Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267030 | AES92117.1 | 86.316 | 95 | 13 | 0 | 31 | 125 | 51 | 145 | 5.49e-55 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267030 | sp|Q9ZU51|RHA2B_ARATH | 53.704 | 54 | 18 | 2 | 45 | 98 | 74 | 120 | 4.79e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0628590 | Msa1267030 | 0.907445 | 5.028100e-81 | -8.615850e-47 |
| Msa0139390 | Msa1267030 | 0.861431 | 1.031168e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267030 | MtrunA17_Chr4g0069761 | 84.536 | 97 | 15 | 0 | 29 | 125 | 5 | 101 | 7.36e-59 | 177 |
| Msa1267030 | MtrunA17_Chr4g0069751 | 64.341 | 129 | 34 | 2 | 6 | 125 | 43 | 168 | 4.77e-51 | 159 |
| Msa1267030 | MtrunA17_Chr8g0387291 | 44.643 | 56 | 25 | 2 | 43 | 98 | 84 | 133 | 7.80e-13 | 61.6 |
| Msa1267030 | MtrunA17_Chr3g0120681 | 47.458 | 59 | 25 | 1 | 40 | 98 | 94 | 146 | 2.40e-12 | 60.1 |
| Msa1267030 | MtrunA17_Chr5g0397351 | 42.857 | 56 | 26 | 2 | 43 | 98 | 79 | 128 | 4.45e-12 | 58.9 |
| Msa1267030 | MtrunA17_Chr5g0426881 | 37.179 | 78 | 29 | 2 | 21 | 98 | 132 | 189 | 6.61e-12 | 61.2 |
| Msa1267030 | MtrunA17_Chr7g0248101 | 40.741 | 54 | 26 | 1 | 45 | 98 | 90 | 137 | 2.20e-11 | 58.2 |
| Msa1267030 | MtrunA17_Chr4g0073141 | 45.614 | 57 | 24 | 1 | 45 | 101 | 144 | 193 | 3.18e-11 | 59.3 |
| Msa1267030 | MtrunA17_Chr1g0191601 | 35.556 | 90 | 34 | 3 | 9 | 98 | 108 | 173 | 7.28e-11 | 58.2 |
| Msa1267030 | MtrunA17_Chr7g0273051 | 34.694 | 98 | 36 | 3 | 9 | 104 | 101 | 172 | 8.39e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267030 | AT3G43430.1 | 54.369 | 103 | 40 | 4 | 29 | 125 | 66 | 167 | 5.66e-31 | 108 |
| Msa1267030 | AT5G20885.1 | 48.182 | 110 | 42 | 4 | 29 | 123 | 65 | 174 | 5.41e-27 | 99.0 |
| Msa1267030 | AT5G41400.1 | 44.828 | 58 | 27 | 2 | 42 | 99 | 102 | 154 | 2.01e-13 | 63.9 |
| Msa1267030 | AT2G01150.1 | 53.704 | 54 | 18 | 2 | 45 | 98 | 74 | 120 | 4.87e-13 | 62.0 |
| Msa1267030 | AT2G01150.3 | 53.704 | 54 | 18 | 2 | 45 | 98 | 100 | 146 | 6.61e-13 | 62.4 |
| Msa1267030 | AT2G01150.2 | 53.704 | 54 | 18 | 2 | 45 | 98 | 123 | 169 | 1.09e-12 | 62.0 |
| Msa1267030 | AT3G61460.1 | 32.222 | 90 | 37 | 3 | 9 | 98 | 76 | 141 | 1.12e-12 | 61.6 |
| Msa1267030 | AT4G00305.1 | 41.667 | 60 | 29 | 1 | 43 | 102 | 69 | 122 | 5.20e-12 | 58.9 |
| Msa1267030 | AT1G63840.1 | 43.077 | 65 | 31 | 3 | 34 | 98 | 79 | 137 | 1.23e-11 | 58.9 |
| Msa1267030 | AT3G05200.1 | 48.214 | 56 | 22 | 1 | 42 | 97 | 125 | 173 | 1.55e-11 | 60.5 |
| Msa1267030 | AT1G15100.1 | 45.714 | 70 | 29 | 3 | 45 | 114 | 86 | 146 | 2.19e-11 | 58.2 |
| Msa1267030 | AT3G60220.1 | 49.153 | 59 | 23 | 1 | 45 | 103 | 117 | 168 | 4.33e-11 | 58.9 |
Find 62 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACATGTGTCTTCTGTTTC+TGG | 0.130755 | 8_2:-72138495 | None:intergenic |
| TTAACTAAACCAAAGTTATA+TGG | 0.204982 | 8_2:-72135566 | None:intergenic |
| TTTGAGATTATGAGAGAAAA+AGG | 0.211700 | 8_2:-72133922 | None:intergenic |
| GACATTGCTCTCTTATTTGC+AGG | 0.232207 | 8_2:+72135541 | Msa1267030:five_prime_UTR |
| TGCCATGAATAGAGAACTTT+TGG | 0.267971 | 8_2:-72137045 | None:intergenic |
| TTCAGATCAACGTTCTTCTA+TGG | 0.273926 | 8_2:+72134314 | Msa1267030:intron |
| TTGTTTGAACAAGCTGAAAA+TGG | 0.301105 | 8_2:+72138521 | Msa1267030:CDS |
| TACCAAAAGTTCTCTATTCA+TGG | 0.349977 | 8_2:+72137043 | Msa1267030:CDS |
| CATGGCAAAGACCTCATAAT+TGG | 0.358933 | 8_2:+72137061 | Msa1267030:CDS |
| TAACTAAACCAAAGTTATAT+GGG | 0.371576 | 8_2:-72135565 | None:intergenic |
| TGTTTATGTTTATGTTTATG+AGG | 0.374300 | 8_2:-72134015 | None:intergenic |
| CTCTACAAAGTGGACAAGTT+TGG | 0.375846 | 8_2:-72138641 | None:intergenic |
| AACAAATTATTTAATTAAGA+AGG | 0.386010 | 8_2:-72138753 | None:intergenic |
| TTGCAGTTAGTGTGAGATAG+TGG | 0.386743 | 8_2:-72133896 | None:intergenic |
| TGAGGAAAGGGGTTTGAAGA+AGG | 0.394504 | 8_2:-72133997 | None:intergenic |
| CGACGATGGGTTGAAATTTG+TGG | 0.398929 | 8_2:-72137018 | None:intergenic |
| AATTTGACATTTACATTGGA+GGG | 0.418818 | 8_2:-72137103 | None:intergenic |
| ATTCACCTAGTCAACCTCAT+TGG | 0.420746 | 8_2:+72138688 | Msa1267030:CDS |
| TCATCATTTGTAGAAATTTG+AGG | 0.436127 | 8_2:+72134645 | Msa1267030:five_prime_UTR |
| TGTTTATGTTTATGAGGAAA+GGG | 0.439878 | 8_2:-72134009 | None:intergenic |
| CTTCTATGGATAGACAAATC+TGG | 0.440589 | 8_2:+72134328 | Msa1267030:five_prime_UTR |
| TTCACCTAGTCAACCTCATT+GGG | 0.441403 | 8_2:+72138689 | Msa1267030:CDS |
| TGGATAGACAAATCTGGCTA+TGG | 0.454461 | 8_2:+72134334 | Msa1267030:five_prime_UTR |
| AAACAATTCAAGGATGTTGA+TGG | 0.456425 | 8_2:+72135590 | Msa1267030:five_prime_UTR |
| TTGCAGGCCCCATATAACTT+TGG | 0.456758 | 8_2:+72135557 | Msa1267030:five_prime_UTR |
| GATGAAGGAACGCACAGAAC+AGG | 0.465124 | 8_2:+72134365 | Msa1267030:five_prime_UTR |
| TAGAGTGTATAAATTAAAGC+TGG | 0.465969 | 8_2:+72135486 | Msa1267030:intron |
| GAGAAGAAGAAACAATGAAA+GGG | 0.466623 | 8_2:-72133975 | None:intergenic |
| GGAGAAGAAGAAACAATGAA+AGG | 0.472386 | 8_2:-72133976 | None:intergenic |
| AAGTAAACGAAGAGAGAAGA+GGG | 0.480386 | 8_2:-72133945 | None:intergenic |
| TTTAGTTAAGAAACAATTCA+AGG | 0.484226 | 8_2:+72135580 | Msa1267030:five_prime_UTR |
| ATGTTTATGTTTATGAGGAA+AGG | 0.484789 | 8_2:-72134010 | None:intergenic |
| TCCACGGTACCTTTATGAAA+AGG | 0.499324 | 8_2:+72135645 | Msa1267030:exon |
| ATGGATAATATGTGTGCTCT+AGG | 0.502690 | 8_2:+72135618 | Msa1267030:five_prime_UTR |
| GCAGCCTCAACATGTATGGA+TGG | 0.510149 | 8_2:+72134825 | Msa1267030:intron |
| AAATTTGACATTTACATTGG+AGG | 0.512690 | 8_2:-72137104 | None:intergenic |
| CTGTGATCATGTGTTTCATA+AGG | 0.517073 | 8_2:+72138569 | Msa1267030:CDS |
| GGATAGACAAATCTGGCTAT+GGG | 0.538535 | 8_2:+72134335 | Msa1267030:five_prime_UTR |
| TCAAATCTGGTGTTGTAGAT+CGG | 0.543928 | 8_2:-72134117 | None:intergenic |
| AAGGATGTTGATGGTACAGA+TGG | 0.544451 | 8_2:+72135599 | Msa1267030:five_prime_UTR |
| GCTATGGGAAAGAATGATGA+AGG | 0.551874 | 8_2:+72134350 | Msa1267030:five_prime_UTR |
| AAGAATCTCGACCAATTATG+AGG | 0.554517 | 8_2:-72137072 | None:intergenic |
| GTTTATGTTTATGAGGAAAG+GGG | 0.570140 | 8_2:-72134008 | None:intergenic |
| TTGCCCATCCATACATGTTG+AGG | 0.572671 | 8_2:-72134829 | None:intergenic |
| TGCAGTTAGTGTGAGATAGT+GGG | 0.577153 | 8_2:-72133895 | None:intergenic |
| TTACTTACTTAAGAGCATCA+AGG | 0.577531 | 8_2:-72134868 | None:intergenic |
| TAGTCAACCTCATTGGGCTG+TGG | 0.577784 | 8_2:+72138695 | Msa1267030:CDS |
| AAAGTAAACGAAGAGAGAAG+AGG | 0.579543 | 8_2:-72133946 | None:intergenic |
| CAGCCTCAACATGTATGGAT+GGG | 0.583106 | 8_2:+72134826 | Msa1267030:intron |
| ATAAGGAATGCATAGAGAAG+TGG | 0.586287 | 8_2:+72138586 | Msa1267030:CDS |
| ATCAAAGGAGCTCTACAAAG+TGG | 0.596806 | 8_2:-72138651 | None:intergenic |
| AACTAAACCAAAGTTATATG+GGG | 0.603697 | 8_2:-72135564 | None:intergenic |
| ACAGCCCAATGAGGTTGACT+AGG | 0.604880 | 8_2:-72138693 | None:intergenic |
| CAAATAAGAGAGCAATGTCA+AGG | 0.610911 | 8_2:-72135537 | None:intergenic |
| TGTAGATCGGTGTTGTACAA+TGG | 0.627928 | 8_2:-72134104 | None:intergenic |
| ATAGAGAAGTGGTTGGAACA+TGG | 0.640834 | 8_2:+72138597 | Msa1267030:CDS |
| AGTCTTTCCACAGCCCAATG+AGG | 0.646393 | 8_2:-72138702 | None:intergenic |
| TGGGCAAATTAACATGTGGT+TGG | 0.646485 | 8_2:+72134845 | Msa1267030:five_prime_UTR |
| GGAATGCATAGAGAAGTGGT+TGG | 0.653546 | 8_2:+72138590 | Msa1267030:CDS |
| GTGTGCTCTAGGAATATCCA+CGG | 0.670350 | 8_2:+72135629 | Msa1267030:five_prime_UTR |
| ATAAAGAAGAATGAAGAACT+CGG | 0.678421 | 8_2:-72134057 | None:intergenic |
| TGGATGGGCAAATTAACATG+TGG | 0.763230 | 8_2:+72134841 | Msa1267030:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATAGATAAAATATAT+TGG | - | chr8_2:72136230-72136249 | None:intergenic | 10.0% |
| !!! | TTATTTTTGATCAGTTTTTT+TGG | + | chr8_2:72134076-72134095 | Msa1267030:five_prime_UTR | 15.0% |
| !!! | CAAAAATACCTTTTAAAAAA+TGG | - | chr8_2:72134523-72134542 | None:intergenic | 15.0% |
| !! | AATTCTTTAAATGAATTCTA+TGG | + | chr8_2:72134922-72134941 | Msa1267030:intron | 15.0% |
| !! | ATTCTTTAAATGAATTCTAT+GGG | + | chr8_2:72134923-72134942 | Msa1267030:intron | 15.0% |
| !! | AATTGAATGTATCTAAAAAA+TGG | + | chr8_2:72135929-72135948 | Msa1267030:intron | 15.0% |
| !!! | TATATTTTATCTATCAATTG+TGG | + | chr8_2:72136231-72136250 | Msa1267030:intron | 15.0% |
| !!! | TATGACAATGTTTTTTTTAA+TGG | + | chr8_2:72137339-72137358 | Msa1267030:intron | 15.0% |
| !!! | CAATTATCTTCTAAAAAATT+CGG | + | chr8_2:72137482-72137501 | Msa1267030:intron | 15.0% |
| !! | AGTTAAAATATTTCTTTGTT+GGG | + | chr8_2:72138214-72138233 | Msa1267030:intron | 15.0% |
| !! | TGTTTATGTTTATGTTTATG+AGG | - | chr8_2:72134018-72134037 | None:intergenic | 20.0% |
| !! | CTAAAGATTGAAAAAATAGA+GGG | - | chr8_2:72134272-72134291 | None:intergenic | 20.0% |
| !! | AAAAAAACGAAATTTGGATT+TGG | - | chr8_2:72134408-72134427 | None:intergenic | 20.0% |
| !! | ATGAGTAAAAAAACGAAATT+TGG | - | chr8_2:72134414-72134433 | None:intergenic | 20.0% |
| !!! | TTTAAAAAATGGCTTTGTAA+TGG | - | chr8_2:72134512-72134531 | None:intergenic | 20.0% |
| !!! | TTACAAAGCCATTTTTTAAA+AGG | + | chr8_2:72134512-72134531 | Msa1267030:five_prime_UTR | 20.0% |
| !! | ACATTTAATGTTAGAACAAA+GGG | - | chr8_2:72134693-72134712 | None:intergenic | 20.0% |
| !!! | CTATATTAACATTTTTTAGC+TGG | - | chr8_2:72134780-72134799 | None:intergenic | 20.0% |
| !! | TTCTTTAAATGAATTCTATG+GGG | + | chr8_2:72134924-72134943 | Msa1267030:intron | 20.0% |
| !! | TGAAATTTGCAAACATTAAT+TGG | - | chr8_2:72135091-72135110 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAAACTACACAAT+TGG | - | chr8_2:72135133-72135152 | None:intergenic | 20.0% |
| !! | TAACTAAACCAAAGTTATAT+GGG | - | chr8_2:72135568-72135587 | None:intergenic | 20.0% |
| !! | TTAACTAAACCAAAGTTATA+TGG | - | chr8_2:72135569-72135588 | None:intergenic | 20.0% |
| !! | TTTAGTTAAGAAACAATTCA+AGG | + | chr8_2:72135580-72135599 | Msa1267030:five_prime_UTR | 20.0% |
| !! | TAATGACTAAAAGATAGAAA+AGG | - | chr8_2:72135675-72135694 | None:intergenic | 20.0% |
| !! | AATTGAATGTATCTAAAAAG+TGG | - | chr8_2:72135868-72135887 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTAGTGAT+CGG | + | chr8_2:72135953-72135972 | Msa1267030:intron | 20.0% |
| !!! | ATTTTTATATTCCTCAAACA+CGG | + | chr8_2:72136064-72136083 | Msa1267030:intron | 20.0% |
| !!! | TTTTCATCATTTCTATATGA+TGG | + | chr8_2:72136738-72136757 | Msa1267030:intron | 20.0% |
| !! | TTTCATCATTTCTATATGAT+GGG | + | chr8_2:72136739-72136758 | Msa1267030:intron | 20.0% |
| !! | AAACATAGTAATACAATTGA+TGG | - | chr8_2:72136777-72136796 | None:intergenic | 20.0% |
| !! | ACAAATATAATCAATAGATG+TGG | + | chr8_2:72136823-72136842 | Msa1267030:intron | 20.0% |
| !! | ATTGTAATAAAAGAGGAAAT+AGG | - | chr8_2:72136990-72137009 | None:intergenic | 20.0% |
| !! | TTCAAATTTGACATTTACAT+TGG | - | chr8_2:72137110-72137129 | None:intergenic | 20.0% |
| !! | CATTGAAAAATATTACAACA+CGG | - | chr8_2:72137273-72137292 | None:intergenic | 20.0% |
| !! | TATAAAGATAGGAAAATGAT+AGG | + | chr8_2:72137653-72137672 | Msa1267030:intron | 20.0% |
| !! | CCATAAAAAATATATCTTAC+AGG | - | chr8_2:72138180-72138199 | None:intergenic | 20.0% |
| !!! | CCTGTAAGATATATTTTTTA+TGG | + | chr8_2:72138177-72138196 | Msa1267030:intron | 20.0% |
| !! | GAGTTAAAATATTTCTTTGT+TGG | + | chr8_2:72138213-72138232 | Msa1267030:intron | 20.0% |
| !!! | TCCTTTGATTAATAGTTTTT+GGG | + | chr8_2:72138665-72138684 | Msa1267030:CDS | 20.0% |
| !! | TTTGAGATTATGAGAGAAAA+AGG | - | chr8_2:72133925-72133944 | None:intergenic | 25.0% |
| ! | TGTTTATGTTTATGAGGAAA+GGG | - | chr8_2:72134012-72134031 | None:intergenic | 25.0% |
| ! | ATGTTTATGTTTATGAGGAA+AGG | - | chr8_2:72134013-72134032 | None:intergenic | 25.0% |
| ! | ATAAAGAAGAATGAAGAACT+CGG | - | chr8_2:72134060-72134079 | None:intergenic | 25.0% |
| !!! | AACACCAGATTTGATTTTTA+AGG | + | chr8_2:72134126-72134145 | Msa1267030:five_prime_UTR | 25.0% |
| !!! | ACACCAGATTTGATTTTTAA+GGG | + | chr8_2:72134127-72134146 | Msa1267030:five_prime_UTR | 25.0% |
| ! | TTACCCTTAAAAATCAAATC+TGG | - | chr8_2:72134133-72134152 | None:intergenic | 25.0% |
| ! | GCTAAAGATTGAAAAAATAG+AGG | - | chr8_2:72134273-72134292 | None:intergenic | 25.0% |
| ! | TCATCATTTGTAGAAATTTG+AGG | + | chr8_2:72134645-72134664 | Msa1267030:five_prime_UTR | 25.0% |
| ! | CACATTTAATGTTAGAACAA+AGG | - | chr8_2:72134694-72134713 | None:intergenic | 25.0% |
| ! | AACAATGAAGCAACTAAAAA+AGG | + | chr8_2:72134728-72134747 | Msa1267030:intron | 25.0% |
| ! | TAAAAAAGGATTATAGCTAG+AGG | + | chr8_2:72134742-72134761 | Msa1267030:intron | 25.0% |
| !!! | TTTTGGAATAAGTTCATACA+AGG | + | chr8_2:72134954-72134973 | Msa1267030:intron | 25.0% |
| ! | AATTTGCAAACATTAATTGG+TGG | - | chr8_2:72135088-72135107 | None:intergenic | 25.0% |
| ! | AGTTGTTTAATCTGAATGTT+GGG | + | chr8_2:72135450-72135469 | Msa1267030:intron | 25.0% |
| ! | TAGAGTGTATAAATTAAAGC+TGG | + | chr8_2:72135486-72135505 | Msa1267030:intron | 25.0% |
| ! | AACTAAACCAAAGTTATATG+GGG | - | chr8_2:72135567-72135586 | None:intergenic | 25.0% |
| !! | GTTTGTTTACGTAATTTTCA+AGG | - | chr8_2:72135722-72135741 | None:intergenic | 25.0% |
| ! | ATAAATGAGCAATCACAAAA+TGG | - | chr8_2:72135809-72135828 | None:intergenic | 25.0% |
| !! | TTTTTGCTTAAATTAGTGAC+CGG | - | chr8_2:72135844-72135863 | None:intergenic | 25.0% |
| !! | TTTTTATATTCCTCAAACAC+GGG | + | chr8_2:72136065-72136084 | Msa1267030:intron | 25.0% |
| ! | GGAGGTTATATGTATTTAAT+TGG | + | chr8_2:72136086-72136105 | Msa1267030:intron | 25.0% |
| ! | ATCAAATACCTATAGTTTGA+GGG | - | chr8_2:72136129-72136148 | None:intergenic | 25.0% |
| ! | AATCAAATACCTATAGTTTG+AGG | - | chr8_2:72136130-72136149 | None:intergenic | 25.0% |
| ! | TATGATATACACACACATAT+TGG | + | chr8_2:72136187-72136206 | Msa1267030:intron | 25.0% |
| ! | TTTATCTATCAATTGTGGTA+AGG | + | chr8_2:72136236-72136255 | Msa1267030:intron | 25.0% |
| !! | AATTGTGATAACGAAAAATG+AGG | + | chr8_2:72136323-72136342 | Msa1267030:intron | 25.0% |
| !!! | ATTCAATTTTAACCAAGAGA+GGG | - | chr8_2:72136438-72136457 | None:intergenic | 25.0% |
| ! | GATTTGTCAAGAAAAATAGT+TGG | + | chr8_2:72136476-72136495 | Msa1267030:intron | 25.0% |
| !!! | ACAATTTGTTCTAAGATGTT+TGG | + | chr8_2:72136512-72136531 | Msa1267030:intron | 25.0% |
| !! | ATAATTTGCATCTTTACTTG+AGG | + | chr8_2:72136879-72136898 | Msa1267030:intron | 25.0% |
| !!! | ATAGGTTGGTTTGTATATAT+TGG | - | chr8_2:72136972-72136991 | None:intergenic | 25.0% |
| ! | TAATAAAAGAGGAAATAGGT+TGG | - | chr8_2:72136986-72137005 | None:intergenic | 25.0% |
| !! | TCCTCTTTTATTACAATAAC+AGG | + | chr8_2:72136993-72137012 | Msa1267030:intron | 25.0% |
| !! | CCTCTTTTATTACAATAACA+GGG | + | chr8_2:72136994-72137013 | Msa1267030:intron | 25.0% |
| ! | AATTTGACATTTACATTGGA+GGG | - | chr8_2:72137106-72137125 | None:intergenic | 25.0% |
| ! | AAATTTGACATTTACATTGG+AGG | - | chr8_2:72137107-72137126 | None:intergenic | 25.0% |
| !!! | ACATTGAGTTGATCATAAAA+AGG | - | chr8_2:72137202-72137221 | None:intergenic | 25.0% |
| ! | TTATTACATGTGGTTAAACA+GGG | + | chr8_2:72137433-72137452 | Msa1267030:intron | 25.0% |
| !! | TTATCTTCTAAAAAATTCGG+AGG | + | chr8_2:72137485-72137504 | Msa1267030:intron | 25.0% |
| !! | TTTTCTCATCAGAAATTAAG+AGG | + | chr8_2:72137913-72137932 | Msa1267030:intron | 25.0% |
| ! | AAAAACATGGGAAAATACTT+GGG | + | chr8_2:72137976-72137995 | Msa1267030:intron | 25.0% |
| !! | CTCCTTTGATTAATAGTTTT+TGG | + | chr8_2:72138664-72138683 | Msa1267030:CDS | 25.0% |
| ! | TCCCAAAAACTATTAATCAA+AGG | - | chr8_2:72138669-72138688 | None:intergenic | 25.0% |
| !!! | GAAAGACTTTTTTATCTATG+TGG | + | chr8_2:72138717-72138736 | Msa1267030:CDS | 25.0% |
| GAGAAGAAGAAACAATGAAA+GGG | - | chr8_2:72133978-72133997 | None:intergenic | 30.0% | |
| GTTTATGTTTATGAGGAAAG+GGG | - | chr8_2:72134011-72134030 | None:intergenic | 30.0% | |
| ATTCCTGTCACAAAATAACT+TGG | - | chr8_2:72134608-72134627 | None:intergenic | 30.0% | |
| ! | ATTTTGTGACAGGAATTCAA+TGG | + | chr8_2:72134612-72134631 | Msa1267030:intron | 30.0% |
| !! | TTACTTACTTAAGAGCATCA+AGG | - | chr8_2:72134871-72134890 | None:intergenic | 30.0% |
| TTTCATGATATAGCTGTTAG+AGG | + | chr8_2:72135106-72135125 | Msa1267030:intron | 30.0% | |
| !! | TTTGTTGTTGAAACTCACAT+AGG | - | chr8_2:72135170-72135189 | None:intergenic | 30.0% |
| ! | GAAACTTTTGATGCTAGAAA+AGG | - | chr8_2:72135280-72135299 | None:intergenic | 30.0% |
| GAGTTGTTTAATCTGAATGT+TGG | + | chr8_2:72135449-72135468 | Msa1267030:intron | 30.0% | |
| AAACAATTCAAGGATGTTGA+TGG | + | chr8_2:72135590-72135609 | Msa1267030:five_prime_UTR | 30.0% | |
| !!! | AAAGGAGTACCTTTTCATAA+AGG | - | chr8_2:72135657-72135676 | None:intergenic | 30.0% |
| CATTTATATTATACACCCTC+CGG | + | chr8_2:72135822-72135841 | Msa1267030:intron | 30.0% | |
| CTTTAAATCCCTCAAACTAT+AGG | + | chr8_2:72136118-72136137 | Msa1267030:intron | 30.0% | |
| TAACGAAAAATGAGGTTTGA+CGG | + | chr8_2:72136331-72136350 | Msa1267030:intron | 30.0% | |
| !! | CATTCAATTTTAACCAAGAG+AGG | - | chr8_2:72136439-72136458 | None:intergenic | 30.0% |
| TACACATCAAATTGTTGAAG+TGG | + | chr8_2:72136614-72136633 | Msa1267030:intron | 30.0% | |
| ! | TGAAATTCTTTGATAGCAAG+TGG | + | chr8_2:72136669-72136688 | Msa1267030:intron | 30.0% |
| TATTGGAAAGATTCTCTTGA+TGG | - | chr8_2:72136955-72136974 | None:intergenic | 30.0% | |
| CCCTGTTATTGTAATAAAAG+AGG | - | chr8_2:72136997-72137016 | None:intergenic | 30.0% | |
| TACCAAAAGTTCTCTATTCA+TGG | + | chr8_2:72137043-72137062 | Msa1267030:CDS | 30.0% | |
| !! | TTGAGTTGATCATAAAAAGG+AGG | - | chr8_2:72137199-72137218 | None:intergenic | 30.0% |
| TGCAATTGCTCCAAATAATA+TGG | + | chr8_2:72137237-72137256 | Msa1267030:intron | 30.0% | |
| AATTGCTCCAAATAATATGG+TGG | + | chr8_2:72137240-72137259 | Msa1267030:intron | 30.0% | |
| ATCTCATCCACCATATTATT+TGG | - | chr8_2:72137250-72137269 | None:intergenic | 30.0% | |
| TGTTAGATCCTTATTACATG+TGG | + | chr8_2:72137423-72137442 | Msa1267030:intron | 30.0% | |
| CTGTTTAACCACATGTAATA+AGG | - | chr8_2:72137434-72137453 | None:intergenic | 30.0% | |
| CTTATTACATGTGGTTAAAC+AGG | + | chr8_2:72137432-72137451 | Msa1267030:intron | 30.0% | |
| TATTACATGTGGTTAAACAG+GGG | + | chr8_2:72137434-72137453 | Msa1267030:intron | 30.0% | |
| ACGTGATTATTAAATGTGTG+AGG | + | chr8_2:72137626-72137645 | Msa1267030:intron | 30.0% | |
| TGTGAGGACTTTATAAAGAT+AGG | + | chr8_2:72137642-72137661 | Msa1267030:intron | 30.0% | |
| ! | AACTTAAAAGAGTGATAGTG+AGG | - | chr8_2:72137745-72137764 | None:intergenic | 30.0% |
| ! | CAAGTATTTTCCCATGTTTT+TGG | - | chr8_2:72137977-72137996 | None:intergenic | 30.0% |
| CAAAAACATGGGAAAATACT+TGG | + | chr8_2:72137975-72137994 | Msa1267030:intron | 30.0% | |
| GTAGCTCAGATTTAATATCA+CGG | + | chr8_2:72138113-72138132 | Msa1267030:intron | 30.0% | |
| TTGTTTGAACAAGCTGAAAA+TGG | + | chr8_2:72138521-72138540 | Msa1267030:CDS | 30.0% | |
| AAGTAAACGAAGAGAGAAGA+GGG | - | chr8_2:72133948-72133967 | None:intergenic | 35.0% | |
| AAAGTAAACGAAGAGAGAAG+AGG | - | chr8_2:72133949-72133968 | None:intergenic | 35.0% | |
| GGAGAAGAAGAAACAATGAA+AGG | - | chr8_2:72133979-72133998 | None:intergenic | 35.0% | |
| !! | TCAAATCTGGTGTTGTAGAT+CGG | - | chr8_2:72134120-72134139 | None:intergenic | 35.0% |
| TTCAGATCAACGTTCTTCTA+TGG | + | chr8_2:72134314-72134333 | Msa1267030:intron | 35.0% | |
| CTTCTATGGATAGACAAATC+TGG | + | chr8_2:72134328-72134347 | Msa1267030:five_prime_UTR | 35.0% | |
| !!! | GGCTTTGTAATGGATTTTGT+TGG | - | chr8_2:72134502-72134521 | None:intergenic | 35.0% |
| !! | TAGCCAAGTTATTTTGTGAC+AGG | + | chr8_2:72134602-72134621 | Msa1267030:intron | 35.0% |
| !!! | TTTTTAGCTGGCATAAACCA+AGG | - | chr8_2:72134768-72134787 | None:intergenic | 35.0% |
| ! | TTCTATGGGGCTTAAGTTTT+TGG | + | chr8_2:72134937-72134956 | Msa1267030:intron | 35.0% |
| CTCTAGATCCTAATTGAATG+AGG | + | chr8_2:72135245-72135264 | Msa1267030:intron | 35.0% | |
| !! | GACAAGAAACCATTGGTTTA+TGG | + | chr8_2:72135362-72135381 | Msa1267030:intron | 35.0% |
| !! | ACCATTGGTTTATGGCTTAA+TGG | + | chr8_2:72135370-72135389 | Msa1267030:intron | 35.0% |
| TCCATTAAGCCATAAACCAA+TGG | - | chr8_2:72135374-72135393 | None:intergenic | 35.0% | |
| CAAATAAGAGAGCAATGTCA+AGG | - | chr8_2:72135540-72135559 | None:intergenic | 35.0% | |
| ATGGATAATATGTGTGCTCT+AGG | + | chr8_2:72135618-72135637 | Msa1267030:five_prime_UTR | 35.0% | |
| ! | AAAACATCGCAGGTATTGTT+TGG | - | chr8_2:72135779-72135798 | None:intergenic | 35.0% |
| AACGAAAAATGAGGTTTGAC+GGG | + | chr8_2:72136332-72136351 | Msa1267030:intron | 35.0% | |
| ! | GCTGCTATTGTTGCTTATTA+AGG | + | chr8_2:72136364-72136383 | Msa1267030:intron | 35.0% |
| TTCCAATTCCAAATTCTTCC+TGG | - | chr8_2:72136393-72136412 | None:intergenic | 35.0% | |
| ATATCAATTTCTCCCTCTCT+TGG | + | chr8_2:72136423-72136442 | Msa1267030:intron | 35.0% | |
| TCAAACATCATAGTCAGCAT+AGG | + | chr8_2:72136566-72136585 | Msa1267030:intron | 35.0% | |
| CAAACATCATAGTCAGCATA+GGG | + | chr8_2:72136567-72136586 | Msa1267030:intron | 35.0% | |
| AAACATCATAGTCAGCATAG+GGG | + | chr8_2:72136568-72136587 | Msa1267030:intron | 35.0% | |
| AAATTGTTGAAGTGGACCTT+TGG | + | chr8_2:72136622-72136641 | Msa1267030:intron | 35.0% | |
| ACTATGTTTATCCTCACTGT+TGG | + | chr8_2:72136788-72136807 | Msa1267030:intron | 35.0% | |
| TTTCAACTTAACCAACAGTG+AGG | - | chr8_2:72136802-72136821 | None:intergenic | 35.0% | |
| ! | AACTTTTGGTATTCGACGAT+GGG | - | chr8_2:72137034-72137053 | None:intergenic | 35.0% |
| ! | TGCCATGAATAGAGAACTTT+TGG | - | chr8_2:72137048-72137067 | None:intergenic | 35.0% |
| AAGAATCTCGACCAATTATG+AGG | - | chr8_2:72137075-72137094 | None:intergenic | 35.0% | |
| TAGAGAAGACATGAATAAGC+TGG | - | chr8_2:72137145-72137164 | None:intergenic | 35.0% | |
| ATTACATGTGGTTAAACAGG+GGG | + | chr8_2:72137435-72137454 | Msa1267030:intron | 35.0% | |
| ACATTTGTGTGGATGTCAAA+AGG | + | chr8_2:72137797-72137816 | Msa1267030:intron | 35.0% | |
| CATTTGTGTGGATGTCAAAA+GGG | + | chr8_2:72137798-72137817 | Msa1267030:intron | 35.0% | |
| GTAGTTAAGCAAGAATCAAG+AGG | + | chr8_2:72137871-72137890 | Msa1267030:intron | 35.0% | |
| TCAATGCACTCCAAAAACAT+GGG | + | chr8_2:72137964-72137983 | Msa1267030:intron | 35.0% | |
| ACAACACATACAACACATCT+GGG | - | chr8_2:72138060-72138079 | None:intergenic | 35.0% | |
| ATTTCTCCAAAACTCGTCAA+CGG | - | chr8_2:72138462-72138481 | None:intergenic | 35.0% | |
| CTGTGATCATGTGTTTCATA+AGG | + | chr8_2:72138569-72138588 | Msa1267030:CDS | 35.0% | |
| ATAAGGAATGCATAGAGAAG+TGG | + | chr8_2:72138586-72138605 | Msa1267030:CDS | 35.0% | |
| !! | TGTAGATCGGTGTTGTACAA+TGG | - | chr8_2:72134107-72134126 | None:intergenic | 40.0% |
| GAGAGATAAGCTATAACCAG+TGG | - | chr8_2:72134250-72134269 | None:intergenic | 40.0% | |
| TGGATAGACAAATCTGGCTA+TGG | + | chr8_2:72134334-72134353 | Msa1267030:five_prime_UTR | 40.0% | |
| GGATAGACAAATCTGGCTAT+GGG | + | chr8_2:72134335-72134354 | Msa1267030:five_prime_UTR | 40.0% | |
| GCTATGGGAAAGAATGATGA+AGG | + | chr8_2:72134350-72134369 | Msa1267030:five_prime_UTR | 40.0% | |
| ACAGAACAGGTATCAGAAGT+AGG | + | chr8_2:72134378-72134397 | Msa1267030:intron | 40.0% | |
| ! | TTTTGCAGCCTCAACATGTA+TGG | + | chr8_2:72134821-72134840 | Msa1267030:intron | 40.0% |
| TGGATGGGCAAATTAACATG+TGG | + | chr8_2:72134841-72134860 | Msa1267030:five_prime_UTR | 40.0% | |
| TGGGCAAATTAACATGTGGT+TGG | + | chr8_2:72134845-72134864 | Msa1267030:five_prime_UTR | 40.0% | |
| CTGAGAGAAATGAAGACAGT+GGG | - | chr8_2:72135044-72135063 | None:intergenic | 40.0% | |
| ACTGAGAGAAATGAAGACAG+TGG | - | chr8_2:72135045-72135064 | None:intergenic | 40.0% | |
| GATCCTAATTGAATGAGGTC+AGG | + | chr8_2:72135250-72135269 | Msa1267030:intron | 40.0% | |
| TGACCTGACCTCATTCAATT+AGG | - | chr8_2:72135256-72135275 | None:intergenic | 40.0% | |
| CAATGGTTTCTTGTCATGCT+TGG | - | chr8_2:72135357-72135376 | None:intergenic | 40.0% | |
| CAAGCATGACAAGAAACCAT+TGG | + | chr8_2:72135355-72135374 | Msa1267030:intron | 40.0% | |
| !! | CTAGCATCAAAAGTGTCATG+TGG | + | chr8_2:72135411-72135430 | Msa1267030:intron | 40.0% |
| ! | GACATTGCTCTCTTATTTGC+AGG | + | chr8_2:72135541-72135560 | Msa1267030:five_prime_UTR | 40.0% |
| !! | AAGGATGTTGATGGTACAGA+TGG | + | chr8_2:72135599-72135618 | Msa1267030:five_prime_UTR | 40.0% |
| TCCACGGTACCTTTATGAAA+AGG | + | chr8_2:72135645-72135664 | Msa1267030:exon | 40.0% | |
| !!! | ACCTTTTCATAAAGGTACCG+TGG | - | chr8_2:72135649-72135668 | None:intergenic | 40.0% |
| TGGAAATGAGAAAACATCGC+AGG | - | chr8_2:72135789-72135808 | None:intergenic | 40.0% | |
| TGCTTAAATTAGTGACCGGA+GGG | - | chr8_2:72135840-72135859 | None:intergenic | 40.0% | |
| TTGCTTAAATTAGTGACCGG+AGG | - | chr8_2:72135841-72135860 | None:intergenic | 40.0% | |
| TTATATTCCTCAAACACGGG+AGG | + | chr8_2:72136068-72136087 | Msa1267030:intron | 40.0% | |
| ! | TGCCAGGAAGAATTTGGAAT+TGG | + | chr8_2:72136388-72136407 | Msa1267030:intron | 40.0% |
| CTAAGATGTTTGGTATGTGC+AGG | + | chr8_2:72136522-72136541 | Msa1267030:intron | 40.0% | |
| AGCATAGGGGACTTAATATG+CGG | + | chr8_2:72136581-72136600 | Msa1267030:intron | 40.0% | |
| ! | GAACTTTTGGTATTCGACGA+TGG | - | chr8_2:72137035-72137054 | None:intergenic | 40.0% |
| CATGGCAAAGACCTCATAAT+TGG | + | chr8_2:72137061-72137080 | Msa1267030:CDS | 40.0% | |
| ACTTTGTACCATTGCTGATG+TGG | + | chr8_2:72137697-72137716 | Msa1267030:intron | 40.0% | |
| CTCAATGCACTCCAAAAACA+TGG | + | chr8_2:72137963-72137982 | Msa1267030:intron | 40.0% | |
| AGTCACCGTCACATTAAATC+TGG | + | chr8_2:72138007-72138026 | Msa1267030:intron | 40.0% | |
| GTCACCGTCACATTAAATCT+GGG | + | chr8_2:72138008-72138027 | Msa1267030:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr8_2:72138019-72138038 | Msa1267030:intron | 40.0% | |
| CACAACACATACAACACATC+TGG | - | chr8_2:72138061-72138080 | None:intergenic | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | + | chr8_2:72138061-72138080 | Msa1267030:intron | 40.0% | |
| !!! | CATGTTTTTGGGAAGCACTT+GGG | - | chr8_2:72138152-72138171 | None:intergenic | 40.0% |
| CAAGTGCTTCCCAAAAACAT+GGG | + | chr8_2:72138151-72138170 | Msa1267030:intron | 40.0% | |
| AAGTGCTTCCCAAAAACATG+GGG | + | chr8_2:72138152-72138171 | Msa1267030:intron | 40.0% | |
| !! | CAAGAGTGTTGTTGTTGGTT+TGG | - | chr8_2:72138426-72138445 | None:intergenic | 40.0% |
| AACCAACAACAACACTCTTG+TGG | + | chr8_2:72138426-72138445 | Msa1267030:intron | 40.0% | |
| ! | ATGTTACCGTTGACGAGTTT+TGG | + | chr8_2:72138453-72138472 | Msa1267030:intron | 40.0% |
| !!! | GACGAGTTTTGGAGAAATCA+AGG | + | chr8_2:72138464-72138483 | Msa1267030:intron | 40.0% |
| ATAGAGAAGTGGTTGGAACA+TGG | + | chr8_2:72138597-72138616 | Msa1267030:CDS | 40.0% | |
| CTCTACAAAGTGGACAAGTT+TGG | - | chr8_2:72138644-72138663 | None:intergenic | 40.0% | |
| ATCAAAGGAGCTCTACAAAG+TGG | - | chr8_2:72138654-72138673 | None:intergenic | 40.0% | |
| ATTCACCTAGTCAACCTCAT+TGG | + | chr8_2:72138688-72138707 | Msa1267030:CDS | 40.0% | |
| TTCACCTAGTCAACCTCATT+GGG | + | chr8_2:72138689-72138708 | Msa1267030:CDS | 40.0% | |
| TGAGGAAAGGGGTTTGAAGA+AGG | - | chr8_2:72134000-72134019 | None:intergenic | 45.0% | |
| CTATAACCAGTGGAACACGA+TGG | - | chr8_2:72134240-72134259 | None:intergenic | 45.0% | |
| AACCACTCTCTTACTCTCTC+TGG | + | chr8_2:72134447-72134466 | Msa1267030:intron | 45.0% | |
| AACCAGAGAGAGTAAGAGAG+TGG | - | chr8_2:72134452-72134471 | None:intergenic | 45.0% | |
| !! | TCTCTGGTTTGTTGTTGCTG+TGG | + | chr8_2:72134463-72134482 | Msa1267030:intron | 45.0% |
| !! | GGTTTGTTGTTGCTGTGGTT+AGG | + | chr8_2:72134468-72134487 | Msa1267030:intron | 45.0% |
| AGGATTATAGCTAGAGGCCT+TGG | + | chr8_2:72134748-72134767 | Msa1267030:intron | 45.0% | |
| CAGCCTCAACATGTATGGAT+GGG | + | chr8_2:72134826-72134845 | Msa1267030:intron | 45.0% | |
| TTGCCCATCCATACATGTTG+AGG | - | chr8_2:72134832-72134851 | None:intergenic | 45.0% | |
| TTGCAGGCCCCATATAACTT+TGG | + | chr8_2:72135557-72135576 | Msa1267030:five_prime_UTR | 45.0% | |
| !! | GTGTGCTCTAGGAATATCCA+CGG | + | chr8_2:72135629-72135648 | Msa1267030:five_prime_UTR | 45.0% |
| CATATAACCTCCCGTGTTTG+AGG | - | chr8_2:72136078-72136097 | None:intergenic | 45.0% | |
| ! | TGTTGCTTATTAAGGCTGCC+AGG | + | chr8_2:72136372-72136391 | Msa1267030:intron | 45.0% |
| TAAGGCTGCCAGGAAGAATT+TGG | + | chr8_2:72136382-72136401 | Msa1267030:intron | 45.0% | |
| GTTTGGTATGTGCAGGTATG+TGG | + | chr8_2:72136529-72136548 | Msa1267030:intron | 45.0% | |
| CTACATGCTAAGCTGTCCAA+AGG | - | chr8_2:72136641-72136660 | None:intergenic | 45.0% | |
| TGAGTCTGCAGGGATAAAGT+AGG | - | chr8_2:72136932-72136951 | None:intergenic | 45.0% | |
| !! | CGACGATGGGTTGAAATTTG+TGG | - | chr8_2:72137021-72137040 | None:intergenic | 45.0% |
| TACCATTGCTGATGTGGCAA+GGG | + | chr8_2:72137703-72137722 | Msa1267030:intron | 45.0% | |
| CCACACAAATGTGTGACACA+TGG | - | chr8_2:72137789-72137808 | None:intergenic | 45.0% | |
| CCATGTGTCACACATTTGTG+TGG | + | chr8_2:72137786-72137805 | Msa1267030:intron | 45.0% | |
| TTGTGTGGATGTCAAAAGGG+TGG | + | chr8_2:72137801-72137820 | Msa1267030:intron | 45.0% | |
| GTGGCCCAGATTTAATGTGA+CGG | - | chr8_2:72138015-72138034 | None:intergenic | 45.0% | |
| CACAACACAACACCTTTGTG+TGG | - | chr8_2:72138034-72138053 | None:intergenic | 45.0% | |
| !! | CACAAAGGTGTTGTGTTGTG+TGG | + | chr8_2:72138034-72138053 | Msa1267030:intron | 45.0% |
| CACATTGCCACACAACAACT+GGG | - | chr8_2:72138087-72138106 | None:intergenic | 45.0% | |
| ACACATTGCCACACAACAAC+TGG | - | chr8_2:72138088-72138107 | None:intergenic | 45.0% | |
| !!! | CCATGTTTTTGGGAAGCACT+TGG | - | chr8_2:72138153-72138172 | None:intergenic | 45.0% |
| CCAAGTGCTTCCCAAAAACA+TGG | + | chr8_2:72138150-72138169 | Msa1267030:intron | 45.0% | |
| AGTGCTTCCCAAAAACATGG+GGG | + | chr8_2:72138153-72138172 | Msa1267030:intron | 45.0% | |
| !! | GACCACAAGAGTGTTGTTGT+TGG | - | chr8_2:72138431-72138450 | None:intergenic | 45.0% |
| GCACATGTGTCTTCTGTTTC+TGG | - | chr8_2:72138498-72138517 | None:intergenic | 45.0% | |
| GGAATGCATAGAGAAGTGGT+TGG | + | chr8_2:72138590-72138609 | Msa1267030:CDS | 45.0% | |
| !!! | TATTAATTGTATTTTATATT+AGG | + | chr8_2:72138283-72138302 | Msa1267030:intron | 5.0% |
| ! | GTTGGTTCCAATCGGAGAGA+GGG | - | chr8_2:72134208-72134227 | None:intergenic | 50.0% |
| ! | AGTTGGTTCCAATCGGAGAG+AGG | - | chr8_2:72134209-72134228 | None:intergenic | 50.0% |
| TAACCAGTGGAACACGATGG+TGG | - | chr8_2:72134237-72134256 | None:intergenic | 50.0% | |
| GATGAAGGAACGCACAGAAC+AGG | + | chr8_2:72134365-72134384 | Msa1267030:five_prime_UTR | 50.0% | |
| GCAGCCTCAACATGTATGGA+TGG | + | chr8_2:72134825-72134844 | Msa1267030:intron | 50.0% | |
| !! | CTCTTGATGGTGAGTCTGCA+GGG | - | chr8_2:72136942-72136961 | None:intergenic | 50.0% |
| !! | TCTCTTGATGGTGAGTCTGC+AGG | - | chr8_2:72136943-72136962 | None:intergenic | 50.0% |
| GTACCATTGCTGATGTGGCA+AGG | + | chr8_2:72137702-72137721 | Msa1267030:intron | 50.0% | |
| TTCCCTTGCCACATCAGCAA+TGG | - | chr8_2:72137708-72137727 | None:intergenic | 50.0% | |
| GTGCTTCCCAAAAACATGGG+GGG | + | chr8_2:72138154-72138173 | Msa1267030:intron | 50.0% | |
| ! | TACAGGCCCCCCATGTTTTT+GGG | - | chr8_2:72138163-72138182 | None:intergenic | 50.0% |
| ! | TTACAGGCCCCCCATGTTTT+TGG | - | chr8_2:72138164-72138183 | None:intergenic | 50.0% |
| ! | TTTTCTTCCCGTGCGTTGCA+CGG | + | chr8_2:72138364-72138383 | Msa1267030:intron | 50.0% |
| ATTTACACCCGTGCAACGCA+CGG | - | chr8_2:72138375-72138394 | None:intergenic | 50.0% | |
| ACAGCCCAATGAGGTTGACT+AGG | - | chr8_2:72138696-72138715 | None:intergenic | 50.0% | |
| TAGTCAACCTCATTGGGCTG+TGG | + | chr8_2:72138695-72138714 | Msa1267030:CDS | 50.0% | |
| AGTCTTTCCACAGCCCAATG+AGG | - | chr8_2:72138705-72138724 | None:intergenic | 50.0% | |
| TATCCCTCCCTCTCTCCGAT+TGG | + | chr8_2:72134198-72134217 | Msa1267030:intron | 55.0% | |
| GTTCCAATCGGAGAGAGGGA+GGG | - | chr8_2:72134204-72134223 | None:intergenic | 55.0% | |
| CAGGTATGTGGCATGTGCGT+TGG | + | chr8_2:72136541-72136560 | Msa1267030:intron | 55.0% | |
| TGTGTGGCCCAGTTGTTGTG+TGG | + | chr8_2:72138077-72138096 | Msa1267030:intron | 55.0% | |
| TTTCTTCCCGTGCGTTGCAC+GGG | + | chr8_2:72138365-72138384 | Msa1267030:intron | 55.0% | |
| TTTACACCCGTGCAACGCAC+GGG | - | chr8_2:72138374-72138393 | None:intergenic | 55.0% | |
| GGTTCCAATCGGAGAGAGGG+AGG | - | chr8_2:72134205-72134224 | None:intergenic | 60.0% | |
| !! | GGCGGCGAGTTGGTTCCAAT+CGG | - | chr8_2:72134216-72134235 | None:intergenic | 60.0% |
| ! | CCAGTGGAACACGATGGTGG+CGG | - | chr8_2:72134234-72134253 | None:intergenic | 60.0% |
| !! | ACACGATGGTGGCGGCGAGT+TGG | - | chr8_2:72134226-72134245 | None:intergenic | 65.0% |
| CCGCCACCATCGTGTTCCAC+TGG | + | chr8_2:72134231-72134250 | Msa1267030:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72133897 | 72138761 | 72133897 | ID=Msa1267030;Name=Msa1267030 |
| chr8_2 | mRNA | 72133897 | 72138761 | 72133897 | ID=Msa1267030-mRNA-1;Parent=Msa1267030;Name=Msa1267030-mRNA-1;_AED=0.33;_eAED=0.33;_QI=631|0.71|0.75|1|0.14|0.25|8|0|126 |
| chr8_2 | exon | 72133897 | 72134148 | 72133897 | ID=Msa1267030-mRNA-1:exon:24322;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72134319 | 72134386 | 72134319 | ID=Msa1267030-mRNA-1:exon:24323;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72134490 | 72134533 | 72134490 | ID=Msa1267030-mRNA-1:exon:24324;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72134624 | 72134666 | 72134624 | ID=Msa1267030-mRNA-1:exon:24325;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72134829 | 72134882 | 72134829 | ID=Msa1267030-mRNA-1:exon:24326;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72135489 | 72135666 | 72135489 | ID=Msa1267030-mRNA-1:exon:24327;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72137015 | 72137111 | 72137015 | ID=Msa1267030-mRNA-1:exon:24328;Parent=Msa1267030-mRNA-1 |
| chr8_2 | exon | 72138486 | 72138761 | 72138486 | ID=Msa1267030-mRNA-1:exon:24329;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72133897 | 72134148 | 72133897 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72134319 | 72134386 | 72134319 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72134490 | 72134533 | 72134490 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72134624 | 72134666 | 72134624 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72134829 | 72134882 | 72134829 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | five_prime_UTR | 72135489 | 72135658 | 72135489 | ID=Msa1267030-mRNA-1:five_prime_utr;Parent=Msa1267030-mRNA-1 |
| chr8_2 | CDS | 72135659 | 72135666 | 72135659 | ID=Msa1267030-mRNA-1:cds;Parent=Msa1267030-mRNA-1 |
| chr8_2 | CDS | 72137015 | 72137111 | 72137015 | ID=Msa1267030-mRNA-1:cds;Parent=Msa1267030-mRNA-1 |
| chr8_2 | CDS | 72138486 | 72138761 | 72138486 | ID=Msa1267030-mRNA-1:cds;Parent=Msa1267030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
