.0% | |
| ! | GGTGAGTCCACCGAGTTTTA+TGG | + | chr8_2:58929823-58929842 | Msa1257900:intron | 50.0% |
| GGAATTGCCTGCTGGAATGT+TGG | + | chr8_2:58930111-58930130 | Msa1257900:CDS | 50.0% | |
| TCATCGTCCAACATTCCAGC+AGG | - | chr8_2:58930121-58930140 | None:intergenic | 50.0% | |
| TGTGAAGTTGTGACTCTGGC+AGG | + | chr8_2:58930315-58930334 | Msa1257900:intron | 50.0% | |
| ! | TGGCAGGTTGAAGAAGAGAC+AGG | + | chr8_2:58930331-58930350 | Msa1257900:intron | 50.0% |
| AAGAGTCCAGGAAAGCAGTG+AGG | - | chr8_2:58930387-58930406 | None:intergenic | 50.0% | |
| GCTTTCCTGGACTCTTCAAC+TGG | + | chr8_2:58930391-58930410 | Msa1257900:CDS | 50.0% | |
| TGCTTCCAGTTGAAGAGTCC+AGG | - | chr8_2:58930399-58930418 | None:intergenic | 50.0% | |
| GAAGGCCAGTCTCTTTACCT+TGG | - | chr8_2:58931013-58931032 | None:intergenic | 50.0% | |
| !! | AGACTGGCCTTCGTGAACAT+GGG | + | chr8_2:58931021-58931040 | Msa1257900:CDS | 50.0% |
| GTGCGCCAAAGGTTCTTGTA+TGG | - | chr8_2:58931071-58931090 | None:intergenic | 50.0% | |
| AATCTGCTGTTGTGCGCCAA+AGG | - | chr8_2:58931082-58931101 | None:intergenic | 50.0% | |
| ! | AGCAGATTGCAAGGTTCTGG+TGG | + | chr8_2:58931094-58931113 | Msa1257900:CDS | 50.0% |
| GGAGCAGCGAGAATGTGAAC+GGG | - | chr8_2:58926539-58926558 | None:intergenic | 55.0% | |
| GTTCACATTCTCGCTGCTCC+TGG | + | chr8_2:58926539-58926558 | Msa1257900:CDS | 55.0% | |
| TCCTTAGAGTCGAAGCCTGG+AGG | + | chr8_2:58926997-58927016 | Msa1257900:intron | 55.0% | |
| TCCTCCAGGCTTCGACTCTA+AGG | - | chr8_2:58927001-58927020 | None:intergenic | 55.0% | |
| TTCCCAAAGGAGTGGCCAAG+TGG | + | chr8_2:58927890-58927909 | Msa1257900:intron | 55.0% | |
| GTGGCCAAGTGGTATGTGTC+GGG | + | chr8_2:58927901-58927920 | Msa1257900:intron | 55.0% | |
| TGGCCAAGTGGTATGTGTCG+GGG | + | chr8_2:58927902-58927921 | Msa1257900:intron | 55.0% | |
| GGTTGACCTCACTGCTTTCC+TGG | + | chr8_2:58930378-58930397 | Msa1257900:CDS | 55.0% | |
| !! | GAGACTGGCCTTCGTGAACA+TGG | + | chr8_2:58931020-58931039 | Msa1257900:CDS | 55.0% |
| !! | GACTGGCCTTCGTGAACATG+GGG | + | chr8_2:58931022-58931041 | Msa1257900:CDS | 55.0% |
| TCAGCTCCCCATGTTCACGA+AGG | - | chr8_2:58931031-58931050 | None:intergenic | 55.0% | |
| GGAGCTGATTAAGGTGCGTG+TGG | + | chr8_2:58931043-58931062 | Msa1257900:CDS | 55.0% | |
| GCGCACAACAGCAGATTGCA+AGG | + | chr8_2:58931085-58931104 | Msa1257900:CDS | 55.0% | |
| GTGCCCCGACACATACCACT+TGG | - | chr8_2:58927908-58927927 | None:intergenic | 60.0% | |
| TGTAGGCACAGCAGTTCGGG+AGG | + | chr8_2:58930153-58930172 | Msa1257900:CDS | 60.0% | |
| ! | CGGTGGACTCACCATCCCAC+CGG | - | chr8_2:58929816-58929835 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58926219 | 58931458 | 58926219 | ID=Msa1257900;Name=Msa1257900 |
| chr8_2 | mRNA | 58926219 | 58931458 | 58926219 | ID=Msa1257900-mRNA-1;Parent=Msa1257900;Name=Msa1257900-mRNA-1;_AED=0.20;_eAED=0.20;_QI=146|0.83|0.71|1|1|1|7|283|321 |
| chr8_2 | exon | 58926219 | 58926582 | 58926219 | ID=Msa1257900-mRNA-1:exon:18234;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58926684 | 58926789 | 58926684 | ID=Msa1257900-mRNA-1:exon:18235;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58927643 | 58927743 | 58927643 | ID=Msa1257900-mRNA-1:exon:18236;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58928579 | 58928690 | 58928579 | ID=Msa1257900-mRNA-1:exon:18237;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58930082 | 58930174 | 58930082 | ID=Msa1257900-mRNA-1:exon:18238;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58930337 | 58930435 | 58930337 | ID=Msa1257900-mRNA-1:exon:18239;Parent=Msa1257900-mRNA-1 |
| chr8_2 | exon | 58930939 | 58931458 | 58930939 | ID=Msa1257900-mRNA-1:exon:18240;Parent=Msa1257900-mRNA-1 |
| chr8_2 | five_prime_UTR | 58926219 | 58926364 | 58926219 | ID=Msa1257900-mRNA-1:five_prime_utr;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58926365 | 58926582 | 58926365 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58926684 | 58926789 | 58926684 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58927643 | 58927743 | 58927643 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58928579 | 58928690 | 58928579 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58930082 | 58930174 | 58930082 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58930337 | 58930435 | 58930337 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | CDS | 58930939 | 58931175 | 58930939 | ID=Msa1257900-mRNA-1:cds;Parent=Msa1257900-mRNA-1 |
| chr8_2 | three_prime_UTR | 58931176 | 58931458 | 58931176 | ID=Msa1257900-mRNA-1:three_prime_utr;Parent=Msa1257900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
