Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260780 | AFK47808.1 | 96.833 | 221 | 4 | 2 | 1 | 219 | 20 | 239 | 8.05e-152 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260780 | sp|Q84J78|SSBP_ARATH | 36.486 | 148 | 81 | 4 | 64 | 202 | 43 | 186 | 4.73e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260780 | I3T5L6 | 96.833 | 221 | 4 | 2 | 1 | 219 | 20 | 239 | 3.84e-152 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1260780 | Msa1331510 | 0.908305 | 1.975908e-81 | -8.615850e-47 |
| Msa1260780 | Msa1433590 | 0.805965 | 1.034483e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260780 | MtrunA17_Chr4g0062401 | 96.833 | 221 | 4 | 2 | 1 | 219 | 20 | 239 | 9.02e-156 | 431 |
| Msa1260780 | MtrunA17_Chr1g0192461 | 33.523 | 176 | 100 | 5 | 40 | 202 | 26 | 197 | 2.22e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260780 | AT3G18580.1 | 56.502 | 223 | 81 | 4 | 7 | 219 | 1 | 217 | 2.00e-80 | 239 |
| Msa1260780 | AT4G11060.1 | 36.486 | 148 | 81 | 4 | 64 | 202 | 43 | 186 | 4.81e-26 | 100 |
Find 74 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCGATCCCGGCGTTTAC+AGG | 0.255108 | 8_2:+62827171 | Msa1260780:CDS |
| ATCAACTTTCTTGCGTGTTA+TGG | 0.306546 | 8_2:+62830842 | Msa1260780:three_prime_UTR |
| TTTATTCTGTAATTATATTC+TGG | 0.330586 | 8_2:+62830717 | Msa1260780:three_prime_UTR |
| TTTGTTTGTATAGGCGATTT+TGG | 0.333461 | 8_2:+62827260 | Msa1260780:intron |
| TACTGTTTATCCAGAGAGAT+TGG | 0.333815 | 8_2:+62827446 | Msa1260780:CDS |
| GAATGTTCTTTCGGTTTGTT+CGG | 0.334526 | 8_2:-62827126 | None:intergenic |
| GAAGTTGCTGTTCGTCGAAA+TGG | 0.345840 | 8_2:+62827579 | Msa1260780:CDS |
| CGGTGGTGGTGTAGAGGCGG+AGG | 0.360591 | 8_2:-62827017 | None:intergenic |
| AATGTTCTTTCGGTTTGTTC+GGG | 0.370708 | 8_2:-62827125 | None:intergenic |
| GTGGTTACTCTGCTTTCAAT+TGG | 0.375327 | 8_2:+62827333 | Msa1260780:CDS |
| TGAAAAGCAAAGAGCGATAG+AGG | 0.376251 | 8_2:-62826989 | None:intergenic |
| CGCAGAATGCAGAACTCAAT+TGG | 0.378364 | 8_2:+62826933 | Msa1260780:exon |
| TCGCAATAATCGAAGACCTT+TGG | 0.392072 | 8_2:+62827368 | Msa1260780:CDS |
| ATCGGAAAGGGAGGTGGTGG+TGG | 0.394812 | 8_2:-62827066 | None:intergenic |
| TCGATCGAAGAATGTTCTTT+CGG | 0.416063 | 8_2:-62827135 | None:intergenic |
| CTTTCGGTTTGTTCGGGTGA+GGG | 0.416632 | 8_2:-62827119 | None:intergenic |
| TTTCATTCTGTTCAAAACTC+TGG | 0.420365 | 8_2:+62830929 | Msa1260780:three_prime_UTR |
| TTCGATCGACCCCTTGAAAA+CGG | 0.423298 | 8_2:+62827149 | Msa1260780:CDS |
| GGTTCAACTTTGTATGTTGA+GGG | 0.432816 | 8_2:+62827498 | Msa1260780:CDS |
| TGAGTCAGCATCGTCGGAAT+CGG | 0.440249 | 8_2:-62827084 | None:intergenic |
| TGGTGGTGTAGAGGCGGAGG+GGG | 0.441965 | 8_2:-62827014 | None:intergenic |
| CGACGAACAAGACCAGTAAC+AGG | 0.452733 | 8_2:-62827549 | None:intergenic |
| ACTCTGCTTTCAATTGGAAC+CGG | 0.452872 | 8_2:+62827339 | Msa1260780:CDS |
| TCGATTATTGCGAATTCCTC+CGG | 0.460792 | 8_2:-62827358 | None:intergenic |
| ACTGTTTATCCAGAGAGATT+GGG | 0.463960 | 8_2:+62827447 | Msa1260780:CDS |
| AAAAGATTTCCCAATCTCTC+TGG | 0.466169 | 8_2:-62827456 | None:intergenic |
| GGAAAGGGAGGTGGTGGTGG+TGG | 0.475226 | 8_2:-62827063 | None:intergenic |
| GGAGAGGAATGTGGCGGTGG+TGG | 0.481305 | 8_2:-62827031 | None:intergenic |
| TGGTTCAACTTTGTATGTTG+AGG | 0.482084 | 8_2:+62827497 | Msa1260780:CDS |
| GTGGTGGTGTAGAGGCGGAG+GGG | 0.482338 | 8_2:-62827015 | None:intergenic |
| AATAATAGCCAACTGCTCTC+AGG | 0.489315 | 8_2:-62830644 | None:intergenic |
| TGAGGGAAATCTTGAAACTA+AGG | 0.493057 | 8_2:+62827515 | Msa1260780:CDS |
| AGGGTTTAGTCAAGTGTGTA+GGG | 0.495222 | 8_2:+62826904 | None:intergenic |
| GGTGGTGGTGTAGAGGCGGA+GGG | 0.496372 | 8_2:-62827016 | None:intergenic |
| GTTTGTTCGGGTGAGGGTGA+AGG | 0.497382 | 8_2:-62827113 | None:intergenic |
| TCTTTCGGTTTGTTCGGGTG+AGG | 0.507243 | 8_2:-62827120 | None:intergenic |
| CATCGATTAGCATATTCCCT+AGG | 0.509481 | 8_2:-62827402 | None:intergenic |
| GATGTGCTGTTCAGTGGCAT+AGG | 0.510906 | 8_2:+62827421 | Msa1260780:intron |
| CTTGAAAACGGCCTCGATCC+CGG | 0.512027 | 8_2:+62827161 | Msa1260780:CDS |
| GGAATCGGAAAGGGAGGTGG+TGG | 0.515495 | 8_2:-62827069 | None:intergenic |
| AAGTATTTCAGTTTACGAAA+AGG | 0.515749 | 8_2:+62830885 | Msa1260780:three_prime_UTR |
| GTCGGAATCGGAAAGGGAGG+TGG | 0.523964 | 8_2:-62827072 | None:intergenic |
| TGGTGGTGGTGGTGCAGAAG+CGG | 0.527581 | 8_2:-62827052 | None:intergenic |
| AACTTTCTTGCGTGTTATGG+TGG | 0.528470 | 8_2:+62830845 | Msa1260780:three_prime_UTR |
| AAGGGTTTAGTCAAGTGTGT+AGG | 0.528799 | 8_2:+62826903 | None:intergenic |
| AGCTGCTGAGTCAGCATCGT+CGG | 0.533018 | 8_2:-62827090 | None:intergenic |
| AGCGGAGAGGAATGTGGCGG+TGG | 0.534849 | 8_2:-62827034 | None:intergenic |
| ATCGATTAGCATATTCCCTA+GGG | 0.534989 | 8_2:-62827401 | None:intergenic |
| ATGTGGCGGTGGTGGTGTAG+AGG | 0.540090 | 8_2:-62827023 | None:intergenic |
| CCTCGATCCCGGCGTTTACA+GGG | 0.544515 | 8_2:+62827172 | Msa1260780:CDS |
| AGCATCGTCGGAATCGGAAA+GGG | 0.546101 | 8_2:-62827078 | None:intergenic |
| TGGATTACCCTGTAAACGCC+GGG | 0.547278 | 8_2:-62827179 | None:intergenic |
| AATAGGAACATGGATTCAGT+TGG | 0.547473 | 8_2:+62830681 | Msa1260780:three_prime_UTR |
| CTTTGGATCATGAAAACCCT+AGG | 0.548586 | 8_2:+62827385 | Msa1260780:CDS |
| TTGCAGAAGAAACTCAAAAG+TGG | 0.548907 | 8_2:+62827306 | Msa1260780:CDS |
| CAAAATGACCTGAGAGCAGT+TGG | 0.549104 | 8_2:+62830636 | Msa1260780:CDS |
| TGGCGGTGGTGGTGTAGAGG+CGG | 0.554668 | 8_2:-62827020 | None:intergenic |
| CAGCATCGTCGGAATCGGAA+AGG | 0.567975 | 8_2:-62827079 | None:intergenic |
| ATGTGCTGTTCAGTGGCATA+GGG | 0.568113 | 8_2:+62827422 | Msa1260780:intron |
| AACATGGATTCAGTTGGCAA+TGG | 0.582768 | 8_2:+62830687 | Msa1260780:three_prime_UTR |
| TTATGCTTCAAATAGGAACA+TGG | 0.596901 | 8_2:+62830671 | Msa1260780:three_prime_UTR |
| AATGCAGAACTCAATTGGAA+TGG | 0.598745 | 8_2:+62826938 | Msa1260780:exon |
| CTGCTTTCAATTGGAACCGG+AGG | 0.599053 | 8_2:+62827342 | Msa1260780:CDS |
| TGCAGAAGCGGAGAGGAATG+TGG | 0.611426 | 8_2:-62827040 | None:intergenic |
| TTGGATTACCCTGTAAACGC+CGG | 0.618436 | 8_2:-62827180 | None:intergenic |
| AAGCAAAGAGCGATAGAGGG+TGG | 0.639654 | 8_2:-62826985 | None:intergenic |
| ATCGTCGGAATCGGAAAGGG+AGG | 0.643412 | 8_2:-62827075 | None:intergenic |
| GAAACTCAAAAGTGGAACTG+TGG | 0.647188 | 8_2:+62827314 | Msa1260780:CDS |
| TTTGGATCATGAAAACCCTA+GGG | 0.647262 | 8_2:+62827386 | Msa1260780:CDS |
| TCAACATACAAAGTTGAACC+AGG | 0.671731 | 8_2:-62827495 | None:intergenic |
| GAAAAGCAAAGAGCGATAGA+GGG | 0.690799 | 8_2:-62826988 | None:intergenic |
| GTGGTGGTGCAGAAGCGGAG+AGG | 0.690911 | 8_2:-62827047 | None:intergenic |
| TGTTGCTTAGGATCATCACC+CGG | 0.706101 | 8_2:-62830606 | None:intergenic |
| AGAAGCGGAGAGGAATGTGG+CGG | 0.710939 | 8_2:-62827037 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAAATTAACTAAAAA+CGG | - | chr8_2:62827819-62827838 | None:intergenic | 10.0% |
| !!! | TTTTTCAAATTTAATCTATT+TGG | - | chr8_2:62829267-62829286 | None:intergenic | 10.0% |
| !!! | CTTATGTTTAAAATAATATT+TGG | + | chr8_2:62830492-62830511 | Msa1260780:intron | 10.0% |
| !! | TTTCTATAACAAAAGATAAA+GGG | - | chr8_2:62828239-62828258 | None:intergenic | 15.0% |
| !! | ATTTCTATAACAAAAGATAA+AGG | - | chr8_2:62828240-62828259 | None:intergenic | 15.0% |
| !!! | ATTAATTTTATGCTTCAAAT+AGG | + | chr8_2:62830664-62830683 | Msa1260780:exon | 15.0% |
| !! | TTTATTCTGTAATTATATTC+TGG | + | chr8_2:62830717-62830736 | Msa1260780:three_prime_UTR | 15.0% |
| !! | AATCAAAATGAAATCATGAT+TGG | - | chr8_2:62827209-62827228 | None:intergenic | 20.0% |
| !!! | ATTGTGTTTTTTGTTTGTAT+AGG | + | chr8_2:62827251-62827270 | Msa1260780:intron | 20.0% |
| !!! | AAAACAGTTTGACTATATTT+TGG | + | chr8_2:62827997-62828016 | Msa1260780:intron | 20.0% |
| !! | TAAAATAAGCTAATCCAAAT+GGG | + | chr8_2:62828213-62828232 | Msa1260780:intron | 20.0% |
| !! | AATTGTATGCTATTATATAC+TGG | + | chr8_2:62828466-62828485 | Msa1260780:intron | 20.0% |
| !! | AAAAAAAAAAAATCCTCCTT+AGG | + | chr8_2:62828517-62828536 | Msa1260780:intron | 20.0% |
| !!! | TTTTAGAGAATGATAAACTA+AGG | + | chr8_2:62829002-62829021 | Msa1260780:intron | 20.0% |
| !!! | AATCATAAGCATTAGTTTAT+GGG | - | chr8_2:62829214-62829233 | None:intergenic | 20.0% |
| !! | CATTAACTAAAAAGTTGTAT+TGG | - | chr8_2:62829317-62829336 | None:intergenic | 20.0% |
| !!! | ATACAACTTTTTAGTTAATG+AGG | + | chr8_2:62829317-62829336 | Msa1260780:intron | 20.0% |
| !!! | TATATTTTCCTTGATAATTG+TGG | + | chr8_2:62829597-62829616 | Msa1260780:intron | 20.0% |
| !! | CTTATCTAAATAAGTCAATA+TGG | + | chr8_2:62829713-62829732 | Msa1260780:intron | 20.0% |
| !! | TAAAATATTCAATGAACACA+AGG | - | chr8_2:62829741-62829760 | None:intergenic | 20.0% |
| ! | ATGAAATCATGATTGGAAAT+TGG | - | chr8_2:62827202-62827221 | None:intergenic | 25.0% |
| ! | TAACTCTTCAAATGCTTAAT+AGG | + | chr8_2:62827611-62827630 | Msa1260780:intron | 25.0% |
| ! | AACTCTTCAAATGCTTAATA+GGG | + | chr8_2:62827612-62827631 | Msa1260780:intron | 25.0% |
| !! | TTTGCTATGGTATTTCATTT+AGG | + | chr8_2:62827690-62827709 | Msa1260780:intron | 25.0% |
| ! | TTGCTATGGTATTTCATTTA+GGG | + | chr8_2:62827691-62827710 | Msa1260780:intron | 25.0% |
| !! | TATTTCATTTAGGGTATGTT+TGG | + | chr8_2:62827700-62827719 | Msa1260780:intron | 25.0% |
| ! | AATTAACTAAAAACGGCTTA+TGG | - | chr8_2:62827812-62827831 | None:intergenic | 25.0% |
| ! | CTAAAATAAGCTAATCCAAA+TGG | + | chr8_2:62828212-62828231 | Msa1260780:intron | 25.0% |
| ! | AATACAAAATCCCCTTAATT+TGG | + | chr8_2:62828648-62828667 | Msa1260780:intron | 25.0% |
| ! | AAGGAAAATGCTTATTTGTA+CGG | + | chr8_2:62829021-62829040 | Msa1260780:intron | 25.0% |
| !! | AAACATAACAATCACGATTT+TGG | - | chr8_2:62829117-62829136 | None:intergenic | 25.0% |
| !! | GAATCATAAGCATTAGTTTA+TGG | - | chr8_2:62829215-62829234 | None:intergenic | 25.0% |
| ! | TAACTAAAAAGTTGTATTGG+AGG | - | chr8_2:62829314-62829333 | None:intergenic | 25.0% |
| !!! | AACTTTTTAGTTAATGAGGA+GGG | + | chr8_2:62829321-62829340 | Msa1260780:intron | 25.0% |
| ! | ATTTGTAACCACAATTATCA+AGG | - | chr8_2:62829608-62829627 | None:intergenic | 25.0% |
| ! | TTAGATAAGTCAATAAGATG+AGG | - | chr8_2:62829702-62829721 | None:intergenic | 25.0% |
| !!! | TGTTTCAATTTTGGAAAACT+AGG | - | chr8_2:62830161-62830180 | None:intergenic | 25.0% |
| !! | AGTTTTCCAAAATTGAAACA+TGG | + | chr8_2:62830161-62830180 | Msa1260780:intron | 25.0% |
| !! | AGAAATCCATGTTTCAATTT+TGG | - | chr8_2:62830170-62830189 | None:intergenic | 25.0% |
| ! | TTATTGAGTGAAATTCATGT+TGG | + | chr8_2:62830221-62830240 | Msa1260780:intron | 25.0% |
| ! | ATTTCACTCAATAATAGTGT+TGG | - | chr8_2:62830292-62830311 | None:intergenic | 25.0% |
| !! | AATGTTAGAGTAAGTATTGT+TGG | + | chr8_2:62830402-62830421 | Msa1260780:intron | 25.0% |
| ! | GTATTTGTAGTATTCATGTA+TGG | + | chr8_2:62830441-62830460 | Msa1260780:intron | 25.0% |
| ! | ATTCATGTATGGATATTCTA+TGG | + | chr8_2:62830452-62830471 | Msa1260780:intron | 25.0% |
| ! | AAGTATTTCAGTTTACGAAA+AGG | + | chr8_2:62830885-62830904 | Msa1260780:three_prime_UTR | 25.0% |
| ! | TTTGTTTGTATAGGCGATTT+TGG | + | chr8_2:62827260-62827279 | Msa1260780:intron | 30.0% |
| TTGATGAAAAATGTTCTTCC+TGG | + | chr8_2:62827477-62827496 | Msa1260780:CDS | 30.0% | |
| CCATAGCAAAAACTATATAG+TGG | - | chr8_2:62827680-62827699 | None:intergenic | 30.0% | |
| ! | CCACTATATAGTTTTTGCTA+TGG | + | chr8_2:62827677-62827696 | Msa1260780:intron | 30.0% |
| CAAAATAAGCTCAATCCAAA+CGG | - | chr8_2:62828025-62828044 | None:intergenic | 30.0% | |
| AAGCACTTATATAGTAAGAG+AGG | + | chr8_2:62828400-62828419 | Msa1260780:intron | 30.0% | |
| !! | GAGGGTTTTTAAAAAAAGGA+AGG | + | chr8_2:62828562-62828581 | Msa1260780:intron | 30.0% |
| TAAAAAAAGGAAGGAAGAAG+TGG | + | chr8_2:62828571-62828590 | Msa1260780:intron | 30.0% | |
| ! | TTTTCGTTCCTCCAAATTAA+GGG | - | chr8_2:62828662-62828681 | None:intergenic | 30.0% |
| ! | TTTTTCGTTCCTCCAAATTA+AGG | - | chr8_2:62828663-62828682 | None:intergenic | 30.0% |
| GAGGAACGAAAAAATTGTAT+TGG | + | chr8_2:62828670-62828689 | Msa1260780:intron | 30.0% | |
| GAACGAAAAAATTGTATTGG+AGG | + | chr8_2:62828673-62828692 | Msa1260780:intron | 30.0% | |
| TAAAAAGTTGTATTGGAGGA+GGG | - | chr8_2:62829310-62829329 | None:intergenic | 30.0% | |
| !!! | CAACTTTTTAGTTAATGAGG+AGG | + | chr8_2:62829320-62829339 | Msa1260780:intron | 30.0% |
| TGGAAGAAATAGAGTACATT+GGG | - | chr8_2:62829392-62829411 | None:intergenic | 30.0% | |
| AAAGCCTTAGAAACTGATAA+GGG | + | chr8_2:62829469-62829488 | Msa1260780:intron | 30.0% | |
| ! | TCGAACTGTTTAGAATTGTT+TGG | + | chr8_2:62829637-62829656 | Msa1260780:intron | 30.0% |
| ATCAACGATATATTGGAAGT+CGG | - | chr8_2:62829839-62829858 | None:intergenic | 30.0% | |
| CATGTACATCAACGATATAT+TGG | - | chr8_2:62829846-62829865 | None:intergenic | 30.0% | |
| ! | TCACTCAATAATAAGAGTGT+AGG | - | chr8_2:62830212-62830231 | None:intergenic | 30.0% |
| GAAATTCATGTTGGCATAAA+AGG | + | chr8_2:62830230-62830249 | Msa1260780:intron | 30.0% | |
| ! | AAGTCTCATCACTTTGAAAA+CGG | + | chr8_2:62830318-62830337 | Msa1260780:intron | 30.0% |
| TTATTGGATGAAAGTCATGT+GGG | - | chr8_2:62830365-62830384 | None:intergenic | 30.0% | |
| TCTTTCTATCTCTCTCTTAT+TGG | - | chr8_2:62830381-62830400 | None:intergenic | 30.0% | |
| AGTATTGTTGGTACTTTCAT+CGG | + | chr8_2:62830414-62830433 | Msa1260780:intron | 30.0% | |
| ACAGGAACTTATATTGCATT+AGG | - | chr8_2:62830557-62830576 | None:intergenic | 30.0% | |
| TTATGCTTCAAATAGGAACA+TGG | + | chr8_2:62830671-62830690 | Msa1260780:three_prime_UTR | 30.0% | |
| !!! | AGAGTTTTGAACAGAATGAA+AGG | - | chr8_2:62830930-62830949 | None:intergenic | 30.0% |
| AATGCAGAACTCAATTGGAA+TGG | + | chr8_2:62826938-62826957 | Msa1260780:exon | 35.0% | |
| ! | AATGTTCTTTCGGTTTGTTC+GGG | - | chr8_2:62827128-62827147 | None:intergenic | 35.0% |
| ! | GAATGTTCTTTCGGTTTGTT+CGG | - | chr8_2:62827129-62827148 | None:intergenic | 35.0% |
| TCGATCGAAGAATGTTCTTT+CGG | - | chr8_2:62827138-62827157 | None:intergenic | 35.0% | |
| !! | TTTGTATAGGCGATTTTGGT+AGG | + | chr8_2:62827264-62827283 | Msa1260780:intron | 35.0% |
| !!! | CTTTTGAGTTTCTTCTGCAA+CGG | - | chr8_2:62827306-62827325 | None:intergenic | 35.0% |
| TTGCAGAAGAAACTCAAAAG+TGG | + | chr8_2:62827306-62827325 | Msa1260780:CDS | 35.0% | |
| TTTGGATCATGAAAACCCTA+GGG | + | chr8_2:62827386-62827405 | Msa1260780:CDS | 35.0% | |
| ATCGATTAGCATATTCCCTA+GGG | - | chr8_2:62827404-62827423 | None:intergenic | 35.0% | |
| TACTGTTTATCCAGAGAGAT+TGG | + | chr8_2:62827446-62827465 | Msa1260780:CDS | 35.0% | |
| ACTGTTTATCCAGAGAGATT+GGG | + | chr8_2:62827447-62827466 | Msa1260780:CDS | 35.0% | |
| AAAAGATTTCCCAATCTCTC+TGG | - | chr8_2:62827459-62827478 | None:intergenic | 35.0% | |
| TCAACATACAAAGTTGAACC+AGG | - | chr8_2:62827498-62827517 | None:intergenic | 35.0% | |
| TGGTTCAACTTTGTATGTTG+AGG | + | chr8_2:62827497-62827516 | Msa1260780:CDS | 35.0% | |
| GGTTCAACTTTGTATGTTGA+GGG | + | chr8_2:62827498-62827517 | Msa1260780:CDS | 35.0% | |
| TGAGGGAAATCTTGAAACTA+AGG | + | chr8_2:62827515-62827534 | Msa1260780:CDS | 35.0% | |
| ! | TATTCTAGAGAGCTAGCTTA+TGG | + | chr8_2:62827768-62827787 | Msa1260780:intron | 35.0% |
| AGAGAAGCTAAACCAAACAT+AGG | - | chr8_2:62827859-62827878 | None:intergenic | 35.0% | |
| !! | TGTTTGTTTCTGCGTCAAAA+TGG | - | chr8_2:62827946-62827965 | None:intergenic | 35.0% |
| ! | GCTAAAAGTTGTTTCCATAG+TGG | - | chr8_2:62827970-62827989 | None:intergenic | 35.0% |
| !! | AGGGGAGGGTTTTTAAAAAA+AGG | + | chr8_2:62828558-62828577 | Msa1260780:intron | 35.0% |
| ! | ACAAAATCCCCTTAATTTGG+AGG | + | chr8_2:62828651-62828670 | Msa1260780:intron | 35.0% |
| TTTCGTTCCTCCAAATTAAG+GGG | - | chr8_2:62828661-62828680 | None:intergenic | 35.0% | |
| CGAAAAAATTGTATTGGAGG+AGG | + | chr8_2:62828676-62828695 | Msa1260780:intron | 35.0% | |
| ATGCTTATTTGTACGGAAGT+TGG | + | chr8_2:62829028-62829047 | Msa1260780:intron | 35.0% | |
| ! | CATAACAATCACGATTTTGG+TGG | - | chr8_2:62829114-62829133 | None:intergenic | 35.0% |
| CTAAAAAGTTGTATTGGAGG+AGG | - | chr8_2:62829311-62829330 | None:intergenic | 35.0% | |
| AGAAATAGAGTACATTGGGA+GGG | - | chr8_2:62829388-62829407 | None:intergenic | 35.0% | |
| AAGAAATAGAGTACATTGGG+AGG | - | chr8_2:62829389-62829408 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGTACAT+TGG | - | chr8_2:62829393-62829412 | None:intergenic | 35.0% | |
| GGAAAAAAAGAAGGAACAAG+TGG | - | chr8_2:62829412-62829431 | None:intergenic | 35.0% | |
| !!! | GAGGGTTTTGGAAAAAAAGA+AGG | - | chr8_2:62829421-62829440 | None:intergenic | 35.0% |
| !! | TAAGGCTTTGTTTGTGAGTT+TGG | - | chr8_2:62829458-62829477 | None:intergenic | 35.0% |
| CAAAGCCTTAGAAACTGATA+AGG | + | chr8_2:62829468-62829487 | Msa1260780:intron | 35.0% | |
| ! | AGTCATCAGATAAGGCTTTT+GGG | - | chr8_2:62829565-62829584 | None:intergenic | 35.0% |
| ! | AAGTCATCAGATAAGGCTTT+TGG | - | chr8_2:62829566-62829585 | None:intergenic | 35.0% |
| GCAAATCAAGTCATCAGATA+AGG | - | chr8_2:62829573-62829592 | None:intergenic | 35.0% | |
| ! | GAATTGTTTGGTGAGTAATG+TGG | + | chr8_2:62829649-62829668 | Msa1260780:intron | 35.0% |
| ATATTCAGCGAGTTATGATC+AGG | + | chr8_2:62829760-62829779 | Msa1260780:intron | 35.0% | |
| TCAACGATATATTGGAAGTC+GGG | - | chr8_2:62829838-62829857 | None:intergenic | 35.0% | |
| GCTTTCTTAGTTCAACTCAA+TGG | - | chr8_2:62830064-62830083 | None:intergenic | 35.0% | |
| TGACAAGTACAGATCAGTAA+TGG | - | chr8_2:62830127-62830146 | None:intergenic | 35.0% | |
| ! | AGTCTCATCACTTTGAAAAC+GGG | + | chr8_2:62830319-62830338 | Msa1260780:intron | 35.0% |
| TGGGTTCTACTACATTACTT+GGG | - | chr8_2:62830346-62830365 | None:intergenic | 35.0% | |
| CTTATTGGATGAAAGTCATG+TGG | - | chr8_2:62830366-62830385 | None:intergenic | 35.0% | |
| TAAAAATACAACACGACCTG+GGG | - | chr8_2:62830583-62830602 | None:intergenic | 35.0% | |
| CTAAAAATACAACACGACCT+GGG | - | chr8_2:62830584-62830603 | None:intergenic | 35.0% | |
| !!! | TCGTGTTGTATTTTTAGGTC+CGG | + | chr8_2:62830587-62830606 | Msa1260780:CDS | 35.0% |
| !! | TTTTGTTGTGTCTGTTGCTT+AGG | - | chr8_2:62830621-62830640 | None:intergenic | 35.0% |
| AATAGGAACATGGATTCAGT+TGG | + | chr8_2:62830681-62830700 | Msa1260780:three_prime_UTR | 35.0% | |
| ! | CTTTTGTGCTTTGTAACACA+AGG | + | chr8_2:62830810-62830829 | Msa1260780:three_prime_UTR | 35.0% |
| ATCAACTTTCTTGCGTGTTA+TGG | + | chr8_2:62830842-62830861 | Msa1260780:three_prime_UTR | 35.0% | |
| GAAAAGCAAAGAGCGATAGA+GGG | - | chr8_2:62826991-62827010 | None:intergenic | 40.0% | |
| TGAAAAGCAAAGAGCGATAG+AGG | - | chr8_2:62826992-62827011 | None:intergenic | 40.0% | |
| GAAACTCAAAAGTGGAACTG+TGG | + | chr8_2:62827314-62827333 | Msa1260780:CDS | 40.0% | |
| GTGGTTACTCTGCTTTCAAT+TGG | + | chr8_2:62827333-62827352 | Msa1260780:CDS | 40.0% | |
| ACTCTGCTTTCAATTGGAAC+CGG | + | chr8_2:62827339-62827358 | Msa1260780:CDS | 40.0% | |
| TCGATTATTGCGAATTCCTC+CGG | - | chr8_2:62827361-62827380 | None:intergenic | 40.0% | |
| TCGCAATAATCGAAGACCTT+TGG | + | chr8_2:62827368-62827387 | Msa1260780:CDS | 40.0% | |
| ! | CTAGGGTTTTCATGATCCAA+AGG | - | chr8_2:62827387-62827406 | None:intergenic | 40.0% |
| CTTTGGATCATGAAAACCCT+AGG | + | chr8_2:62827385-62827404 | Msa1260780:CDS | 40.0% | |
| ! | CATCGATTAGCATATTCCCT+AGG | - | chr8_2:62827405-62827424 | None:intergenic | 40.0% |
| ! | GTGTTTTCTGATCCTGTTAC+TGG | + | chr8_2:62827537-62827556 | Msa1260780:CDS | 40.0% |
| CTGTAATAGCTGCCTATGTT+TGG | + | chr8_2:62827844-62827863 | Msa1260780:intron | 40.0% | |
| GCAGAAACAAACAACCACTA+TGG | + | chr8_2:62827953-62827972 | Msa1260780:intron | 40.0% | |
| !!! | GACTATATTTTGGCTCCGTT+TGG | + | chr8_2:62828007-62828026 | Msa1260780:intron | 40.0% |
| CAAAAGATAAAGGGCCCATT+TGG | - | chr8_2:62828230-62828249 | None:intergenic | 40.0% | |
| ATAGCATACGATTGAGCAGT+AGG | - | chr8_2:62828330-62828349 | None:intergenic | 40.0% | |
| TTGAGCTGTAGATGTGTGTA+GGG | - | chr8_2:62828448-62828467 | None:intergenic | 40.0% | |
| ATTGAGCTGTAGATGTGTGT+AGG | - | chr8_2:62828449-62828468 | None:intergenic | 40.0% | |
| GAAGGAAGAAGTGGAAAGAA+TGG | + | chr8_2:62828580-62828599 | Msa1260780:intron | 40.0% | |
| AGAATGGAGAGATATGAGAG+TGG | + | chr8_2:62828596-62828615 | Msa1260780:intron | 40.0% | |
| ! | ATATGAGAGTGGAGGGTTTT+GGG | + | chr8_2:62828607-62828626 | Msa1260780:intron | 40.0% |
| ATTGTATTGGAGGAGGAGTT+TGG | + | chr8_2:62828683-62828702 | Msa1260780:intron | 40.0% | |
| !! | TTTTGGAGGGATGAGTTTAG+AGG | - | chr8_2:62828856-62828875 | None:intergenic | 40.0% |
| TTTGGGGGTGGAAAATAAAG+AGG | + | chr8_2:62828941-62828960 | Msa1260780:intron | 40.0% | |
| TTGGGGGTGGAAAATAAAGA+GGG | + | chr8_2:62828942-62828961 | Msa1260780:intron | 40.0% | |
| !! | CACGATTTTGGTGGAAAACA+CGG | - | chr8_2:62829105-62829124 | None:intergenic | 40.0% |
| GTGTCAAGTGTTTATAGGCA+AGG | - | chr8_2:62829140-62829159 | None:intergenic | 40.0% | |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr8_2:62829303-62829322 | None:intergenic | 40.0% |
| GAAATAGAGTACATTGGGAG+GGG | - | chr8_2:62829387-62829406 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGTGAGTTTGGA+GGG | - | chr8_2:62829454-62829473 | None:intergenic | 40.0% |
| CCTTCCCTTATCAGTTTCTA+AGG | - | chr8_2:62829476-62829495 | None:intergenic | 40.0% | |
| CCTTAGAAACTGATAAGGGA+AGG | + | chr8_2:62829473-62829492 | Msa1260780:intron | 40.0% | |
| AGTCCCTTTATATTTGCCAG+AGG | + | chr8_2:62829539-62829558 | Msa1260780:intron | 40.0% | |
| TGTGTGTTCTACTGCTTGTT+TGG | + | chr8_2:62830030-62830049 | Msa1260780:intron | 40.0% | |
| GAACTAAGAAAGCTCAAGCT+TGG | + | chr8_2:62830071-62830090 | Msa1260780:intron | 40.0% | |
| GTGGGTTCTACTACATTACT+TGG | - | chr8_2:62830347-62830366 | None:intergenic | 40.0% | |
| ! | TATAAGTTCCTGTTTTCCCC+AGG | + | chr8_2:62830564-62830583 | Msa1260780:intron | 40.0% |
| CCTAAAAATACAACACGACC+TGG | - | chr8_2:62830585-62830604 | None:intergenic | 40.0% | |
| ! | CCAGGTCGTGTTGTATTTTT+AGG | + | chr8_2:62830582-62830601 | Msa1260780:intron | 40.0% |
| !!! | CGTGTTGTATTTTTAGGTCC+GGG | + | chr8_2:62830588-62830607 | Msa1260780:CDS | 40.0% |
| AATAATAGCCAACTGCTCTC+AGG | - | chr8_2:62830647-62830666 | None:intergenic | 40.0% | |
| AACATGGATTCAGTTGGCAA+TGG | + | chr8_2:62830687-62830706 | Msa1260780:three_prime_UTR | 40.0% | |
| AACTTTCTTGCGTGTTATGG+TGG | + | chr8_2:62830845-62830864 | Msa1260780:three_prime_UTR | 40.0% | |
| ! | TACGAAAAGGACTTTTGCTC+TGG | + | chr8_2:62830898-62830917 | Msa1260780:three_prime_UTR | 40.0% |
| ! | ACGAAAAGGACTTTTGCTCT+GGG | + | chr8_2:62830899-62830918 | Msa1260780:three_prime_UTR | 40.0% |
| CGCAGAATGCAGAACTCAAT+TGG | + | chr8_2:62826933-62826952 | Msa1260780:exon | 45.0% | |
| TTCGATCGACCCCTTGAAAA+CGG | + | chr8_2:62827149-62827168 | Msa1260780:CDS | 45.0% | |
| TTGGATTACCCTGTAAACGC+CGG | - | chr8_2:62827183-62827202 | None:intergenic | 45.0% | |
| !! | GCGATTTTGGTAGGTAAAGC+TGG | + | chr8_2:62827273-62827292 | Msa1260780:CDS | 45.0% |
| ! | CTAATCGATGTGCTGTTCAG+TGG | + | chr8_2:62827415-62827434 | Msa1260780:intron | 45.0% |
| ! | ATGTGCTGTTCAGTGGCATA+GGG | + | chr8_2:62827422-62827441 | Msa1260780:intron | 45.0% |
| ! | GAAGTTGCTGTTCGTCGAAA+TGG | + | chr8_2:62827579-62827598 | Msa1260780:CDS | 45.0% |
| ! | CGTGCATTGGGATGCAATTT+TGG | - | chr8_2:62827886-62827905 | None:intergenic | 45.0% |
| ATTGCATCCCAATGCACGTT+TGG | + | chr8_2:62827888-62827907 | Msa1260780:intron | 45.0% | |
| ATCACAGCCAAACGTGCATT+GGG | - | chr8_2:62827898-62827917 | None:intergenic | 45.0% | |
| AATCACAGCCAAACGTGCAT+TGG | - | chr8_2:62827899-62827918 | None:intergenic | 45.0% | |
| ! | GCACGTTTGGCTGTGATTTT+AGG | + | chr8_2:62827901-62827920 | Msa1260780:intron | 45.0% |
| TCTGCGTCAAAATGGAAGCA+AGG | - | chr8_2:62827938-62827957 | None:intergenic | 45.0% | |
| AATCCTCCTTAGGCTCTGTT+TGG | + | chr8_2:62828527-62828546 | Msa1260780:intron | 45.0% | |
| ATCCTCCTTAGGCTCTGTTT+GGG | + | chr8_2:62828528-62828547 | Msa1260780:intron | 45.0% | |
| TAACTCCCAAACAGAGCCTA+AGG | - | chr8_2:62828536-62828555 | None:intergenic | 45.0% | |
| GCTCTGTTTGGGAGTTATGA+GGG | + | chr8_2:62828539-62828558 | Msa1260780:intron | 45.0% | |
| CTCTGTTTGGGAGTTATGAG+GGG | + | chr8_2:62828540-62828559 | Msa1260780:intron | 45.0% | |
| ATGGAGAGATATGAGAGTGG+AGG | + | chr8_2:62828599-62828618 | Msa1260780:intron | 45.0% | |
| TGGAGAGATATGAGAGTGGA+GGG | + | chr8_2:62828600-62828619 | Msa1260780:intron | 45.0% | |
| ! | GATATGAGAGTGGAGGGTTT+TGG | + | chr8_2:62828606-62828625 | Msa1260780:intron | 45.0% |
| TATTGGAGGAGGAGTTTGGA+GGG | + | chr8_2:62828687-62828706 | Msa1260780:intron | 45.0% | |
| TAAGGCTCTGTTTGGGAGTT+TGG | - | chr8_2:62828888-62828907 | None:intergenic | 45.0% | |
| AAACTCCCAAACAGAGCCTT+AGG | + | chr8_2:62828887-62828906 | Msa1260780:intron | 45.0% | |
| AACTCCCAAACAGAGCCTTA+GGG | + | chr8_2:62828888-62828907 | Msa1260780:intron | 45.0% | |
| AAAGCCCTAAGGCTCTGTTT+GGG | - | chr8_2:62828895-62828914 | None:intergenic | 45.0% | |
| !! | GATTTTGGTGGAAAACACGG+AGG | - | chr8_2:62829102-62829121 | None:intergenic | 45.0% |
| GCCTATAAACACTTGACACG+TGG | + | chr8_2:62829141-62829160 | Msa1260780:intron | 45.0% | |
| GCCACGTGTCAAGTGTTTAT+AGG | - | chr8_2:62829145-62829164 | None:intergenic | 45.0% | |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr8_2:62829302-62829321 | None:intergenic | 45.0% |
| ! | GTTGTATTGGAGGAGGGTTT+TGG | - | chr8_2:62829304-62829323 | None:intergenic | 45.0% |
| TTTGTGAGTTTGGAGGGAAC+GGG | - | chr8_2:62829448-62829467 | None:intergenic | 45.0% | |
| GTTTGTGAGTTTGGAGGGAA+CGG | - | chr8_2:62829449-62829468 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGTGAGTTTGG+AGG | - | chr8_2:62829455-62829474 | None:intergenic | 45.0% |
| GGGCCTCTGGCAAATATAAA+GGG | - | chr8_2:62829545-62829564 | None:intergenic | 45.0% | |
| TGGGCCTCTGGCAAATATAA+AGG | - | chr8_2:62829546-62829565 | None:intergenic | 45.0% | |
| ! | TGTTGCTTAGGATCATCACC+CGG | - | chr8_2:62830609-62830628 | None:intergenic | 45.0% |
| CAAAATGACCTGAGAGCAGT+TGG | + | chr8_2:62830636-62830655 | Msa1260780:CDS | 45.0% | |
| !!! | GTATTATTTATAAATTTTTA+AGG | - | chr8_2:62828151-62828170 | None:intergenic | 5.0% |
| !!! | GATTTTTTTTTTTTTTTTTA+TGG | - | chr8_2:62828511-62828530 | None:intergenic | 5.0% |
| !!! | TTTATATTTTTTAATTTCAA+AGG | - | chr8_2:62829876-62829895 | None:intergenic | 5.0% |
| AAGCAAAGAGCGATAGAGGG+TGG | - | chr8_2:62826988-62827007 | None:intergenic | 50.0% | |
| AGCATCGTCGGAATCGGAAA+GGG | - | chr8_2:62827081-62827100 | None:intergenic | 50.0% | |
| TGAGTCAGCATCGTCGGAAT+CGG | - | chr8_2:62827087-62827106 | None:intergenic | 50.0% | |
| ! | CTTTCGGTTTGTTCGGGTGA+GGG | - | chr8_2:62827122-62827141 | None:intergenic | 50.0% |
| ! | TCTTTCGGTTTGTTCGGGTG+AGG | - | chr8_2:62827123-62827142 | None:intergenic | 50.0% |
| TGGATTACCCTGTAAACGCC+GGG | - | chr8_2:62827182-62827201 | None:intergenic | 50.0% | |
| CTGCTTTCAATTGGAACCGG+AGG | + | chr8_2:62827342-62827361 | Msa1260780:CDS | 50.0% | |
| ! | GATGTGCTGTTCAGTGGCAT+AGG | + | chr8_2:62827421-62827440 | Msa1260780:intron | 50.0% |
| CGACGAACAAGACCAGTAAC+AGG | - | chr8_2:62827552-62827571 | None:intergenic | 50.0% | |
| TTGAGCAGTAGGTGTGCGTA+GGG | - | chr8_2:62828319-62828338 | None:intergenic | 50.0% | |
| ATTGAGCAGTAGGTGTGCGT+AGG | - | chr8_2:62828320-62828339 | None:intergenic | 50.0% | |
| CTGTAGATGTGTGTAGGGAG+AGG | - | chr8_2:62828443-62828462 | None:intergenic | 50.0% | |
| GGCTCTGTTTGGGAGTTATG+AGG | + | chr8_2:62828538-62828557 | Msa1260780:intron | 50.0% | |
| TGTTTGGGAGTTATGAGGGG+AGG | + | chr8_2:62828543-62828562 | Msa1260780:intron | 50.0% | |
| GTTTGGGAGTTATGAGGGGA+GGG | + | chr8_2:62828544-62828563 | Msa1260780:intron | 50.0% | |
| GTATTGGAGGAGGAGTTTGG+AGG | + | chr8_2:62828686-62828705 | Msa1260780:intron | 50.0% | |
| ! | AGGAGGAGTTTGGAGGGTTT+TGG | + | chr8_2:62828693-62828712 | Msa1260780:intron | 50.0% |
| ! | GGAGGAGTTTGGAGGGTTTT+GGG | + | chr8_2:62828694-62828713 | Msa1260780:intron | 50.0% |
| ! | GAGGAGTTTGGAGGGTTTTG+GGG | + | chr8_2:62828695-62828714 | Msa1260780:intron | 50.0% |
| !! | AGGAGTTTGGAGGGTTTTGG+GGG | + | chr8_2:62828696-62828715 | Msa1260780:intron | 50.0% |
| CTCTGTTTGGGAGTTTGGAG+GGG | - | chr8_2:62828883-62828902 | None:intergenic | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | - | chr8_2:62828884-62828903 | None:intergenic | 50.0% | |
| CAAAGCCCTAAGGCTCTGTT+TGG | - | chr8_2:62828896-62828915 | None:intergenic | 50.0% | |
| !! | CAGAGCCTTAGGGCTTTGTT+TGG | + | chr8_2:62828898-62828917 | Msa1260780:intron | 50.0% |
| !! | AGCCTTAGGGCTTTGTTTGG+AGG | + | chr8_2:62828901-62828920 | Msa1260780:intron | 50.0% |
| !! | GCCTTAGGGCTTTGTTTGGA+GGG | + | chr8_2:62828902-62828921 | Msa1260780:intron | 50.0% |
| !! | CCTTAGGGCTTTGTTTGGAG+GGG | + | chr8_2:62828903-62828922 | Msa1260780:intron | 50.0% |
| GAGGTGTGGGTGGAAATCAA+AGG | - | chr8_2:62829083-62829102 | None:intergenic | 50.0% | |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | - | chr8_2:62829300-62829319 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr8_2:62829301-62829320 | None:intergenic | 50.0% |
| !!! | TTGGGAGGGGAGGGTTTTTT+GGG | - | chr8_2:62829374-62829393 | None:intergenic | 50.0% |
| !!! | ATTGGGAGGGGAGGGTTTTT+TGG | - | chr8_2:62829375-62829394 | None:intergenic | 50.0% |
| TAGAGTACATTGGGAGGGGA+GGG | - | chr8_2:62829383-62829402 | None:intergenic | 50.0% | |
| ATAGAGTACATTGGGAGGGG+AGG | - | chr8_2:62829384-62829403 | None:intergenic | 50.0% | |
| ! | AGATAAGGCTTTTGGGCCTC+TGG | - | chr8_2:62829558-62829577 | None:intergenic | 50.0% |
| AGAAGCGGAGAGGAATGTGG+CGG | - | chr8_2:62827040-62827059 | None:intergenic | 55.0% | |
| TGCAGAAGCGGAGAGGAATG+TGG | - | chr8_2:62827043-62827062 | None:intergenic | 55.0% | |
| ATCGTCGGAATCGGAAAGGG+AGG | - | chr8_2:62827078-62827097 | None:intergenic | 55.0% | |
| CAGCATCGTCGGAATCGGAA+AGG | - | chr8_2:62827082-62827101 | None:intergenic | 55.0% | |
| AGCTGCTGAGTCAGCATCGT+CGG | - | chr8_2:62827093-62827112 | None:intergenic | 55.0% | |
| GTTTGTTCGGGTGAGGGTGA+AGG | - | chr8_2:62827116-62827135 | None:intergenic | 55.0% | |
| !! | GGATCGAGGCCGTTTTCAAG+GGG | - | chr8_2:62827161-62827180 | None:intergenic | 55.0% |
| !! | GGGATCGAGGCCGTTTTCAA+GGG | - | chr8_2:62827162-62827181 | None:intergenic | 55.0% |
| CTTGAAAACGGCCTCGATCC+CGG | + | chr8_2:62827161-62827180 | Msa1260780:CDS | 55.0% | |
| CTCCCAAACAGAGCCTAAGG+AGG | - | chr8_2:62828533-62828552 | None:intergenic | 55.0% | |
| !!! | TGAGAGTGGAGGGTTTTGGG+AGG | + | chr8_2:62828610-62828629 | Msa1260780:intron | 55.0% |
| !!! | GGAGTTTGGAGGGTTTTGGG+GGG | + | chr8_2:62828697-62828716 | Msa1260780:intron | 55.0% |
| !!! | TTGGAGGGTTTTGGGGGGTT+TGG | + | chr8_2:62828702-62828721 | Msa1260780:intron | 55.0% |
| !!! | TGGAGGGTTTTGGGGGGTTT+GGG | + | chr8_2:62828703-62828722 | Msa1260780:intron | 55.0% |
| !!! | TTGGAGGGGAGGGTTTTGGA+GGG | - | chr8_2:62828869-62828888 | None:intergenic | 55.0% |
| !! | TTTGGAGGGGAGGGTTTTGG+AGG | - | chr8_2:62828870-62828889 | None:intergenic | 55.0% |
| ! | GAGTTTGGAGGGGAGGGTTT+TGG | - | chr8_2:62828873-62828892 | None:intergenic | 55.0% |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr8_2:62828879-62828898 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr8_2:62828880-62828899 | None:intergenic | 55.0% | |
| GGCTCTGTTTGGGAGTTTGG+AGG | - | chr8_2:62828885-62828904 | None:intergenic | 55.0% | |
| CCCCTCCAAACAAAGCCCTA+AGG | - | chr8_2:62828906-62828925 | None:intergenic | 55.0% | |
| !! | TAGGGCTTTGTTTGGAGGGG+AGG | + | chr8_2:62828906-62828925 | Msa1260780:intron | 55.0% |
| !! | AGGGCTTTGTTTGGAGGGGA+GGG | + | chr8_2:62828907-62828926 | Msa1260780:intron | 55.0% |
| TTTGTTTGGAGGGGAGGGGA+AGG | + | chr8_2:62828912-62828931 | Msa1260780:intron | 55.0% | |
| TTGTTTGGAGGGGAGGGGAA+GGG | + | chr8_2:62828913-62828932 | Msa1260780:intron | 55.0% | |
| GGAGGGGAAGGGAAGACTTT+GGG | + | chr8_2:62828924-62828943 | Msa1260780:intron | 55.0% | |
| GAGGGGAAGGGAAGACTTTG+GGG | + | chr8_2:62828925-62828944 | Msa1260780:intron | 55.0% | |
| AGGGGAAGGGAAGACTTTGG+GGG | + | chr8_2:62828926-62828945 | Msa1260780:intron | 55.0% | |
| ! | GGTGGAAAACACGGAGGTGT+GGG | - | chr8_2:62829096-62829115 | None:intergenic | 55.0% |
| TGGTGGAAAACACGGAGGTG+TGG | - | chr8_2:62829097-62829116 | None:intergenic | 55.0% | |
| !!! | TGGGAGGGGAGGGTTTTTTG+GGG | - | chr8_2:62829373-62829392 | None:intergenic | 55.0% |
| TGAGTTTGGAGGGAACGGGA+GGG | - | chr8_2:62829444-62829463 | None:intergenic | 55.0% | |
| CAACACGACCTGGGGAAAAC+AGG | - | chr8_2:62830575-62830594 | None:intergenic | 55.0% | |
| ! | ATGTGGCGGTGGTGGTGTAG+AGG | - | chr8_2:62827026-62827045 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTGGTGCAGAAG+CGG | - | chr8_2:62827055-62827074 | None:intergenic | 60.0% |
| ! | ATCGGAAAGGGAGGTGGTGG+TGG | - | chr8_2:62827069-62827088 | None:intergenic | 60.0% |
| GGAATCGGAAAGGGAGGTGG+TGG | - | chr8_2:62827072-62827091 | None:intergenic | 60.0% | |
| GTCGGAATCGGAAAGGGAGG+TGG | - | chr8_2:62827075-62827094 | None:intergenic | 60.0% | |
| !! | CGGGATCGAGGCCGTTTTCA+AGG | - | chr8_2:62827163-62827182 | None:intergenic | 60.0% |
| CCTCGATCCCGGCGTTTACA+GGG | + | chr8_2:62827172-62827191 | Msa1260780:CDS | 60.0% | |
| AGTAGGTGTGCGTAGGGAGG+GGG | - | chr8_2:62828313-62828332 | None:intergenic | 60.0% | |
| CAGTAGGTGTGCGTAGGGAG+GGG | - | chr8_2:62828314-62828333 | None:intergenic | 60.0% | |
| GCAGTAGGTGTGCGTAGGGA+GGG | - | chr8_2:62828315-62828334 | None:intergenic | 60.0% | |
| AGCAGTAGGTGTGCGTAGGG+AGG | - | chr8_2:62828316-62828335 | None:intergenic | 60.0% | |
| !! | GGGCTTTGTTTGGAGGGGAG+GGG | + | chr8_2:62828908-62828927 | Msa1260780:intron | 60.0% |
| GGGAGGGGAAGGGAAGACTT+TGG | + | chr8_2:62828923-62828942 | Msa1260780:intron | 60.0% | |
| ! | GGAAGGGAAGACTTTGGGGG+TGG | + | chr8_2:62828929-62828948 | Msa1260780:intron | 60.0% |
| ! | GGAAAACACGGAGGTGTGGG+TGG | - | chr8_2:62829093-62829112 | None:intergenic | 60.0% |
| !!! | GGAGGGGAGGGTTTTTTGGG+GGG | - | chr8_2:62829371-62829390 | None:intergenic | 60.0% |
| !!! | GGGAGGGGAGGGTTTTTTGG+GGG | - | chr8_2:62829372-62829391 | None:intergenic | 60.0% |
| GAGTTTGGAGGGAACGGGAG+GGG | - | chr8_2:62829443-62829462 | None:intergenic | 60.0% | |
| GTGAGTTTGGAGGGAACGGG+AGG | - | chr8_2:62829445-62829464 | None:intergenic | 60.0% | |
| ! | TGGTGGTGTAGAGGCGGAGG+GGG | - | chr8_2:62827017-62827036 | None:intergenic | 65.0% |
| ! | GTGGTGGTGTAGAGGCGGAG+GGG | - | chr8_2:62827018-62827037 | None:intergenic | 65.0% |
| ! | GGTGGTGGTGTAGAGGCGGA+GGG | - | chr8_2:62827019-62827038 | None:intergenic | 65.0% |
| ! | TGGCGGTGGTGGTGTAGAGG+CGG | - | chr8_2:62827023-62827042 | None:intergenic | 65.0% |
| GGAGAGGAATGTGGCGGTGG+TGG | - | chr8_2:62827034-62827053 | None:intergenic | 65.0% | |
| AGCGGAGAGGAATGTGGCGG+TGG | - | chr8_2:62827037-62827056 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGCAGAAGCGGAG+AGG | - | chr8_2:62827050-62827069 | None:intergenic | 65.0% |
| !! | GGAAAGGGAGGTGGTGGTGG+TGG | - | chr8_2:62827066-62827085 | None:intergenic | 65.0% |
| GCCTCGATCCCGGCGTTTAC+AGG | + | chr8_2:62827171-62827190 | Msa1260780:CDS | 65.0% | |
| CCCTGTAAACGCCGGGATCG+AGG | - | chr8_2:62827175-62827194 | None:intergenic | 65.0% | |
| ! | GGAACGGGAGGGGAGGGTTT+TGG | - | chr8_2:62829433-62829452 | None:intergenic | 65.0% |
| TTGGAGGGAACGGGAGGGGA+GGG | - | chr8_2:62829439-62829458 | None:intergenic | 65.0% | |
| TTTGGAGGGAACGGGAGGGG+AGG | - | chr8_2:62829440-62829459 | None:intergenic | 65.0% | |
| ! | CGGTGGTGGTGTAGAGGCGG+AGG | - | chr8_2:62827020-62827039 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 62826907 | 62830949 | 62826907 | ID=Msa1260780;Name=Msa1260780 |
| chr8_2 | mRNA | 62826907 | 62830949 | 62826907 | ID=Msa1260780-mRNA-1;Parent=Msa1260780;Name=Msa1260780-mRNA-1;_AED=0.01;_eAED=0.01;_QI=32|0.66|0.5|1|0.33|0.25|4|281|219 |
| chr8_2 | exon | 62826907 | 62827193 | 62826907 | ID=Msa1260780-mRNA-1:exon:20018;Parent=Msa1260780-mRNA-1 |
| chr8_2 | exon | 62827273 | 62827428 | 62827273 | ID=Msa1260780-mRNA-1:exon:20019;Parent=Msa1260780-mRNA-1 |
| chr8_2 | exon | 62827435 | 62827600 | 62827435 | ID=Msa1260780-mRNA-1:exon:20020;Parent=Msa1260780-mRNA-1 |
| chr8_2 | exon | 62830586 | 62830949 | 62830586 | ID=Msa1260780-mRNA-1:exon:20021;Parent=Msa1260780-mRNA-1 |
| chr8_2 | five_prime_UTR | 62826907 | 62826938 | 62826907 | ID=Msa1260780-mRNA-1:five_prime_utr;Parent=Msa1260780-mRNA-1 |
| chr8_2 | CDS | 62826939 | 62827193 | 62826939 | ID=Msa1260780-mRNA-1:cds;Parent=Msa1260780-mRNA-1 |
| chr8_2 | CDS | 62827273 | 62827428 | 62827273 | ID=Msa1260780-mRNA-1:cds;Parent=Msa1260780-mRNA-1 |
| chr8_2 | CDS | 62827435 | 62827600 | 62827435 | ID=Msa1260780-mRNA-1:cds;Parent=Msa1260780-mRNA-1 |
| chr8_2 | CDS | 62830586 | 62830668 | 62830586 | ID=Msa1260780-mRNA-1:cds;Parent=Msa1260780-mRNA-1 |
| chr8_2 | three_prime_UTR | 62830669 | 62830949 | 62830669 | ID=Msa1260780-mRNA-1:three_prime_utr;Parent=Msa1260780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
