Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331510 | sp|Q84J78|SSBP_ARATH | 36.486 | 148 | 81 | 4 | 64 | 202 | 43 | 186 | 4.73e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331510 | I3T5L6 | 96.833 | 221 | 4 | 2 | 1 | 219 | 20 | 239 | 3.84e-152 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1260780 | Msa1331510 | 0.908305 | 1.975908e-81 | -8.615850e-47 |
| Msa1299690 | Msa1331510 | 0.834891 | 2.305543e-56 | -8.615850e-47 |
| Msa1331510 | Msa1332230 | 0.806569 | 7.718415e-50 | -8.615850e-47 |
| Msa1331510 | Msa1433590 | 0.852059 | 5.915739e-61 | -8.615850e-47 |
| Msa1211820 | Msa1331510 | 0.836611 | 8.455464e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331510 | MtrunA17_Chr4g0062401 | 96.833 | 221 | 4 | 2 | 1 | 219 | 20 | 239 | 9.02e-156 | 431 |
| Msa1331510 | MtrunA17_Chr1g0192461 | 33.523 | 176 | 100 | 5 | 40 | 202 | 26 | 197 | 2.22e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331510 | AT3G18580.1 | 56.502 | 223 | 81 | 4 | 7 | 219 | 1 | 217 | 2.00e-80 | 239 |
| Msa1331510 | AT4G11060.1 | 36.486 | 148 | 81 | 4 | 64 | 202 | 43 | 186 | 4.81e-26 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCGATCCCGGCGTTTAC+AGG | 0.255108 | 8_4:+51056944 | Msa1331510:CDS |
| ATCAACTTTCTTGCGTGTTA+TGG | 0.306546 | 8_4:+51060598 | Msa1331510:three_prime_UTR |
| TTTATTCTGTAATTATATTC+TGG | 0.330586 | 8_4:+51060473 | Msa1331510:three_prime_UTR |
| TTTGTTTGTATAGGCGATTT+TGG | 0.333461 | 8_4:+51057033 | Msa1331510:intron |
| TACTGTTTATCCAGAGAGAT+TGG | 0.333815 | 8_4:+51057219 | Msa1331510:CDS |
| GAATGTTCTTTCGGTTTGTT+CGG | 0.334526 | 8_4:-51056899 | None:intergenic |
| GAAGTTGCTGTTCGTCGAAA+TGG | 0.345840 | 8_4:+51057352 | Msa1331510:CDS |
| CGGTGGTGGTGTAGAGGCGG+AGG | 0.360591 | 8_4:-51056790 | None:intergenic |
| AATGTTCTTTCGGTTTGTTC+GGG | 0.370708 | 8_4:-51056898 | None:intergenic |
| GTGGTTACTCTGCTTTCAAT+TGG | 0.375327 | 8_4:+51057106 | Msa1331510:CDS |
| TGAAAAGCAAAGAGCGATAG+AGG | 0.376251 | 8_4:-51056762 | None:intergenic |
| CGCAGAATGCAGAACTCAAT+TGG | 0.378364 | 8_4:+51056706 | Msa1331510:exon |
| TCGCAATAATCGAAGACCTT+TGG | 0.392072 | 8_4:+51057141 | Msa1331510:CDS |
| TCGATCGAAGAATGTTCTTT+CGG | 0.416063 | 8_4:-51056908 | None:intergenic |
| CTTTCGGTTTGTTCGGGTGA+GGG | 0.416222 | 8_4:-51056892 | None:intergenic |
| TTCGATCGACCCCTTGAAAA+CGG | 0.423298 | 8_4:+51056922 | Msa1331510:CDS |
| GGTTCAACTTTGTATGTTGA+GGG | 0.432816 | 8_4:+51057271 | Msa1331510:CDS |
| TGAGTCAGCATCGTCGGAAT+CGG | 0.440249 | 8_4:-51056857 | None:intergenic |
| TGGTGGTGTAGAGGCGGAGG+GGG | 0.441965 | 8_4:-51056787 | None:intergenic |
| CGACGAACAAGACCAGTAAC+AGG | 0.452733 | 8_4:-51057322 | None:intergenic |
| ACTCTGCTTTCAATTGGAAC+CGG | 0.452872 | 8_4:+51057112 | Msa1331510:CDS |
| TCGATTATTGCGAATTCCTC+CGG | 0.460792 | 8_4:-51057131 | None:intergenic |
| ACTGTTTATCCAGAGAGATT+GGG | 0.463960 | 8_4:+51057220 | Msa1331510:CDS |
| AAAAGATTTCCCAATCTCTC+TGG | 0.466169 | 8_4:-51057229 | None:intergenic |
| ATCGGAAAGGGAGGTGGTCG+TGG | 0.466907 | 8_4:-51056839 | None:intergenic |
| TTTCATCCTGTTCAAAACTC+TGG | 0.469871 | 8_4:+51060685 | Msa1331510:three_prime_UTR |
| GGAGAGGAATGTGGCGGTGG+TGG | 0.481305 | 8_4:-51056804 | None:intergenic |
| TGGTTCAACTTTGTATGTTG+AGG | 0.482084 | 8_4:+51057270 | Msa1331510:CDS |
| GTGGTGGTGTAGAGGCGGAG+GGG | 0.482338 | 8_4:-51056788 | None:intergenic |
| AATAATAGCCAACTGCTCTC+AGG | 0.489315 | 8_4:-51060400 | None:intergenic |
| TGAGGGAAATCTTGAAACTA+AGG | 0.493057 | 8_4:+51057288 | Msa1331510:CDS |
| AGGGTTTAGTCAAGTGTGTA+GGG | 0.495222 | 8_4:+51056677 | None:intergenic |
| GGTGGTGGTGTAGAGGCGGA+GGG | 0.496372 | 8_4:-51056789 | None:intergenic |
| GTTTGTTCGGGTGAGGGAGA+AGG | 0.501354 | 8_4:-51056886 | None:intergenic |
| CATCGATTAGCATATTCCCT+AGG | 0.509481 | 8_4:-51057175 | None:intergenic |
| GATGTGCTGTTCAGTGGCAT+AGG | 0.510906 | 8_4:+51057194 | Msa1331510:intron |
| CTTGAAAACGGCCTCGATCC+CGG | 0.512027 | 8_4:+51056934 | Msa1331510:CDS |
| AAGTATTTCAGTTTACGAAA+AGG | 0.515749 | 8_4:+51060641 | Msa1331510:three_prime_UTR |
| TCTTTCGGTTTGTTCGGGTG+AGG | 0.517465 | 8_4:-51056893 | None:intergenic |
| AACTTTCTTGCGTGTTATGG+TGG | 0.528470 | 8_4:+51060601 | Msa1331510:three_prime_UTR |
| AAGGGTTTAGTCAAGTGTGT+AGG | 0.528799 | 8_4:+51056676 | None:intergenic |
| AGCTGCTGAGTCAGCATCGT+CGG | 0.533018 | 8_4:-51056863 | None:intergenic |
| TGGTCGTGGTGGTGCAGAAG+CGG | 0.533181 | 8_4:-51056825 | None:intergenic |
| AGCGGAGAGGAATGTGGCGG+TGG | 0.534849 | 8_4:-51056807 | None:intergenic |
| ATCGATTAGCATATTCCCTA+GGG | 0.534989 | 8_4:-51057174 | None:intergenic |
| ATGTGGCGGTGGTGGTGTAG+AGG | 0.540090 | 8_4:-51056796 | None:intergenic |
| GTCGGAATCGGAAAGGGAGG+TGG | 0.544421 | 8_4:-51056845 | None:intergenic |
| CCTCGATCCCGGCGTTTACA+GGG | 0.544515 | 8_4:+51056945 | Msa1331510:CDS |
| AGCATCGTCGGAATCGGAAA+GGG | 0.546101 | 8_4:-51056851 | None:intergenic |
| TGGATTACCCTGTAAACGCC+GGG | 0.547278 | 8_4:-51056952 | None:intergenic |
| AATAGGAACATGGATTCAGT+TGG | 0.547473 | 8_4:+51060437 | Msa1331510:three_prime_UTR |
| CTTTGGATCATGAAAACCCT+AGG | 0.548586 | 8_4:+51057158 | Msa1331510:CDS |
| TTGCAGAAGAAACTCAAAAG+TGG | 0.548907 | 8_4:+51057079 | Msa1331510:CDS |
| CAAAATGACCTGAGAGCAGT+TGG | 0.549104 | 8_4:+51060392 | Msa1331510:CDS |
| TGGCGGTGGTGGTGTAGAGG+CGG | 0.554668 | 8_4:-51056793 | None:intergenic |
| CAGCATCGTCGGAATCGGAA+AGG | 0.567975 | 8_4:-51056852 | None:intergenic |
| ATGTGCTGTTCAGTGGCATA+GGG | 0.568113 | 8_4:+51057195 | Msa1331510:intron |
| AACATGGATTCAGTTGGCAA+TGG | 0.582768 | 8_4:+51060443 | Msa1331510:three_prime_UTR |
| TTATGCTTCAAATAGGAACA+TGG | 0.596901 | 8_4:+51060427 | Msa1331510:three_prime_UTR |
| AATGCAGAACTCAATTGGAA+TGG | 0.598745 | 8_4:+51056711 | Msa1331510:exon |
| CTGCTTTCAATTGGAACCGG+AGG | 0.599053 | 8_4:+51057115 | Msa1331510:CDS |
| GGAAAGGGAGGTGGTCGTGG+TGG | 0.607320 | 8_4:-51056836 | None:intergenic |
| TGCAGAAGCGGAGAGGAATG+TGG | 0.611426 | 8_4:-51056813 | None:intergenic |
| TTGGATTACCCTGTAAACGC+CGG | 0.618436 | 8_4:-51056953 | None:intergenic |
| AAGCAAAGAGCGATAGAGGG+TGG | 0.639654 | 8_4:-51056758 | None:intergenic |
| ATCGTCGGAATCGGAAAGGG+AGG | 0.643412 | 8_4:-51056848 | None:intergenic |
| GAAACTCAAAAGTGGAACTG+TGG | 0.647188 | 8_4:+51057087 | Msa1331510:CDS |
| TTTGGATCATGAAAACCCTA+GGG | 0.647262 | 8_4:+51057159 | Msa1331510:CDS |
| TCAACATACAAAGTTGAACC+AGG | 0.671731 | 8_4:-51057268 | None:intergenic |
| GAAAAGCAAAGAGCGATAGA+GGG | 0.690799 | 8_4:-51056761 | None:intergenic |
| GTGGTGGTGCAGAAGCGGAG+AGG | 0.698927 | 8_4:-51056820 | None:intergenic |
| TGTTGCTTAGGATCATCACC+CGG | 0.706101 | 8_4:-51060362 | None:intergenic |
| AGAAGCGGAGAGGAATGTGG+CGG | 0.710939 | 8_4:-51056810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAAATTAACTAAAAA+CGG | - | chr8_4:51057592-51057611 | None:intergenic | 10.0% |
| !!! | TTTTTCAAATTTAATCTATT+TGG | - | chr8_4:51059023-51059042 | None:intergenic | 10.0% |
| !!! | CTTATGTTTAAAATAATATT+TGG | + | chr8_4:51060248-51060267 | Msa1331510:intron | 10.0% |
| !! | TTTCTATAACAAAAGATAAA+GGG | - | chr8_4:51057999-51058018 | None:intergenic | 15.0% |
| !! | ATTTCTATAACAAAAGATAA+AGG | - | chr8_4:51058000-51058019 | None:intergenic | 15.0% |
| !!! | ATTAATTTTATGCTTCAAAT+AGG | + | chr8_4:51060420-51060439 | Msa1331510:exon | 15.0% |
| !! | TTTATTCTGTAATTATATTC+TGG | + | chr8_4:51060473-51060492 | Msa1331510:three_prime_UTR | 15.0% |
| !! | AATCAAAATGAAATCATGAT+TGG | - | chr8_4:51056982-51057001 | None:intergenic | 20.0% |
| !!! | ATTGTGTTTTTTGTTTGTAT+AGG | + | chr8_4:51057024-51057043 | Msa1331510:intron | 20.0% |
| !!! | AAAACAGTTTGACTATATTT+TGG | + | chr8_4:51057757-51057776 | Msa1331510:intron | 20.0% |
| !! | TAAAATAAGCTAATCCAAAT+GGG | + | chr8_4:51057973-51057992 | Msa1331510:intron | 20.0% |
| !! | AATTGTATGCTATTATATAC+TGG | + | chr8_4:51058226-51058245 | Msa1331510:intron | 20.0% |
| !!! | GGAGGATTTTTTTTTTTTTA+TGG | - | chr8_4:51058271-51058290 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAATCCTCCTT+AGG | + | chr8_4:51058273-51058292 | Msa1331510:intron | 20.0% |
| !!! | AATCATAAGCATTAGTTTAT+GGG | - | chr8_4:51058970-51058989 | None:intergenic | 20.0% |
| !! | CATTAACTAAAAAGTTGTAT+TGG | - | chr8_4:51059073-51059092 | None:intergenic | 20.0% |
| !!! | ATACAACTTTTTAGTTAATG+AGG | + | chr8_4:51059073-51059092 | Msa1331510:intron | 20.0% |
| !!! | TATATTTTCCTTGATAATTG+TGG | + | chr8_4:51059353-51059372 | Msa1331510:intron | 20.0% |
| !! | CTTATCTAAATAAGTCAATA+TGG | + | chr8_4:51059469-51059488 | Msa1331510:intron | 20.0% |
| !! | TAAAATATTCAATGAACACA+AGG | - | chr8_4:51059497-51059516 | None:intergenic | 20.0% |
| ! | ATGAAATCATGATTGGAAAT+TGG | - | chr8_4:51056975-51056994 | None:intergenic | 25.0% |
| ! | TAACTCTTCAAATGCTTAAT+AGG | + | chr8_4:51057384-51057403 | Msa1331510:intron | 25.0% |
| ! | AACTCTTCAAATGCTTAATA+GGG | + | chr8_4:51057385-51057404 | Msa1331510:intron | 25.0% |
| !! | TTTGCTATGGTATTTCATTT+AGG | + | chr8_4:51057463-51057482 | Msa1331510:intron | 25.0% |
| ! | TTGCTATGGTATTTCATTTA+GGG | + | chr8_4:51057464-51057483 | Msa1331510:intron | 25.0% |
| !! | TATTTCATTTAGGGTATGTT+TGG | + | chr8_4:51057473-51057492 | Msa1331510:intron | 25.0% |
| ! | AATTAACTAAAAACGGCTTA+TGG | - | chr8_4:51057585-51057604 | None:intergenic | 25.0% |
| ! | CTAAAATAAGCTAATCCAAA+TGG | + | chr8_4:51057972-51057991 | Msa1331510:intron | 25.0% |
| ! | AATACAAAATCCCCTTAATT+TGG | + | chr8_4:51058404-51058423 | Msa1331510:intron | 25.0% |
| !!! | TTTTAGAGAATGATAACCTA+AGG | + | chr8_4:51058758-51058777 | Msa1331510:intron | 25.0% |
| !! | TACAAATAAGCATTTTCCTT+AGG | - | chr8_4:51058777-51058796 | None:intergenic | 25.0% |
| ! | AAGGAAAATGCTTATTTGTA+CGG | + | chr8_4:51058777-51058796 | Msa1331510:intron | 25.0% |
| !! | AAACATAACAATCACGATTT+TGG | - | chr8_4:51058873-51058892 | None:intergenic | 25.0% |
| !! | GAATCATAAGCATTAGTTTA+TGG | - | chr8_4:51058971-51058990 | None:intergenic | 25.0% |
| ! | TAACTAAAAAGTTGTATTGG+AGG | - | chr8_4:51059070-51059089 | None:intergenic | 25.0% |
| !!! | AACTTTTTAGTTAATGAGGA+GGG | + | chr8_4:51059077-51059096 | Msa1331510:intron | 25.0% |
| ! | ATTTGTAACCACAATTATCA+AGG | - | chr8_4:51059364-51059383 | None:intergenic | 25.0% |
| ! | TTAGATAAGTCAATAAGATG+AGG | - | chr8_4:51059458-51059477 | None:intergenic | 25.0% |
| !!! | TGTTTCAATTTTGGAAAACT+AGG | - | chr8_4:51059917-51059936 | None:intergenic | 25.0% |
| !! | AGTTTTCCAAAATTGAAACA+TGG | + | chr8_4:51059917-51059936 | Msa1331510:intron | 25.0% |
| !! | AGAAATCCATGTTTCAATTT+TGG | - | chr8_4:51059926-51059945 | None:intergenic | 25.0% |
| ! | TTATTGAGTGAAATTCATGT+TGG | + | chr8_4:51059977-51059996 | Msa1331510:intron | 25.0% |
| !! | AGTGTTGGAAAAAATGTTAA+GGG | - | chr8_4:51060033-51060052 | None:intergenic | 25.0% |
| !! | TAGTGTTGGAAAAAATGTTA+AGG | - | chr8_4:51060034-51060053 | None:intergenic | 25.0% |
| ! | ATTTCACTCAATAATAGTGT+TGG | - | chr8_4:51060048-51060067 | None:intergenic | 25.0% |
| !! | AATGTTAGAGTAAGTATTGT+TGG | + | chr8_4:51060158-51060177 | Msa1331510:intron | 25.0% |
| ! | GTATTTGTAGTATTCATGTA+TGG | + | chr8_4:51060197-51060216 | Msa1331510:intron | 25.0% |
| ! | ATTCATGTATGGATATTCTA+TGG | + | chr8_4:51060208-51060227 | Msa1331510:intron | 25.0% |
| ! | AAGTATTTCAGTTTACGAAA+AGG | + | chr8_4:51060641-51060660 | Msa1331510:three_prime_UTR | 25.0% |
| ! | TTTGTTTGTATAGGCGATTT+TGG | + | chr8_4:51057033-51057052 | Msa1331510:intron | 30.0% |
| TTGATGAAAAATGTTCTTCC+TGG | + | chr8_4:51057250-51057269 | Msa1331510:CDS | 30.0% | |
| CCATAGCAAAAACTATATAG+TGG | - | chr8_4:51057453-51057472 | None:intergenic | 30.0% | |
| ! | CCACTATATAGTTTTTGCTA+TGG | + | chr8_4:51057450-51057469 | Msa1331510:intron | 30.0% |
| !!! | CAATTTTGGTTTCCAAACAT+AGG | - | chr8_4:51057632-51057651 | None:intergenic | 30.0% |
| CAAAATAAGCTCAATCCAAA+CGG | - | chr8_4:51057785-51057804 | None:intergenic | 30.0% | |
| AAGCACTTATATAGTAAGAG+AGG | + | chr8_4:51058160-51058179 | Msa1331510:intron | 30.0% | |
| !! | GAGGGTTTTTAAAAAAAGGA+AGG | + | chr8_4:51058318-51058337 | Msa1331510:intron | 30.0% |
| TAAAAAAAGGAAGGAAGAAG+TGG | + | chr8_4:51058327-51058346 | Msa1331510:intron | 30.0% | |
| ! | TTTTCGTTCCTCCAAATTAA+GGG | - | chr8_4:51058418-51058437 | None:intergenic | 30.0% |
| ! | TTTTTCGTTCCTCCAAATTA+AGG | - | chr8_4:51058419-51058438 | None:intergenic | 30.0% |
| GAGGAACGAAAAAATTGTAT+TGG | + | chr8_4:51058426-51058445 | Msa1331510:intron | 30.0% | |
| GAACGAAAAAATTGTATTGG+AGG | + | chr8_4:51058429-51058448 | Msa1331510:intron | 30.0% | |
| TAAAAAGTTGTATTGGAGGA+GGG | - | chr8_4:51059066-51059085 | None:intergenic | 30.0% | |
| !!! | CAACTTTTTAGTTAATGAGG+AGG | + | chr8_4:51059076-51059095 | Msa1331510:intron | 30.0% |
| TGGAAGAAATAGAGTACATT+GGG | - | chr8_4:51059148-51059167 | None:intergenic | 30.0% | |
| AAAGCCTTAGAAACTGATAA+GGG | + | chr8_4:51059225-51059244 | Msa1331510:intron | 30.0% | |
| ! | TCGAACTGTTTAGAATTGTT+TGG | + | chr8_4:51059393-51059412 | Msa1331510:intron | 30.0% |
| ATCAACGATATATTGGAAGT+CGG | - | chr8_4:51059595-51059614 | None:intergenic | 30.0% | |
| CATGTACATCAACGATATAT+TGG | - | chr8_4:51059602-51059621 | None:intergenic | 30.0% | |
| ! | TCACTCAATAATAAGAGTGT+AGG | - | chr8_4:51059968-51059987 | None:intergenic | 30.0% |
| GAAATTCATGTTGGCATAAA+AGG | + | chr8_4:51059986-51060005 | Msa1331510:intron | 30.0% | |
| ! | AAGTCTCATCACTTTGAAAA+CGG | + | chr8_4:51060074-51060093 | Msa1331510:intron | 30.0% |
| TTATTGGATGAAAGTCATGT+GGG | - | chr8_4:51060121-51060140 | None:intergenic | 30.0% | |
| TCTTTCTATCTCTCTCTTAT+TGG | - | chr8_4:51060137-51060156 | None:intergenic | 30.0% | |
| AGTATTGTTGGTACTTTCAT+CGG | + | chr8_4:51060170-51060189 | Msa1331510:intron | 30.0% | |
| ACAGGAACTTATATTGCATT+AGG | - | chr8_4:51060313-51060332 | None:intergenic | 30.0% | |
| TTATGCTTCAAATAGGAACA+TGG | + | chr8_4:51060427-51060446 | Msa1331510:three_prime_UTR | 30.0% | |
| ! | CTGGAGTTTTACAAGAAATT+TGG | + | chr8_4:51060492-51060511 | Msa1331510:three_prime_UTR | 30.0% |
| AATGCAGAACTCAATTGGAA+TGG | + | chr8_4:51056711-51056730 | Msa1331510:exon | 35.0% | |
| ! | AATGTTCTTTCGGTTTGTTC+GGG | - | chr8_4:51056901-51056920 | None:intergenic | 35.0% |
| ! | GAATGTTCTTTCGGTTTGTT+CGG | - | chr8_4:51056902-51056921 | None:intergenic | 35.0% |
| TCGATCGAAGAATGTTCTTT+CGG | - | chr8_4:51056911-51056930 | None:intergenic | 35.0% | |
| !! | TTTGTATAGGCGATTTTGGT+AGG | + | chr8_4:51057037-51057056 | Msa1331510:intron | 35.0% |
| !!! | CTTTTGAGTTTCTTCTGCAA+CGG | - | chr8_4:51057079-51057098 | None:intergenic | 35.0% |
| TTGCAGAAGAAACTCAAAAG+TGG | + | chr8_4:51057079-51057098 | Msa1331510:CDS | 35.0% | |
| TTTGGATCATGAAAACCCTA+GGG | + | chr8_4:51057159-51057178 | Msa1331510:CDS | 35.0% | |
| ATCGATTAGCATATTCCCTA+GGG | - | chr8_4:51057177-51057196 | None:intergenic | 35.0% | |
| TACTGTTTATCCAGAGAGAT+TGG | + | chr8_4:51057219-51057238 | Msa1331510:CDS | 35.0% | |
| ACTGTTTATCCAGAGAGATT+GGG | + | chr8_4:51057220-51057239 | Msa1331510:CDS | 35.0% | |
| AAAAGATTTCCCAATCTCTC+TGG | - | chr8_4:51057232-51057251 | None:intergenic | 35.0% | |
| TCAACATACAAAGTTGAACC+AGG | - | chr8_4:51057271-51057290 | None:intergenic | 35.0% | |
| TGGTTCAACTTTGTATGTTG+AGG | + | chr8_4:51057270-51057289 | Msa1331510:CDS | 35.0% | |
| GGTTCAACTTTGTATGTTGA+GGG | + | chr8_4:51057271-51057290 | Msa1331510:CDS | 35.0% | |
| TGAGGGAAATCTTGAAACTA+AGG | + | chr8_4:51057288-51057307 | Msa1331510:CDS | 35.0% | |
| ! | TATTCTAGAGAGCTAGCTTA+TGG | + | chr8_4:51057541-51057560 | Msa1331510:intron | 35.0% |
| !! | TGTTTGTTTCTGCGTCAAAA+TGG | - | chr8_4:51057706-51057725 | None:intergenic | 35.0% |
| ! | GCTAAAAGTTGTTTCCATAG+TGG | - | chr8_4:51057730-51057749 | None:intergenic | 35.0% |
| !! | AGGGGAGGGTTTTTAAAAAA+AGG | + | chr8_4:51058314-51058333 | Msa1331510:intron | 35.0% |
| ! | ACAAAATCCCCTTAATTTGG+AGG | + | chr8_4:51058407-51058426 | Msa1331510:intron | 35.0% |
| TTTCGTTCCTCCAAATTAAG+GGG | - | chr8_4:51058417-51058436 | None:intergenic | 35.0% | |
| CGAAAAAATTGTATTGGAGG+AGG | + | chr8_4:51058432-51058451 | Msa1331510:intron | 35.0% | |
| ATGCTTATTTGTACGGAAGT+TGG | + | chr8_4:51058784-51058803 | Msa1331510:intron | 35.0% | |
| ! | CATAACAATCACGATTTTGG+TGG | - | chr8_4:51058870-51058889 | None:intergenic | 35.0% |
| CTAAAAAGTTGTATTGGAGG+AGG | - | chr8_4:51059067-51059086 | None:intergenic | 35.0% | |
| AGAAATAGAGTACATTGGGA+GGG | - | chr8_4:51059144-51059163 | None:intergenic | 35.0% | |
| AAGAAATAGAGTACATTGGG+AGG | - | chr8_4:51059145-51059164 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGTACAT+TGG | - | chr8_4:51059149-51059168 | None:intergenic | 35.0% | |
| GGAAAAAAAGAAGGAACAAG+TGG | - | chr8_4:51059168-51059187 | None:intergenic | 35.0% | |
| !!! | GAGGGTTTTGGAAAAAAAGA+AGG | - | chr8_4:51059177-51059196 | None:intergenic | 35.0% |
| !! | TAAGGCTTTGTTTGTGAGTT+TGG | - | chr8_4:51059214-51059233 | None:intergenic | 35.0% |
| CAAAGCCTTAGAAACTGATA+AGG | + | chr8_4:51059224-51059243 | Msa1331510:intron | 35.0% | |
| AGTCCCTTTATATTTGCCAA+AGG | + | chr8_4:51059295-51059314 | Msa1331510:intron | 35.0% | |
| ! | AGTCATCAGATAAGGCTTTT+GGG | - | chr8_4:51059321-51059340 | None:intergenic | 35.0% |
| ! | AAGTCATCAGATAAGGCTTT+TGG | - | chr8_4:51059322-51059341 | None:intergenic | 35.0% |
| GCAAATCAAGTCATCAGATA+AGG | - | chr8_4:51059329-51059348 | None:intergenic | 35.0% | |
| ! | GAATTGTTTGGTGAGTAATG+TGG | + | chr8_4:51059405-51059424 | Msa1331510:intron | 35.0% |
| ATATTCAGCGAGTTATGATC+AGG | + | chr8_4:51059516-51059535 | Msa1331510:intron | 35.0% | |
| TCAACGATATATTGGAAGTC+GGG | - | chr8_4:51059594-51059613 | None:intergenic | 35.0% | |
| GCTTTCTTAGTTCAACTCAA+TGG | - | chr8_4:51059820-51059839 | None:intergenic | 35.0% | |
| TGACAAGTACAGATCAGTAA+TGG | - | chr8_4:51059883-51059902 | None:intergenic | 35.0% | |
| ! | AGTCTCATCACTTTGAAAAC+GGG | + | chr8_4:51060075-51060094 | Msa1331510:intron | 35.0% |
| TGGGTTCTACTACATTACTT+GGG | - | chr8_4:51060102-51060121 | None:intergenic | 35.0% | |
| CTTATTGGATGAAAGTCATG+TGG | - | chr8_4:51060122-51060141 | None:intergenic | 35.0% | |
| TAAAAATACAACACGACCTG+GGG | - | chr8_4:51060339-51060358 | None:intergenic | 35.0% | |
| CTAAAAATACAACACGACCT+GGG | - | chr8_4:51060340-51060359 | None:intergenic | 35.0% | |
| !!! | TCGTGTTGTATTTTTAGGTC+CGG | + | chr8_4:51060343-51060362 | Msa1331510:CDS | 35.0% |
| !! | TTTTGTTGTGTCTGTTGCTT+AGG | - | chr8_4:51060377-51060396 | None:intergenic | 35.0% |
| AATAGGAACATGGATTCAGT+TGG | + | chr8_4:51060437-51060456 | Msa1331510:three_prime_UTR | 35.0% | |
| ! | CTTTTGTGCTTTGTAACACA+AGG | + | chr8_4:51060566-51060585 | Msa1331510:three_prime_UTR | 35.0% |
| ATCAACTTTCTTGCGTGTTA+TGG | + | chr8_4:51060598-51060617 | Msa1331510:three_prime_UTR | 35.0% | |
| !!! | AGAGTTTTGAACAGGATGAA+AGG | - | chr8_4:51060686-51060705 | None:intergenic | 35.0% |
| GAAAAGCAAAGAGCGATAGA+GGG | - | chr8_4:51056764-51056783 | None:intergenic | 40.0% | |
| TGAAAAGCAAAGAGCGATAG+AGG | - | chr8_4:51056765-51056784 | None:intergenic | 40.0% | |
| GAAACTCAAAAGTGGAACTG+TGG | + | chr8_4:51057087-51057106 | Msa1331510:CDS | 40.0% | |
| GTGGTTACTCTGCTTTCAAT+TGG | + | chr8_4:51057106-51057125 | Msa1331510:CDS | 40.0% | |
| ACTCTGCTTTCAATTGGAAC+CGG | + | chr8_4:51057112-51057131 | Msa1331510:CDS | 40.0% | |
| TCGATTATTGCGAATTCCTC+CGG | - | chr8_4:51057134-51057153 | None:intergenic | 40.0% | |
| TCGCAATAATCGAAGACCTT+TGG | + | chr8_4:51057141-51057160 | Msa1331510:CDS | 40.0% | |
| ! | CTAGGGTTTTCATGATCCAA+AGG | - | chr8_4:51057160-51057179 | None:intergenic | 40.0% |
| CTTTGGATCATGAAAACCCT+AGG | + | chr8_4:51057158-51057177 | Msa1331510:CDS | 40.0% | |
| ! | CATCGATTAGCATATTCCCT+AGG | - | chr8_4:51057178-51057197 | None:intergenic | 40.0% |
| ! | GTGTTTTCTGATCCTGTTAC+TGG | + | chr8_4:51057310-51057329 | Msa1331510:CDS | 40.0% |
| CTGTAATAGCTGCCTATGTT+TGG | + | chr8_4:51057617-51057636 | Msa1331510:intron | 40.0% | |
| GCAGAAACAAACAACCACTA+TGG | + | chr8_4:51057713-51057732 | Msa1331510:intron | 40.0% | |
| !!! | GACTATATTTTGGCTCCGTT+TGG | + | chr8_4:51057767-51057786 | Msa1331510:intron | 40.0% |
| CAAAAGATAAAGGGCCCATT+TGG | - | chr8_4:51057990-51058009 | None:intergenic | 40.0% | |
| ATAGCATACGATTGAGCAGT+AGG | - | chr8_4:51058090-51058109 | None:intergenic | 40.0% | |
| TTGAGCTGTAGATGTGTGTA+GGG | - | chr8_4:51058208-51058227 | None:intergenic | 40.0% | |
| ATTGAGCTGTAGATGTGTGT+AGG | - | chr8_4:51058209-51058228 | None:intergenic | 40.0% | |
| GAAGGAAGAAGTGGAAAGAA+TGG | + | chr8_4:51058336-51058355 | Msa1331510:intron | 40.0% | |
| AGAATGGAGAGATATGAGAG+TGG | + | chr8_4:51058352-51058371 | Msa1331510:intron | 40.0% | |
| ! | ATATGAGAGTGGAGGGTTTT+GGG | + | chr8_4:51058363-51058382 | Msa1331510:intron | 40.0% |
| ATTGTATTGGAGGAGGAGTT+TGG | + | chr8_4:51058439-51058458 | Msa1331510:intron | 40.0% | |
| !! | TTTTGGAGGGATGAGTTTAG+AGG | - | chr8_4:51058612-51058631 | None:intergenic | 40.0% |
| TTTGGGGGTGGAAAATAAAG+AGG | + | chr8_4:51058697-51058716 | Msa1331510:intron | 40.0% | |
| TTGGGGGTGGAAAATAAAGA+GGG | + | chr8_4:51058698-51058717 | Msa1331510:intron | 40.0% | |
| !! | CACGATTTTGGTGGAAAACA+CGG | - | chr8_4:51058861-51058880 | None:intergenic | 40.0% |
| GTGTCAAGTGTTTATAGGCA+AGG | - | chr8_4:51058896-51058915 | None:intergenic | 40.0% | |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr8_4:51059059-51059078 | None:intergenic | 40.0% |
| GAAATAGAGTACATTGGGAG+GGG | - | chr8_4:51059143-51059162 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGTGAGTTTGGA+GGG | - | chr8_4:51059210-51059229 | None:intergenic | 40.0% |
| CCTTCCCTTATCAGTTTCTA+AGG | - | chr8_4:51059232-51059251 | None:intergenic | 40.0% | |
| CCTTAGAAACTGATAAGGGA+AGG | + | chr8_4:51059229-51059248 | Msa1331510:intron | 40.0% | |
| GGGCCTTTGGCAAATATAAA+GGG | - | chr8_4:51059301-51059320 | None:intergenic | 40.0% | |
| TGGGCCTTTGGCAAATATAA+AGG | - | chr8_4:51059302-51059321 | None:intergenic | 40.0% | |
| TGTGTGTTCTACTGCTTGTT+TGG | + | chr8_4:51059786-51059805 | Msa1331510:intron | 40.0% | |
| GAACTAAGAAAGCTCAAGCT+TGG | + | chr8_4:51059827-51059846 | Msa1331510:intron | 40.0% | |
| GTGGGTTCTACTACATTACT+TGG | - | chr8_4:51060103-51060122 | None:intergenic | 40.0% | |
| ! | TATAAGTTCCTGTTTTCCCC+AGG | + | chr8_4:51060320-51060339 | Msa1331510:intron | 40.0% |
| CCTAAAAATACAACACGACC+TGG | - | chr8_4:51060341-51060360 | None:intergenic | 40.0% | |
| ! | CCAGGTCGTGTTGTATTTTT+AGG | + | chr8_4:51060338-51060357 | Msa1331510:intron | 40.0% |
| !!! | CGTGTTGTATTTTTAGGTCC+GGG | + | chr8_4:51060344-51060363 | Msa1331510:CDS | 40.0% |
| AATAATAGCCAACTGCTCTC+AGG | - | chr8_4:51060403-51060422 | None:intergenic | 40.0% | |
| AACATGGATTCAGTTGGCAA+TGG | + | chr8_4:51060443-51060462 | Msa1331510:three_prime_UTR | 40.0% | |
| AACTTTCTTGCGTGTTATGG+TGG | + | chr8_4:51060601-51060620 | Msa1331510:three_prime_UTR | 40.0% | |
| ! | TACGAAAAGGACTTTTGCTC+TGG | + | chr8_4:51060654-51060673 | Msa1331510:three_prime_UTR | 40.0% |
| ! | ACGAAAAGGACTTTTGCTCT+GGG | + | chr8_4:51060655-51060674 | Msa1331510:three_prime_UTR | 40.0% |
| CGCAGAATGCAGAACTCAAT+TGG | + | chr8_4:51056706-51056725 | Msa1331510:exon | 45.0% | |
| TTCGATCGACCCCTTGAAAA+CGG | + | chr8_4:51056922-51056941 | Msa1331510:CDS | 45.0% | |
| TTGGATTACCCTGTAAACGC+CGG | - | chr8_4:51056956-51056975 | None:intergenic | 45.0% | |
| !! | GCGATTTTGGTAGGTAAAGC+TGG | + | chr8_4:51057046-51057065 | Msa1331510:CDS | 45.0% |
| ! | CTAATCGATGTGCTGTTCAG+TGG | + | chr8_4:51057188-51057207 | Msa1331510:intron | 45.0% |
| ! | ATGTGCTGTTCAGTGGCATA+GGG | + | chr8_4:51057195-51057214 | Msa1331510:intron | 45.0% |
| ! | GAAGTTGCTGTTCGTCGAAA+TGG | + | chr8_4:51057352-51057371 | Msa1331510:CDS | 45.0% |
| ! | CGTGCATTGGGATGCAATTT+TGG | - | chr8_4:51057646-51057665 | None:intergenic | 45.0% |
| ATTGCATCCCAATGCACGTT+TGG | + | chr8_4:51057648-51057667 | Msa1331510:intron | 45.0% | |
| ATCACAGCCAAACGTGCATT+GGG | - | chr8_4:51057658-51057677 | None:intergenic | 45.0% | |
| AATCACAGCCAAACGTGCAT+TGG | - | chr8_4:51057659-51057678 | None:intergenic | 45.0% | |
| ! | GCACGTTTGGCTGTGATTTT+AGG | + | chr8_4:51057661-51057680 | Msa1331510:intron | 45.0% |
| TCTGCGTCAAAATGGAAGCA+AGG | - | chr8_4:51057698-51057717 | None:intergenic | 45.0% | |
| AATCCTCCTTAGGCTCTGTT+TGG | + | chr8_4:51058283-51058302 | Msa1331510:intron | 45.0% | |
| ATCCTCCTTAGGCTCTGTTT+GGG | + | chr8_4:51058284-51058303 | Msa1331510:intron | 45.0% | |
| TAACTCCCAAACAGAGCCTA+AGG | - | chr8_4:51058292-51058311 | None:intergenic | 45.0% | |
| GCTCTGTTTGGGAGTTATGA+GGG | + | chr8_4:51058295-51058314 | Msa1331510:intron | 45.0% | |
| CTCTGTTTGGGAGTTATGAG+GGG | + | chr8_4:51058296-51058315 | Msa1331510:intron | 45.0% | |
| ATGGAGAGATATGAGAGTGG+AGG | + | chr8_4:51058355-51058374 | Msa1331510:intron | 45.0% | |
| TGGAGAGATATGAGAGTGGA+GGG | + | chr8_4:51058356-51058375 | Msa1331510:intron | 45.0% | |
| ! | GATATGAGAGTGGAGGGTTT+TGG | + | chr8_4:51058362-51058381 | Msa1331510:intron | 45.0% |
| TATTGGAGGAGGAGTTTGGA+GGG | + | chr8_4:51058443-51058462 | Msa1331510:intron | 45.0% | |
| TAAGGCTCTGTTTGGGAGTT+TGG | - | chr8_4:51058644-51058663 | None:intergenic | 45.0% | |
| AAACTCCCAAACAGAGCCTT+AGG | + | chr8_4:51058643-51058662 | Msa1331510:intron | 45.0% | |
| AACTCCCAAACAGAGCCTTA+GGG | + | chr8_4:51058644-51058663 | Msa1331510:intron | 45.0% | |
| AAAGCCCTAAGGCTCTGTTT+GGG | - | chr8_4:51058651-51058670 | None:intergenic | 45.0% | |
| !! | GATTTTGGTGGAAAACACGG+AGG | - | chr8_4:51058858-51058877 | None:intergenic | 45.0% |
| GCCTATAAACACTTGACACG+TGG | + | chr8_4:51058897-51058916 | Msa1331510:intron | 45.0% | |
| GCCACGTGTCAAGTGTTTAT+AGG | - | chr8_4:51058901-51058920 | None:intergenic | 45.0% | |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr8_4:51059058-51059077 | None:intergenic | 45.0% |
| ! | GTTGTATTGGAGGAGGGTTT+TGG | - | chr8_4:51059060-51059079 | None:intergenic | 45.0% |
| TTTGTGAGTTTGGAGGGAAC+GGG | - | chr8_4:51059204-51059223 | None:intergenic | 45.0% | |
| GTTTGTGAGTTTGGAGGGAA+CGG | - | chr8_4:51059205-51059224 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGTGAGTTTGG+AGG | - | chr8_4:51059211-51059230 | None:intergenic | 45.0% |
| ! | AGATAAGGCTTTTGGGCCTT+TGG | - | chr8_4:51059314-51059333 | None:intergenic | 45.0% |
| ! | TGTTGCTTAGGATCATCACC+CGG | - | chr8_4:51060365-51060384 | None:intergenic | 45.0% |
| CAAAATGACCTGAGAGCAGT+TGG | + | chr8_4:51060392-51060411 | Msa1331510:CDS | 45.0% | |
| !!! | GTATTATTTATAAATTTTTA+AGG | - | chr8_4:51057911-51057930 | None:intergenic | 5.0% |
| !!! | TTTATATTTTTTAATTTCAA+AGG | - | chr8_4:51059632-51059651 | None:intergenic | 5.0% |
| AAGCAAAGAGCGATAGAGGG+TGG | - | chr8_4:51056761-51056780 | None:intergenic | 50.0% | |
| AGCATCGTCGGAATCGGAAA+GGG | - | chr8_4:51056854-51056873 | None:intergenic | 50.0% | |
| TGAGTCAGCATCGTCGGAAT+CGG | - | chr8_4:51056860-51056879 | None:intergenic | 50.0% | |
| ! | CTTTCGGTTTGTTCGGGTGA+GGG | - | chr8_4:51056895-51056914 | None:intergenic | 50.0% |
| ! | TCTTTCGGTTTGTTCGGGTG+AGG | - | chr8_4:51056896-51056915 | None:intergenic | 50.0% |
| TGGATTACCCTGTAAACGCC+GGG | - | chr8_4:51056955-51056974 | None:intergenic | 50.0% | |
| CTGCTTTCAATTGGAACCGG+AGG | + | chr8_4:51057115-51057134 | Msa1331510:CDS | 50.0% | |
| ! | GATGTGCTGTTCAGTGGCAT+AGG | + | chr8_4:51057194-51057213 | Msa1331510:intron | 50.0% |
| CGACGAACAAGACCAGTAAC+AGG | - | chr8_4:51057325-51057344 | None:intergenic | 50.0% | |
| TTGAGCAGTAGGTGTGCGTA+GGG | - | chr8_4:51058079-51058098 | None:intergenic | 50.0% | |
| ATTGAGCAGTAGGTGTGCGT+AGG | - | chr8_4:51058080-51058099 | None:intergenic | 50.0% | |
| CTGTAGATGTGTGTAGGGAG+AGG | - | chr8_4:51058203-51058222 | None:intergenic | 50.0% | |
| GGCTCTGTTTGGGAGTTATG+AGG | + | chr8_4:51058294-51058313 | Msa1331510:intron | 50.0% | |
| TGTTTGGGAGTTATGAGGGG+AGG | + | chr8_4:51058299-51058318 | Msa1331510:intron | 50.0% | |
| GTTTGGGAGTTATGAGGGGA+GGG | + | chr8_4:51058300-51058319 | Msa1331510:intron | 50.0% | |
| GTATTGGAGGAGGAGTTTGG+AGG | + | chr8_4:51058442-51058461 | Msa1331510:intron | 50.0% | |
| ! | AGGAGGAGTTTGGAGGGTTT+TGG | + | chr8_4:51058449-51058468 | Msa1331510:intron | 50.0% |
| ! | GGAGGAGTTTGGAGGGTTTT+GGG | + | chr8_4:51058450-51058469 | Msa1331510:intron | 50.0% |
| ! | GAGGAGTTTGGAGGGTTTTG+GGG | + | chr8_4:51058451-51058470 | Msa1331510:intron | 50.0% |
| !! | AGGAGTTTGGAGGGTTTTGG+GGG | + | chr8_4:51058452-51058471 | Msa1331510:intron | 50.0% |
| CTCTGTTTGGGAGTTTGGAG+GGG | - | chr8_4:51058639-51058658 | None:intergenic | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | - | chr8_4:51058640-51058659 | None:intergenic | 50.0% | |
| CAAAGCCCTAAGGCTCTGTT+TGG | - | chr8_4:51058652-51058671 | None:intergenic | 50.0% | |
| !! | CAGAGCCTTAGGGCTTTGTT+TGG | + | chr8_4:51058654-51058673 | Msa1331510:intron | 50.0% |
| !! | AGCCTTAGGGCTTTGTTTGG+AGG | + | chr8_4:51058657-51058676 | Msa1331510:intron | 50.0% |
| !! | GCCTTAGGGCTTTGTTTGGA+GGG | + | chr8_4:51058658-51058677 | Msa1331510:intron | 50.0% |
| !! | CCTTAGGGCTTTGTTTGGAG+GGG | + | chr8_4:51058659-51058678 | Msa1331510:intron | 50.0% |
| GAGGTGTGGGTGGAAATCAA+AGG | - | chr8_4:51058839-51058858 | None:intergenic | 50.0% | |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | - | chr8_4:51059056-51059075 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr8_4:51059057-51059076 | None:intergenic | 50.0% |
| !!! | TTGGGAGGGGAGGGTTTTTT+GGG | - | chr8_4:51059130-51059149 | None:intergenic | 50.0% |
| !!! | ATTGGGAGGGGAGGGTTTTT+TGG | - | chr8_4:51059131-51059150 | None:intergenic | 50.0% |
| TAGAGTACATTGGGAGGGGA+GGG | - | chr8_4:51059139-51059158 | None:intergenic | 50.0% | |
| ATAGAGTACATTGGGAGGGG+AGG | - | chr8_4:51059140-51059159 | None:intergenic | 50.0% | |
| AGAAGCGGAGAGGAATGTGG+CGG | - | chr8_4:51056813-51056832 | None:intergenic | 55.0% | |
| TGCAGAAGCGGAGAGGAATG+TGG | - | chr8_4:51056816-51056835 | None:intergenic | 55.0% | |
| ATCGTCGGAATCGGAAAGGG+AGG | - | chr8_4:51056851-51056870 | None:intergenic | 55.0% | |
| CAGCATCGTCGGAATCGGAA+AGG | - | chr8_4:51056855-51056874 | None:intergenic | 55.0% | |
| AGCTGCTGAGTCAGCATCGT+CGG | - | chr8_4:51056866-51056885 | None:intergenic | 55.0% | |
| GTTTGTTCGGGTGAGGGAGA+AGG | - | chr8_4:51056889-51056908 | None:intergenic | 55.0% | |
| !! | GGATCGAGGCCGTTTTCAAG+GGG | - | chr8_4:51056934-51056953 | None:intergenic | 55.0% |
| !! | GGGATCGAGGCCGTTTTCAA+GGG | - | chr8_4:51056935-51056954 | None:intergenic | 55.0% |
| CTTGAAAACGGCCTCGATCC+CGG | + | chr8_4:51056934-51056953 | Msa1331510:CDS | 55.0% | |
| CTCCCAAACAGAGCCTAAGG+AGG | - | chr8_4:51058289-51058308 | None:intergenic | 55.0% | |
| !!! | TGAGAGTGGAGGGTTTTGGG+AGG | + | chr8_4:51058366-51058385 | Msa1331510:intron | 55.0% |
| !!! | GGAGTTTGGAGGGTTTTGGG+GGG | + | chr8_4:51058453-51058472 | Msa1331510:intron | 55.0% |
| !!! | TTGGAGGGTTTTGGGGGGTT+TGG | + | chr8_4:51058458-51058477 | Msa1331510:intron | 55.0% |
| !!! | TGGAGGGTTTTGGGGGGTTT+GGG | + | chr8_4:51058459-51058478 | Msa1331510:intron | 55.0% |
| !!! | TTGGAGGGGAGGGTTTTGGA+GGG | - | chr8_4:51058625-51058644 | None:intergenic | 55.0% |
| !! | TTTGGAGGGGAGGGTTTTGG+AGG | - | chr8_4:51058626-51058645 | None:intergenic | 55.0% |
| ! | GAGTTTGGAGGGGAGGGTTT+TGG | - | chr8_4:51058629-51058648 | None:intergenic | 55.0% |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr8_4:51058635-51058654 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr8_4:51058636-51058655 | None:intergenic | 55.0% | |
| GGCTCTGTTTGGGAGTTTGG+AGG | - | chr8_4:51058641-51058660 | None:intergenic | 55.0% | |
| CCCCTCCAAACAAAGCCCTA+AGG | - | chr8_4:51058662-51058681 | None:intergenic | 55.0% | |
| !! | TAGGGCTTTGTTTGGAGGGG+AGG | + | chr8_4:51058662-51058681 | Msa1331510:intron | 55.0% |
| !! | AGGGCTTTGTTTGGAGGGGA+GGG | + | chr8_4:51058663-51058682 | Msa1331510:intron | 55.0% |
| TTTGTTTGGAGGGGAGGGGA+AGG | + | chr8_4:51058668-51058687 | Msa1331510:intron | 55.0% | |
| TTGTTTGGAGGGGAGGGGAA+GGG | + | chr8_4:51058669-51058688 | Msa1331510:intron | 55.0% | |
| GGAGGGGAAGGGAAGACTTT+GGG | + | chr8_4:51058680-51058699 | Msa1331510:intron | 55.0% | |
| GAGGGGAAGGGAAGACTTTG+GGG | + | chr8_4:51058681-51058700 | Msa1331510:intron | 55.0% | |
| AGGGGAAGGGAAGACTTTGG+GGG | + | chr8_4:51058682-51058701 | Msa1331510:intron | 55.0% | |
| ! | GGTGGAAAACACGGAGGTGT+GGG | - | chr8_4:51058852-51058871 | None:intergenic | 55.0% |
| TGGTGGAAAACACGGAGGTG+TGG | - | chr8_4:51058853-51058872 | None:intergenic | 55.0% | |
| !!! | TGGGAGGGGAGGGTTTTTTG+GGG | - | chr8_4:51059129-51059148 | None:intergenic | 55.0% |
| TGAGTTTGGAGGGAACGGGA+GGG | - | chr8_4:51059200-51059219 | None:intergenic | 55.0% | |
| CAACACGACCTGGGGAAAAC+AGG | - | chr8_4:51060331-51060350 | None:intergenic | 55.0% | |
| ! | ATGTGGCGGTGGTGGTGTAG+AGG | - | chr8_4:51056799-51056818 | None:intergenic | 60.0% |
| ! | TGGTCGTGGTGGTGCAGAAG+CGG | - | chr8_4:51056828-51056847 | None:intergenic | 60.0% |
| ATCGGAAAGGGAGGTGGTCG+TGG | - | chr8_4:51056842-51056861 | None:intergenic | 60.0% | |
| GTCGGAATCGGAAAGGGAGG+TGG | - | chr8_4:51056848-51056867 | None:intergenic | 60.0% | |
| !! | CGGGATCGAGGCCGTTTTCA+AGG | - | chr8_4:51056936-51056955 | None:intergenic | 60.0% |
| CCTCGATCCCGGCGTTTACA+GGG | + | chr8_4:51056945-51056964 | Msa1331510:CDS | 60.0% | |
| AGTAGGTGTGCGTAGGGAGG+GGG | - | chr8_4:51058073-51058092 | None:intergenic | 60.0% | |
| CAGTAGGTGTGCGTAGGGAG+GGG | - | chr8_4:51058074-51058093 | None:intergenic | 60.0% | |
| GCAGTAGGTGTGCGTAGGGA+GGG | - | chr8_4:51058075-51058094 | None:intergenic | 60.0% | |
| AGCAGTAGGTGTGCGTAGGG+AGG | - | chr8_4:51058076-51058095 | None:intergenic | 60.0% | |
| !! | GGGCTTTGTTTGGAGGGGAG+GGG | + | chr8_4:51058664-51058683 | Msa1331510:intron | 60.0% |
| GGGAGGGGAAGGGAAGACTT+TGG | + | chr8_4:51058679-51058698 | Msa1331510:intron | 60.0% | |
| ! | GGAAGGGAAGACTTTGGGGG+TGG | + | chr8_4:51058685-51058704 | Msa1331510:intron | 60.0% |
| ! | GGAAAACACGGAGGTGTGGG+TGG | - | chr8_4:51058849-51058868 | None:intergenic | 60.0% |
| !!! | GGAGGGGAGGGTTTTTTGGG+GGG | - | chr8_4:51059127-51059146 | None:intergenic | 60.0% |
| !!! | GGGAGGGGAGGGTTTTTTGG+GGG | - | chr8_4:51059128-51059147 | None:intergenic | 60.0% |
| GAGTTTGGAGGGAACGGGAG+GGG | - | chr8_4:51059199-51059218 | None:intergenic | 60.0% | |
| GTGAGTTTGGAGGGAACGGG+AGG | - | chr8_4:51059201-51059220 | None:intergenic | 60.0% | |
| ! | TGGTGGTGTAGAGGCGGAGG+GGG | - | chr8_4:51056790-51056809 | None:intergenic | 65.0% |
| ! | GTGGTGGTGTAGAGGCGGAG+GGG | - | chr8_4:51056791-51056810 | None:intergenic | 65.0% |
| ! | GGTGGTGGTGTAGAGGCGGA+GGG | - | chr8_4:51056792-51056811 | None:intergenic | 65.0% |
| ! | TGGCGGTGGTGGTGTAGAGG+CGG | - | chr8_4:51056796-51056815 | None:intergenic | 65.0% |
| GGAGAGGAATGTGGCGGTGG+TGG | - | chr8_4:51056807-51056826 | None:intergenic | 65.0% | |
| AGCGGAGAGGAATGTGGCGG+TGG | - | chr8_4:51056810-51056829 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGCAGAAGCGGAG+AGG | - | chr8_4:51056823-51056842 | None:intergenic | 65.0% |
| GGAAAGGGAGGTGGTCGTGG+TGG | - | chr8_4:51056839-51056858 | None:intergenic | 65.0% | |
| GCCTCGATCCCGGCGTTTAC+AGG | + | chr8_4:51056944-51056963 | Msa1331510:CDS | 65.0% | |
| CCCTGTAAACGCCGGGATCG+AGG | - | chr8_4:51056948-51056967 | None:intergenic | 65.0% | |
| ! | GGAACGGGAGGGGAGGGTTT+TGG | - | chr8_4:51059189-51059208 | None:intergenic | 65.0% |
| TTGGAGGGAACGGGAGGGGA+GGG | - | chr8_4:51059195-51059214 | None:intergenic | 65.0% | |
| TTTGGAGGGAACGGGAGGGG+AGG | - | chr8_4:51059196-51059215 | None:intergenic | 65.0% | |
| ! | CGGTGGTGGTGTAGAGGCGG+AGG | - | chr8_4:51056793-51056812 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 51056680 | 51060705 | 51056680 | ID=Msa1331510;Name=Msa1331510 |
| chr8_4 | mRNA | 51056680 | 51060705 | 51056680 | ID=Msa1331510-mRNA-1;Parent=Msa1331510;Name=Msa1331510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=32|0.66|0.5|1|0.33|0.25|4|281|219 |
| chr8_4 | exon | 51056680 | 51056966 | 51056680 | ID=Msa1331510-mRNA-1:exon:14987;Parent=Msa1331510-mRNA-1 |
| chr8_4 | exon | 51057046 | 51057201 | 51057046 | ID=Msa1331510-mRNA-1:exon:14988;Parent=Msa1331510-mRNA-1 |
| chr8_4 | exon | 51057208 | 51057373 | 51057208 | ID=Msa1331510-mRNA-1:exon:14989;Parent=Msa1331510-mRNA-1 |
| chr8_4 | exon | 51060342 | 51060705 | 51060342 | ID=Msa1331510-mRNA-1:exon:14990;Parent=Msa1331510-mRNA-1 |
| chr8_4 | five_prime_UTR | 51056680 | 51056711 | 51056680 | ID=Msa1331510-mRNA-1:five_prime_utr;Parent=Msa1331510-mRNA-1 |
| chr8_4 | CDS | 51056712 | 51056966 | 51056712 | ID=Msa1331510-mRNA-1:cds;Parent=Msa1331510-mRNA-1 |
| chr8_4 | CDS | 51057046 | 51057201 | 51057046 | ID=Msa1331510-mRNA-1:cds;Parent=Msa1331510-mRNA-1 |
| chr8_4 | CDS | 51057208 | 51057373 | 51057208 | ID=Msa1331510-mRNA-1:cds;Parent=Msa1331510-mRNA-1 |
| chr8_4 | CDS | 51060342 | 51060424 | 51060342 | ID=Msa1331510-mRNA-1:cds;Parent=Msa1331510-mRNA-1 |
| chr8_4 | three_prime_UTR | 51060425 | 51060705 | 51060425 | ID=Msa1331510-mRNA-1:three_prime_utr;Parent=Msa1331510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
