AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1259100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259100 MtrunA17_Chr3g0097771 64.583 48 17 0 152 199 468 515 1.40e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 94 sgRNAs with CRISPR-Local

Find 571 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTCTTATCTTTGGTTCC+TGG 0.195860 8_2:-60532462 Msa1259100:three_prime_UTR
GCTCAGGAGTTAGTCTTATT+AGG 0.212071 8_2:-60537239 Msa1259100:CDS
TGATGCATTGCTTTGATTAT+TGG 0.229935 8_2:-60532270 None:intergenic
CATCTGTCTGGTCTTATCTT+TGG 0.236205 8_2:-60532469 Msa1259100:three_prime_UTR
TGCCTTTACTGTAGTTTCTA+AGG 0.247816 8_2:-60532374 Msa1259100:three_prime_UTR
ATTTGATACAATTCTTTCTT+TGG 0.260065 8_2:+60532826 None:intergenic
GTCTTAAAAGAGAATGTTTA+GGG 0.318959 8_2:-60537687 None:intergenic
AGTCTTAAAAGAGAATGTTT+AGG 0.322915 8_2:-60537688 None:intergenic
TTAGGTGTTGTGTGGAGTTA+TGG 0.330967 8_2:-60532399 Msa1259100:three_prime_UTR
CTTTCTTTGGTTGGACCATA+AGG 0.341992 8_2:+60532839 None:intergenic
CTCAGGAGTTAGTCTTATTA+GGG 0.342503 8_2:-60537238 Msa1259100:CDS
TGGTCTTATCTTTGGTTCCT+GGG 0.349096 8_2:-60532461 Msa1259100:three_prime_UTR
GTCTTTCCAAGAGGGGTGTT+TGG 0.353577 8_2:-60537348 Msa1259100:CDS
TTTGGAGGGAGGGCAGAAAA+GGG 0.355737 8_2:-60537416 Msa1259100:intron
GCCTCTTAGTTAGCTTCCCT+TGG 0.358199 8_2:+60532709 None:intergenic
TGGAGGGAGGGCAGAAAAGG+GGG 0.360523 8_2:-60537414 Msa1259100:intron
GTTTGGAGGGAGGGCAGAAA+AGG 0.370842 8_2:-60537417 Msa1259100:intron
AGTCGTGGAGTGCGAGGAGG+GGG 0.376394 8_2:-60537299 Msa1259100:CDS
CTTTAAAGCCTCATAAAATC+AGG 0.398749 8_2:+60532497 None:intergenic
TTGGAGGGAGGGCAGAAAAG+GGG 0.405445 8_2:-60537415 Msa1259100:intron
GATGCTGTTGCTGATTTAGC+TGG 0.413781 8_2:-60537538 Msa1259100:CDS
CAAGTCGTGGAGTGCGAGGA+GGG 0.415067 8_2:-60537301 Msa1259100:CDS
GCCTCAAAGAGGCGGCTTGA+TGG 0.417643 8_2:-60532761 Msa1259100:CDS
GGGGAATGGATGCACCCTTA+TGG 0.418648 8_2:-60532854 Msa1259100:CDS
TTTCTTTGGTTGGACCATAA+GGG 0.423121 8_2:+60532840 None:intergenic
AACTCAATTTCTTAATCAAA+CGG 0.423913 8_2:-60537190 Msa1259100:CDS
CATCGTCCAAACACCCCTCT+TGG 0.428788 8_2:+60537342 None:intergenic
TTATGTTCCAGGGATATGTT+GGG 0.429619 8_2:-60532874 Msa1259100:intron
ACCATCAAGCCGCCTCTTTG+AGG 0.435602 8_2:+60532760 None:intergenic
TTGTCGTGTGCCAAGCAGTT+TGG 0.437649 8_2:-60532526 Msa1259100:three_prime_UTR
CCTCCTCGCACTCCACGACT+TGG 0.437826 8_2:+60537302 None:intergenic
GATACAATTCTTTCTTTGGT+TGG 0.444244 8_2:+60532830 None:intergenic
AACGTCAGGAAGGTTGGTGG+TGG 0.448286 8_2:-60532659 Msa1259100:three_prime_UTR
TTTCTTAATCAAACGGAAAG+AGG 0.449813 8_2:-60537183 Msa1259100:intron
GGGTGTTTGGACGATGGAAG+TGG 0.456560 8_2:-60537335 Msa1259100:CDS
CGTCAGGAAGGTTGGTGGTG+GGG 0.456633 8_2:-60532657 Msa1259100:three_prime_UTR
TTTATGTTCCAGGGATATGT+TGG 0.462766 8_2:-60532875 Msa1259100:intron
TTTAAAGTGTCTCATCTGTC+TGG 0.466211 8_2:-60532481 Msa1259100:three_prime_UTR
TGCAAGATAGAATCACATTA+CGG 0.471749 8_2:+60532577 None:intergenic
CCTCTTAGTTAGCTTCCCTT+GGG 0.479328 8_2:+60532710 None:intergenic
AGTTAGCTTCCCTTGGGAGA+TGG 0.485070 8_2:+60532716 None:intergenic
TCCTATGTGAAGAGCTCACT+TGG 0.485233 8_2:+60537378 None:intergenic
AGGCTAAGCAAAGAATTAGA+AGG 0.489821 8_2:-60537495 Msa1259100:CDS
AACGAAGGATCGTCAACGTC+AGG 0.492242 8_2:-60532673 Msa1259100:three_prime_UTR
ACGTCAGGAAGGTTGGTGGT+GGG 0.501101 8_2:-60532658 Msa1259100:three_prime_UTR
TCGTGGAGTGCGAGGAGGGG+GGG 0.503724 8_2:-60537297 Msa1259100:CDS
GGTGTTTGGACGATGGAAGT+GGG 0.507293 8_2:-60537334 Msa1259100:CDS
GAAATGTGCAGGTGTGTTGG+TGG 0.511392 8_2:-60532614 Msa1259100:three_prime_UTR
AAGTCGTGGAGTGCGAGGAG+GGG 0.522960 8_2:-60537300 Msa1259100:CDS
AGGAAAGGCTTACAATGTAC+AGG 0.525754 8_2:+60532312 None:intergenic
AACAATATATTCGAAACTAC+AGG 0.526350 8_2:+60532292 None:intergenic
GCAGTTCTACAAAGTGGCTC+AGG 0.526582 8_2:-60537255 Msa1259100:CDS
ATTGAAATGTGCAGGTGTGT+TGG 0.530564 8_2:-60532617 Msa1259100:three_prime_UTR
ATCGTCAACGTCAGGAAGGT+TGG 0.537489 8_2:-60532665 Msa1259100:three_prime_UTR
AGCCTTAGAAACTACAGTAA+AGG 0.542399 8_2:+60532372 None:intergenic
GTGGAGTTTGTATCAGAAGA+GGG 0.546458 8_2:-60537439 Msa1259100:intron
CAAGAGGGGTGTTTGGACGA+TGG 0.550912 8_2:-60537341 Msa1259100:CDS
GTAAGTAGCACCGACAAGCT+TGG 0.553147 8_2:-60532803 Msa1259100:CDS
TCCAGGGATATGTTGGGGAA+TGG 0.553705 8_2:-60532868 Msa1259100:intron
TAATCAAGTGGAGGTGGTGT+CGG 0.554399 8_2:-60537214 Msa1259100:CDS
TAGGGATAATCAAGTGGAGG+TGG 0.560543 8_2:-60537220 Msa1259100:CDS
CCCAAGGGAAGCTAACTAAG+AGG 0.562495 8_2:-60532710 Msa1259100:exon
AGATAACTGACCAAGCTTGT+CGG 0.571146 8_2:+60532793 None:intergenic
AAGGTAGTGTCTTTCCAAGA+GGG 0.578226 8_2:-60537356 Msa1259100:CDS
AGTGAGCTCTTCACATAGGA+AGG 0.580294 8_2:-60537375 Msa1259100:CDS
ATGCTGTTGCTGATTTAGCT+GGG 0.580690 8_2:-60537537 Msa1259100:CDS
GTCGTGGAGTGCGAGGAGGG+GGG 0.581371 8_2:-60537298 Msa1259100:CDS
CCAAGTCGTGGAGTGCGAGG+AGG 0.582446 8_2:-60537302 Msa1259100:CDS
AGTGGAGTTTGTATCAGAAG+AGG 0.583467 8_2:-60537440 Msa1259100:CDS
TCGAAATCGTCCATCTCCCA+AGG 0.589418 8_2:-60532726 Msa1259100:CDS
TATATTCGAAACTACAGGAA+AGG 0.590569 8_2:+60532297 None:intergenic
GTCAACGTCAGGAAGGTTGG+TGG 0.594005 8_2:-60532662 Msa1259100:three_prime_UTR
TTAGGGGCAAAAGAAGGTGC+AGG 0.595010 8_2:-60537670 Msa1259100:CDS
GGGGCAAAAGAAGGTGCAGG+AGG 0.601395 8_2:-60537667 Msa1259100:CDS
GGCTTCGGCTAAACAACAAG+TGG 0.602189 8_2:-60537458 Msa1259100:CDS
AAGGATCGTCAACGTCAGGA+AGG 0.602900 8_2:-60532669 Msa1259100:three_prime_UTR
TGTCCAAGTCGTGGAGTGCG+AGG 0.604434 8_2:-60537305 Msa1259100:CDS
GAATGTTTAGGGGCAAAAGA+AGG 0.607535 8_2:-60537676 Msa1259100:CDS
TAACAGTCTAAAACAATCCC+AGG 0.609516 8_2:+60532444 None:intergenic
TATGTTCCAGGGATATGTTG+GGG 0.611382 8_2:-60532873 Msa1259100:intron
GCAACTGCAGTTCTACAAAG+TGG 0.615328 8_2:-60537261 Msa1259100:CDS
TCTTATTAGGGATAATCAAG+TGG 0.615783 8_2:-60537226 Msa1259100:CDS
GGGAGTGATTGTCCAAGTCG+TGG 0.617947 8_2:-60537314 Msa1259100:CDS
GGGCAAAAGAAGGTGCAGGA+GGG 0.638994 8_2:-60537666 Msa1259100:CDS
TATCGAATGCCTCAAAGAGG+CGG 0.642616 8_2:-60532769 Msa1259100:CDS
ACCAAGTGAGCTCTTCACAT+AGG 0.662524 8_2:-60537379 Msa1259100:CDS
GAAGGTAGTGTCTTTCCAAG+AGG 0.666242 8_2:-60537357 Msa1259100:CDS
AAGGGAAGCTAACTAAGAGG+CGG 0.675482 8_2:-60532707 Msa1259100:exon
CGAAATCGTCCATCTCCCAA+GGG 0.675696 8_2:-60532725 Msa1259100:CDS
TATTAGGGATAATCAAGTGG+AGG 0.675877 8_2:-60537223 Msa1259100:CDS
CTGTATCGAATGCCTCAAAG+AGG 0.677618 8_2:-60532772 Msa1259100:CDS
AGGTAGTGTCTTTCCAAGAG+GGG 0.682870 8_2:-60537355 Msa1259100:CDS
TCTTAAAAGAGAATGTTTAG+GGG 0.685424 8_2:-60537686 None:intergenic
GCGGATTGTGTAGAAAACGA+AGG 0.714705 8_2:-60532688 Msa1259100:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAATAAAATTATTAAAC+AGG + chr8_2:60533452-60533471 None:intergenic 10.0%
!!! TAATAATTTTATTAATGAAG+CGG - chr8_2:60533455-60533474 Msa1259100:intron 10.0%
!!! AATTTATTGTTCTATTTTCA+AGG - chr8_2:60533184-60533203 Msa1259100:intron 15.0%
!!! ATTTAATTTTGCTTTTGTTA+AGG - chr8_2:60534329-60534348 Msa1259100:intron 15.0%
!!! AAATTGTTTAATTTTCAAAG+TGG - chr8_2:60534673-60534692 Msa1259100:intron 15.0%
!! CAAAAAAGATAAGAAAAATT+GGG + chr8_2:60535373-60535392 None:intergenic 15.0%
!! TCAAAAAAGATAAGAAAAAT+TGG + chr8_2:60535374-60535393 None:intergenic 15.0%
!! TTATTCAATTTCAAATCAAA+AGG - chr8_2:60535851-60535870 Msa1259100:intron 15.0%
!!! TTAAATTGTAACTTTTAATC+TGG - chr8_2:60536454-60536473 Msa1259100:intron 15.0%
!!! AGTTATTTATACTCATTTTA+AGG - chr8_2:60537040-60537059 Msa1259100:intron 15.0%
!! AACTCAATTTCTTAATCAAA+CGG - chr8_2:60532755-60532774 Msa1259100:CDS 20.0%
!! CAATAATTATTAAAACGGAA+AGG + chr8_2:60533684-60533703 None:intergenic 20.0%
!!! CTTTCCGTTTTAATAATTAT+TGG - chr8_2:60533682-60533701 Msa1259100:intron 20.0%
!!! TCCAAAATCAGAATTTTAAA+GGG - chr8_2:60533706-60533725 Msa1259100:intron 20.0%
!! AAAAGCAAAATTAAATCCAT+CGG + chr8_2:60534325-60534344 None:intergenic 20.0%
!!! AATTTTTTGAATTGTAGTGA+AGG - chr8_2:60535175-60535194 Msa1259100:intron 20.0%
!!! GGACATAAATATATTAGTTT+TGG - chr8_2:60535308-60535327 Msa1259100:intron 20.0%
!!! CATAAATATATTAGTTTTGG+AGG - chr8_2:60535311-60535330 Msa1259100:intron 20.0%
!!! CTTATCTTTTTTGAAAATGT+CGG - chr8_2:60535380-60535399 Msa1259100:intron 20.0%
!!! TTTGAAATTGAATAAAGTCT+TGG + chr8_2:60535846-60535865 None:intergenic 20.0%
!!! ACCATATATTTTTGATCTAA+TGG - chr8_2:60536477-60536496 Msa1259100:intron 20.0%
!! ACCATTAGATCAAAAATATA+TGG + chr8_2:60536481-60536500 None:intergenic 20.0%
!!! TATATTTTTGATCTAATGGT+CGG - chr8_2:60536481-60536500 Msa1259100:intron 20.0%
!! TAATTATATAAGAGAGAATG+AGG - chr8_2:60536591-60536610 Msa1259100:intron 20.0%
!! ATTTGATACAATTCTTTCTT+TGG + chr8_2:60537122-60537141 None:intergenic 20.0%
!!! AATGTTTTTTCTGTGTTTTT+AGG - chr8_2:60537528-60537547 Msa1259100:CDS 20.0%
!!! TTTACTTTCGTAGATATTTT+TGG - chr8_2:60537595-60537614 Msa1259100:intron 20.0%
!! GAATGAACATCAAATTTTGA+AGG - chr8_2:60532430-60532449 Msa1259100:three_prime_UTR 25.0%
!!! TTGTAACACCAATTCTTTTT+TGG + chr8_2:60532811-60532830 None:intergenic 25.0%
!!! AAAAGAATTGGTGTTACAAA+AGG - chr8_2:60532812-60532831 Msa1259100:CDS 25.0%
!!! ACAAAATAAGGTGGATTTTT+TGG - chr8_2:60533021-60533040 Msa1259100:intron 25.0%
!!! TTGTTCTATTTTCAAGGAAA+TGG - chr8_2:60533190-60533209 Msa1259100:intron 25.0%
!! AATTGATAGGGTTCTTATTT+CGG - chr8_2:60533548-60533567 Msa1259100:intron 25.0%
! GGAGCCAATAATTATTAAAA+CGG + chr8_2:60533689-60533708 None:intergenic 25.0%
!! CTCCAAAATCAGAATTTTAA+AGG - chr8_2:60533705-60533724 Msa1259100:intron 25.0%
!!! CCAAAATCAGAATTTTAAAG+GGG - chr8_2:60533707-60533726 Msa1259100:intron 25.0%
!!! TGTTCTAAAAGAAAAGTTGA+AGG - chr8_2:60533779-60533798 Msa1259100:intron 25.0%
!! AAATTTGGTGGAAGATATTA+AGG - chr8_2:60533866-60533885 Msa1259100:intron 25.0%
!! AATCCAAGTTTGATGATTTA+TGG - chr8_2:60533946-60533965 Msa1259100:intron 25.0%
!! CAAATAATCATTTTCTTCCT+CGG + chr8_2:60534232-60534251 None:intergenic 25.0%
! AAAGCAAAATTAAATCCATC+GGG + chr8_2:60534324-60534343 None:intergenic 25.0%
! TCTTTATAAGCTTTCATCTA+AGG - chr8_2:60534515-60534534 Msa1259100:intron 25.0%
!!! GTTTTTTGGAATATATGATG+AGG - chr8_2:60534729-60534748 Msa1259100:intron 25.0%
! GCAACTAACAAAAAAAGAAA+GGG + chr8_2:60534893-60534912 None:intergenic 25.0%
!!! CTTTCTTTTTTTGTTAGTTG+CGG - chr8_2:60534892-60534911 Msa1259100:intron 25.0%
! ATTCAAAAAATTACAAGCCA+TGG + chr8_2:60535167-60535186 None:intergenic 25.0%
! TTCAATTTCAAATCAAAAGG+AGG - chr8_2:60535854-60535873 Msa1259100:intron 25.0%
! ATCTACAAAGCTTATAAATC+AGG + chr8_2:60536311-60536330 None:intergenic 25.0%
!! AAAATCAATTTTTCCGAACA+AGG - chr8_2:60536368-60536387 Msa1259100:intron 25.0%
! TCATCATTCTCATATAAGAT+AGG - chr8_2:60536513-60536532 Msa1259100:intron 25.0%
! AACACAAAATGAGCATTATA+AGG + chr8_2:60536665-60536684 None:intergenic 25.0%
! AAACATCACTTATACTTCTT+TGG + chr8_2:60536692-60536711 None:intergenic 25.0%
!! TGTGTAGTTTTTAATGTCAA+AGG - chr8_2:60536729-60536748 Msa1259100:intron 25.0%
!! TAAGCTTAATTTAAGATAGC+AGG + chr8_2:60536949-60536968 None:intergenic 25.0%
!!! TAATTTTGATTGAAATGTGC+AGG - chr8_2:60537320-60537339 Msa1259100:CDS 25.0%
! AACAATATATTCGAAACTAC+AGG + chr8_2:60537656-60537675 None:intergenic 25.0%
! CCACAAAAACTGATGTTTTA+AGG + chr8_2:60532320-60532339 None:intergenic 30.0%
! CCTTAAAACATCAGTTTTTG+TGG - chr8_2:60532317-60532336 Msa1259100:three_prime_UTR 30.0%
! TAAAACATCAGTTTTTGTGG+CGG - chr8_2:60532320-60532339 Msa1259100:three_prime_UTR 30.0%
TAGAAGGAAGAAAAATTCAG+TGG - chr8_2:60532466-60532485 Msa1259100:three_prime_UTR 30.0%
TCTTATTAGGGATAATCAAG+TGG - chr8_2:60532719-60532738 Msa1259100:CDS 30.0%
TTTCTTAATCAAACGGAAAG+AGG - chr8_2:60532762-60532781 Msa1259100:CDS 30.0%
AGTGAAACTTAAGGAAGATA+TGG - chr8_2:60532905-60532924 Msa1259100:intron 30.0%
TTGTGACGACCTTTAATATA+AGG - chr8_2:60532951-60532970 Msa1259100:intron 30.0%
TGTGACGACCTTTAATATAA+GGG - chr8_2:60532952-60532971 Msa1259100:intron 30.0%
GAAGAATAAGATTCGTGATT+TGG - chr8_2:60532994-60533013 Msa1259100:intron 30.0%
!! TGATTTGGTGAGACAAAATA+AGG - chr8_2:60533009-60533028 Msa1259100:intron 30.0%
TTTCAAGGAAATGGTTATGT+AGG - chr8_2:60533199-60533218 Msa1259100:intron 30.0%
TTCAAGGAAATGGTTATGTA+GGG - chr8_2:60533200-60533219 Msa1259100:intron 30.0%
TTATTCCAAGTGTGAATTGT+TGG - chr8_2:60533273-60533292 Msa1259100:intron 30.0%
TGTTTCGTCATCTCAATTAT+TGG - chr8_2:60533419-60533438 Msa1259100:intron 30.0%
! TTTTATTAATGAAGCGGAGT+TGG - chr8_2:60533461-60533480 Msa1259100:intron 30.0%
! TTGGAGGATTTGAATGTTTT+GGG - chr8_2:60533480-60533499 Msa1259100:intron 30.0%
ATCGATGAGTAGAATTGATA+GGG - chr8_2:60533536-60533555 Msa1259100:intron 30.0%
TTATTAAAACGGAAAGGCTT+CGG + chr8_2:60533678-60533697 None:intergenic 30.0%
!!! CCCCTTTAAAATTCTGATTT+TGG + chr8_2:60533710-60533729 None:intergenic 30.0%
!! AAATCAGAATTTTAAAGGGG+TGG - chr8_2:60533710-60533729 Msa1259100:intron 30.0%
ATTAAGGACCTTGATGAAAA+AGG - chr8_2:60533882-60533901 Msa1259100:intron 30.0%
TTAAGGACCTTGATGAAAAA+GGG - chr8_2:60533883-60533902 Msa1259100:intron 30.0%
TGATTTATGGAGGACTTTAA+AGG - chr8_2:60533959-60533978 Msa1259100:intron 30.0%
!!! GTTTTTTACGATACAAGTAG+CGG - chr8_2:60534155-60534174 Msa1259100:intron 30.0%
CGAGGAAGAAAATGATTATT+TGG - chr8_2:60534230-60534249 Msa1259100:intron 30.0%
!! TTGCTTTTGTTAAGGAGTTT+TGG - chr8_2:60534337-60534356 Msa1259100:intron 30.0%
TTGGTATTTGATTAATGACG+AGG - chr8_2:60534356-60534375 Msa1259100:intron 30.0%
AATATTACCGAATAGCATGT+TGG - chr8_2:60534413-60534432 Msa1259100:intron 30.0%
AAATATGCCAACATGCTATT+CGG + chr8_2:60534423-60534442 None:intergenic 30.0%
TTATAATCCCTTAACTCCAA+CGG + chr8_2:60534474-60534493 None:intergenic 30.0%
! TATAAGCCTATTTCTTTGCT+TGG - chr8_2:60534489-60534508 Msa1259100:intron 30.0%
! CAAATTCCATCCTTTAAGAA+AGG + chr8_2:60534597-60534616 None:intergenic 30.0%
CTTTCTTAAAGGATGGAATT+TGG - chr8_2:60534595-60534614 Msa1259100:intron 30.0%
!! TTTCAAAGTGGATTTTGAGA+AGG - chr8_2:60534685-60534704 Msa1259100:intron 30.0%
!!! TTCGATAGATTGGAGTTTTT+TGG - chr8_2:60534715-60534734 Msa1259100:intron 30.0%
AGTATGTCTATTCTTGTCAA+TGG - chr8_2:60534809-60534828 Msa1259100:intron 30.0%
CGCAACTAACAAAAAAAGAA+AGG + chr8_2:60534894-60534913 None:intergenic 30.0%
!! TTATTCGAGGGTTTTAGTAT+TGG - chr8_2:60534956-60534975 Msa1259100:intron 30.0%
! TTCTCTAAAAGCTCTCTTAT+TGG - chr8_2:60535115-60535134 Msa1259100:intron 30.0%
TAGTATACCGTTCAAGTATT+TGG - chr8_2:60535198-60535217 Msa1259100:intron 30.0%
AGTATACCGTTCAAGTATTT+GGG - chr8_2:60535199-60535218 Msa1259100:intron 30.0%
TGAGTGGTAAATTGAATTCA+TGG - chr8_2:60535285-60535304 Msa1259100:intron 30.0%
GAGTGGTAAATTGAATTCAT+GGG - chr8_2:60535286-60535305 Msa1259100:intron 30.0%
AGTGGTAAATTGAATTCATG+GGG - chr8_2:60535287-60535306 Msa1259100:intron 30.0%
ACTTGGGATTAAAGATTTGT+GGG - chr8_2:60535524-60535543 Msa1259100:intron 30.0%
GAAGTCCTTGAAGAAAAATA+TGG - chr8_2:60535615-60535634 Msa1259100:intron 30.0%
! TGGAAAAATTTGGTGAAACT+AGG - chr8_2:60535702-60535721 Msa1259100:intron 30.0%
! GGAAAAATTTGGTGAAACTA+GGG - chr8_2:60535703-60535722 Msa1259100:intron 30.0%
! GAAAAATTTGGTGAAACTAG+GGG - chr8_2:60535704-60535723 Msa1259100:intron 30.0%
!! GGATAATGTGGAATTTTAGT+TGG - chr8_2:60535913-60535932 Msa1259100:intron 30.0%
GACAAGAATTCTTACGATAT+TGG - chr8_2:60536345-60536364 Msa1259100:intron 30.0%
AGAATGAGGATGTAAAGATA+CGG - chr8_2:60536605-60536624 Msa1259100:intron 30.0%
TGTGATGAAGTTAATCAAAG+AGG + chr8_2:60536854-60536873 None:intergenic 30.0%
GAAACTTAATTCAAGATAGC+AGG + chr8_2:60536997-60537016 None:intergenic 30.0%
!! AGGCTATATTTTTATGTTCC+AGG - chr8_2:60537060-60537079 Msa1259100:intron 30.0%
!! GGCTATATTTTTATGTTCCA+GGG - chr8_2:60537061-60537080 Msa1259100:intron 30.0%
GATACAATTCTTTCTTTGGT+TGG + chr8_2:60537118-60537137 None:intergenic 30.0%
TGCAAGATAGAATCACATTA+CGG + chr8_2:60537371-60537390 None:intergenic 30.0%
!! CTTTAAAGCCTCATAAAATC+AGG + chr8_2:60537451-60537470 None:intergenic 30.0%
TATATTCGAAACTACAGGAA+AGG + chr8_2:60537651-60537670 None:intergenic 30.0%
AGGCTAAGCAAAGAATTAGA+AGG - chr8_2:60532450-60532469 Msa1259100:three_prime_UTR 35.0%
GAAGAAAAATTCAGTGGCTT+CGG - chr8_2:60532472-60532491 Msa1259100:three_prime_UTR 35.0%
!! CTCAGGAGTTAGTCTTATTA+GGG - chr8_2:60532707-60532726 Msa1259100:exon 35.0%
TATTAGGGATAATCAAGTGG+AGG - chr8_2:60532722-60532741 Msa1259100:CDS 35.0%
!! TTCGTATGCAAAGGTTTTAG+CGG - chr8_2:60532785-60532804 Msa1259100:CDS 35.0%
TTTAGCGGCCAAAAAAGAAT+TGG - chr8_2:60532800-60532819 Msa1259100:CDS 35.0%
!! TTGGTGTTACAAAAGGAAGT+AGG - chr8_2:60532819-60532838 Msa1259100:CDS 35.0%
AGATGTAGCAGTGAAACTTA+AGG - chr8_2:60532896-60532915 Msa1259100:intron 35.0%
TTAAAGGTCGTCACAATCAT+TGG + chr8_2:60532947-60532966 None:intergenic 35.0%
GTGACGACCTTTAATATAAG+GGG - chr8_2:60532953-60532972 Msa1259100:intron 35.0%
ACCTTTAATATAAGGGGTCT+TGG - chr8_2:60532959-60532978 Msa1259100:intron 35.0%
CCTTTAATATAAGGGGTCTT+GGG - chr8_2:60532960-60532979 Msa1259100:intron 35.0%
CTTTAATATAAGGGGTCTTG+GGG - chr8_2:60532961-60532980 Msa1259100:intron 35.0%
TTTAATATAAGGGGTCTTGG+GGG - chr8_2:60532962-60532981 Msa1259100:intron 35.0%
TTTGGTGAGACAAAATAAGG+TGG - chr8_2:60533012-60533031 Msa1259100:intron 35.0%
ACAAAGAGTAACACAAAGCT+GGG + chr8_2:60533078-60533097 None:intergenic 35.0%
! AGCTTTGTGTTACTCTTTGT+GGG - chr8_2:60533078-60533097 Msa1259100:intron 35.0%
! GTGGTGGAATTCTTTCAATA+TGG - chr8_2:60533146-60533165 Msa1259100:intron 35.0%
TCAAGGAAATGGTTATGTAG+GGG - chr8_2:60533201-60533220 Msa1259100:intron 35.0%
! ATCATCCCACATTCTTTTCT+TGG + chr8_2:60533299-60533318 None:intergenic 35.0%
AAGAATGTGGGATGATATTG+TGG - chr8_2:60533303-60533322 Msa1259100:intron 35.0%
!!! CGTTTTAGGGGATTTTAATG+CGG - chr8_2:60533359-60533378 Msa1259100:intron 35.0%
! GTTGGAGGATTTGAATGTTT+TGG - chr8_2:60533479-60533498 Msa1259100:intron 35.0%
! TGGAGGATTTGAATGTTTTG+GGG - chr8_2:60533481-60533500 Msa1259100:intron 35.0%
TTTACATGGTATCATGCGAA+TGG - chr8_2:60533510-60533529 Msa1259100:intron 35.0%
GATCGATGAGTAGAATTGAT+AGG - chr8_2:60533535-60533554 Msa1259100:intron 35.0%
!! AAGAAAAGTTGAAGGTGCTA+AGG - chr8_2:60533787-60533806 Msa1259100:intron 35.0%
TAAGGAATAGGATCAAAGAG+TGG - chr8_2:60533805-60533824 Msa1259100:intron 35.0%
TAAGGACCTTGATGAAAAAG+GGG - chr8_2:60533884-60533903 Msa1259100:intron 35.0%
CCTCCATAAATCATCAAACT+TGG + chr8_2:60533952-60533971 None:intergenic 35.0%
! CCAAGTTTGATGATTTATGG+AGG - chr8_2:60533949-60533968 Msa1259100:intron 35.0%
TTTAAAGGCCAAAGATGCTT+TGG - chr8_2:60533974-60533993 Msa1259100:intron 35.0%
ATCTAGTACGAATGCTATCA+AGG - chr8_2:60534071-60534090 Msa1259100:intron 35.0%
TCAATTTCGAGCATAGAGAA+AGG + chr8_2:60534261-60534280 None:intergenic 35.0%
! TCTGTTGTTTGTGATAGTGA+TGG - chr8_2:60534282-60534301 Msa1259100:intron 35.0%
! TAGCATGTTGGCATATTTTG+TGG - chr8_2:60534425-60534444 Msa1259100:intron 35.0%
TATAATCCCTTAACTCCAAC+GGG + chr8_2:60534473-60534492 None:intergenic 35.0%
AGACTACCAAGCAAAGAAAT+AGG + chr8_2:60534498-60534517 None:intergenic 35.0%
! TAAGCTTTCATCTAAGGTGT+TGG - chr8_2:60534521-60534540 Msa1259100:intron 35.0%
TCTCAATCGACCTTTCTTAA+AGG - chr8_2:60534584-60534603 Msa1259100:intron 35.0%
AATCGACCTTTCTTAAAGGA+TGG - chr8_2:60534588-60534607 Msa1259100:intron 35.0%
TCTTAAAGGATGGAATTTGG+TGG - chr8_2:60534598-60534617 Msa1259100:intron 35.0%
!! AGTGTTGGTGGTTAATGAAT+TGG - chr8_2:60534625-60534644 Msa1259100:intron 35.0%
AGGCTTATGATTCGATAGAT+TGG - chr8_2:60534705-60534724 Msa1259100:intron 35.0%
GGATACTAATTTCCTCCATT+GGG + chr8_2:60534838-60534857 None:intergenic 35.0%
TGGATACTAATTTCCTCCAT+TGG + chr8_2:60534839-60534858 None:intergenic 35.0%
AAAAAAGAAAGGGAGCTAGA+GGG + chr8_2:60534883-60534902 None:intergenic 35.0%
AAAAAAAGAAAGGGAGCTAG+AGG + chr8_2:60534884-60534903 None:intergenic 35.0%
!!! CTTTTTTTGTTAGTTGCGGA+AGG - chr8_2:60534896-60534915 Msa1259100:intron 35.0%
!!! AAGGTTTTAGTGGGTTAATG+AGG - chr8_2:60534915-60534934 Msa1259100:intron 35.0%
CCCAATACAAAGTGTATCAT+CGG + chr8_2:60535017-60535036 None:intergenic 35.0%
CCGATGATACACTTTGTATT+GGG - chr8_2:60535014-60535033 Msa1259100:intron 35.0%
! ACTTTGTATTGGGAAAGCAT+CGG - chr8_2:60535024-60535043 Msa1259100:intron 35.0%
GGATAATCTTTGGATGATGA+AGG - chr8_2:60535048-60535067 Msa1259100:intron 35.0%
TCTTATTGGAGTTAATGTCC+CGG - chr8_2:60535129-60535148 Msa1259100:intron 35.0%
GTATACCGTTCAAGTATTTG+GGG - chr8_2:60535200-60535219 Msa1259100:intron 35.0%
CCACTCAAACTTTCTAACAA+CGG + chr8_2:60535272-60535291 None:intergenic 35.0%
GTGTGTCAAAGTAAGCAAAT+GGG - chr8_2:60535498-60535517 Msa1259100:intron 35.0%
GACTTGGGATTAAAGATTTG+TGG - chr8_2:60535523-60535542 Msa1259100:intron 35.0%
! GGTAATGAATGTGTGTCTTT+TGG - chr8_2:60535545-60535564 Msa1259100:intron 35.0%
! AAGGGCCATATTTTTCTTCA+AGG + chr8_2:60535623-60535642 None:intergenic 35.0%
AGAAAAATATGGCCCTTGTA+AGG - chr8_2:60535626-60535645 Msa1259100:intron 35.0%
! CAAATTTTTCCACCAAACAG+AGG + chr8_2:60535694-60535713 None:intergenic 35.0%
! CTCTGTTTGGTGGAAAAATT+TGG - chr8_2:60535692-60535711 Msa1259100:intron 35.0%
! TAACGGAGAAATTTTGCGTA+AGG - chr8_2:60535749-60535768 Msa1259100:intron 35.0%
! ATGCCTTGAATACGAGTTTT+TGG - chr8_2:60535778-60535797 Msa1259100:intron 35.0%
CTTCCAAAAACTCGTATTCA+AGG + chr8_2:60535784-60535803 None:intergenic 35.0%
!! CTTGAATACGAGTTTTTGGA+AGG - chr8_2:60535782-60535801 Msa1259100:intron 35.0%
AGTTGGAACCTAGAAGATAA+GGG - chr8_2:60536029-60536048 Msa1259100:intron 35.0%
AGTAACAACCCTTATCTTCT+AGG + chr8_2:60536040-60536059 None:intergenic 35.0%
AGAAGATAAGGGTTGTTACT+CGG - chr8_2:60536040-60536059 Msa1259100:intron 35.0%
! GGTAAAATCGGCTTATTTGA+AGG - chr8_2:60536061-60536080 Msa1259100:intron 35.0%
! AAAATCGGCTTATTTGAAGG+TGG - chr8_2:60536064-60536083 Msa1259100:intron 35.0%
!! AGAGAGTGTTTGAGATTATG+TGG - chr8_2:60536129-60536148 Msa1259100:intron 35.0%
!! GAGAGTGTTTGAGATTATGT+GGG - chr8_2:60536130-60536149 Msa1259100:intron 35.0%
! AATTTTTCCGAACAAGGTGA+GGG - chr8_2:60536374-60536393 Msa1259100:intron 35.0%
CAAGCTATACTAAGAGTAAG+AGG + chr8_2:60536817-60536836 None:intergenic 35.0%
TGACCTTCAAGCAAAGTAAT+GGG - chr8_2:60536908-60536927 Msa1259100:intron 35.0%
TTTATGTTCCAGGGATATGT+TGG - chr8_2:60537070-60537089 Msa1259100:intron 35.0%
TTATGTTCCAGGGATATGTT+GGG - chr8_2:60537071-60537090 Msa1259100:intron 35.0%
TTTCTTTGGTTGGACCATAA+GGG + chr8_2:60537108-60537127 None:intergenic 35.0%
! GGAAAAAGCCTGATTTTATG+AGG - chr8_2:60537440-60537459 Msa1259100:CDS 35.0%
! TTTAAAGTGTCTCATCTGTC+TGG - chr8_2:60537464-60537483 Msa1259100:CDS 35.0%
! TAACAGTCTAAAACAATCCC+AGG + chr8_2:60537504-60537523 None:intergenic 35.0%
TGCCTTTACTGTAGTTTCTA+AGG - chr8_2:60537571-60537590 Msa1259100:intron 35.0%
AGCCTTAGAAACTACAGTAA+AGG + chr8_2:60537576-60537595 None:intergenic 35.0%
GCGGAGGAGTTAAACAAAAT+AGG - chr8_2:60532339-60532358 Msa1259100:three_prime_UTR 40.0%
!! ATGCTGTTGCTGATTTAGCT+GGG - chr8_2:60532408-60532427 Msa1259100:three_prime_UTR 40.0%
AGTGGAGTTTGTATCAGAAG+AGG - chr8_2:60532505-60532524 Msa1259100:three_prime_UTR 40.0%
GTGGAGTTTGTATCAGAAGA+GGG - chr8_2:60532506-60532525 Msa1259100:three_prime_UTR 40.0%
GTTTGTATCAGAAGAGGGTT+TGG - chr8_2:60532511-60532530 Msa1259100:three_prime_UTR 40.0%
AAGGTAGTGTCTTTCCAAGA+GGG - chr8_2:60532589-60532608 Msa1259100:three_prime_UTR 40.0%
!! GCTCAGGAGTTAGTCTTATT+AGG - chr8_2:60532706-60532725 Msa1259100:exon 40.0%
! GGAAGTAGGTGTATCTTTTG+TGG - chr8_2:60532833-60532852 Msa1259100:CDS 40.0%
! AGTAGGTGTATCTTTTGTGG+AGG - chr8_2:60532836-60532855 Msa1259100:CDS 40.0%
! GTATCTTTTGTGGAGGATGA+TGG - chr8_2:60532843-60532862 Msa1259100:CDS 40.0%
CTTAAGGAAGATATGGAGCA+TGG - chr8_2:60532912-60532931 Msa1259100:intron 40.0%
CCCAAGACCCCTTATATTAA+AGG + chr8_2:60532963-60532982 None:intergenic 40.0%
TTAATATAAGGGGTCTTGGG+GGG - chr8_2:60532963-60532982 Msa1259100:intron 40.0%
CAAAGAGTAACACAAAGCTG+GGG + chr8_2:60533077-60533096 None:intergenic 40.0%
CACAAAGAGTAACACAAAGC+TGG + chr8_2:60533079-60533098 None:intergenic 40.0%
! CAGCTTTGTGTTACTCTTTG+TGG - chr8_2:60533077-60533096 Msa1259100:intron 40.0%
! GCTTTGTGTTACTCTTTGTG+GGG - chr8_2:60533079-60533098 Msa1259100:intron 40.0%
AATTCCACCACTATTTCCCA+CGG + chr8_2:60533137-60533156 None:intergenic 40.0%
TGTTGGCCAAGAAAAGAATG+TGG - chr8_2:60533290-60533309 Msa1259100:intron 40.0%
GTTGGCCAAGAAAAGAATGT+GGG - chr8_2:60533291-60533310 Msa1259100:intron 40.0%
AATGTGGGATGATATTGTGG+AGG - chr8_2:60533306-60533325 Msa1259100:intron 40.0%
!! ATTTTAATGCGGTGTGTAGG+AGG - chr8_2:60533370-60533389 Msa1259100:intron 40.0%
! TTTTAATGCGGTGTGTAGGA+GGG - chr8_2:60533371-60533390 Msa1259100:intron 40.0%
TATTAATGAAGCGGAGTTGG+AGG - chr8_2:60533464-60533483 Msa1259100:intron 40.0%
!!! TTTTGGGGCGTCAATTTACA+TGG - chr8_2:60533496-60533515 Msa1259100:intron 40.0%
! TGATAGGGTTCTTATTTCGG+AGG - chr8_2:60533551-60533570 Msa1259100:intron 40.0%
! GATAGGGTTCTTATTTCGGA+GGG - chr8_2:60533552-60533571 Msa1259100:intron 40.0%
! ATAGGGTTCTTATTTCGGAG+GGG - chr8_2:60533553-60533572 Msa1259100:intron 40.0%
GTGGGGGAAAAATTCTCTTT+AGG - chr8_2:60533587-60533606 Msa1259100:intron 40.0%
ATTCTCTTTAGGTACTCCAG+AGG - chr8_2:60533598-60533617 Msa1259100:intron 40.0%
TTCTCTTTAGGTACTCCAGA+GGG - chr8_2:60533599-60533618 Msa1259100:intron 40.0%
TAATACCACCGGACAATGAT+CGG + chr8_2:60533631-60533650 None:intergenic 40.0%
TGTCCGGTGGTATTAAAAGA+TGG - chr8_2:60533636-60533655 Msa1259100:intron 40.0%
! CCTCCATCTTTTAATACCAC+CGG + chr8_2:60533642-60533661 None:intergenic 40.0%
CGGTGGTATTAAAAGATGGA+GGG - chr8_2:60533640-60533659 Msa1259100:intron 40.0%
TGGTATTAAAAGATGGAGGG+TGG - chr8_2:60533643-60533662 Msa1259100:intron 40.0%
GGTATTAAAAGATGGAGGGT+GGG - chr8_2:60533644-60533663 Msa1259100:intron 40.0%
!! TCAGAATTTTAAAGGGGTGG+TGG - chr8_2:60533713-60533732 Msa1259100:intron 40.0%
!! AGTTGAAGGTGCTAAGGAAT+AGG - chr8_2:60533793-60533812 Msa1259100:intron 40.0%
GATCAAAGAGTGGAACAAAG+AGG - chr8_2:60533815-60533834 Msa1259100:intron 40.0%
! TGGAACAAAGAGGAGTATAG+AGG - chr8_2:60533825-60533844 Msa1259100:intron 40.0%
! CAAAGAGGAGTATAGAGGTA+TGG - chr8_2:60533830-60533849 Msa1259100:intron 40.0%
! AGTATAGAGGTATGGAGGAA+AGG - chr8_2:60533838-60533857 Msa1259100:intron 40.0%
! GTATAGAGGTATGGAGGAAA+GGG - chr8_2:60533839-60533858 Msa1259100:intron 40.0%
GTGATGTGGAGGTAAATATG+CGG - chr8_2:60533922-60533941 Msa1259100:intron 40.0%
! GAATGCTATCAAGGCTCTAA+GGG - chr8_2:60534080-60534099 Msa1259100:intron 40.0%
TCTAAGGGAGAATGAAGGAT+GGG - chr8_2:60534095-60534114 Msa1259100:intron 40.0%
TGTCTCCTACGGAAGTTAAA+GGG - chr8_2:60534121-60534140 Msa1259100:intron 40.0%
AAATTCACACCATCCAACCT+CGG + chr8_2:60534198-60534217 None:intergenic 40.0%
!! GAATTTTGAGAGACTTTCCG+AGG - chr8_2:60534212-60534231 Msa1259100:intron 40.0%
AGTGATGGTAATAAAAGCCC+TGG - chr8_2:60534297-60534316 Msa1259100:intron 40.0%
GTGATGGTAATAAAAGCCCT+GGG - chr8_2:60534298-60534317 Msa1259100:intron 40.0%
! TTTTGTGGCTCTTATCCCTA+AGG - chr8_2:60534440-60534459 Msa1259100:intron 40.0%
ATAATCCCTTAACTCCAACG+GGG + chr8_2:60534472-60534491 None:intergenic 40.0%
!! TTTCATCTAAGGTGTTGGCT+AGG - chr8_2:60534526-60534545 Msa1259100:intron 40.0%
! AAAGGATGGAATTTGGTGGA+TGG - chr8_2:60534602-60534621 Msa1259100:intron 40.0%
!! GTTGGTGGTTAATGAATTGG+TGG - chr8_2:60534628-60534647 Msa1259100:intron 40.0%
GGAATATATGATGAGGAGAG+CGG - chr8_2:60534736-60534755 Msa1259100:intron 40.0%
GAATATATGATGAGGAGAGC+GGG - chr8_2:60534737-60534756 Msa1259100:intron 40.0%
GAGGAAATTAGTATCCAACG+AGG - chr8_2:60534842-60534861 Msa1259100:intron 40.0%
ATCCAACGAGGTCTTAAACA+AGG - chr8_2:60534854-60534873 Msa1259100:intron 40.0%
TCCAACGAGGTCTTAAACAA+GGG - chr8_2:60534855-60534874 Msa1259100:intron 40.0%
!! TTAGTTGCGGAAGGTTTTAG+TGG - chr8_2:60534905-60534924 Msa1259100:intron 40.0%
!! TAGTTGCGGAAGGTTTTAGT+GGG - chr8_2:60534906-60534925 Msa1259100:intron 40.0%
!! TAGTGGGTTAATGAGGAAAG+CGG - chr8_2:60534922-60534941 Msa1259100:intron 40.0%
GTGGACTTGAACTTATTCGA+GGG - chr8_2:60534944-60534963 Msa1259100:intron 40.0%
!! TTCGAGGGTTTTAGTATTGG+TGG - chr8_2:60534959-60534978 Msa1259100:intron 40.0%
ATCATCGGCATATTGCAAGT+GGG + chr8_2:60535002-60535021 None:intergenic 40.0%
TATCATCGGCATATTGCAAG+TGG + chr8_2:60535003-60535022 None:intergenic 40.0%
GCCGATGATACACTTTGTAT+TGG - chr8_2:60535013-60535032 Msa1259100:intron 40.0%
!! AAGCATCGGTGGATAATCTT+TGG - chr8_2:60535038-60535057 Msa1259100:intron 40.0%
!!! ACGAGGTTTTGAGATGACAT+CGG - chr8_2:60535078-60535097 Msa1259100:intron 40.0%
CTTATTGGAGTTAATGTCCC+GGG - chr8_2:60535130-60535149 Msa1259100:intron 40.0%
TTATTGGAGTTAATGTCCCG+GGG - chr8_2:60535131-60535150 Msa1259100:intron 40.0%
GGTAACCCCAAATACTTGAA+CGG + chr8_2:60535208-60535227 None:intergenic 40.0%
! GTTCAAGTATTTGGGGTTAC+CGG - chr8_2:60535207-60535226 Msa1259100:intron 40.0%
! ATCCGAAGAGTATGTCAACT+TGG - chr8_2:60535243-60535262 Msa1259100:intron 40.0%
! TCCGAAGAGTATGTCAACTT+GGG - chr8_2:60535244-60535263 Msa1259100:intron 40.0%
! TCCCAAGTTGACATACTCTT+CGG + chr8_2:60535248-60535267 None:intergenic 40.0%
CCGTTGTTAGAAAGTTTGAG+TGG - chr8_2:60535269-60535288 Msa1259100:intron 40.0%
!! TGAAAATGTCGGTTCAAGTG+TGG - chr8_2:60535391-60535410 Msa1259100:intron 40.0%
! AGGAGGGATGAAGATTAGTT+GGG - chr8_2:60535461-60535480 Msa1259100:intron 40.0%
! TGAAGATTAGTTGGGTGAAG+TGG - chr8_2:60535469-60535488 Msa1259100:intron 40.0%
TAGTTGGGTGAAGTGGAAAA+CGG - chr8_2:60535476-60535495 Msa1259100:intron 40.0%
GGTGTGTCAAAGTAAGCAAA+TGG - chr8_2:60535497-60535516 Msa1259100:intron 40.0%
TGTCAAAGTAAGCAAATGGG+AGG - chr8_2:60535501-60535520 Msa1259100:intron 40.0%
! ATGTGTGTCTTTTGGCAAAG+TGG - chr8_2:60535553-60535572 Msa1259100:intron 40.0%
! TTTTGGCAAAGTGGAGATGA+AGG - chr8_2:60535562-60535581 Msa1259100:intron 40.0%
! TGGAGATGAAGGCTTTTAAG+TGG - chr8_2:60535573-60535592 Msa1259100:intron 40.0%
!! GGAGATGAAGGCTTTTAAGT+GGG - chr8_2:60535574-60535593 Msa1259100:intron 40.0%
!! GAGATGAAGGCTTTTAAGTG+GGG - chr8_2:60535575-60535594 Msa1259100:intron 40.0%
!! AAGGCTTTTAAGTGGGGAAA+AGG - chr8_2:60535581-60535600 Msa1259100:intron 40.0%
CCAACAAACACTCCTTACAA+GGG + chr8_2:60535641-60535660 None:intergenic 40.0%
TCCAACAAACACTCCTTACA+AGG + chr8_2:60535642-60535661 None:intergenic 40.0%
!! TTGTAAGGAGTGTTTGTTGG+AGG - chr8_2:60535641-60535660 Msa1259100:intron 40.0%
! AAATTTGGTGAAACTAGGGG+AGG - chr8_2:60535707-60535726 Msa1259100:intron 40.0%
TTTCTCCGTTAAACCACCTT+TGG + chr8_2:60535740-60535759 None:intergenic 40.0%
! GGAGAAATTTTGCGTAAGGT+GGG - chr8_2:60535753-60535772 Msa1259100:intron 40.0%
!! CGAGTTTTTGGAAGGTAAAG+TGG - chr8_2:60535790-60535809 Msa1259100:intron 40.0%
!! TTTTGGAAGGTAAAGTGGTG+TGG - chr8_2:60535795-60535814 Msa1259100:intron 40.0%
AAATCAAAAGGAGGCTAACG+TGG - chr8_2:60535863-60535882 Msa1259100:intron 40.0%
AATCAAAAGGAGGCTAACGT+GGG - chr8_2:60535864-60535883 Msa1259100:intron 40.0%
GAGTTGGAACCTAGAAGATA+AGG - chr8_2:60536028-60536047 Msa1259100:intron 40.0%
GGGTTGTTACTCGGTAAAAT+CGG - chr8_2:60536049-60536068 Msa1259100:intron 40.0%
TGATGTTGAGAGAAAACCGA+TGG - chr8_2:60536093-60536112 Msa1259100:intron 40.0%
GATGTTGAGAGAAAACCGAT+GGG - chr8_2:60536094-60536113 Msa1259100:intron 40.0%
ATGTTGAGAGAAAACCGATG+GGG - chr8_2:60536095-60536114 Msa1259100:intron 40.0%
! TCTTTTCATCTTCTCCCCAT+CGG + chr8_2:60536112-60536131 None:intergenic 40.0%
! CAATTTTTCCGAACAAGGTG+AGG - chr8_2:60536373-60536392 Msa1259100:intron 40.0%
AGGGAAGAAGAGAAGATGAA+AGG - chr8_2:60536393-60536412 Msa1259100:intron 40.0%
GGTTCACAATTGATTGAGTG+TGG - chr8_2:60536414-60536433 Msa1259100:intron 40.0%
CTGACCTTCAAGCAAAGTAA+TGG - chr8_2:60536907-60536926 Msa1259100:intron 40.0%
AGTCCCATTACTTTGCTTGA+AGG + chr8_2:60536914-60536933 None:intergenic 40.0%
TAAGATAGCAGGACAATGTC+TGG + chr8_2:60536938-60536957 None:intergenic 40.0%
TATGTTCCAGGGATATGTTG+GGG - chr8_2:60537072-60537091 Msa1259100:intron 40.0%
CTTTCTTTGGTTGGACCATA+AGG + chr8_2:60537109-60537128 None:intergenic 40.0%
AGATAACTGACCAAGCTTGT+CGG + chr8_2:60537155-60537174 None:intergenic 40.0%
ATTGAAATGTGCAGGTGTGT+TGG - chr8_2:60537328-60537347 Msa1259100:CDS 40.0%
!! CATCTGTCTGGTCTTATCTT+TGG - chr8_2:60537476-60537495 Msa1259100:CDS 40.0%
!! TGGTCTTATCTTTGGTTCCT+GGG - chr8_2:60537484-60537503 Msa1259100:CDS 40.0%
!!! CTGTGTTTTTAGGTGTTGTG+TGG - chr8_2:60537538-60537557 Msa1259100:CDS 40.0%
! TTAGGTGTTGTGTGGAGTTA+TGG - chr8_2:60537546-60537565 Msa1259100:CDS 40.0%
AGGAAAGGCTTACAATGTAC+AGG + chr8_2:60537636-60537655 None:intergenic 40.0%
! AACATCAGTTTTTGTGGCGG+AGG - chr8_2:60532323-60532342 Msa1259100:three_prime_UTR 45.0%
!! GATGCTGTTGCTGATTTAGC+TGG - chr8_2:60532407-60532426 Msa1259100:three_prime_UTR 45.0%
TGTATCAGAAGAGGGTTTGG+AGG - chr8_2:60532514-60532533 Msa1259100:three_prime_UTR 45.0%
GTATCAGAAGAGGGTTTGGA+GGG - chr8_2:60532515-60532534 Msa1259100:three_prime_UTR 45.0%
CAGAAAAGGGGGAGAAGAAA+AGG - chr8_2:60532542-60532561 Msa1259100:three_prime_UTR 45.0%
ACCAAGTGAGCTCTTCACAT+AGG - chr8_2:60532566-60532585 Msa1259100:three_prime_UTR 45.0%
TCCTATGTGAAGAGCTCACT+TGG + chr8_2:60532570-60532589 None:intergenic 45.0%
AGTGAGCTCTTCACATAGGA+AGG - chr8_2:60532570-60532589 Msa1259100:three_prime_UTR 45.0%
GAAGGTAGTGTCTTTCCAAG+AGG - chr8_2:60532588-60532607 Msa1259100:three_prime_UTR 45.0%
AGGTAGTGTCTTTCCAAGAG+GGG - chr8_2:60532590-60532609 Msa1259100:three_prime_UTR 45.0%
GCAACTGCAGTTCTACAAAG+TGG - chr8_2:60532684-60532703 Msa1259100:three_prime_UTR 45.0%
TAGGGATAATCAAGTGGAGG+TGG - chr8_2:60532725-60532744 Msa1259100:CDS 45.0%
TAATCAAGTGGAGGTGGTGT+CGG - chr8_2:60532731-60532750 Msa1259100:CDS 45.0%
GGAAAGAGGTTCGTATGCAA+AGG - chr8_2:60532776-60532795 Msa1259100:CDS 45.0%
GGAAGATATGGAGCATGGAA+CGG - chr8_2:60532917-60532936 Msa1259100:intron 45.0%
GGGCAATGACGATTGTGATT+GGG - chr8_2:60533099-60533118 Msa1259100:intron 45.0%
! ATGTAGGGGTGTGTTTAGAG+TGG - chr8_2:60533215-60533234 Msa1259100:intron 45.0%
! TGTAGGGGTGTGTTTAGAGT+GGG - chr8_2:60533216-60533235 Msa1259100:intron 45.0%
CTTGGCCAACAATTCACACT+TGG + chr8_2:60533281-60533300 None:intergenic 45.0%
!! GGGATTTTAATGCGGTGTGT+AGG - chr8_2:60533367-60533386 Msa1259100:intron 45.0%
TGTGTAGGAGGGATGAAAGA+AGG - chr8_2:60533382-60533401 Msa1259100:intron 45.0%
GTGTAGGAGGGATGAAAGAA+GGG - chr8_2:60533383-60533402 Msa1259100:intron 45.0%
TGTAGGAGGGATGAAAGAAG+GGG - chr8_2:60533384-60533403 Msa1259100:intron 45.0%
AATGATCGGAAACATCCCTC+TGG + chr8_2:60533617-60533636 None:intergenic 45.0%
GGATGTTTCCGATCATTGTC+CGG - chr8_2:60533620-60533639 Msa1259100:intron 45.0%
CCGGTGGTATTAAAAGATGG+AGG - chr8_2:60533639-60533658 Msa1259100:intron 45.0%
TAAAAGATGGAGGGTGGGAT+TGG - chr8_2:60533649-60533668 Msa1259100:intron 45.0%
AAAAGATGGAGGGTGGGATT+GGG - chr8_2:60533650-60533669 Msa1259100:intron 45.0%
!! GAATTTTAAAGGGGTGGTGG+AGG - chr8_2:60533716-60533735 Msa1259100:intron 45.0%
! AGAGGAGTATAGAGGTATGG+AGG - chr8_2:60533833-60533852 Msa1259100:intron 45.0%
GGAGGAAAGGGTGGAAAATT+TGG - chr8_2:60533851-60533870 Msa1259100:intron 45.0%
GGAAAGGGTGGAAAATTTGG+TGG - chr8_2:60533854-60533873 Msa1259100:intron 45.0%
CTTGATGAAAAAGGGGAGGA+GGG - chr8_2:60533891-60533910 Msa1259100:intron 45.0%
! TTGCACGACCAAAGCATCTT+TGG + chr8_2:60533985-60534004 None:intergenic 45.0%
CTTTGGTCGTGCAAAGATCA+AGG - chr8_2:60533991-60534010 Msa1259100:intron 45.0%
TGCAAAGATCAAGGTCGAGA+TGG - chr8_2:60534000-60534019 Msa1259100:intron 45.0%
ATCAAGGTCGAGATGGTTGA+AGG - chr8_2:60534007-60534026 Msa1259100:intron 45.0%
CGAATGCTATCAAGGCTCTA+AGG - chr8_2:60534079-60534098 Msa1259100:intron 45.0%
!! AAGGCTCTAAGGGAGAATGA+AGG - chr8_2:60534090-60534109 Msa1259100:intron 45.0%
! CTCTAAGGGAGAATGAAGGA+TGG - chr8_2:60534094-60534113 Msa1259100:intron 45.0%
GTGTCTCCTACGGAAGTTAA+AGG - chr8_2:60534120-60534139 Msa1259100:intron 45.0%
TCCTACGGAAGTTAAAGGGA+AGG - chr8_2:60534125-60534144 Msa1259100:intron 45.0%
! ACCTTCCCTTTAACTTCCGT+AGG + chr8_2:60534129-60534148 None:intergenic 45.0%
GGAAGTTAAAGGGAAGGTAG+TGG - chr8_2:60534131-60534150 Msa1259100:intron 45.0%
TACAAGTAGCGGCTAGTACA+TGG - chr8_2:60534166-60534185 Msa1259100:intron 45.0%
ACAAGTAGCGGCTAGTACAT+GGG - chr8_2:60534167-60534186 Msa1259100:intron 45.0%
AATTAAATCCATCGGGCCCA+GGG + chr8_2:60534317-60534336 None:intergenic 45.0%
AAATTAAATCCATCGGGCCC+AGG + chr8_2:60534318-60534337 None:intergenic 45.0%
TTTCTTCCCCGTTGGAGTTA+AGG - chr8_2:60534463-60534482 Msa1259100:intron 45.0%
TTCTTCCCCGTTGGAGTTAA+GGG - chr8_2:60534464-60534483 Msa1259100:intron 45.0%
! GAATTTGGTGGATGGAGTGT+TGG - chr8_2:60534610-60534629 Msa1259100:intron 45.0%
TCTTGTCAATGGTAGCCCAA+TGG - chr8_2:60534820-60534839 Msa1259100:intron 45.0%
CCAACGAGGTCTTAAACAAG+GGG - chr8_2:60534856-60534875 Msa1259100:intron 45.0%
! GGTGGACTTGAACTTATTCG+AGG - chr8_2:60534943-60534962 Msa1259100:intron 45.0%
!! TTGTATTGGGAAAGCATCGG+TGG - chr8_2:60535027-60535046 Msa1259100:intron 45.0%
!!! ATGATGAAGGCGCTTTTACG+AGG - chr8_2:60535061-60535080 Msa1259100:intron 45.0%
!!! CGAGGTTTTGAGATGACATC+GGG - chr8_2:60535079-60535098 Msa1259100:intron 45.0%
TATTGGAGTTAATGTCCCGG+GGG - chr8_2:60535132-60535151 Msa1259100:intron 45.0%
TAATGTCCCGGGGGAATTTA+TGG - chr8_2:60535141-60535160 Msa1259100:intron 45.0%
! AAGTATTTGGGGTTACCGGT+GGG - chr8_2:60535211-60535230 Msa1259100:intron 45.0%
AGGTGCAACGAGAATTCCTT+TGG - chr8_2:60535427-60535446 Msa1259100:intron 45.0%
GGTGCAACGAGAATTCCTTT+GGG - chr8_2:60535428-60535447 Msa1259100:intron 45.0%
GTGCAACGAGAATTCCTTTG+GGG - chr8_2:60535429-60535448 Msa1259100:intron 45.0%
GAGGAGGGATGAAGATTAGT+TGG - chr8_2:60535460-60535479 Msa1259100:intron 45.0%
AGTAAGCAAATGGGAGGACT+TGG - chr8_2:60535507-60535526 Msa1259100:intron 45.0%
GTAAGCAAATGGGAGGACTT+GGG - chr8_2:60535508-60535527 Msa1259100:intron 45.0%
!! CCCTTGTAAGGAGTGTTTGT+TGG - chr8_2:60535638-60535657 Msa1259100:intron 45.0%
!! AAGGAGTGTTTGTTGGAGGA+AGG - chr8_2:60535645-60535664 Msa1259100:intron 45.0%
!! CACCAAACAGAGGTATTCCT+CGG + chr8_2:60535684-60535703 None:intergenic 45.0%
! CGGAGAAATTTTGCGTAAGG+TGG - chr8_2:60535752-60535771 Msa1259100:intron 45.0%
ATCAAAAGGAGGCTAACGTG+GGG - chr8_2:60535865-60535884 Msa1259100:intron 45.0%
TCTCAGAGGAAGGGATAATG+TGG - chr8_2:60535901-60535920 Msa1259100:intron 45.0%
! GAGAAGACGCCTTTTTGTGT+GGG - chr8_2:60535935-60535954 Msa1259100:intron 45.0%
!! TACTAGCCTTGTCGAGGATT+TGG - chr8_2:60535971-60535990 Msa1259100:intron 45.0%
AGTGACTCAATCGAATGAGG+AGG - chr8_2:60535998-60536017 Msa1259100:intron 45.0%
AATCGAATGAGGAGGATGTG+TGG - chr8_2:60536006-60536025 Msa1259100:intron 45.0%
TCGGCTTATTTGAAGGTGGA+AGG - chr8_2:60536068-60536087 Msa1259100:intron 45.0%
GCAAACGCAACCACTTTCAA+CGG + chr8_2:60536167-60536186 None:intergenic 45.0%
TGAAAGTGGTTGCGTTTGCT+TGG - chr8_2:60536168-60536187 Msa1259100:intron 45.0%
TCTTCTTCCCTCACCTTGTT+CGG + chr8_2:60536384-60536403 None:intergenic 45.0%
CTGTATCGAATGCCTCAAAG+AGG - chr8_2:60537173-60537192 Msa1259100:intron 45.0%
TATCGAATGCCTCAAAGAGG+CGG - chr8_2:60537176-60537195 Msa1259100:intron 45.0%
! CCTCTTAGTTAGCTTCCCTT+GGG + chr8_2:60537238-60537257 None:intergenic 45.0%
AAGGGAAGCTAACTAAGAGG+CGG - chr8_2:60537238-60537257 Msa1259100:CDS 45.0%
! GCGGATTGTGTAGAAAACGA+AGG - chr8_2:60537257-60537276 Msa1259100:CDS 45.0%
!! CAGGCTTTTTCCAAACTGCT+TGG + chr8_2:60537432-60537451 None:intergenic 45.0%
!! CTGGTCTTATCTTTGGTTCC+TGG - chr8_2:60537483-60537502 Msa1259100:CDS 45.0%
! TTAGGGGCAAAAGAAGGTGC+AGG - chr8_2:60532275-60532294 Msa1259100:three_prime_UTR 50.0%
GGCTTCGGCTAAACAACAAG+TGG - chr8_2:60532487-60532506 Msa1259100:three_prime_UTR 50.0%
TTTGGAGGGAGGGCAGAAAA+GGG - chr8_2:60532529-60532548 Msa1259100:three_prime_UTR 50.0%
!! GTCTTTCCAAGAGGGGTGTT+TGG - chr8_2:60532597-60532616 Msa1259100:three_prime_UTR 50.0%
GGTGTTTGGACGATGGAAGT+GGG - chr8_2:60532611-60532630 Msa1259100:three_prime_UTR 50.0%
GCAGTTCTACAAAGTGGCTC+AGG - chr8_2:60532690-60532709 Msa1259100:three_prime_UTR 50.0%
GGGGCAATGACGATTGTGAT+TGG - chr8_2:60533098-60533117 Msa1259100:intron 50.0%
TTGGGTGTTTAGACCTTCCG+TGG - chr8_2:60533117-60533136 Msa1259100:intron 50.0%
TGGGTGTTTAGACCTTCCGT+GGG - chr8_2:60533118-60533137 Msa1259100:intron 50.0%
AGACCTTCCGTGGGAAATAG+TGG - chr8_2:60533127-60533146 Msa1259100:intron 50.0%
! GTAGGGGTGTGTTTAGAGTG+GGG - chr8_2:60533217-60533236 Msa1259100:intron 50.0%
TTGTGGAGGAGCGAAGTAGT+AGG - chr8_2:60533320-60533339 Msa1259100:intron 50.0%
TGTGGAGGAGCGAAGTAGTA+GGG - chr8_2:60533321-60533340 Msa1259100:intron 50.0%
TGTTTCCGATCATTGTCCGG+TGG - chr8_2:60533623-60533642 Msa1259100:intron 50.0%
AAAGATGGAGGGTGGGATTG+GGG - chr8_2:60533651-60533670 Msa1259100:intron 50.0%
GAGGAAGCTTGGAGGAATCA+AGG - chr8_2:60533735-60533754 Msa1259100:intron 50.0%
TGGAGGAATCAAGGTGTGAG+TGG - chr8_2:60533744-60533763 Msa1259100:intron 50.0%
GGAATCAAGGTGTGAGTGGA+TGG - chr8_2:60533748-60533767 Msa1259100:intron 50.0%
! TAGAGGTATGGAGGAAAGGG+TGG - chr8_2:60533842-60533861 Msa1259100:intron 50.0%
GGACCTTGATGAAAAAGGGG+AGG - chr8_2:60533887-60533906 Msa1259100:intron 50.0%
!! CCTCCTCCCCTTTTTCATCA+AGG + chr8_2:60533893-60533912 None:intergenic 50.0%
CCTTGATGAAAAAGGGGAGG+AGG - chr8_2:60533890-60533909 Msa1259100:intron 50.0%
GGAGGGATTGCTTAGTGATG+TGG - chr8_2:60533908-60533927 Msa1259100:intron 50.0%
GGGATTGCTTAGTGATGTGG+AGG - chr8_2:60533911-60533930 Msa1259100:intron 50.0%
AAGGTCGAGATGGTTGAAGG+AGG - chr8_2:60534010-60534029 Msa1259100:intron 50.0%
AGGTCGAGATGGTTGAAGGA+GGG - chr8_2:60534011-60534030 Msa1259100:intron 50.0%
AAGGGAGAATGAAGGATGGG+TGG - chr8_2:60534098-60534117 Msa1259100:intron 50.0%
CCAACGGGGAAGAAACCTTA+GGG + chr8_2:60534458-60534477 None:intergenic 50.0%
TCCAACGGGGAAGAAACCTT+AGG + chr8_2:60534459-60534478 None:intergenic 50.0%
!! CATCTAAGGTGTTGGCTAGG+AGG - chr8_2:60534529-60534548 Msa1259100:intron 50.0%
! TGTTGGCTAGGAGGTTGACA+GGG - chr8_2:60534538-60534557 Msa1259100:intron 50.0%
!! TTTGGTGGATGGAGTGTTGG+TGG - chr8_2:60534613-60534632 Msa1259100:intron 50.0%
! TGGATGAAGGCGTGTGTGTT+TGG - chr8_2:60534782-60534801 Msa1259100:intron 50.0%
! ATGAAGGCGTGTGTGTTTGG+TGG - chr8_2:60534785-60534804 Msa1259100:intron 50.0%
TGTCAATGGTAGCCCAATGG+AGG - chr8_2:60534823-60534842 Msa1259100:intron 50.0%
! CCCCTTGTTTAAGACCTCGT+TGG + chr8_2:60534859-60534878 None:intergenic 50.0%
TGGGTTAATGAGGAAAGCGG+TGG - chr8_2:60534925-60534944 Msa1259100:intron 50.0%
! CAAGTATTTGGGGTTACCGG+TGG - chr8_2:60535210-60535229 Msa1259100:intron 50.0%
!! TGTCGGTTCAAGTGTGGAAG+AGG - chr8_2:60535397-60535416 Msa1259100:intron 50.0%
GGTTCAAGTGTGGAAGAGGA+TGG - chr8_2:60535401-60535420 Msa1259100:intron 50.0%
AGTGTGGAAGAGGATGGTGA+AGG - chr8_2:60535407-60535426 Msa1259100:intron 50.0%
! CAACGAGAATTCCTTTGGGG+TGG - chr8_2:60535432-60535451 Msa1259100:intron 50.0%
!! TAAGTGGGGAAAAGGCGTTG+TGG - chr8_2:60535589-60535608 Msa1259100:intron 50.0%
!! TGGAGGAAGGTGCTACTTTG+TGG - chr8_2:60535658-60535677 Msa1259100:intron 50.0%
CGAGGAATACCTCTGTTTGG+TGG - chr8_2:60535682-60535701 Msa1259100:intron 50.0%
GTGAAACTAGGGGAGGTTGA+GGG - chr8_2:60535714-60535733 Msa1259100:intron 50.0%
GAGGGCCAAAGGTGGTTTAA+CGG - chr8_2:60535732-60535751 Msa1259100:intron 50.0%
TGGAAGGTAAAGTGGTGTGG+TGG - chr8_2:60535798-60535817 Msa1259100:intron 50.0%
AAGGTAAAGTGGTGTGGTGG+AGG - chr8_2:60535801-60535820 Msa1259100:intron 50.0%
! AGGTAAAGTGGTGTGGTGGA+GGG - chr8_2:60535802-60535821 Msa1259100:intron 50.0%
TCAAAAGGAGGCTAACGTGG+GGG - chr8_2:60535866-60535885 Msa1259100:intron 50.0%
! GGAGAAGACGCCTTTTTGTG+TGG - chr8_2:60535934-60535953 Msa1259100:intron 50.0%
! AAGACGCCTTTTTGTGTGGG+AGG - chr8_2:60535938-60535957 Msa1259100:intron 50.0%
ACGCTTCCTCCCACACAAAA+AGG + chr8_2:60535947-60535966 None:intergenic 50.0%
!! GTTGCTTACTAGCCTTGTCG+AGG - chr8_2:60535965-60535984 Msa1259100:intron 50.0%
!! TAGCCTTGTCGAGGATTTGG+AGG - chr8_2:60535974-60535993 Msa1259100:intron 50.0%
! AGCCTTGTCGAGGATTTGGA+GGG - chr8_2:60535975-60535994 Msa1259100:intron 50.0%
GGGAGTGACTCAATCGAATG+AGG - chr8_2:60535995-60536014 Msa1259100:intron 50.0%
ATGAGGAGGATGTGTGGAGT+TGG - chr8_2:60536012-60536031 Msa1259100:intron 50.0%
TAGTCCGACACCGTTGAAAG+TGG - chr8_2:60536154-60536173 Msa1259100:intron 50.0%
GCAACCACTTTCAACGGTGT+CGG + chr8_2:60536161-60536180 None:intergenic 50.0%
AAGTGGTTGCGTTTGCTTGG+AGG - chr8_2:60536171-60536190 Msa1259100:intron 50.0%
AGTGGTTGCGTTTGCTTGGA+GGG - chr8_2:60536172-60536191 Msa1259100:intron 50.0%
TCCAGGGATATGTTGGGGAA+TGG - chr8_2:60537077-60537096 Msa1259100:intron 50.0%
TCCATTCCCCAACATATCCC+TGG + chr8_2:60537081-60537100 None:intergenic 50.0%
!! GTAAGTAGCACCGACAAGCT+TGG - chr8_2:60537142-60537161 Msa1259100:intron 50.0%
TCGAAATCGTCCATCTCCCA+AGG - chr8_2:60537219-60537238 Msa1259100:CDS 50.0%
CGAAATCGTCCATCTCCCAA+GGG - chr8_2:60537220-60537239 Msa1259100:CDS 50.0%
! AGTTAGCTTCCCTTGGGAGA+TGG + chr8_2:60537232-60537251 None:intergenic 50.0%
CCCAAGGGAAGCTAACTAAG+AGG - chr8_2:60537235-60537254 Msa1259100:CDS 50.0%
! GCCTCTTAGTTAGCTTCCCT+TGG + chr8_2:60537239-60537258 None:intergenic 50.0%
AACGAAGGATCGTCAACGTC+AGG - chr8_2:60537272-60537291 Msa1259100:CDS 50.0%
AAGGATCGTCAACGTCAGGA+AGG - chr8_2:60537276-60537295 Msa1259100:CDS 50.0%
ATCGTCAACGTCAGGAAGGT+TGG - chr8_2:60537280-60537299 Msa1259100:CDS 50.0%
GAAATGTGCAGGTGTGTTGG+TGG - chr8_2:60537331-60537350 Msa1259100:CDS 50.0%
TTGTCGTGTGCCAAGCAGTT+TGG - chr8_2:60537419-60537438 Msa1259100:intron 50.0%
! GGGCAAAAGAAGGTGCAGGA+GGG - chr8_2:60532279-60532298 Msa1259100:three_prime_UTR 55.0%
TCAGAAGAGGGTTTGGAGGG+AGG - chr8_2:60532518-60532537 Msa1259100:three_prime_UTR 55.0%
CAGAAGAGGGTTTGGAGGGA+GGG - chr8_2:60532519-60532538 Msa1259100:three_prime_UTR 55.0%
GTTTGGAGGGAGGGCAGAAA+AGG - chr8_2:60532528-60532547 Msa1259100:three_prime_UTR 55.0%
TTGGAGGGAGGGCAGAAAAG+GGG - chr8_2:60532530-60532549 Msa1259100:three_prime_UTR 55.0%
CATCGTCCAAACACCCCTCT+TGG + chr8_2:60532606-60532625 None:intergenic 55.0%
!! CAAGAGGGGTGTTTGGACGA+TGG - chr8_2:60532604-60532623 Msa1259100:three_prime_UTR 55.0%
GGGTGTTTGGACGATGGAAG+TGG - chr8_2:60532610-60532629 Msa1259100:three_prime_UTR 55.0%
GGGAGTGATTGTCCAAGTCG+TGG - chr8_2:60532631-60532650 Msa1259100:three_prime_UTR 55.0%
ATATAAGGGGTCTTGGGGGG+AGG - chr8_2:60532966-60532985 Msa1259100:intron 55.0%
TATAAGGGGTCTTGGGGGGA+GGG - chr8_2:60532967-60532986 Msa1259100:intron 55.0%
CCACCACTATTTCCCACGGA+AGG + chr8_2:60533133-60533152 None:intergenic 55.0%
CCTTCCGTGGGAAATAGTGG+TGG - chr8_2:60533130-60533149 Msa1259100:intron 55.0%
! GGTGTGTTTAGAGTGGGGAG+TGG - chr8_2:60533222-60533241 Msa1259100:intron 55.0%
GTGGAGGAGCGAAGTAGTAG+GGG - chr8_2:60533322-60533341 Msa1259100:intron 55.0%
TGGAGGAGCGAAGTAGTAGG+GGG - chr8_2:60533323-60533342 Msa1259100:intron 55.0%
GAGCGAAGTAGTAGGGGGAA+GGG - chr8_2:60533328-60533347 Msa1259100:intron 55.0%
AGCGAAGTAGTAGGGGGAAG+GGG - chr8_2:60533329-60533348 Msa1259100:intron 55.0%
!! AAGGGGCGTGGTGCGTTTTA+GGG - chr8_2:60533346-60533365 Msa1259100:intron 55.0%
! GGGTTCTTATTTCGGAGGGG+TGG - chr8_2:60533556-60533575 Msa1259100:intron 55.0%
AAGATGGAGGGTGGGATTGG+GGG - chr8_2:60533652-60533671 Msa1259100:intron 55.0%
AGGATGGGTGGTGTCTCCTA+CGG - chr8_2:60534110-60534129 Msa1259100:intron 55.0%
CTAGTACATGGGAGAGACCG+AGG - chr8_2:60534178-60534197 Msa1259100:intron 55.0%
TACATGGGAGAGACCGAGGT+TGG - chr8_2:60534182-60534201 Msa1259100:intron 55.0%
AATAAAAGCCCTGGGCCCGA+TGG - chr8_2:60534306-60534325 Msa1259100:intron 55.0%
CCCTAAGGTTTCTTCCCCGT+TGG - chr8_2:60534455-60534474 Msa1259100:intron 55.0%
!! GTGTTGGCTAGGAGGTTGAC+AGG - chr8_2:60534537-60534556 Msa1259100:intron 55.0%
GTTGGCTAGGAGGTTGACAG+GGG - chr8_2:60534539-60534558 Msa1259100:intron 55.0%
! AGCGGGTTTGTGCGACAAGT+GGG - chr8_2:60534754-60534773 Msa1259100:intron 55.0%
! CAAGTGGGTGGCTTGGATGA+AGG - chr8_2:60534769-60534788 Msa1259100:intron 55.0%
CCATGGCCATAAATTCCCCC+GGG + chr8_2:60535150-60535169 None:intergenic 55.0%
GCCATGGCCATAAATTCCCC+CGG + chr8_2:60535151-60535170 None:intergenic 55.0%
! TCGGATTTGCTTGCACCCAC+CGG + chr8_2:60535229-60535248 None:intergenic 55.0%
!! TGGGGAAAAGGCGTTGTGGA+AGG - chr8_2:60535593-60535612 Msa1259100:intron 55.0%
!! AAGGTGCTACTTTGTGGCCG+AGG - chr8_2:60535664-60535683 Msa1259100:intron 55.0%
GGCCGAGGAATACCTCTGTT+TGG - chr8_2:60535679-60535698 Msa1259100:intron 55.0%
GGTGAAACTAGGGGAGGTTG+AGG - chr8_2:60535713-60535732 Msa1259100:intron 55.0%
AGGCTAACGTGGGGGAGTTA+GGG - chr8_2:60535874-60535893 Msa1259100:intron 55.0%
TAACGTGGGGGAGTTAGGGA+CGG - chr8_2:60535878-60535897 Msa1259100:intron 55.0%
TTAGGGACGGTCTCAGAGGA+AGG - chr8_2:60535891-60535910 Msa1259100:intron 55.0%
TAGGGACGGTCTCAGAGGAA+GGG - chr8_2:60535892-60535911 Msa1259100:intron 55.0%
CTCCCTCCAAATCCTCGACA+AGG + chr8_2:60535980-60535999 None:intergenic 55.0%
GGGGAATGGATGCACCCTTA+TGG - chr8_2:60537091-60537110 Msa1259100:intron 55.0%
ACCATCAAGCCGCCTCTTTG+AGG + chr8_2:60537188-60537207 None:intergenic 55.0%
GTCAACGTCAGGAAGGTTGG+TGG - chr8_2:60537283-60537302 Msa1259100:CDS 55.0%
!! AACGTCAGGAAGGTTGGTGG+TGG - chr8_2:60537286-60537305 Msa1259100:CDS 55.0%
!! ACGTCAGGAAGGTTGGTGGT+GGG - chr8_2:60537287-60537306 Msa1259100:CDS 55.0%
! GGGGCAAAAGAAGGTGCAGG+AGG - chr8_2:60532278-60532297 Msa1259100:three_prime_UTR 60.0%
TGGAGGGAGGGCAGAAAAGG+GGG - chr8_2:60532531-60532550 Msa1259100:three_prime_UTR 60.0%
TGTCCAAGTCGTGGAGTGCG+AGG - chr8_2:60532640-60532659 Msa1259100:three_prime_UTR 60.0%
CAAGTCGTGGAGTGCGAGGA+GGG - chr8_2:60532644-60532663 Msa1259100:three_prime_UTR 60.0%
AAGTCGTGGAGTGCGAGGAG+GGG - chr8_2:60532645-60532664 Msa1259100:three_prime_UTR 60.0%
GGAGCGAAGTAGTAGGGGGA+AGG - chr8_2:60533327-60533346 Msa1259100:intron 60.0%
!! GAAGGGGCGTGGTGCGTTTT+AGG - chr8_2:60533345-60533364 Msa1259100:intron 60.0%
!! AGGGGCGTGGTGCGTTTTAG+GGG - chr8_2:60533347-60533366 Msa1259100:intron 60.0%
! GGAGGGGTGGTTTCGAGTGT+GGG - chr8_2:60533569-60533588 Msa1259100:intron 60.0%
! GAGGGGTGGTTTCGAGTGTG+GGG - chr8_2:60533570-60533589 Msa1259100:intron 60.0%
! AGGGGTGGTTTCGAGTGTGG+GGG - chr8_2:60533571-60533590 Msa1259100:intron 60.0%
!! AAGGGGTGGTGGAGGAAGCT+TGG - chr8_2:60533724-60533743 Msa1259100:intron 60.0%
TGGGAGAGACCGAGGTTGGA+TGG - chr8_2:60534186-60534205 Msa1259100:intron 60.0%
! GAGCGGGTTTGTGCGACAAG+TGG - chr8_2:60534753-60534772 Msa1259100:intron 60.0%
GGGTTTGTGCGACAAGTGGG+TGG - chr8_2:60534757-60534776 Msa1259100:intron 60.0%
TGTGCGACAAGTGGGTGGCT+TGG - chr8_2:60534762-60534781 Msa1259100:intron 60.0%
CCCGGGGGAATTTATGGCCA+TGG - chr8_2:60535147-60535166 Msa1259100:intron 60.0%
!! TTCCTTTGGGGTGGTGTGCG+AGG - chr8_2:60535441-60535460 Msa1259100:intron 60.0%
! TTTGGGGTGGTGTGCGAGGA+GGG - chr8_2:60535445-60535464 Msa1259100:intron 60.0%
TAGGGGAGGTTGAGGGCCAA+AGG - chr8_2:60535721-60535740 Msa1259100:intron 60.0%
GAGGCTAACGTGGGGGAGTT+AGG - chr8_2:60535873-60535892 Msa1259100:intron 60.0%
GGAGTTAGGGACGGTCTCAG+AGG - chr8_2:60535887-60535906 Msa1259100:intron 60.0%
GCCTCAAAGAGGCGGCTTGA+TGG - chr8_2:60537184-60537203 Msa1259100:CDS 60.0%
!! CGTCAGGAAGGTTGGTGGTG+GGG - chr8_2:60537288-60537307 Msa1259100:CDS 60.0%
CCTCCTCGCACTCCACGACT+TGG + chr8_2:60532646-60532665 None:intergenic 65.0%
CCAAGTCGTGGAGTGCGAGG+AGG - chr8_2:60532643-60532662 Msa1259100:three_prime_UTR 65.0%
AGTCGTGGAGTGCGAGGAGG+GGG - chr8_2:60532646-60532665 Msa1259100:three_prime_UTR 65.0%
AGTAGTAGGGGGAAGGGGCG+TGG - chr8_2:60533334-60533353 Msa1259100:intron 65.0%
! CGGAGGGGTGGTTTCGAGTG+TGG - chr8_2:60533568-60533587 Msa1259100:intron 65.0%
!! GGGTGGTGGAGGAAGCTTGG+AGG - chr8_2:60533727-60533746 Msa1259100:intron 65.0%
CTCCTCGCACACCACCCCAA+AGG + chr8_2:60535446-60535465 None:intergenic 65.0%
!! CTTTGGGGTGGTGTGCGAGG+AGG - chr8_2:60535444-60535463 Msa1259100:intron 65.0%
GGGAGGTTGAGGGCCAAAGG+TGG - chr8_2:60535724-60535743 Msa1259100:intron 65.0%
GTCGTGGAGTGCGAGGAGGG+GGG - chr8_2:60532647-60532666 Msa1259100:three_prime_UTR 70.0%
TCGTGGAGTGCGAGGAGGGG+GGG - chr8_2:60532648-60532667 Msa1259100:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 60532271 60537696 60532271 ID=Msa1259100;Name=Msa1259100
chr8_2 mRNA 60532271 60537696 60532271 ID=Msa1259100-mRNA-1;Parent=Msa1259100;Name=Msa1259100-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0.25|0.25|1|1|4|447|212
chr8_2 exon 60532271 60532885 60532271 ID=Msa1259100-mRNA-1:exon:18971;Parent=Msa1259100-mRNA-1
chr8_2 exon 60537184 60537431 60537184 ID=Msa1259100-mRNA-1:exon:18970;Parent=Msa1259100-mRNA-1
chr8_2 exon 60537440 60537586 60537440 ID=Msa1259100-mRNA-1:exon:18969;Parent=Msa1259100-mRNA-1
chr8_2 exon 60537621 60537696 60537621 ID=Msa1259100-mRNA-1:exon:18968;Parent=Msa1259100-mRNA-1
chr8_2 CDS 60537621 60537696 60537621 ID=Msa1259100-mRNA-1:cds;Parent=Msa1259100-mRNA-1
chr8_2 CDS 60537440 60537586 60537440 ID=Msa1259100-mRNA-1:cds;Parent=Msa1259100-mRNA-1
chr8_2 CDS 60537184 60537431 60537184 ID=Msa1259100-mRNA-1:cds;Parent=Msa1259100-mRNA-1
chr8_2 CDS 60532718 60532885 60532718 ID=Msa1259100-mRNA-1:cds;Parent=Msa1259100-mRNA-1
chr8_2 three_prime_UTR 60532271 60532717 60532271 ID=Msa1259100-mRNA-1:three_prime_utr;Parent=Msa1259100-mRNA-1
Gene Sequence

>Msa1259100

ATGTTTAGGGGCAAAAGAAGGTGCAGGAGGGTGCAAGTAGTAGTTGCCTTAAAACATCAGTTTTTGTGGCGGAGGAAAGAGTCTGATTTGTCTGAGTTTAGTGATGCTGTTGCTGATTTAGCTGGGAATGAACATCAAATTTTGAAGGCTAAGCAAAGAATTAGAAGGAAGAAAAATTCAGTGGCTTCGGCTAAACAACAAGTGGAGTTTGTATCAGAAGAGGGGAGGGCAGAAAAGGGGGAGAAGAAAAGGCACCAAGTGAGCTCTTCACATAGGAAGGTAGTGTCTTTCCAAGAGGGGTGTTTGGACGATGGAAGTGGGAGTGATTGTCCAAGTCGTGGAGTGCGAGGAGGGGGGGTAAGTCTCGATCAGCAACTGCAGTTCTACAAAGTGGCTCAGGAGTTAGTCTTATTAGGGATAATCAAGTGGAGGTGGTGTCGGAAACTCAATTTCTTAATCAAACGGAAAGAGGGATATGTTGGGGAATGGATGCACCCTTATGGTCCAACCAAAGAAAGAATTGTATCAAATGTAAGTAGCACCGACAAGCTTGGTCAGTTATCTGTATCGAATGCCTCAAAGAGGCGGCTTGATGGTTATGAAAGATGTCGAAATCGTCCATCTCCCAAGGGAAGCTAA
Protein sequence

>Msa1259100

MFRGKRRCRRVQVVVALKHQFLWRRKESDLSEFSDAVADLAGNEHQILKAKQRIRRKKNSVASAKQQVEFVSEEGRAEKGEKKRHQVSSSHRKVVSFQEGCLDDGSGSDCPSRGVRGGGVSLDQQLQFYKVAQELVLLGIIKWRWCRKLNFLIKRKEGYVGEWMHPYGPTKERIVSNVSSTDKLGQLSVSNASKRRLDGYERCRNRPSPKGS*