Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265350 | XP_003610134.1 | 99.644 | 281 | 1 | 0 | 1 | 281 | 1 | 281 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265350 | sp|O64614|YIP4A_ARATH | 80.070 | 286 | 47 | 4 | 1 | 281 | 1 | 281 | 2.79e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265350 | B7FLJ0 | 99.644 | 281 | 1 | 0 | 1 | 281 | 1 | 281 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1265350 | Msa1461250 | 0.878947 | 1.858251e-69 | -8.615850e-47 |
| Msa1076680 | Msa1265350 | -0.806252 | 9.004400e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265350 | MtrunA17_Chr4g0072501 | 99.644 | 281 | 1 | 0 | 1 | 281 | 1 | 281 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265350 | AT2G18840.1 | 80.070 | 286 | 47 | 4 | 1 | 281 | 1 | 281 | 2.84e-133 | 379 |
| Msa1265350 | AT4G30260.3 | 78.596 | 285 | 52 | 3 | 1 | 281 | 1 | 280 | 2.68e-126 | 361 |
| Msa1265350 | AT4G30260.1 | 78.596 | 285 | 52 | 3 | 1 | 281 | 1 | 280 | 2.68e-126 | 361 |
| Msa1265350 | AT4G30260.2 | 78.947 | 285 | 51 | 3 | 1 | 281 | 76 | 355 | 2.78e-125 | 361 |
Find 94 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAAGAGAGGAAAGAAAA+AGG | 0.200703 | 8_2:+69579175 | Msa1265350:five_prime_UTR |
| CTTGGAATTCCCTTCTAAAT+AGG | 0.205486 | 8_2:+69582945 | Msa1265350:three_prime_UTR |
| CTTTGCGTGATTGGGATCTT+TGG | 0.212274 | 8_2:+69579730 | Msa1265350:CDS |
| TCTTAGGTCTCACTCTTTCT+TGG | 0.230737 | 8_2:+69579775 | Msa1265350:CDS |
| GAGGGGTGAGAAGAGGATTT+GGG | 0.249482 | 8_2:-69579498 | None:intergenic |
| AGAGGGGTGAGAAGAGGATT+TGG | 0.272320 | 8_2:-69579499 | None:intergenic |
| TTTGCGTGATTGGGATCTTT+GGG | 0.284611 | 8_2:+69579731 | Msa1265350:CDS |
| GACATTGAATGTCCTGCTTC+TGG | 0.295731 | 8_2:+69582418 | Msa1265350:CDS |
| CTGGTAAGGCTTTGCGTGAT+TGG | 0.311351 | 8_2:+69579721 | Msa1265350:CDS |
| TACCTTGACTGAACCTGTTT+GGG | 0.319249 | 8_2:+69579620 | Msa1265350:CDS |
| GAAGAAGGAGGAGGAGGAAG+AGG | 0.324483 | 8_2:-69579552 | None:intergenic |
| TGACATTGGCGTGGAGCTCT+TGG | 0.332939 | 8_2:+69582770 | Msa1265350:CDS |
| TACCAGGATCTTCACGATTC+GGG | 0.337307 | 8_2:-69579704 | None:intergenic |
| TTGGTCTGCTTCTGTCAAAA+AGG | 0.353322 | 8_2:+69579794 | Msa1265350:CDS |
| GAGATGGTTTGCAGCAAGTT+TGG | 0.354545 | 8_2:-69583113 | None:intergenic |
| ATACCTTGACTGAACCTGTT+TGG | 0.358956 | 8_2:+69579619 | Msa1265350:CDS |
| GCATTTGCCTTACTTGCTGC+TGG | 0.365044 | 8_2:+69582383 | Msa1265350:CDS |
| GAAGGAGGAGGAGGAAGAGG+AGG | 0.377972 | 8_2:-69579549 | None:intergenic |
| AGGGGTGAGAAGAGGATTTG+GGG | 0.387373 | 8_2:-69579497 | None:intergenic |
| TGGTAAGGCTTTGCGTGATT+GGG | 0.399572 | 8_2:+69579722 | Msa1265350:CDS |
| TTACCAGGATCTTCACGATT+CGG | 0.409800 | 8_2:-69579705 | None:intergenic |
| CGGGTAGAAGAAGGAGGAGG+AGG | 0.413219 | 8_2:-69579558 | None:intergenic |
| GGATCTTCACGATTCGGGTT+AGG | 0.413526 | 8_2:-69579699 | None:intergenic |
| TGCTTATTCCCTCTTGATGT+TGG | 0.413824 | 8_2:+69582691 | Msa1265350:CDS |
| CGATCTCGTCGATGTCAGAT+TGG | 0.423884 | 8_2:-69579344 | None:intergenic |
| ACAGGTTCAGTCAAGGTATT+GGG | 0.426001 | 8_2:-69579615 | None:intergenic |
| AACCGAGCAGACTCAGACTC+TGG | 0.433237 | 8_2:-69582666 | None:intergenic |
| GATCTCGTCGATGTCAGATT+GGG | 0.440020 | 8_2:-69579343 | None:intergenic |
| TTTCAAATTACTAACAATCC+TGG | 0.444881 | 8_2:-69579664 | None:intergenic |
| GACATTGGCGTGGAGCTCTT+GGG | 0.445245 | 8_2:+69582771 | Msa1265350:CDS |
| AGAGGAGGGAGAGAAGAAGA+AGG | 0.446255 | 8_2:-69579534 | None:intergenic |
| AACAGGTTCAGTCAAGGTAT+TGG | 0.450830 | 8_2:-69579616 | None:intergenic |
| GAACAATGTTATAGTAAAAG+TGG | 0.451640 | 8_2:+69582735 | Msa1265350:CDS |
| GAAGAAGTGGAAGAAGTGAC+GGG | 0.456726 | 8_2:-69579438 | None:intergenic |
| AAGGAGGAGGAGGAAGAGGA+GGG | 0.458852 | 8_2:-69579548 | None:intergenic |
| GATATCTCTACCTCCGGATT+CGG | 0.458948 | 8_2:+69579585 | Msa1265350:CDS |
| GGATGATGCGTGAAGGGGTA+TGG | 0.460845 | 8_2:-69579322 | None:intergenic |
| GAGGAGGGAGAGAAGAAGAA+GGG | 0.465284 | 8_2:-69579533 | None:intergenic |
| AGAAGAAGTGGAAGAAGTGA+CGG | 0.467329 | 8_2:-69579439 | None:intergenic |
| AATCCGGAGGTAGAGATATC+AGG | 0.471699 | 8_2:-69579582 | None:intergenic |
| CTAAAATTTGGCATTTACAT+TGG | 0.472904 | 8_2:+69579103 | None:intergenic |
| TACAGCACCAGCAGCAAGTA+AGG | 0.473133 | 8_2:-69582390 | None:intergenic |
| ATTGAAGCGCGTGGAGGAGA+TGG | 0.474354 | 8_2:-69579414 | None:intergenic |
| TTTCTCATGTATGTATCTGT+TGG | 0.477366 | 8_2:+69582859 | Msa1265350:CDS |
| TGGGAGAGAGGGGTGAGAAG+AGG | 0.477680 | 8_2:-69579505 | None:intergenic |
| ACATTGATGCATTTAGTCAA+TGG | 0.480573 | 8_2:-69582896 | None:intergenic |
| GGAGGAGATGGTGGACGAGC+AGG | 0.480676 | 8_2:-69579402 | None:intergenic |
| ATTGGGAGCAGGTCCGAATC+CGG | 0.481172 | 8_2:-69579598 | None:intergenic |
| AAATCTCATTTACGCTTCTC+CGG | 0.482794 | 8_2:+69579368 | Msa1265350:CDS |
| CTGTCAAAAGAGATCTCTCC+AGG | 0.485149 | 8_2:+69579646 | Msa1265350:CDS |
| GGGTGCGGGATTAGGAAGAT+TGG | 0.490046 | 8_2:-69579475 | None:intergenic |
| ATTAATGCACCAACATCAAG+AGG | 0.490162 | 8_2:-69582700 | None:intergenic |
| CAATCACGCAAAGCCTTACC+AGG | 0.493751 | 8_2:-69579720 | None:intergenic |
| TTCCAGAGTCTGAGTCTGCT+CGG | 0.495796 | 8_2:+69582664 | Msa1265350:CDS |
| ACTTTATTCAGATAACTACT+TGG | 0.497219 | 8_2:+69582927 | Msa1265350:three_prime_UTR |
| ATTGATGAAAGGAGAAGAAG+TGG | 0.504994 | 8_2:-69579451 | None:intergenic |
| CGAGCAGGAAGAACGGTGGC+CGG | 0.505096 | 8_2:-69579387 | None:intergenic |
| CGACCTGATATCTCTACCTC+CGG | 0.515376 | 8_2:+69579579 | Msa1265350:CDS |
| AACCCGAATCGTGAAGATCC+TGG | 0.519938 | 8_2:+69579702 | Msa1265350:CDS |
| TGTTATAGTAAAAGTGGTAG+TGG | 0.523207 | 8_2:+69582741 | Msa1265350:CDS |
| AAGAAAACAATGAAGAAGAA+AGG | 0.524288 | 8_2:-69579756 | None:intergenic |
| AGGAGGGAGAGAAGAAGAAG+GGG | 0.529098 | 8_2:-69579532 | None:intergenic |
| TCAGTCAAGGTATTGGGAGC+AGG | 0.534017 | 8_2:-69579609 | None:intergenic |
| GGAAGATTGGAATTGATGAA+AGG | 0.538609 | 8_2:-69579462 | None:intergenic |
| ATATCAGGTCGGGTAGAAGA+AGG | 0.544326 | 8_2:-69579567 | None:intergenic |
| GGGGTGAGAAGAGGATTTGG+GGG | 0.544891 | 8_2:-69579496 | None:intergenic |
| AAGAGGCTATTACCAGAAGC+AGG | 0.553367 | 8_2:-69582430 | None:intergenic |
| AATGATTGTATAATATTACA+TGG | 0.560624 | 8_2:+69583076 | Msa1265350:three_prime_UTR |
| GGAGGTAGAGATATCAGGTC+GGG | 0.560800 | 8_2:-69579577 | None:intergenic |
| TTGCGTGATTGGGATCTTTG+GGG | 0.563543 | 8_2:+69579732 | Msa1265350:CDS |
| GAATCGTGAAGATCCTGGTA+AGG | 0.584754 | 8_2:+69579707 | Msa1265350:CDS |
| GGGTGAGAAGAGGATTTGGG+GGG | 0.585558 | 8_2:-69579495 | None:intergenic |
| AGGGTAACAAAGAATACGAT+AGG | 0.592932 | 8_2:-69582988 | None:intergenic |
| TGGTGGACGAGCAGGAAGAA+CGG | 0.593661 | 8_2:-69579394 | None:intergenic |
| AGATTGGGATGATGCGTGAA+GGG | 0.609226 | 8_2:-69579328 | None:intergenic |
| GAAGCGCGTGGAGGAGATGG+TGG | 0.610651 | 8_2:-69579411 | None:intergenic |
| ATAAGCTAAATTAAGAAGAG+AGG | 0.621304 | 8_2:+69579164 | Msa1265350:five_prime_UTR |
| GGAGGGAGAGAAGAAGAAGG+GGG | 0.622958 | 8_2:-69579531 | None:intergenic |
| ATCCCAAACAGGTTCAGTCA+AGG | 0.623683 | 8_2:-69579622 | None:intergenic |
| CAGATTGGGATGATGCGTGA+AGG | 0.631170 | 8_2:-69579329 | None:intergenic |
| GGTCGGGTAGAAGAAGGAGG+AGG | 0.632753 | 8_2:-69579561 | None:intergenic |
| GTGACGGGGATTGAAGCGCG+TGG | 0.640207 | 8_2:-69579423 | None:intergenic |
| TTGACTGCAGAACTCATGAA+AGG | 0.643060 | 8_2:-69582802 | None:intergenic |
| TGGTATGTGTGACATTGGCG+TGG | 0.645314 | 8_2:+69582761 | Msa1265350:CDS |
| AAGAAGTGGAAGAAGTGACG+GGG | 0.646121 | 8_2:-69579437 | None:intergenic |
| GGTAGTGGTATGTGTGACAT+TGG | 0.650583 | 8_2:+69582756 | Msa1265350:CDS |
| TCAGGTCGGGTAGAAGAAGG+AGG | 0.656155 | 8_2:-69579564 | None:intergenic |
| GGGAGCAGGTCCGAATCCGG+AGG | 0.661116 | 8_2:-69579595 | None:intergenic |
| GATTGGGATGATGCGTGAAG+GGG | 0.661855 | 8_2:-69579327 | None:intergenic |
| GGGGCGCGAGTACAAAAGAA+GGG | 0.663933 | 8_2:-69583007 | None:intergenic |
| ACGGGGATTGAAGCGCGTGG+AGG | 0.669835 | 8_2:-69579420 | None:intergenic |
| CGGAGGTAGAGATATCAGGT+CGG | 0.680944 | 8_2:-69579578 | None:intergenic |
| TTAATGCACCAACATCAAGA+GGG | 0.688001 | 8_2:-69582699 | None:intergenic |
| TGGACGAGCAGGAAGAACGG+TGG | 0.746906 | 8_2:-69579391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAATCAAATCAAAT+TGG | - | chr8_2:69579129-69579148 | None:intergenic | 10.0% |
| !! | AATTATGTAGTTTATATTAT+TGG | - | chr8_2:69581402-69581421 | None:intergenic | 10.0% |
| !! | AATAATATAAACTACATAAT+TGG | + | chr8_2:69581401-69581420 | Msa1265350:intron | 10.0% |
| !! | ATAATATAAACTACATAATT+GGG | + | chr8_2:69581402-69581421 | Msa1265350:intron | 10.0% |
| !! | ATTGAAATTGAAAGAAAAAA+AGG | + | chr8_2:69579235-69579254 | Msa1265350:five_prime_UTR | 15.0% |
| !! | CTAGATACATTTATTATATA+TGG | + | chr8_2:69580186-69580205 | Msa1265350:intron | 15.0% |
| !! | ACAGACAATTAAAAAAAAAA+GGG | - | chr8_2:69580595-69580614 | None:intergenic | 15.0% |
| !! | TACAGACAATTAAAAAAAAA+AGG | - | chr8_2:69580596-69580615 | None:intergenic | 15.0% |
| !!! | TTTTGATAGAAATATAACAT+TGG | + | chr8_2:69580760-69580779 | Msa1265350:intron | 15.0% |
| !! | ATTATTTGATGTCAAAATAT+TGG | - | chr8_2:69581513-69581532 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTTTTTTGAG+AGG | + | chr8_2:69582179-69582198 | Msa1265350:intron | 15.0% |
| !!! | TGTTTTTTTTTTTTTTGAGA+GGG | + | chr8_2:69582180-69582199 | Msa1265350:intron | 15.0% |
| !! | ATATATAGTATAAAAGACAA+AGG | - | chr8_2:69582228-69582247 | None:intergenic | 15.0% |
| !! | AATGATTGTATAATATTACA+TGG | + | chr8_2:69583076-69583095 | Msa1265350:three_prime_UTR | 15.0% |
| !!! | TAATTATGCTCATTTTTATC+CGG | + | chr8_2:69580366-69580385 | Msa1265350:intron | 20.0% |
| !! | AATTCAATTTATTATGAGTC+CGG | - | chr8_2:69580388-69580407 | None:intergenic | 20.0% |
| !!! | ATAAAGTTTTTACTTCTCTA+GGG | - | chr8_2:69580543-69580562 | None:intergenic | 20.0% |
| !!! | AATAAAGTTTTTACTTCTCT+AGG | - | chr8_2:69580544-69580563 | None:intergenic | 20.0% |
| !! | TGTCTGTATATATGTTTATA+AGG | + | chr8_2:69580608-69580627 | Msa1265350:intron | 20.0% |
| !! | TGTATATATGTTTATAAGGA+TGG | + | chr8_2:69580612-69580631 | Msa1265350:intron | 20.0% |
| !! | AATAAATTGTTAGATGTTAG+CGG | - | chr8_2:69580706-69580725 | None:intergenic | 20.0% |
| !!! | AGTTCAAAAAACAGTTTTAT+AGG | - | chr8_2:69580806-69580825 | None:intergenic | 20.0% |
| !! | AAAACAAATTATGCATTTCT+AGG | - | chr8_2:69580948-69580967 | None:intergenic | 20.0% |
| !! | ATATGTTCATGTTATGATTT+AGG | - | chr8_2:69581079-69581098 | None:intergenic | 20.0% |
| !! | CATCAAATAATTTGAGTATT+AGG | + | chr8_2:69581522-69581541 | Msa1265350:intron | 20.0% |
| !! | AATTCAAAGAAAAACATGTT+GGG | - | chr8_2:69581588-69581607 | None:intergenic | 20.0% |
| !! | AAATTCAAAGAAAAACATGT+TGG | - | chr8_2:69581589-69581608 | None:intergenic | 20.0% |
| !!! | TTTTGAAGTTTTCATTTGAT+GGG | + | chr8_2:69581634-69581653 | Msa1265350:intron | 20.0% |
| !!! | ACTAACCATTTTATAGAAAA+TGG | + | chr8_2:69582139-69582158 | Msa1265350:intron | 20.0% |
| !!! | ATAGTCCATTTTCTATAAAA+TGG | - | chr8_2:69582147-69582166 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTTTTGAGAG+GGG | + | chr8_2:69582181-69582200 | Msa1265350:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGAGG+GGG | + | chr8_2:69582182-69582201 | Msa1265350:intron | 20.0% |
| !! | AAAGTTAAAAGCTCATAAAA+TGG | - | chr8_2:69582472-69582491 | None:intergenic | 20.0% |
| !!! | ATCTGTTTTGATGTATAAAA+AGG | + | chr8_2:69582531-69582550 | Msa1265350:intron | 20.0% |
| !! | GAAGATTTAATTGTATCATA+AGG | + | chr8_2:69582553-69582572 | Msa1265350:intron | 20.0% |
| !! | ACAAAAATTCCTATTTAGAA+GGG | - | chr8_2:69582957-69582976 | None:intergenic | 20.0% |
| !! | AACAAAAATTCCTATTTAGA+AGG | - | chr8_2:69582958-69582977 | None:intergenic | 20.0% |
| !! | TATCAAACAGAAAAAGAAAA+GGG | - | chr8_2:69583031-69583050 | None:intergenic | 20.0% |
| !! | ATATCAAACAGAAAAAGAAA+AGG | - | chr8_2:69583032-69583051 | None:intergenic | 20.0% |
| ! | ATAAGCTAAATTAAGAAGAG+AGG | + | chr8_2:69579164-69579183 | Msa1265350:five_prime_UTR | 25.0% |
| ! | TTTCAAATTACTAACAATCC+TGG | - | chr8_2:69579667-69579686 | None:intergenic | 25.0% |
| ! | AAGAAAACAATGAAGAAGAA+AGG | - | chr8_2:69579759-69579778 | None:intergenic | 25.0% |
| !! | TTCTTCTTCATTGTTTTCTT+AGG | + | chr8_2:69579759-69579778 | Msa1265350:CDS | 25.0% |
| ! | AATCTGATATTATGTTGATG+TGG | + | chr8_2:69579888-69579907 | Msa1265350:intron | 25.0% |
| ! | CATTCTAATCTGAATTGAAT+AGG | - | chr8_2:69579961-69579980 | None:intergenic | 25.0% |
| ! | AGGAAATTGGATATAGTAAA+TGG | + | chr8_2:69580037-69580056 | Msa1265350:intron | 25.0% |
| ! | GATTCAAGTATAATTCTAAC+AGG | - | chr8_2:69580167-69580186 | None:intergenic | 25.0% |
| !!! | AACCTAAATGTTTTTTGGAA+AGG | - | chr8_2:69580737-69580756 | None:intergenic | 25.0% |
| !!! | AATGCAACCTAAATGTTTTT+TGG | - | chr8_2:69580742-69580761 | None:intergenic | 25.0% |
| !! | TCATGTTATGATTTAGGATT+AGG | - | chr8_2:69581073-69581092 | None:intergenic | 25.0% |
| !! | ACCATATAATGGAAAGAAAT+AGG | + | chr8_2:69581263-69581282 | Msa1265350:intron | 25.0% |
| !! | CCATATAATGGAAAGAAATA+GGG | + | chr8_2:69581264-69581283 | Msa1265350:intron | 25.0% |
| !! | CATATAATGGAAAGAAATAG+GGG | + | chr8_2:69581265-69581284 | Msa1265350:intron | 25.0% |
| !! | TAATTATTGTGAAGCACTTT+CGG | - | chr8_2:69581367-69581386 | None:intergenic | 25.0% |
| !!! | TGTTGGGTTATTTTAAAACT+TGG | - | chr8_2:69581572-69581591 | None:intergenic | 25.0% |
| !!! | GTTTTGAAGTTTTCATTTGA+TGG | + | chr8_2:69581633-69581652 | Msa1265350:intron | 25.0% |
| !!! | TTTTTAGTAAACAAGAACTG+TGG | + | chr8_2:69581658-69581677 | Msa1265350:intron | 25.0% |
| ! | ATATGCTTTATAGAACTGAA+TGG | - | chr8_2:69581734-69581753 | None:intergenic | 25.0% |
| ! | CTATAAAGCATATAACTCAT+TGG | + | chr8_2:69581741-69581760 | Msa1265350:intron | 25.0% |
| !!! | TTTTTTTTTTTTTGAGAGGG+GGG | + | chr8_2:69582183-69582202 | Msa1265350:intron | 25.0% |
| ! | GAACAATGTTATAGTAAAAG+TGG | + | chr8_2:69582735-69582754 | Msa1265350:CDS | 25.0% |
| ! | ATACATACATGAGAAAAACA+GGG | - | chr8_2:69582855-69582874 | None:intergenic | 25.0% |
| ! | ACTTTATTCAGATAACTACT+TGG | + | chr8_2:69582927-69582946 | Msa1265350:three_prime_UTR | 25.0% |
| ! | ATCAAACAGAAAAAGAAAAG+GGG | - | chr8_2:69583030-69583049 | None:intergenic | 25.0% |
| TAAGAAGAGAGGAAAGAAAA+AGG | + | chr8_2:69579175-69579194 | Msa1265350:five_prime_UTR | 30.0% | |
| AAGAAGAGAGGAAAGAAAAA+GGG | + | chr8_2:69579176-69579195 | Msa1265350:five_prime_UTR | 30.0% | |
| TGATATTATGTTGATGTGGA+AGG | + | chr8_2:69579892-69579911 | Msa1265350:intron | 30.0% | |
| TACGAAATTTCCATGTAACT+AGG | + | chr8_2:69580017-69580036 | Msa1265350:intron | 30.0% | |
| TTTCCATGTAACTAGGAAAT+TGG | + | chr8_2:69580024-69580043 | Msa1265350:intron | 30.0% | |
| TATCCAATTTCCTAGTTACA+TGG | - | chr8_2:69580030-69580049 | None:intergenic | 30.0% | |
| GTCAACTTCTACAAGAAAAA+TGG | - | chr8_2:69580094-69580113 | None:intergenic | 30.0% | |
| TGAATTTATACCAAAGGGAT+TGG | + | chr8_2:69580501-69580520 | Msa1265350:intron | 30.0% | |
| TTTATATGTTCCAATCCCTT+TGG | - | chr8_2:69580514-69580533 | None:intergenic | 30.0% | |
| ATATGTTTATAAGGATGGCT+TGG | + | chr8_2:69580617-69580636 | Msa1265350:intron | 30.0% | |
| TGCCTTTCCAAAAAACATTT+AGG | + | chr8_2:69580732-69580751 | Msa1265350:intron | 30.0% | |
| GCATGCATTACTAATCTATA+GGG | - | chr8_2:69580878-69580897 | None:intergenic | 30.0% | |
| ! | TATGCATTTCTAGGTAATGA+GGG | - | chr8_2:69580939-69580958 | None:intergenic | 30.0% |
| ! | TTATGCATTTCTAGGTAATG+AGG | - | chr8_2:69580940-69580959 | None:intergenic | 30.0% |
| !!! | TGCATAATTTGTTTTCTGCA+TGG | + | chr8_2:69580953-69580972 | Msa1265350:intron | 30.0% |
| !!! | GCATAATTTGTTTTCTGCAT+GGG | + | chr8_2:69580954-69580973 | Msa1265350:intron | 30.0% |
| ! | AACGATAAAGTTTTCTGCAT+TGG | + | chr8_2:69580981-69581000 | Msa1265350:intron | 30.0% |
| TTCTGAACGTATTTGTAGTT+AGG | - | chr8_2:69581108-69581127 | None:intergenic | 30.0% | |
| ATGAAATATGTGTGCCTAAA+TGG | + | chr8_2:69581227-69581246 | Msa1265350:intron | 30.0% | |
| TGAAATATGTGTGCCTAAAT+GGG | + | chr8_2:69581228-69581247 | Msa1265350:intron | 30.0% | |
| CAGCTATCTATACCATATAA+TGG | + | chr8_2:69581252-69581271 | Msa1265350:intron | 30.0% | |
| ! | CCCTATTTCTTTCCATTATA+TGG | - | chr8_2:69581267-69581286 | None:intergenic | 30.0% |
| TATTGTCATTGCTAGTATTC+CGG | - | chr8_2:69581486-69581505 | None:intergenic | 30.0% | |
| TAGGTACAATTAATCTGACT+AGG | + | chr8_2:69581541-69581560 | Msa1265350:intron | 30.0% | |
| GAAATCATCATCCTAATAGT+TGG | - | chr8_2:69581846-69581865 | None:intergenic | 30.0% | |
| ACTATTAGGATGATGATTTC+AGG | + | chr8_2:69581846-69581865 | Msa1265350:intron | 30.0% | |
| ! | ACTATGACATCAGCTTATTT+TGG | - | chr8_2:69581891-69581910 | None:intergenic | 30.0% |
| TGTTATAGTAAAAGTGGTAG+TGG | + | chr8_2:69582741-69582760 | Msa1265350:CDS | 30.0% | |
| GATACATACATGAGAAAAAC+AGG | - | chr8_2:69582856-69582875 | None:intergenic | 30.0% | |
| TTTCTCATGTATGTATCTGT+TGG | + | chr8_2:69582859-69582878 | Msa1265350:CDS | 30.0% | |
| ACATTGATGCATTTAGTCAA+TGG | - | chr8_2:69582899-69582918 | None:intergenic | 30.0% | |
| TCAAACAGAAAAAGAAAAGG+GGG | - | chr8_2:69583029-69583048 | None:intergenic | 30.0% | |
| AAATCTCATTTACGCTTCTC+CGG | + | chr8_2:69579368-69579387 | Msa1265350:CDS | 35.0% | |
| ATTGATGAAAGGAGAAGAAG+TGG | - | chr8_2:69579454-69579473 | None:intergenic | 35.0% | |
| GGAAGATTGGAATTGATGAA+AGG | - | chr8_2:69579465-69579484 | None:intergenic | 35.0% | |
| CTAATGCGCATGATATTAGT+AGG | + | chr8_2:69580121-69580140 | Msa1265350:intron | 35.0% | |
| ! | TTTCGGGTACATTGATTGTT+TGG | + | chr8_2:69580256-69580275 | Msa1265350:intron | 35.0% |
| CTCAGATTCTCTTCAATTTG+TGG | + | chr8_2:69580413-69580432 | Msa1265350:intron | 35.0% | |
| TCTGCGTGAATTTATACCAA+AGG | + | chr8_2:69580495-69580514 | Msa1265350:intron | 35.0% | |
| CTGCGTGAATTTATACCAAA+GGG | + | chr8_2:69580496-69580515 | Msa1265350:intron | 35.0% | |
| ! | TAAAGGAGTTTGGAGTCATA+AGG | + | chr8_2:69580657-69580676 | Msa1265350:intron | 35.0% |
| ! | AAAGGAGTTTGGAGTCATAA+GGG | + | chr8_2:69580658-69580677 | Msa1265350:intron | 35.0% |
| AGGAAGTCAGAGAAAGAATA+CGG | - | chr8_2:69580786-69580805 | None:intergenic | 35.0% | |
| CGCATGCATTACTAATCTAT+AGG | - | chr8_2:69580879-69580898 | None:intergenic | 35.0% | |
| TCATTCAAATCTGCACATTC+AGG | - | chr8_2:69581134-69581153 | None:intergenic | 35.0% | |
| AAATGGTTGCAAACAGATCA+TGG | - | chr8_2:69581159-69581178 | None:intergenic | 35.0% | |
| CACACATATTTCATCACTAG+TGG | - | chr8_2:69581221-69581240 | None:intergenic | 35.0% | |
| TATAGATAGCTGTCCCATTT+AGG | - | chr8_2:69581244-69581263 | None:intergenic | 35.0% | |
| ! | TGAATTTTTCCTCAGATAGC+TGG | + | chr8_2:69581602-69581621 | Msa1265350:intron | 35.0% |
| TCATCATCCTAATAGTTGGA+TGG | - | chr8_2:69581842-69581861 | None:intergenic | 35.0% | |
| ! | TCTTTTTCTTCTCCATGAGT+CGG | + | chr8_2:69581942-69581961 | Msa1265350:intron | 35.0% |
| !! | TGCAAAGTTAGCTTTCAGTT+TGG | + | chr8_2:69582010-69582029 | Msa1265350:intron | 35.0% |
| ! | CTTTCAGTTTGGAATCTGTA+AGG | + | chr8_2:69582021-69582040 | Msa1265350:intron | 35.0% |
| ACTGACCAAATTCATTTGAC+AGG | - | chr8_2:69582303-69582322 | None:intergenic | 35.0% | |
| ! | CTTTTTATTGTCTCAGTCTG+AGG | + | chr8_2:69582349-69582368 | Msa1265350:intron | 35.0% |
| AGTGTCATATTTACTTGTCG+AGG | + | chr8_2:69582497-69582516 | Msa1265350:intron | 35.0% | |
| AGCCTAATTGAGAGTCAAAA+AGG | + | chr8_2:69582577-69582596 | Msa1265350:intron | 35.0% | |
| GCCTAATTGAGAGTCAAAAA+GGG | + | chr8_2:69582578-69582597 | Msa1265350:intron | 35.0% | |
| ! | TTCGTCTCTTCAACTTTTCA+GGG | + | chr8_2:69582625-69582644 | Msa1265350:intron | 35.0% |
| TTAATGCACCAACATCAAGA+GGG | - | chr8_2:69582702-69582721 | None:intergenic | 35.0% | |
| ATTAATGCACCAACATCAAG+AGG | - | chr8_2:69582703-69582722 | None:intergenic | 35.0% | |
| CTTGGAATTCCCTTCTAAAT+AGG | + | chr8_2:69582945-69582964 | Msa1265350:three_prime_UTR | 35.0% | |
| AGGGTAACAAAGAATACGAT+AGG | - | chr8_2:69582991-69583010 | None:intergenic | 35.0% | |
| AGAAGAAGTGGAAGAAGTGA+CGG | - | chr8_2:69579442-69579461 | None:intergenic | 40.0% | |
| ! | ACAGGTTCAGTCAAGGTATT+GGG | - | chr8_2:69579618-69579637 | None:intergenic | 40.0% |
| AACAGGTTCAGTCAAGGTAT+TGG | - | chr8_2:69579619-69579638 | None:intergenic | 40.0% | |
| ATACCTTGACTGAACCTGTT+TGG | + | chr8_2:69579619-69579638 | Msa1265350:CDS | 40.0% | |
| TACCTTGACTGAACCTGTTT+GGG | + | chr8_2:69579620-69579639 | Msa1265350:CDS | 40.0% | |
| ! | CTTTTGACAGTATCCCAAAC+AGG | - | chr8_2:69579636-69579655 | None:intergenic | 40.0% |
| TTACCAGGATCTTCACGATT+CGG | - | chr8_2:69579708-69579727 | None:intergenic | 40.0% | |
| TTTGCGTGATTGGGATCTTT+GGG | + | chr8_2:69579731-69579750 | Msa1265350:CDS | 40.0% | |
| TCTTAGGTCTCACTCTTTCT+TGG | + | chr8_2:69579775-69579794 | Msa1265350:CDS | 40.0% | |
| TTGGTCTGCTTCTGTCAAAA+AGG | + | chr8_2:69579794-69579813 | Msa1265350:CDS | 40.0% | |
| TATAGTAAATGGTTCCCGTG+TGG | + | chr8_2:69580048-69580067 | Msa1265350:intron | 40.0% | |
| ATCTGCATCGAAATTCCACA+CGG | - | chr8_2:69580066-69580085 | None:intergenic | 40.0% | |
| GCCAATGATCTTGTGCATTT+CGG | + | chr8_2:69580239-69580258 | Msa1265350:intron | 40.0% | |
| CCAATGATCTTGTGCATTTC+GGG | + | chr8_2:69580240-69580259 | Msa1265350:intron | 40.0% | |
| ! | TGTTTATAAGGATGGCTTGG+TGG | + | chr8_2:69580620-69580639 | Msa1265350:intron | 40.0% |
| GAGTGTGGAATAAAGGAGTT+TGG | + | chr8_2:69580647-69580666 | Msa1265350:intron | 40.0% | |
| CTTGTCATCTCTTGCAAAGA+TGG | + | chr8_2:69580900-69580919 | Msa1265350:intron | 40.0% | |
| TCACTCACACACAACAGAAA+TGG | - | chr8_2:69581176-69581195 | None:intergenic | 40.0% | |
| ATTTCTGTTGTGTGTGAGTG+AGG | + | chr8_2:69581175-69581194 | Msa1265350:intron | 40.0% | |
| GCTTCTCTTTGTTAGATGAG+TGG | + | chr8_2:69581287-69581306 | Msa1265350:intron | 40.0% | |
| !! | CTTATGTGGACTAGCTATGA+TGG | - | chr8_2:69581323-69581342 | None:intergenic | 40.0% |
| ! | TGTGAAGCACTTTCGGTAAT+GGG | - | chr8_2:69581360-69581379 | None:intergenic | 40.0% |
| ! | TTGTGAAGCACTTTCGGTAA+TGG | - | chr8_2:69581361-69581380 | None:intergenic | 40.0% |
| TGATAGATGCAAGTAAGAGC+TGG | + | chr8_2:69581767-69581786 | Msa1265350:intron | 40.0% | |
| CCTAATAGTTGGATGGTCTT+GGG | - | chr8_2:69581835-69581854 | None:intergenic | 40.0% | |
| TCCTAATAGTTGGATGGTCT+TGG | - | chr8_2:69581836-69581855 | None:intergenic | 40.0% | |
| TTTCCCTTTATCCTTTCTGC+TGG | + | chr8_2:69581982-69582001 | Msa1265350:intron | 40.0% | |
| TTCCCTTTATCCTTTCTGCT+GGG | + | chr8_2:69581983-69582002 | Msa1265350:intron | 40.0% | |
| ATCCCAGCAGAAAGGATAAA+GGG | - | chr8_2:69581988-69582007 | None:intergenic | 40.0% | |
| TGGAATCTGTAAGGTTGTTG+AGG | + | chr8_2:69582030-69582049 | Msa1265350:intron | 40.0% | |
| AGCAATACAGGAGTGAAACT+TGG | - | chr8_2:69582114-69582133 | None:intergenic | 40.0% | |
| GGTTAGTACAAGAGCAATAC+AGG | - | chr8_2:69582126-69582145 | None:intergenic | 40.0% | |
| CACGACCTGTCAAATGAATT+TGG | + | chr8_2:69582295-69582314 | Msa1265350:intron | 40.0% | |
| GTGAGATGAAAGAGAGAAAG+AGG | - | chr8_2:69582450-69582469 | None:intergenic | 40.0% | |
| !! | GCCCTTTTTGACTCTCAATT+AGG | - | chr8_2:69582582-69582601 | None:intergenic | 40.0% |
| AATTGAGAGTCAAAAAGGGC+AGG | + | chr8_2:69582582-69582601 | Msa1265350:intron | 40.0% | |
| ! | CTTCGTCTCTTCAACTTTTC+AGG | + | chr8_2:69582624-69582643 | Msa1265350:intron | 40.0% |
| TGCTTATTCCCTCTTGATGT+TGG | + | chr8_2:69582691-69582710 | Msa1265350:CDS | 40.0% | |
| TTGACTGCAGAACTCATGAA+AGG | - | chr8_2:69582805-69582824 | None:intergenic | 40.0% | |
| ! | AGAGCAAGAGCTTTTCTTCT+GGG | - | chr8_2:69582829-69582848 | None:intergenic | 40.0% |
| ! | AGGAAAGAAAAAGGGTGCGT+AGG | + | chr8_2:69579184-69579203 | Msa1265350:five_prime_UTR | 45.0% |
| AGATTGGGATGATGCGTGAA+GGG | - | chr8_2:69579331-69579350 | None:intergenic | 45.0% | |
| GATCTCGTCGATGTCAGATT+GGG | - | chr8_2:69579346-69579365 | None:intergenic | 45.0% | |
| AAGAAGTGGAAGAAGTGACG+GGG | - | chr8_2:69579440-69579459 | None:intergenic | 45.0% | |
| GAAGAAGTGGAAGAAGTGAC+GGG | - | chr8_2:69579441-69579460 | None:intergenic | 45.0% | |
| ! | GAGAAGAAGAAGGGGGTTTT+GGG | - | chr8_2:69579527-69579546 | None:intergenic | 45.0% |
| ! | AGAGAAGAAGAAGGGGGTTT+TGG | - | chr8_2:69579528-69579547 | None:intergenic | 45.0% |
| ATATCAGGTCGGGTAGAAGA+AGG | - | chr8_2:69579570-69579589 | None:intergenic | 45.0% | |
| AATCCGGAGGTAGAGATATC+AGG | - | chr8_2:69579585-69579604 | None:intergenic | 45.0% | |
| GATATCTCTACCTCCGGATT+CGG | + | chr8_2:69579585-69579604 | Msa1265350:CDS | 45.0% | |
| ATCCCAAACAGGTTCAGTCA+AGG | - | chr8_2:69579625-69579644 | None:intergenic | 45.0% | |
| CTGTCAAAAGAGATCTCTCC+AGG | + | chr8_2:69579646-69579665 | Msa1265350:CDS | 45.0% | |
| TACCAGGATCTTCACGATTC+GGG | - | chr8_2:69579707-69579726 | None:intergenic | 45.0% | |
| GAATCGTGAAGATCCTGGTA+AGG | + | chr8_2:69579707-69579726 | Msa1265350:CDS | 45.0% | |
| TGGTAAGGCTTTGCGTGATT+GGG | + | chr8_2:69579722-69579741 | Msa1265350:CDS | 45.0% | |
| CTTTGCGTGATTGGGATCTT+TGG | + | chr8_2:69579730-69579749 | Msa1265350:CDS | 45.0% | |
| TTGCGTGATTGGGATCTTTG+GGG | + | chr8_2:69579732-69579751 | Msa1265350:CDS | 45.0% | |
| TCTGCATCGAAATTCCACAC+GGG | - | chr8_2:69580065-69580084 | None:intergenic | 45.0% | |
| CCCGAAATGCACAAGATCAT+TGG | - | chr8_2:69580243-69580262 | None:intergenic | 45.0% | |
| ATTGTTTGGTACCCAGCCAA+AGG | + | chr8_2:69580270-69580289 | Msa1265350:intron | 45.0% | |
| ATTCACGCAGAGAAAGAGAG+CGG | - | chr8_2:69580486-69580505 | None:intergenic | 45.0% | |
| !! | TATAAGGATGGCTTGGTGGT+TGG | + | chr8_2:69580624-69580643 | Msa1265350:intron | 45.0% |
| !! | ATAAGGATGGCTTGGTGGTT+GGG | + | chr8_2:69580625-69580644 | Msa1265350:intron | 45.0% |
| ! | TGGTTGGGAGTGTGGAATAA+AGG | + | chr8_2:69580640-69580659 | Msa1265350:intron | 45.0% |
| GTTAGATGTTAGCGGAGAGT+GGG | - | chr8_2:69580698-69580717 | None:intergenic | 45.0% | |
| TGTTAGATGTTAGCGGAGAG+TGG | - | chr8_2:69580699-69580718 | None:intergenic | 45.0% | |
| ATGACCAACTGCAACTACTC+AGG | + | chr8_2:69581009-69581028 | Msa1265350:intron | 45.0% | |
| TGACCAACTGCAACTACTCA+GGG | + | chr8_2:69581010-69581029 | Msa1265350:intron | 45.0% | |
| AACTGCAACTACTCAGGGAA+GGG | + | chr8_2:69581015-69581034 | Msa1265350:intron | 45.0% | |
| ! | TGAATGCGGAAGGTCTTATG+TGG | - | chr8_2:69581337-69581356 | None:intergenic | 45.0% |
| !! | CTTTCGGTAATGGGTGAATG+CGG | - | chr8_2:69581351-69581370 | None:intergenic | 45.0% |
| !! | GCAGCAGTTCTGAAAACTGT+TGG | - | chr8_2:69581687-69581706 | None:intergenic | 45.0% |
| GAACTGAATGGCACGTTAGA+GGG | - | chr8_2:69581722-69581741 | None:intergenic | 45.0% | |
| AGAACTGAATGGCACGTTAG+AGG | - | chr8_2:69581723-69581742 | None:intergenic | 45.0% | |
| ATGCAAGTAAGAGCTGGTGA+TGG | + | chr8_2:69581773-69581792 | Msa1265350:intron | 45.0% | |
| CCCAAGACCATCCAACTATT+AGG | + | chr8_2:69581832-69581851 | Msa1265350:intron | 45.0% | |
| GATCCCAGCAGAAAGGATAA+AGG | - | chr8_2:69581989-69582008 | None:intergenic | 45.0% | |
| TTTGCATGATCCCAGCAGAA+AGG | - | chr8_2:69581996-69582015 | None:intergenic | 45.0% | |
| TAAGGTTGTTGAGGCCTTGA+GGG | + | chr8_2:69582039-69582058 | Msa1265350:intron | 45.0% | |
| GGGGGGTTCAAATTCTAAGT+TGG | + | chr8_2:69582200-69582219 | Msa1265350:intron | 45.0% | |
| !! | GTCTCAGTCTGAGGTTTTTG+CGG | + | chr8_2:69582358-69582377 | Msa1265350:intron | 45.0% |
| GACATTGAATGTCCTGCTTC+TGG | + | chr8_2:69582418-69582437 | Msa1265350:CDS | 45.0% | |
| AAGAGGCTATTACCAGAAGC+AGG | - | chr8_2:69582433-69582452 | None:intergenic | 45.0% | |
| !! | GTCTCTTCAACTTTTCAGGG+TGG | + | chr8_2:69582628-69582647 | Msa1265350:intron | 45.0% |
| ! | GGTAGTGGTATGTGTGACAT+TGG | + | chr8_2:69582756-69582775 | Msa1265350:CDS | 45.0% |
| ! | GAGCAAGAGCTTTTCTTCTG+GGG | - | chr8_2:69582828-69582847 | None:intergenic | 45.0% |
| ! | GAGAGCAAGAGCTTTTCTTC+TGG | - | chr8_2:69582830-69582849 | None:intergenic | 45.0% |
| GATTGGGATGATGCGTGAAG+GGG | - | chr8_2:69579330-69579349 | None:intergenic | 50.0% | |
| CAGATTGGGATGATGCGTGA+AGG | - | chr8_2:69579332-69579351 | None:intergenic | 50.0% | |
| CGATCTCGTCGATGTCAGAT+TGG | - | chr8_2:69579347-69579366 | None:intergenic | 50.0% | |
| AGGGGTGAGAAGAGGATTTG+GGG | - | chr8_2:69579500-69579519 | None:intergenic | 50.0% | |
| GAGGGGTGAGAAGAGGATTT+GGG | - | chr8_2:69579501-69579520 | None:intergenic | 50.0% | |
| AGAGGGGTGAGAAGAGGATT+TGG | - | chr8_2:69579502-69579521 | None:intergenic | 50.0% | |
| AGGAGGGAGAGAAGAAGAAG+GGG | - | chr8_2:69579535-69579554 | None:intergenic | 50.0% | |
| GAGGAGGGAGAGAAGAAGAA+GGG | - | chr8_2:69579536-69579555 | None:intergenic | 50.0% | |
| AGAGGAGGGAGAGAAGAAGA+AGG | - | chr8_2:69579537-69579556 | None:intergenic | 50.0% | |
| GGAGGTAGAGATATCAGGTC+GGG | - | chr8_2:69579580-69579599 | None:intergenic | 50.0% | |
| CGGAGGTAGAGATATCAGGT+CGG | - | chr8_2:69579581-69579600 | None:intergenic | 50.0% | |
| CGACCTGATATCTCTACCTC+CGG | + | chr8_2:69579579-69579598 | Msa1265350:CDS | 50.0% | |
| !! | TCAGTCAAGGTATTGGGAGC+AGG | - | chr8_2:69579612-69579631 | None:intergenic | 50.0% |
| ! | GGATCTTCACGATTCGGGTT+AGG | - | chr8_2:69579702-69579721 | None:intergenic | 50.0% |
| AACCCGAATCGTGAAGATCC+TGG | + | chr8_2:69579702-69579721 | Msa1265350:CDS | 50.0% | |
| CAATCACGCAAAGCCTTACC+AGG | - | chr8_2:69579723-69579742 | None:intergenic | 50.0% | |
| CTGGTAAGGCTTTGCGTGAT+TGG | + | chr8_2:69579721-69579740 | Msa1265350:CDS | 50.0% | |
| CTACATATCCGAGCTGCCTT+TGG | - | chr8_2:69580289-69580308 | None:intergenic | 50.0% | |
| CTTCCCTGAGTAGTTGCAGT+TGG | - | chr8_2:69581016-69581035 | None:intergenic | 50.0% | |
| CAACTGCAACTACTCAGGGA+AGG | + | chr8_2:69581014-69581033 | Msa1265350:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr8_2:69581461-69581480 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr8_2:69581458-69581477 | Msa1265350:intron | 50.0% |
| CTTATCCCACTAAGTGGAGC+CGG | + | chr8_2:69581464-69581483 | Msa1265350:intron | 50.0% | |
| GTATTCCGGCTCCACTTAGT+GGG | - | chr8_2:69581472-69581491 | None:intergenic | 50.0% | |
| AGTATTCCGGCTCCACTTAG+TGG | - | chr8_2:69581473-69581492 | None:intergenic | 50.0% | |
| CTAAGCACTCCAGCTATCTG+AGG | - | chr8_2:69581614-69581633 | None:intergenic | 50.0% | |
| AATGGCACGTTAGAGGGAGA+GGG | - | chr8_2:69581716-69581735 | None:intergenic | 50.0% | |
| TGATTTCAGGCGTTCAGCAC+AGG | + | chr8_2:69581859-69581878 | Msa1265350:intron | 50.0% | |
| GATTTCAGGCGTTCAGCACA+GGG | + | chr8_2:69581860-69581879 | Msa1265350:intron | 50.0% | |
| ATTTCAGGCGTTCAGCACAG+GGG | + | chr8_2:69581861-69581880 | Msa1265350:intron | 50.0% | |
| TCTCCATGAGTCGGATTGCT+TGG | + | chr8_2:69581951-69581970 | Msa1265350:intron | 50.0% | |
| TCACCAAGCAATCCGACTCA+TGG | - | chr8_2:69581957-69581976 | None:intergenic | 50.0% | |
| GTAAGGTTGTTGAGGCCTTG+AGG | + | chr8_2:69582038-69582057 | Msa1265350:intron | 50.0% | |
| AAGGTTGTTGAGGCCTTGAG+GGG | + | chr8_2:69582040-69582059 | Msa1265350:intron | 50.0% | |
| GCACTATATCATCCCCCTCA+AGG | - | chr8_2:69582056-69582075 | None:intergenic | 50.0% | |
| GAGGGGGATGATATAGTGCT+TGG | + | chr8_2:69582057-69582076 | Msa1265350:intron | 50.0% | |
| ! | GCATTTGCCTTACTTGCTGC+TGG | + | chr8_2:69582383-69582402 | Msa1265350:CDS | 50.0% |
| TACAGCACCAGCAGCAAGTA+AGG | - | chr8_2:69582393-69582412 | None:intergenic | 50.0% | |
| TTCCAGAGTCTGAGTCTGCT+CGG | + | chr8_2:69582664-69582683 | Msa1265350:CDS | 50.0% | |
| TGGTATGTGTGACATTGGCG+TGG | + | chr8_2:69582761-69582780 | Msa1265350:CDS | 50.0% | |
| GGATGATGCGTGAAGGGGTA+TGG | - | chr8_2:69579325-69579344 | None:intergenic | 55.0% | |
| ! | TGGTGGACGAGCAGGAAGAA+CGG | - | chr8_2:69579397-69579416 | None:intergenic | 55.0% |
| ATTGAAGCGCGTGGAGGAGA+TGG | - | chr8_2:69579417-69579436 | None:intergenic | 55.0% | |
| GGGTGCGGGATTAGGAAGAT+TGG | - | chr8_2:69579478-69579497 | None:intergenic | 55.0% | |
| AGAAGAGGATTTGGGGGGTG+CGG | - | chr8_2:69579493-69579512 | None:intergenic | 55.0% | |
| GGGTGAGAAGAGGATTTGGG+GGG | - | chr8_2:69579498-69579517 | None:intergenic | 55.0% | |
| GGGGTGAGAAGAGGATTTGG+GGG | - | chr8_2:69579499-69579518 | None:intergenic | 55.0% | |
| !!! | AAGGGGGTTTTGGGAGAGAG+GGG | - | chr8_2:69579518-69579537 | None:intergenic | 55.0% |
| !!! | GAAGGGGGTTTTGGGAGAGA+GGG | - | chr8_2:69579519-69579538 | None:intergenic | 55.0% |
| !!! | AGAAGGGGGTTTTGGGAGAG+AGG | - | chr8_2:69579520-69579539 | None:intergenic | 55.0% |
| GGAGGGAGAGAAGAAGAAGG+GGG | - | chr8_2:69579534-69579553 | None:intergenic | 55.0% | |
| AAGGAGGAGGAGGAAGAGGA+GGG | - | chr8_2:69579551-69579570 | None:intergenic | 55.0% | |
| GAAGAAGGAGGAGGAGGAAG+AGG | - | chr8_2:69579555-69579574 | None:intergenic | 55.0% | |
| TCAGGTCGGGTAGAAGAAGG+AGG | - | chr8_2:69579567-69579586 | None:intergenic | 55.0% | |
| ATTGGGAGCAGGTCCGAATC+CGG | - | chr8_2:69579601-69579620 | None:intergenic | 55.0% | |
| TATCCGAGCTGCCTTTGGCT+GGG | - | chr8_2:69580284-69580303 | None:intergenic | 55.0% | |
| ATATCCGAGCTGCCTTTGGC+TGG | - | chr8_2:69580285-69580304 | None:intergenic | 55.0% | |
| !! | CGGTAATGGGTGAATGCGGA+AGG | - | chr8_2:69581347-69581366 | None:intergenic | 55.0% |
| CGGCTCCACTTAGTGGGATA+AGG | - | chr8_2:69581466-69581485 | None:intergenic | 55.0% | |
| GAATGGCACGTTAGAGGGAG+AGG | - | chr8_2:69581717-69581736 | None:intergenic | 55.0% | |
| AGGTTGTTGAGGCCTTGAGG+GGG | + | chr8_2:69582041-69582060 | Msa1265350:intron | 55.0% | |
| AACCGAGCAGACTCAGACTC+TGG | - | chr8_2:69582669-69582688 | None:intergenic | 55.0% | |
| TGACATTGGCGTGGAGCTCT+TGG | + | chr8_2:69582770-69582789 | Msa1265350:CDS | 55.0% | |
| GACATTGGCGTGGAGCTCTT+GGG | + | chr8_2:69582771-69582790 | Msa1265350:CDS | 55.0% | |
| GGGGCGCGAGTACAAAAGAA+GGG | - | chr8_2:69583010-69583029 | None:intergenic | 55.0% | |
| TGGACGAGCAGGAAGAACGG+TGG | - | chr8_2:69579394-69579413 | None:intergenic | 60.0% | |
| ! | GATTTGGGGGGTGCGGGATT+AGG | - | chr8_2:69579486-69579505 | None:intergenic | 60.0% |
| ! | GAAGAGGATTTGGGGGGTGC+GGG | - | chr8_2:69579492-69579511 | None:intergenic | 60.0% |
| TGGGAGAGAGGGGTGAGAAG+AGG | - | chr8_2:69579508-69579527 | None:intergenic | 60.0% | |
| GAAGGAGGAGGAGGAAGAGG+AGG | - | chr8_2:69579552-69579571 | None:intergenic | 60.0% | |
| CGGGTAGAAGAAGGAGGAGG+AGG | - | chr8_2:69579561-69579580 | None:intergenic | 60.0% | |
| GGTCGGGTAGAAGAAGGAGG+AGG | - | chr8_2:69579564-69579583 | None:intergenic | 60.0% | |
| GTACCCAGCCAAAGGCAGCT+CGG | + | chr8_2:69580278-69580297 | Msa1265350:intron | 60.0% | |
| !! | TGGCTTGGTGGTTGGGAGTG+TGG | + | chr8_2:69580632-69580651 | Msa1265350:intron | 60.0% |
| CGTTAGAGGGAGAGGGAAGC+AGG | - | chr8_2:69581709-69581728 | None:intergenic | 60.0% | |
| ! | GGGGGCGCGAGTACAAAAGA+AGG | - | chr8_2:69583011-69583030 | None:intergenic | 60.0% |
| CGAGCAGGAAGAACGGTGGC+CGG | - | chr8_2:69579390-69579409 | None:intergenic | 65.0% | |
| !! | GGAGGAGATGGTGGACGAGC+AGG | - | chr8_2:69579405-69579424 | None:intergenic | 65.0% |
| GAAGCGCGTGGAGGAGATGG+TGG | - | chr8_2:69579414-69579433 | None:intergenic | 65.0% | |
| ACGGGGATTGAAGCGCGTGG+AGG | - | chr8_2:69579423-69579442 | None:intergenic | 65.0% | |
| ! | GTGACGGGGATTGAAGCGCG+TGG | - | chr8_2:69579426-69579445 | None:intergenic | 65.0% |
| GGGAGCAGGTCCGAATCCGG+AGG | - | chr8_2:69579598-69579617 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 69579109 | 69583128 | 69579109 | ID=Msa1265350;Name=Msa1265350 |
| chr8_2 | mRNA | 69579109 | 69583128 | 69579109 | ID=Msa1265350-mRNA-1;Parent=Msa1265350;Name=Msa1265350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=197|1|1|1|1|1|3|222|281 |
| chr8_2 | exon | 69579109 | 69579815 | 69579109 | ID=Msa1265350-mRNA-1:exon:22995;Parent=Msa1265350-mRNA-1 |
| chr8_2 | exon | 69582365 | 69582439 | 69582365 | ID=Msa1265350-mRNA-1:exon:22996;Parent=Msa1265350-mRNA-1 |
| chr8_2 | exon | 69582646 | 69583128 | 69582646 | ID=Msa1265350-mRNA-1:exon:22997;Parent=Msa1265350-mRNA-1 |
| chr8_2 | five_prime_UTR | 69579109 | 69579305 | 69579109 | ID=Msa1265350-mRNA-1:five_prime_utr;Parent=Msa1265350-mRNA-1 |
| chr8_2 | CDS | 69579306 | 69579815 | 69579306 | ID=Msa1265350-mRNA-1:cds;Parent=Msa1265350-mRNA-1 |
| chr8_2 | CDS | 69582365 | 69582439 | 69582365 | ID=Msa1265350-mRNA-1:cds;Parent=Msa1265350-mRNA-1 |
| chr8_2 | CDS | 69582646 | 69582906 | 69582646 | ID=Msa1265350-mRNA-1:cds;Parent=Msa1265350-mRNA-1 |
| chr8_2 | three_prime_UTR | 69582907 | 69583128 | 69582907 | ID=Msa1265350-mRNA-1:three_prime_utr;Parent=Msa1265350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
