Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268070 | XP_003614820.1 | 96.765 | 371 | 12 | 0 | 1 | 371 | 1 | 371 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268070 | sp|P39869|NIA_LOTJA | 81.283 | 374 | 67 | 2 | 1 | 371 | 1 | 374 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268070 | E7ELN7 | 96.765 | 371 | 12 | 0 | 1 | 371 | 1 | 371 | 0.0 | 752 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0721330 | Msa1268070 | 0.871615 | 5.971507e-67 | -8.615850e-47 |
| Msa0771130 | Msa1268070 | 0.902061 | 1.424533e-78 | -8.615850e-47 |
| Msa0809090 | Msa1268070 | 0.857279 | 1.819140e-62 | -8.615850e-47 |
| Msa0849780 | Msa1268070 | 0.889662 | 1.980976e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268070 | MtrunA17_Chr5g0424491 | 96.765 | 371 | 12 | 0 | 1 | 371 | 1 | 371 | 0.0 | 752 |
| Msa1268070 | MtrunA17_Chr3g0115151 | 75.641 | 312 | 76 | 0 | 60 | 371 | 4 | 315 | 2.24e-180 | 523 |
| Msa1268070 | MtrunA17_Chr3g0115131 | 67.655 | 371 | 114 | 4 | 1 | 371 | 1 | 365 | 3.75e-177 | 516 |
| Msa1268070 | MtrunA17_Chr6g0459641 | 37.607 | 234 | 135 | 5 | 90 | 316 | 20 | 249 | 9.25e-44 | 156 |
| Msa1268070 | MtrunA17_Chr7g0227151 | 39.053 | 169 | 95 | 2 | 157 | 321 | 30 | 194 | 2.77e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268070 | AT1G77760.1 | 64.912 | 399 | 112 | 3 | 1 | 371 | 1 | 399 | 0.0 | 545 |
| Msa1268070 | AT1G37130.1 | 67.677 | 396 | 103 | 4 | 1 | 371 | 1 | 396 | 0.0 | 538 |
| Msa1268070 | AT3G01910.1 | 38.397 | 237 | 139 | 4 | 90 | 321 | 20 | 254 | 2.10e-48 | 169 |
| Msa1268070 | AT3G01910.2 | 40.252 | 159 | 91 | 1 | 167 | 321 | 1 | 159 | 9.85e-31 | 119 |
| Msa1268070 | AT3G01910.3 | 43.434 | 99 | 54 | 1 | 223 | 321 | 6 | 102 | 1.47e-18 | 84.7 |
Find 128 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATCATTATAAGGATAAT+AGG | 0.194906 | 8_3:-951480 | Msa1268070:CDS |
| TGAAGTTGCCATTATTATTA+TGG | 0.198999 | 8_3:+952395 | None:intergenic |
| TATTATGGAGAAGAAAATTA+TGG | 0.224072 | 8_3:+952410 | None:intergenic |
| CTGAAAGGTTATTCATATTC+AGG | 0.243055 | 8_3:-950814 | Msa1268070:CDS |
| CAATCCTCCCAACGAGCTTT+TGG | 0.246878 | 8_3:+952003 | None:intergenic |
| GAGGCTTTGGCTCCGGATCA+TGG | 0.263201 | 8_3:-951598 | Msa1268070:CDS |
| TTTCTTCTCCATAATAATAA+TGG | 0.271321 | 8_3:-952403 | Msa1268070:exon |
| TTACCGGGAAACCCGGTTTC+AGG | 0.284009 | 8_3:+952298 | None:intergenic |
| GGCTCCGGATCATGGGTTTC+CGG | 0.289883 | 8_3:-951590 | Msa1268070:CDS |
| GGTGGTGGTGGGTCGAAATA+TGG | 0.293803 | 8_3:-951691 | Msa1268070:CDS |
| AAGTGTGAACGACGCCGTTT+AGG | 0.316093 | 8_3:+952349 | None:intergenic |
| TGATGGTCATTATCATTATA+AGG | 0.322443 | 8_3:-951488 | Msa1268070:CDS |
| AACAAAGCGTTGGTTTCAAC+TGG | 0.322986 | 8_3:-951843 | Msa1268070:CDS |
| CGAAATATGGAACTAGTATT+AGG | 0.323529 | 8_3:-951678 | Msa1268070:CDS |
| TGGGATTCAAACAAGGTCTA+AGG | 0.323543 | 8_3:-951755 | Msa1268070:CDS |
| CTGAAGGGATCTATGTTTAC+CGG | 0.358836 | 8_3:+952282 | None:intergenic |
| GATAAATCTACCTTCTTCAT+TGG | 0.359590 | 8_3:+951426 | None:intergenic |
| TGCTGTCCCAAAAGCTCGTT+GGG | 0.370244 | 8_3:-952010 | Msa1268070:CDS |
| AACTCGTTAATTATATATTC+TGG | 0.371494 | 8_3:+950919 | None:intergenic |
| TGACCTGAAACCGGGTTTCC+CGG | 0.372660 | 8_3:-952301 | Msa1268070:CDS |
| CATGCAGAACGGTGAGGCTT+TGG | 0.374076 | 8_3:-951611 | Msa1268070:CDS |
| ATCTTCGTCGTCGCTGCTGA+AGG | 0.380395 | 8_3:+952266 | None:intergenic |
| ATTATGGAGAAGAAAATTAT+GGG | 0.380752 | 8_3:+952411 | None:intergenic |
| GAAATATTCCTCATATGTTA+TGG | 0.380778 | 8_3:-950760 | Msa1268070:CDS |
| TCCGGTGAGGGTTATTATAC+CGG | 0.384041 | 8_3:-951572 | Msa1268070:CDS |
| GCTTCCATGGTCCGTCTCAC+AGG | 0.384505 | 8_3:-952126 | Msa1268070:CDS |
| GGTCCATGGTGAACCGGGTT+GGG | 0.398235 | 8_3:+951950 | None:intergenic |
| CGAGCCGGTCCATGGTGAAC+CGG | 0.399215 | 8_3:+951944 | None:intergenic |
| ACGAAGGAACGTTAGACAAC+TGG | 0.400482 | 8_3:-952161 | Msa1268070:CDS |
| TGCGTAGTCCATGAGTTTAT+AGG | 0.403402 | 8_3:+950850 | None:intergenic |
| GAGGATTTACCTGGTGGTGG+TGG | 0.404078 | 8_3:-951703 | Msa1268070:CDS |
| TTTCATCCATGACCTGAAAC+CGG | 0.413074 | 8_3:-952310 | Msa1268070:CDS |
| CGTCAATTCCGTAACCTAAA+CGG | 0.414260 | 8_3:-952363 | Msa1268070:CDS |
| CAAGTGTAACGGGTAATTCC+CGG | 0.416021 | 8_3:+951905 | None:intergenic |
| CAAAAGCTCGTTGGGAGGAT+TGG | 0.416617 | 8_3:-952002 | Msa1268070:CDS |
| CCCGTTACACTTGTTTGTGC+TGG | 0.432618 | 8_3:-951895 | Msa1268070:CDS |
| GGATGGTGAAATGGCTTAAG+AGG | 0.432668 | 8_3:-951534 | Msa1268070:CDS |
| AGGCTTTGGCTCCGGATCAT+GGG | 0.442345 | 8_3:-951597 | Msa1268070:CDS |
| TTATCATTATAAGGATAATA+GGG | 0.457933 | 8_3:-951479 | Msa1268070:CDS |
| GAACGGTGAGGCTTTGGCTC+CGG | 0.464015 | 8_3:-951605 | Msa1268070:CDS |
| GGATCATGGGTTTCCGGTGA+GGG | 0.464541 | 8_3:-951584 | Msa1268070:CDS |
| TTCATCCATGACCTGAAACC+GGG | 0.464711 | 8_3:-952309 | Msa1268070:CDS |
| AACTAAACCGGTTACTTCAA+CGG | 0.471248 | 8_3:+951978 | None:intergenic |
| GATTGGACCGTTGAAGTAAC+CGG | 0.472200 | 8_3:-951985 | Msa1268070:CDS |
| CGTACGTAGTGGATTGGAAC+TGG | 0.479252 | 8_3:+952042 | None:intergenic |
| TCGGTGGAAGGATGGTGAAA+TGG | 0.479289 | 8_3:-951543 | Msa1268070:CDS |
| GTCATGGATGAAATTGTTGC+TGG | 0.479408 | 8_3:+952320 | None:intergenic |
| GAACGACGCCGTTTAGGTTA+CGG | 0.479612 | 8_3:+952355 | None:intergenic |
| CCAGCACAAACAAGTGTAAC+GGG | 0.480410 | 8_3:+951895 | None:intergenic |
| CGGTCCATGGTGAACCGGGT+TGG | 0.492398 | 8_3:+951949 | None:intergenic |
| GGAAACCCGGTTTCAGGTCA+TGG | 0.493206 | 8_3:+952304 | None:intergenic |
| CCGGTGAGGGTTATTATACC+GGG | 0.496614 | 8_3:-951571 | Msa1268070:CDS |
| CGACGGTTCAACTTCCAAGT+TGG | 0.511207 | 8_3:+952200 | None:intergenic |
| AGGATTTACCTGGTGGTGGT+GGG | 0.512199 | 8_3:-951702 | Msa1268070:CDS |
| TCTTCGTCGTCGCTGCTGAA+GGG | 0.514170 | 8_3:+952267 | None:intergenic |
| CGTTCGTGAGTTTCCAAGCC+GGG | 0.516225 | 8_3:-951923 | Msa1268070:CDS |
| TGCATGAGACGTGGGAGGGG+TGG | 0.516544 | 8_3:+952081 | None:intergenic |
| TCTAACGTTCCTTCGTCGCG+TGG | 0.516561 | 8_3:+952168 | None:intergenic |
| ATTCAGGTGAGTTTAATTTG+AGG | 0.519667 | 8_3:-950798 | Msa1268070:CDS |
| CGTTTAGGTTACGGAATTGA+CGG | 0.520579 | 8_3:+952364 | None:intergenic |
| GTAACGGGTAATTCCCGGCT+TGG | 0.520644 | 8_3:+951910 | None:intergenic |
| TGGTGCATGAGACGTGGGAG+GGG | 0.521564 | 8_3:+952078 | None:intergenic |
| TACGGTGCTGAGGATTTACC+TGG | 0.529831 | 8_3:-951712 | Msa1268070:CDS |
| CTCACCGGAAACCCATGATC+CGG | 0.532230 | 8_3:+951586 | None:intergenic |
| GAGCCGGTCCATGGTGAACC+GGG | 0.533325 | 8_3:+951945 | None:intergenic |
| AGATCTTGCCTATAAACTCA+TGG | 0.535155 | 8_3:-950858 | Msa1268070:CDS |
| TCTATGTTTACCGGGAAACC+CGG | 0.536984 | 8_3:+952291 | None:intergenic |
| GTGACATGGCGTCGTAATCA+CGG | 0.538493 | 8_3:+950885 | None:intergenic |
| AATATGGAACTAGTATTAGG+AGG | 0.541960 | 8_3:-951675 | Msa1268070:CDS |
| TTTCAACTGGGGTGCTGCTG+CGG | 0.547214 | 8_3:-951830 | Msa1268070:CDS |
| CGGATCATGGGTTTCCGGTG+AGG | 0.552043 | 8_3:-951585 | Msa1268070:CDS |
| GCAGAACAAGCCAATGAAGA+AGG | 0.552383 | 8_3:-951436 | Msa1268070:intron |
| GCTGAGGATTTACCTGGTGG+TGG | 0.564616 | 8_3:-951706 | Msa1268070:CDS |
| GTGCTGTCCCAAAAGCTCGT+TGG | 0.567454 | 8_3:-952011 | Msa1268070:CDS |
| CCCGGTATAATAACCCTCAC+CGG | 0.568025 | 8_3:+951571 | None:intergenic |
| GGTCACACGAAACGCTTCCA+TGG | 0.570201 | 8_3:-952139 | Msa1268070:CDS |
| CAGAGAGCTTATACGCTGAA+AGG | 0.570346 | 8_3:-950829 | Msa1268070:CDS |
| GGGGTGGTTCTGAATTGAAA+GGG | 0.570522 | 8_3:+952097 | None:intergenic |
| TGGTTACGTACGTAGTGGAT+TGG | 0.570568 | 8_3:+952036 | None:intergenic |
| ACAAAGCGTTGGTTTCAACT+GGG | 0.578270 | 8_3:-951842 | Msa1268070:CDS |
| CTAACGTTCCTTCGTCGCGT+GGG | 0.579626 | 8_3:+952169 | None:intergenic |
| GTGTGTCCCGCACAGGTTGG+TGG | 0.583909 | 8_3:-950948 | Msa1268070:intron |
| CGAAGGAACGTTAGACAACT+GGG | 0.584932 | 8_3:-952160 | Msa1268070:CDS |
| ACCAGCACAAACAAGTGTAA+CGG | 0.584993 | 8_3:+951894 | None:intergenic |
| CACCACGTGCTTAAACGATG+TGG | 0.586044 | 8_3:-951775 | Msa1268070:CDS |
| ATATGGAACTAGTATTAGGA+GGG | 0.588083 | 8_3:-951674 | Msa1268070:CDS |
| TGAAGGGATCTATGTTTACC+GGG | 0.588783 | 8_3:+952283 | None:intergenic |
| TCGCGTGGGTCGAGAATCGA+CGG | 0.589246 | 8_3:+952183 | None:intergenic |
| CTTCCATGGTCCGTCTCACA+GGG | 0.590477 | 8_3:-952125 | Msa1268070:CDS |
| AGGGGTGGTTCTGAATTGAA+AGG | 0.592632 | 8_3:+952096 | None:intergenic |
| TGTTCTGCATCAACATGAGA+AGG | 0.592723 | 8_3:+951451 | None:intergenic |
| TTGGAAACTCACGAACGAGC+CGG | 0.593252 | 8_3:+951929 | None:intergenic |
| CTGCGGTTTCGAACTCCGTG+TGG | 0.594877 | 8_3:-951813 | Msa1268070:CDS |
| CAACCCGGTTCACCATGGAC+CGG | 0.597430 | 8_3:-951948 | Msa1268070:CDS |
| TATTAGGAGGGAAATTGCGA+TGG | 0.597837 | 8_3:-951662 | Msa1268070:CDS |
| TCGTTCGTGAGTTTCCAAGC+CGG | 0.600291 | 8_3:-951924 | Msa1268070:CDS |
| TTTCCCTGTGAGACGGACCA+TGG | 0.600709 | 8_3:+952122 | None:intergenic |
| GGGATTCAAACAAGGTCTAA+GGG | 0.605373 | 8_3:-951754 | Msa1268070:CDS |
| AAGGGTGTTTCCCTGTGAGA+CGG | 0.606333 | 8_3:+952115 | None:intergenic |
| GTTTCGAACTCCGTGTGGCG+CGG | 0.608074 | 8_3:-951808 | Msa1268070:CDS |
| GGCAAGATCTCATCGTGACA+TGG | 0.608438 | 8_3:+950871 | None:intergenic |
| AACATGGTGAAACAAAGCGT+TGG | 0.609781 | 8_3:-951853 | Msa1268070:CDS |
| TATTTCGACCCACCACCACC+AGG | 0.611862 | 8_3:+951694 | None:intergenic |
| AACGATGTGGGATTCAAACA+AGG | 0.617004 | 8_3:-951762 | Msa1268070:CDS |
| ACCACGTGCTTAAACGATGT+GGG | 0.620383 | 8_3:-951774 | Msa1268070:CDS |
| TCATGGATGAAATTGTTGCT+GGG | 0.621760 | 8_3:+952321 | None:intergenic |
| TGCTTACATGCAGAACGGTG+AGG | 0.622429 | 8_3:-951617 | Msa1268070:CDS |
| ATTCTTGCTTACATGCAGAA+CGG | 0.623941 | 8_3:-951622 | Msa1268070:CDS |
| GTGGTGCATGAGACGTGGGA+GGG | 0.628338 | 8_3:+952077 | None:intergenic |
| ATTCTCGACCCACGCGACGA+AGG | 0.628737 | 8_3:-952177 | Msa1268070:CDS |
| AAACCGTGGTGCATGAGACG+TGG | 0.629848 | 8_3:+952072 | None:intergenic |
| ATTCATGGAGATTCGATGCG+TGG | 0.631020 | 8_3:+952235 | None:intergenic |
| AAACCCAACCCGGTTCACCA+TGG | 0.631239 | 8_3:-951953 | Msa1268070:CDS |
| CGTGGTGCATGAGACGTGGG+AGG | 0.631279 | 8_3:+952076 | None:intergenic |
| ATCCACTACGTACGTAACCA+CGG | 0.632996 | 8_3:-952033 | Msa1268070:CDS |
| CAAAGCGTTGGTTTCAACTG+GGG | 0.633107 | 8_3:-951841 | Msa1268070:CDS |
| ATCCTTCCACCGATAAAACC+CGG | 0.635715 | 8_3:+951553 | None:intergenic |
| GCAAGAATAACATCACGAGA+AGG | 0.636695 | 8_3:+951637 | None:intergenic |
| CAGACGTAAAGAACAAAACA+TGG | 0.641171 | 8_3:-951869 | Msa1268070:CDS |
| CACCGTGGTTACGTACGTAG+TGG | 0.642875 | 8_3:+952031 | None:intergenic |
| TCCCACATCGTTTAAGCACG+TGG | 0.642971 | 8_3:+951773 | None:intergenic |
| CTCCCACGTCTCATGCACCA+CGG | 0.644406 | 8_3:-952075 | Msa1268070:CDS |
| ATGACCATCACATTCATCAG+TGG | 0.676426 | 8_3:+951501 | None:intergenic |
| TGTCCCAAAAGCTCGTTGGG+AGG | 0.683469 | 8_3:-952007 | Msa1268070:CDS |
| GTTACCACTGATGAATGTGA+TGG | 0.714704 | 8_3:-951505 | Msa1268070:CDS |
| AACCGTGGTGCATGAGACGT+GGG | 0.717162 | 8_3:+952073 | None:intergenic |
| GGTGCTGAGGATTTACCTGG+TGG | 0.735767 | 8_3:-951709 | Msa1268070:CDS |
| GAACTGGAGTGATGAAACCG+TGG | 0.773422 | 8_3:+952058 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAATAACCAATATTAA+GGG | + | chr8_3:952101-952120 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATATAAGGAA+TGG | + | chr8_3:952144-952163 | None:intergenic | 10.0% |
| !! | TAATTAATAACCAATATTAA+GGG | + | chr8_3:952101-952120 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATATAAGGAA+TGG | + | chr8_3:952144-952163 | None:intergenic | 10.0% |
| !! | ATTATCATTATAAGGATAAT+AGG | - | chr8_3:951725-951744 | Msa1268070:CDS | 15.0% |
| !! | TTATCATTATAAGGATAATA+GGG | - | chr8_3:951726-951745 | Msa1268070:CDS | 15.0% |
| !! | CTAATTAATAACCAATATTA+AGG | + | chr8_3:952102-952121 | None:intergenic | 15.0% |
| !!! | CTTAATATTGGTTATTAATT+AGG | - | chr8_3:952100-952119 | Msa1268070:CDS | 15.0% |
| !! | ATGGCAAAAAAAAAAATATA+AGG | + | chr8_3:952149-952168 | None:intergenic | 15.0% |
| !! | ATTATCATTATAAGGATAAT+AGG | - | chr8_3:951725-951744 | Msa1268070:CDS | 15.0% |
| !! | TTATCATTATAAGGATAATA+GGG | - | chr8_3:951726-951745 | Msa1268070:CDS | 15.0% |
| !! | CTAATTAATAACCAATATTA+AGG | + | chr8_3:952102-952121 | None:intergenic | 15.0% |
| !!! | CTTAATATTGGTTATTAATT+AGG | - | chr8_3:952100-952119 | Msa1268070:CDS | 15.0% |
| !! | ATGGCAAAAAAAAAAATATA+AGG | + | chr8_3:952149-952168 | None:intergenic | 15.0% |
| !! | ATTATGGAGAAGAAAATTAT+GGG | + | chr8_3:950797-950816 | None:intergenic | 20.0% |
| !! | TATTATGGAGAAGAAAATTA+TGG | + | chr8_3:950798-950817 | None:intergenic | 20.0% |
| !! | TTTCTTCTCCATAATAATAA+TGG | - | chr8_3:950802-950821 | Msa1268070:CDS | 20.0% |
| !! | AGATTTATCCTACTTATTAT+TGG | - | chr8_3:951793-951812 | Msa1268070:CDS | 20.0% |
| !!! | AAAATATGTCTTTTCTTGTT+AGG | + | chr8_3:951912-951931 | None:intergenic | 20.0% |
| !! | TTGATCTTGAATATATTAGA+TGG | - | chr8_3:951956-951975 | Msa1268070:CDS | 20.0% |
| !! | TTGCATTTAACATAAAACAA+TGG | + | chr8_3:952168-952187 | None:intergenic | 20.0% |
| !! | AACTCGTTAATTATATATTC+TGG | + | chr8_3:952289-952308 | None:intergenic | 20.0% |
| !! | ATTATGGAGAAGAAAATTAT+GGG | + | chr8_3:950797-950816 | None:intergenic | 20.0% |
| !! | TATTATGGAGAAGAAAATTA+TGG | + | chr8_3:950798-950817 | None:intergenic | 20.0% |
| !! | TTTCTTCTCCATAATAATAA+TGG | - | chr8_3:950802-950821 | Msa1268070:CDS | 20.0% |
| !! | AGATTTATCCTACTTATTAT+TGG | - | chr8_3:951793-951812 | Msa1268070:CDS | 20.0% |
| !!! | AAAATATGTCTTTTCTTGTT+AGG | + | chr8_3:951912-951931 | None:intergenic | 20.0% |
| !! | TTGATCTTGAATATATTAGA+TGG | - | chr8_3:951956-951975 | Msa1268070:CDS | 20.0% |
| !! | TTGCATTTAACATAAAACAA+TGG | + | chr8_3:952168-952187 | None:intergenic | 20.0% |
| !! | AACTCGTTAATTATATATTC+TGG | + | chr8_3:952289-952308 | None:intergenic | 20.0% |
| ! | TGAAGTTGCCATTATTATTA+TGG | + | chr8_3:950813-950832 | None:intergenic | 25.0% |
| ! | TGATGGTCATTATCATTATA+AGG | - | chr8_3:951717-951736 | Msa1268070:CDS | 25.0% |
| ! | ACTATGATCCAATAATAAGT+AGG | + | chr8_3:951804-951823 | None:intergenic | 25.0% |
| !!! | TGGATCATAGTTTTAAATTG+CGG | - | chr8_3:951813-951832 | Msa1268070:CDS | 25.0% |
| ! | CAATACAAAACCCTTAATAT+TGG | - | chr8_3:952088-952107 | Msa1268070:CDS | 25.0% |
| !!! | TTTTGATTTGCTTTTACCTA+AGG | - | chr8_3:952207-952226 | Msa1268070:CDS | 25.0% |
| ! | GAAATATTCCTCATATGTTA+TGG | - | chr8_3:952445-952464 | Msa1268070:five_prime_UTR | 25.0% |
| ! | TGAAGTTGCCATTATTATTA+TGG | + | chr8_3:950813-950832 | None:intergenic | 25.0% |
| ! | TGATGGTCATTATCATTATA+AGG | - | chr8_3:951717-951736 | Msa1268070:CDS | 25.0% |
| ! | ACTATGATCCAATAATAAGT+AGG | + | chr8_3:951804-951823 | None:intergenic | 25.0% |
| !!! | TGGATCATAGTTTTAAATTG+CGG | - | chr8_3:951813-951832 | Msa1268070:CDS | 25.0% |
| ! | CAATACAAAACCCTTAATAT+TGG | - | chr8_3:952088-952107 | Msa1268070:CDS | 25.0% |
| !!! | TTTTGATTTGCTTTTACCTA+AGG | - | chr8_3:952207-952226 | Msa1268070:CDS | 25.0% |
| ! | GAAATATTCCTCATATGTTA+TGG | - | chr8_3:952445-952464 | Msa1268070:five_prime_UTR | 25.0% |
| !! | TGGTTTTTCGGATTAATTCA+TGG | + | chr8_3:950988-951007 | None:intergenic | 30.0% |
| ATTAATCCGAAAAACCAACT+TGG | - | chr8_3:950991-951010 | Msa1268070:intron | 30.0% | |
| !!! | GCTGTTCATGTTTGTTTTTA+CGG | - | chr8_3:951475-951494 | Msa1268070:CDS | 30.0% |
| CGAAATATGGAACTAGTATT+AGG | - | chr8_3:951527-951546 | Msa1268070:CDS | 30.0% | |
| AATATGGAACTAGTATTAGG+AGG | - | chr8_3:951530-951549 | Msa1268070:CDS | 30.0% | |
| ATATGGAACTAGTATTAGGA+GGG | - | chr8_3:951531-951550 | Msa1268070:CDS | 30.0% | |
| !! | GTTATTATACCGGGTTTTAT+CGG | - | chr8_3:951643-951662 | Msa1268070:CDS | 30.0% |
| GATAAATCTACCTTCTTCAT+TGG | + | chr8_3:951782-951801 | None:intergenic | 30.0% | |
| TGAAACACAAATACGAACAT+CGG | - | chr8_3:952004-952023 | Msa1268070:CDS | 30.0% | |
| CTGAAAGGTTATTCATATTC+AGG | - | chr8_3:952391-952410 | Msa1268070:exon | 30.0% | |
| !! | ATTCAGGTGAGTTTAATTTG+AGG | - | chr8_3:952407-952426 | Msa1268070:five_prime_UTR | 30.0% |
| ! | CATGTTTTCCATAACATATG+AGG | + | chr8_3:952456-952475 | None:intergenic | 30.0% |
| !! | TGGTTTTTCGGATTAATTCA+TGG | + | chr8_3:950988-951007 | None:intergenic | 30.0% |
| ATTAATCCGAAAAACCAACT+TGG | - | chr8_3:950991-951010 | Msa1268070:intron | 30.0% | |
| !!! | GCTGTTCATGTTTGTTTTTA+CGG | - | chr8_3:951475-951494 | Msa1268070:CDS | 30.0% |
| CGAAATATGGAACTAGTATT+AGG | - | chr8_3:951527-951546 | Msa1268070:CDS | 30.0% | |
| AATATGGAACTAGTATTAGG+AGG | - | chr8_3:951530-951549 | Msa1268070:CDS | 30.0% | |
| ATATGGAACTAGTATTAGGA+GGG | - | chr8_3:951531-951550 | Msa1268070:CDS | 30.0% | |
| !! | GTTATTATACCGGGTTTTAT+CGG | - | chr8_3:951643-951662 | Msa1268070:CDS | 30.0% |
| GATAAATCTACCTTCTTCAT+TGG | + | chr8_3:951782-951801 | None:intergenic | 30.0% | |
| TGAAACACAAATACGAACAT+CGG | - | chr8_3:952004-952023 | Msa1268070:CDS | 30.0% | |
| CTGAAAGGTTATTCATATTC+AGG | - | chr8_3:952391-952410 | Msa1268070:exon | 30.0% | |
| !! | ATTCAGGTGAGTTTAATTTG+AGG | - | chr8_3:952407-952426 | Msa1268070:five_prime_UTR | 30.0% |
| ! | CATGTTTTCCATAACATATG+AGG | + | chr8_3:952456-952475 | None:intergenic | 30.0% |
| !!! | TCCTTCCTTTCTCACTTTTT+GGG | + | chr8_3:950742-950761 | None:intergenic | 35.0% |
| TCATGGATGAAATTGTTGCT+GGG | + | chr8_3:950887-950906 | None:intergenic | 35.0% | |
| !!! | CAACTTCCAAGTTGGTTTTT+CGG | + | chr8_3:951000-951019 | None:intergenic | 35.0% |
| AACTAAACCGGTTACTTCAA+CGG | + | chr8_3:951230-951249 | None:intergenic | 35.0% | |
| !! | GGTTGGGTTTTTAACTAAAC+CGG | + | chr8_3:951242-951261 | None:intergenic | 35.0% |
| GTTTAGTTAAAAACCCAACC+CGG | - | chr8_3:951242-951261 | Msa1268070:intron | 35.0% | |
| CAGACGTAAAGAACAAAACA+TGG | - | chr8_3:951336-951355 | Msa1268070:intron | 35.0% | |
| ATTCTTGCTTACATGCAGAA+CGG | - | chr8_3:951583-951602 | Msa1268070:CDS | 35.0% | |
| TGACAGTCACAACTTATTCA+AGG | + | chr8_3:951856-951875 | None:intergenic | 35.0% | |
| TGCACAGACATCTCTAATAA+TGG | + | chr8_3:952060-952079 | None:intergenic | 35.0% | |
| GAATACAAGACAAAAGCCTT+AGG | + | chr8_3:952226-952245 | None:intergenic | 35.0% | |
| AGATCTTGCCTATAAACTCA+TGG | - | chr8_3:952347-952366 | Msa1268070:CDS | 35.0% | |
| !!! | TCCTTCCTTTCTCACTTTTT+GGG | + | chr8_3:950742-950761 | None:intergenic | 35.0% |
| TCATGGATGAAATTGTTGCT+GGG | + | chr8_3:950887-950906 | None:intergenic | 35.0% | |
| !!! | CAACTTCCAAGTTGGTTTTT+CGG | + | chr8_3:951000-951019 | None:intergenic | 35.0% |
| AACTAAACCGGTTACTTCAA+CGG | + | chr8_3:951230-951249 | None:intergenic | 35.0% | |
| !! | GGTTGGGTTTTTAACTAAAC+CGG | + | chr8_3:951242-951261 | None:intergenic | 35.0% |
| GTTTAGTTAAAAACCCAACC+CGG | - | chr8_3:951242-951261 | Msa1268070:intron | 35.0% | |
| CAGACGTAAAGAACAAAACA+TGG | - | chr8_3:951336-951355 | Msa1268070:intron | 35.0% | |
| ATTCTTGCTTACATGCAGAA+CGG | - | chr8_3:951583-951602 | Msa1268070:CDS | 35.0% | |
| TGACAGTCACAACTTATTCA+AGG | + | chr8_3:951856-951875 | None:intergenic | 35.0% | |
| TGCACAGACATCTCTAATAA+TGG | + | chr8_3:952060-952079 | None:intergenic | 35.0% | |
| GAATACAAGACAAAAGCCTT+AGG | + | chr8_3:952226-952245 | None:intergenic | 35.0% | |
| AGATCTTGCCTATAAACTCA+TGG | - | chr8_3:952347-952366 | Msa1268070:CDS | 35.0% | |
| !!! | CTTTCTCACTTTTTGGGTAG+TGG | + | chr8_3:950736-950755 | None:intergenic | 40.0% |
| CACTACCCAAAAAGTGAGAA+AGG | - | chr8_3:950734-950753 | Msa1268070:CDS | 40.0% | |
| ACCCAAAAAGTGAGAAAGGA+AGG | - | chr8_3:950738-950757 | Msa1268070:CDS | 40.0% | |
| !! | CTCCTTCCTTTCTCACTTTT+TGG | + | chr8_3:950743-950762 | None:intergenic | 40.0% |
| CAAAAAGTGAGAAAGGAAGG+AGG | - | chr8_3:950741-950760 | Msa1268070:CDS | 40.0% | |
| ! | CGTTTAGGTTACGGAATTGA+CGG | + | chr8_3:950844-950863 | None:intergenic | 40.0% |
| CGTCAATTCCGTAACCTAAA+CGG | - | chr8_3:950842-950861 | Msa1268070:CDS | 40.0% | |
| GTCATGGATGAAATTGTTGC+TGG | + | chr8_3:950888-950907 | None:intergenic | 40.0% | |
| TTTCATCCATGACCTGAAAC+CGG | - | chr8_3:950895-950914 | Msa1268070:CDS | 40.0% | |
| TGAAGGGATCTATGTTTACC+GGG | + | chr8_3:950925-950944 | None:intergenic | 40.0% | |
| CTGAAGGGATCTATGTTTAC+CGG | + | chr8_3:950926-950945 | None:intergenic | 40.0% | |
| ACCAGCACAAACAAGTGTAA+CGG | + | chr8_3:951314-951333 | None:intergenic | 40.0% | |
| AACATGGTGAAACAAAGCGT+TGG | - | chr8_3:951352-951371 | Msa1268070:intron | 40.0% | |
| !! | AACAAAGCGTTGGTTTCAAC+TGG | - | chr8_3:951362-951381 | Msa1268070:intron | 40.0% |
| !! | ACAAAGCGTTGGTTTCAACT+GGG | - | chr8_3:951363-951382 | Msa1268070:intron | 40.0% |
| AACGATGTGGGATTCAAACA+AGG | - | chr8_3:951443-951462 | Msa1268070:CDS | 40.0% | |
| TGGGATTCAAACAAGGTCTA+AGG | - | chr8_3:951450-951469 | Msa1268070:CDS | 40.0% | |
| GGGATTCAAACAAGGTCTAA+GGG | - | chr8_3:951451-951470 | Msa1268070:CDS | 40.0% | |
| !!! | TGTTTGTTTTTACGGTGCTG+AGG | - | chr8_3:951483-951502 | Msa1268070:CDS | 40.0% |
| TATTAGGAGGGAAATTGCGA+TGG | - | chr8_3:951543-951562 | Msa1268070:CDS | 40.0% | |
| GCAAGAATAACATCACGAGA+AGG | + | chr8_3:951571-951590 | None:intergenic | 40.0% | |
| !! | ATTATACCGGGTTTTATCGG+TGG | - | chr8_3:951646-951665 | Msa1268070:CDS | 40.0% |
| GTTACCACTGATGAATGTGA+TGG | - | chr8_3:951700-951719 | Msa1268070:CDS | 40.0% | |
| ATGACCATCACATTCATCAG+TGG | + | chr8_3:951707-951726 | None:intergenic | 40.0% | |
| TGTTCTGCATCAACATGAGA+AGG | + | chr8_3:951757-951776 | None:intergenic | 40.0% | |
| ACTGTCACATCTCGATCAAA+TGG | - | chr8_3:951869-951888 | Msa1268070:CDS | 40.0% | |
| TCTCTAATAATGGCGTGTTC+TGG | + | chr8_3:952050-952069 | None:intergenic | 40.0% | |
| TGCGTAGTCCATGAGTTTAT+AGG | + | chr8_3:952358-952377 | None:intergenic | 40.0% | |
| !!! | CTTTCTCACTTTTTGGGTAG+TGG | + | chr8_3:950736-950755 | None:intergenic | 40.0% |
| CACTACCCAAAAAGTGAGAA+AGG | - | chr8_3:950734-950753 | Msa1268070:CDS | 40.0% | |
| ACCCAAAAAGTGAGAAAGGA+AGG | - | chr8_3:950738-950757 | Msa1268070:CDS | 40.0% | |
| !! | CTCCTTCCTTTCTCACTTTT+TGG | + | chr8_3:950743-950762 | None:intergenic | 40.0% |
| CAAAAAGTGAGAAAGGAAGG+AGG | - | chr8_3:950741-950760 | Msa1268070:CDS | 40.0% | |
| ! | CGTTTAGGTTACGGAATTGA+CGG | + | chr8_3:950844-950863 | None:intergenic | 40.0% |
| CGTCAATTCCGTAACCTAAA+CGG | - | chr8_3:950842-950861 | Msa1268070:CDS | 40.0% | |
| GTCATGGATGAAATTGTTGC+TGG | + | chr8_3:950888-950907 | None:intergenic | 40.0% | |
| TTTCATCCATGACCTGAAAC+CGG | - | chr8_3:950895-950914 | Msa1268070:CDS | 40.0% | |
| TGAAGGGATCTATGTTTACC+GGG | + | chr8_3:950925-950944 | None:intergenic | 40.0% | |
| CTGAAGGGATCTATGTTTAC+CGG | + | chr8_3:950926-950945 | None:intergenic | 40.0% | |
| ACCAGCACAAACAAGTGTAA+CGG | + | chr8_3:951314-951333 | None:intergenic | 40.0% | |
| AACATGGTGAAACAAAGCGT+TGG | - | chr8_3:951352-951371 | Msa1268070:intron | 40.0% | |
| !! | AACAAAGCGTTGGTTTCAAC+TGG | - | chr8_3:951362-951381 | Msa1268070:intron | 40.0% |
| !! | ACAAAGCGTTGGTTTCAACT+GGG | - | chr8_3:951363-951382 | Msa1268070:intron | 40.0% |
| AACGATGTGGGATTCAAACA+AGG | - | chr8_3:951443-951462 | Msa1268070:CDS | 40.0% | |
| TGGGATTCAAACAAGGTCTA+AGG | - | chr8_3:951450-951469 | Msa1268070:CDS | 40.0% | |
| GGGATTCAAACAAGGTCTAA+GGG | - | chr8_3:951451-951470 | Msa1268070:CDS | 40.0% | |
| !!! | TGTTTGTTTTTACGGTGCTG+AGG | - | chr8_3:951483-951502 | Msa1268070:CDS | 40.0% |
| TATTAGGAGGGAAATTGCGA+TGG | - | chr8_3:951543-951562 | Msa1268070:CDS | 40.0% | |
| GCAAGAATAACATCACGAGA+AGG | + | chr8_3:951571-951590 | None:intergenic | 40.0% | |
| !! | ATTATACCGGGTTTTATCGG+TGG | - | chr8_3:951646-951665 | Msa1268070:CDS | 40.0% |
| GTTACCACTGATGAATGTGA+TGG | - | chr8_3:951700-951719 | Msa1268070:CDS | 40.0% | |
| ATGACCATCACATTCATCAG+TGG | + | chr8_3:951707-951726 | None:intergenic | 40.0% | |
| TGTTCTGCATCAACATGAGA+AGG | + | chr8_3:951757-951776 | None:intergenic | 40.0% | |
| ACTGTCACATCTCGATCAAA+TGG | - | chr8_3:951869-951888 | Msa1268070:CDS | 40.0% | |
| TCTCTAATAATGGCGTGTTC+TGG | + | chr8_3:952050-952069 | None:intergenic | 40.0% | |
| TGCGTAGTCCATGAGTTTAT+AGG | + | chr8_3:952358-952377 | None:intergenic | 40.0% | |
| TTCATCCATGACCTGAAACC+GGG | - | chr8_3:950896-950915 | Msa1268070:CDS | 45.0% | |
| TCTATGTTTACCGGGAAACC+CGG | + | chr8_3:950917-950936 | None:intergenic | 45.0% | |
| ATTCATGGAGATTCGATGCG+TGG | + | chr8_3:950973-950992 | None:intergenic | 45.0% | |
| ACGAAGGAACGTTAGACAAC+TGG | - | chr8_3:951044-951063 | Msa1268070:intron | 45.0% | |
| CGAAGGAACGTTAGACAACT+GGG | - | chr8_3:951045-951064 | Msa1268070:intron | 45.0% | |
| !! | GGGGTGGTTCTGAATTGAAA+GGG | + | chr8_3:951111-951130 | None:intergenic | 45.0% |
| !! | AGGGGTGGTTCTGAATTGAA+AGG | + | chr8_3:951112-951131 | None:intergenic | 45.0% |
| !! | TGGTTACGTACGTAGTGGAT+TGG | + | chr8_3:951172-951191 | None:intergenic | 45.0% |
| ATCCACTACGTACGTAACCA+CGG | - | chr8_3:951172-951191 | Msa1268070:intron | 45.0% | |
| ! | AATCCTCCCAACGAGCTTTT+GGG | + | chr8_3:951204-951223 | None:intergenic | 45.0% |
| GATTGGACCGTTGAAGTAAC+CGG | - | chr8_3:951220-951239 | Msa1268070:intron | 45.0% | |
| !! | CAAGTGTAACGGGTAATTCC+CGG | + | chr8_3:951303-951322 | None:intergenic | 45.0% |
| CCAGCACAAACAAGTGTAAC+GGG | + | chr8_3:951313-951332 | None:intergenic | 45.0% | |
| !! | CAAAGCGTTGGTTTCAACTG+GGG | - | chr8_3:951364-951383 | Msa1268070:intron | 45.0% |
| ACCACGTGCTTAAACGATGT+GGG | - | chr8_3:951431-951450 | Msa1268070:intron | 45.0% | |
| TCCGGTGAGGGTTATTATAC+CGG | - | chr8_3:951633-951652 | Msa1268070:CDS | 45.0% | |
| ATCCTTCCACCGATAAAACC+CGG | + | chr8_3:951655-951674 | None:intergenic | 45.0% | |
| GGATGGTGAAATGGCTTAAG+AGG | - | chr8_3:951671-951690 | Msa1268070:CDS | 45.0% | |
| GCAGAACAAGCCAATGAAGA+AGG | - | chr8_3:951769-951788 | Msa1268070:CDS | 45.0% | |
| CAGAGAGCTTATACGCTGAA+AGG | - | chr8_3:952376-952395 | Msa1268070:CDS | 45.0% | |
| TTCATCCATGACCTGAAACC+GGG | - | chr8_3:950896-950915 | Msa1268070:CDS | 45.0% | |
| TCTATGTTTACCGGGAAACC+CGG | + | chr8_3:950917-950936 | None:intergenic | 45.0% | |
| ATTCATGGAGATTCGATGCG+TGG | + | chr8_3:950973-950992 | None:intergenic | 45.0% | |
| ACGAAGGAACGTTAGACAAC+TGG | - | chr8_3:951044-951063 | Msa1268070:intron | 45.0% | |
| CGAAGGAACGTTAGACAACT+GGG | - | chr8_3:951045-951064 | Msa1268070:intron | 45.0% | |
| !! | GGGGTGGTTCTGAATTGAAA+GGG | + | chr8_3:951111-951130 | None:intergenic | 45.0% |
| !! | AGGGGTGGTTCTGAATTGAA+AGG | + | chr8_3:951112-951131 | None:intergenic | 45.0% |
| !! | TGGTTACGTACGTAGTGGAT+TGG | + | chr8_3:951172-951191 | None:intergenic | 45.0% |
| ATCCACTACGTACGTAACCA+CGG | - | chr8_3:951172-951191 | Msa1268070:intron | 45.0% | |
| ! | AATCCTCCCAACGAGCTTTT+GGG | + | chr8_3:951204-951223 | None:intergenic | 45.0% |
| GATTGGACCGTTGAAGTAAC+CGG | - | chr8_3:951220-951239 | Msa1268070:intron | 45.0% | |
| !! | CAAGTGTAACGGGTAATTCC+CGG | + | chr8_3:951303-951322 | None:intergenic | 45.0% |
| CCAGCACAAACAAGTGTAAC+GGG | + | chr8_3:951313-951332 | None:intergenic | 45.0% | |
| !! | CAAAGCGTTGGTTTCAACTG+GGG | - | chr8_3:951364-951383 | Msa1268070:intron | 45.0% |
| ACCACGTGCTTAAACGATGT+GGG | - | chr8_3:951431-951450 | Msa1268070:intron | 45.0% | |
| TCCGGTGAGGGTTATTATAC+CGG | - | chr8_3:951633-951652 | Msa1268070:CDS | 45.0% | |
| ATCCTTCCACCGATAAAACC+CGG | + | chr8_3:951655-951674 | None:intergenic | 45.0% | |
| GGATGGTGAAATGGCTTAAG+AGG | - | chr8_3:951671-951690 | Msa1268070:CDS | 45.0% | |
| GCAGAACAAGCCAATGAAGA+AGG | - | chr8_3:951769-951788 | Msa1268070:CDS | 45.0% | |
| CAGAGAGCTTATACGCTGAA+AGG | - | chr8_3:952376-952395 | Msa1268070:CDS | 45.0% | |
| ! | GAACGACGCCGTTTAGGTTA+CGG | + | chr8_3:950853-950872 | None:intergenic | 50.0% |
| AAGTGTGAACGACGCCGTTT+AGG | + | chr8_3:950859-950878 | None:intergenic | 50.0% | |
| CGACGGTTCAACTTCCAAGT+TGG | + | chr8_3:951008-951027 | None:intergenic | 50.0% | |
| !! | AAGGGTGTTTCCCTGTGAGA+CGG | + | chr8_3:951093-951112 | None:intergenic | 50.0% |
| GAACTGGAGTGATGAAACCG+TGG | + | chr8_3:951150-951169 | None:intergenic | 50.0% | |
| !! | CGTACGTAGTGGATTGGAAC+TGG | + | chr8_3:951166-951185 | None:intergenic | 50.0% |
| TGCTGTCCCAAAAGCTCGTT+GGG | - | chr8_3:951195-951214 | Msa1268070:intron | 50.0% | |
| ! | CAATCCTCCCAACGAGCTTT+TGG | + | chr8_3:951205-951224 | None:intergenic | 50.0% |
| CAAAAGCTCGTTGGGAGGAT+TGG | - | chr8_3:951203-951222 | Msa1268070:intron | 50.0% | |
| TTGGAAACTCACGAACGAGC+CGG | + | chr8_3:951279-951298 | None:intergenic | 50.0% | |
| TCGTTCGTGAGTTTCCAAGC+CGG | - | chr8_3:951281-951300 | Msa1268070:intron | 50.0% | |
| CCCGTTACACTTGTTTGTGC+TGG | - | chr8_3:951310-951329 | Msa1268070:intron | 50.0% | |
| CACCACGTGCTTAAACGATG+TGG | - | chr8_3:951430-951449 | Msa1268070:intron | 50.0% | |
| TCCCACATCGTTTAAGCACG+TGG | + | chr8_3:951435-951454 | None:intergenic | 50.0% | |
| ! | TACGGTGCTGAGGATTTACC+TGG | - | chr8_3:951493-951512 | Msa1268070:CDS | 50.0% |
| !! | AGGATTTACCTGGTGGTGGT+GGG | - | chr8_3:951503-951522 | Msa1268070:CDS | 50.0% |
| TGCTTACATGCAGAACGGTG+AGG | - | chr8_3:951588-951607 | Msa1268070:CDS | 50.0% | |
| CCCGGTATAATAACCCTCAC+CGG | + | chr8_3:951637-951656 | None:intergenic | 50.0% | |
| CCGGTGAGGGTTATTATACC+GGG | - | chr8_3:951634-951653 | Msa1268070:CDS | 50.0% | |
| !! | TACCGGGTTTTATCGGTGGA+AGG | - | chr8_3:951650-951669 | Msa1268070:CDS | 50.0% |
| !! | GGGTTTTATCGGTGGAAGGA+TGG | - | chr8_3:951654-951673 | Msa1268070:CDS | 50.0% |
| TCGGTGGAAGGATGGTGAAA+TGG | - | chr8_3:951662-951681 | Msa1268070:CDS | 50.0% | |
| ACATCGGACACGACATGTGT+CGG | - | chr8_3:952020-952039 | Msa1268070:CDS | 50.0% | |
| GTGACATGGCGTCGTAATCA+CGG | + | chr8_3:952323-952342 | None:intergenic | 50.0% | |
| GGCAAGATCTCATCGTGACA+TGG | + | chr8_3:952337-952356 | None:intergenic | 50.0% | |
| ! | GAACGACGCCGTTTAGGTTA+CGG | + | chr8_3:950853-950872 | None:intergenic | 50.0% |
| AAGTGTGAACGACGCCGTTT+AGG | + | chr8_3:950859-950878 | None:intergenic | 50.0% | |
| CGACGGTTCAACTTCCAAGT+TGG | + | chr8_3:951008-951027 | None:intergenic | 50.0% | |
| !! | AAGGGTGTTTCCCTGTGAGA+CGG | + | chr8_3:951093-951112 | None:intergenic | 50.0% |
| GAACTGGAGTGATGAAACCG+TGG | + | chr8_3:951150-951169 | None:intergenic | 50.0% | |
| !! | CGTACGTAGTGGATTGGAAC+TGG | + | chr8_3:951166-951185 | None:intergenic | 50.0% |
| TGCTGTCCCAAAAGCTCGTT+GGG | - | chr8_3:951195-951214 | Msa1268070:intron | 50.0% | |
| ! | CAATCCTCCCAACGAGCTTT+TGG | + | chr8_3:951205-951224 | None:intergenic | 50.0% |
| CAAAAGCTCGTTGGGAGGAT+TGG | - | chr8_3:951203-951222 | Msa1268070:intron | 50.0% | |
| TTGGAAACTCACGAACGAGC+CGG | + | chr8_3:951279-951298 | None:intergenic | 50.0% | |
| TCGTTCGTGAGTTTCCAAGC+CGG | - | chr8_3:951281-951300 | Msa1268070:intron | 50.0% | |
| CCCGTTACACTTGTTTGTGC+TGG | - | chr8_3:951310-951329 | Msa1268070:intron | 50.0% | |
| CACCACGTGCTTAAACGATG+TGG | - | chr8_3:951430-951449 | Msa1268070:intron | 50.0% | |
| TCCCACATCGTTTAAGCACG+TGG | + | chr8_3:951435-951454 | None:intergenic | 50.0% | |
| ! | TACGGTGCTGAGGATTTACC+TGG | - | chr8_3:951493-951512 | Msa1268070:CDS | 50.0% |
| !! | AGGATTTACCTGGTGGTGGT+GGG | - | chr8_3:951503-951522 | Msa1268070:CDS | 50.0% |
| TGCTTACATGCAGAACGGTG+AGG | - | chr8_3:951588-951607 | Msa1268070:CDS | 50.0% | |
| CCCGGTATAATAACCCTCAC+CGG | + | chr8_3:951637-951656 | None:intergenic | 50.0% | |
| CCGGTGAGGGTTATTATACC+GGG | - | chr8_3:951634-951653 | Msa1268070:CDS | 50.0% | |
| !! | TACCGGGTTTTATCGGTGGA+AGG | - | chr8_3:951650-951669 | Msa1268070:CDS | 50.0% |
| !! | GGGTTTTATCGGTGGAAGGA+TGG | - | chr8_3:951654-951673 | Msa1268070:CDS | 50.0% |
| TCGGTGGAAGGATGGTGAAA+TGG | - | chr8_3:951662-951681 | Msa1268070:CDS | 50.0% | |
| ACATCGGACACGACATGTGT+CGG | - | chr8_3:952020-952039 | Msa1268070:CDS | 50.0% | |
| GTGACATGGCGTCGTAATCA+CGG | + | chr8_3:952323-952342 | None:intergenic | 50.0% | |
| GGCAAGATCTCATCGTGACA+TGG | + | chr8_3:952337-952356 | None:intergenic | 50.0% | |
| ! | GGAAACCCGGTTTCAGGTCA+TGG | + | chr8_3:950904-950923 | None:intergenic | 55.0% |
| TGACCTGAAACCGGGTTTCC+CGG | - | chr8_3:950904-950923 | Msa1268070:CDS | 55.0% | |
| TTACCGGGAAACCCGGTTTC+AGG | + | chr8_3:950910-950929 | None:intergenic | 55.0% | |
| TCTTCGTCGTCGCTGCTGAA+GGG | + | chr8_3:950941-950960 | None:intergenic | 55.0% | |
| ATCTTCGTCGTCGCTGCTGA+AGG | + | chr8_3:950942-950961 | None:intergenic | 55.0% | |
| CTAACGTTCCTTCGTCGCGT+GGG | + | chr8_3:951039-951058 | None:intergenic | 55.0% | |
| TCTAACGTTCCTTCGTCGCG+TGG | + | chr8_3:951040-951059 | None:intergenic | 55.0% | |
| GGTCACACGAAACGCTTCCA+TGG | - | chr8_3:951066-951085 | Msa1268070:intron | 55.0% | |
| CTTCCATGGTCCGTCTCACA+GGG | - | chr8_3:951080-951099 | Msa1268070:intron | 55.0% | |
| TTTCCCTGTGAGACGGACCA+TGG | + | chr8_3:951086-951105 | None:intergenic | 55.0% | |
| AACCGTGGTGCATGAGACGT+GGG | + | chr8_3:951135-951154 | None:intergenic | 55.0% | |
| AAACCGTGGTGCATGAGACG+TGG | + | chr8_3:951136-951155 | None:intergenic | 55.0% | |
| CACCGTGGTTACGTACGTAG+TGG | + | chr8_3:951177-951196 | None:intergenic | 55.0% | |
| GTGCTGTCCCAAAAGCTCGT+TGG | - | chr8_3:951194-951213 | Msa1268070:intron | 55.0% | |
| TGTCCCAAAAGCTCGTTGGG+AGG | - | chr8_3:951198-951217 | Msa1268070:intron | 55.0% | |
| AAACCCAACCCGGTTCACCA+TGG | - | chr8_3:951252-951271 | Msa1268070:intron | 55.0% | |
| CGTTCGTGAGTTTCCAAGCC+GGG | - | chr8_3:951282-951301 | Msa1268070:intron | 55.0% | |
| !! | GTAACGGGTAATTCCCGGCT+TGG | + | chr8_3:951298-951317 | None:intergenic | 55.0% |
| !! | TTTCAACTGGGGTGCTGCTG+CGG | - | chr8_3:951375-951394 | Msa1268070:intron | 55.0% |
| ! | GGTGCTGAGGATTTACCTGG+TGG | - | chr8_3:951496-951515 | Msa1268070:CDS | 55.0% |
| GCTGAGGATTTACCTGGTGG+TGG | - | chr8_3:951499-951518 | Msa1268070:CDS | 55.0% | |
| !! | GAGGATTTACCTGGTGGTGG+TGG | - | chr8_3:951502-951521 | Msa1268070:CDS | 55.0% |
| TATTTCGACCCACCACCACC+AGG | + | chr8_3:951514-951533 | None:intergenic | 55.0% | |
| !! | GGTGGTGGTGGGTCGAAATA+TGG | - | chr8_3:951514-951533 | Msa1268070:CDS | 55.0% |
| CATGCAGAACGGTGAGGCTT+TGG | - | chr8_3:951594-951613 | Msa1268070:CDS | 55.0% | |
| ! | AGGCTTTGGCTCCGGATCAT+GGG | - | chr8_3:951608-951627 | Msa1268070:CDS | 55.0% |
| CTCACCGGAAACCCATGATC+CGG | + | chr8_3:951622-951641 | None:intergenic | 55.0% | |
| GGATCATGGGTTTCCGGTGA+GGG | - | chr8_3:951621-951640 | Msa1268070:CDS | 55.0% | |
| ! | CTTTTGTGTGTGTCCCGCAC+AGG | - | chr8_3:952250-952269 | Msa1268070:CDS | 55.0% |
| CTTGTACCACCAACCTGTGC+GGG | + | chr8_3:952266-952285 | None:intergenic | 55.0% | |
| GCTTGTACCACCAACCTGTG+CGG | + | chr8_3:952267-952286 | None:intergenic | 55.0% | |
| ! | GGAAACCCGGTTTCAGGTCA+TGG | + | chr8_3:950904-950923 | None:intergenic | 55.0% |
| TGACCTGAAACCGGGTTTCC+CGG | - | chr8_3:950904-950923 | Msa1268070:CDS | 55.0% | |
| TTACCGGGAAACCCGGTTTC+AGG | + | chr8_3:950910-950929 | None:intergenic | 55.0% | |
| TCTTCGTCGTCGCTGCTGAA+GGG | + | chr8_3:950941-950960 | None:intergenic | 55.0% | |
| ATCTTCGTCGTCGCTGCTGA+AGG | + | chr8_3:950942-950961 | None:intergenic | 55.0% | |
| CTAACGTTCCTTCGTCGCGT+GGG | + | chr8_3:951039-951058 | None:intergenic | 55.0% | |
| TCTAACGTTCCTTCGTCGCG+TGG | + | chr8_3:951040-951059 | None:intergenic | 55.0% | |
| GGTCACACGAAACGCTTCCA+TGG | - | chr8_3:951066-951085 | Msa1268070:intron | 55.0% | |
| CTTCCATGGTCCGTCTCACA+GGG | - | chr8_3:951080-951099 | Msa1268070:intron | 55.0% | |
| TTTCCCTGTGAGACGGACCA+TGG | + | chr8_3:951086-951105 | None:intergenic | 55.0% | |
| AACCGTGGTGCATGAGACGT+GGG | + | chr8_3:951135-951154 | None:intergenic | 55.0% | |
| AAACCGTGGTGCATGAGACG+TGG | + | chr8_3:951136-951155 | None:intergenic | 55.0% | |
| CACCGTGGTTACGTACGTAG+TGG | + | chr8_3:951177-951196 | None:intergenic | 55.0% | |
| GTGCTGTCCCAAAAGCTCGT+TGG | - | chr8_3:951194-951213 | Msa1268070:intron | 55.0% | |
| TGTCCCAAAAGCTCGTTGGG+AGG | - | chr8_3:951198-951217 | Msa1268070:intron | 55.0% | |
| AAACCCAACCCGGTTCACCA+TGG | - | chr8_3:951252-951271 | Msa1268070:intron | 55.0% | |
| CGTTCGTGAGTTTCCAAGCC+GGG | - | chr8_3:951282-951301 | Msa1268070:intron | 55.0% | |
| !! | GTAACGGGTAATTCCCGGCT+TGG | + | chr8_3:951298-951317 | None:intergenic | 55.0% |
| !! | TTTCAACTGGGGTGCTGCTG+CGG | - | chr8_3:951375-951394 | Msa1268070:intron | 55.0% |
| ! | GGTGCTGAGGATTTACCTGG+TGG | - | chr8_3:951496-951515 | Msa1268070:CDS | 55.0% |
| GCTGAGGATTTACCTGGTGG+TGG | - | chr8_3:951499-951518 | Msa1268070:CDS | 55.0% | |
| !! | GAGGATTTACCTGGTGGTGG+TGG | - | chr8_3:951502-951521 | Msa1268070:CDS | 55.0% |
| TATTTCGACCCACCACCACC+AGG | + | chr8_3:951514-951533 | None:intergenic | 55.0% | |
| !! | GGTGGTGGTGGGTCGAAATA+TGG | - | chr8_3:951514-951533 | Msa1268070:CDS | 55.0% |
| CATGCAGAACGGTGAGGCTT+TGG | - | chr8_3:951594-951613 | Msa1268070:CDS | 55.0% | |
| ! | AGGCTTTGGCTCCGGATCAT+GGG | - | chr8_3:951608-951627 | Msa1268070:CDS | 55.0% |
| CTCACCGGAAACCCATGATC+CGG | + | chr8_3:951622-951641 | None:intergenic | 55.0% | |
| GGATCATGGGTTTCCGGTGA+GGG | - | chr8_3:951621-951640 | Msa1268070:CDS | 55.0% | |
| ! | CTTTTGTGTGTGTCCCGCAC+AGG | - | chr8_3:952250-952269 | Msa1268070:CDS | 55.0% |
| CTTGTACCACCAACCTGTGC+GGG | + | chr8_3:952266-952285 | None:intergenic | 55.0% | |
| GCTTGTACCACCAACCTGTG+CGG | + | chr8_3:952267-952286 | None:intergenic | 55.0% | |
| TCGCGTGGGTCGAGAATCGA+CGG | + | chr8_3:951025-951044 | None:intergenic | 60.0% | |
| ATTCTCGACCCACGCGACGA+AGG | - | chr8_3:951028-951047 | Msa1268070:intron | 60.0% | |
| GCTTCCATGGTCCGTCTCAC+AGG | - | chr8_3:951079-951098 | Msa1268070:intron | 60.0% | |
| TGGTGCATGAGACGTGGGAG+GGG | + | chr8_3:951130-951149 | None:intergenic | 60.0% | |
| GTGGTGCATGAGACGTGGGA+GGG | + | chr8_3:951131-951150 | None:intergenic | 60.0% | |
| CTCCCACGTCTCATGCACCA+CGG | - | chr8_3:951130-951149 | Msa1268070:intron | 60.0% | |
| !!! | GAGCTTTTGGGACAGCACCG+TGG | + | chr8_3:951192-951211 | None:intergenic | 60.0% |
| GGTCCATGGTGAACCGGGTT+GGG | + | chr8_3:951258-951277 | None:intergenic | 60.0% | |
| CAACCCGGTTCACCATGGAC+CGG | - | chr8_3:951257-951276 | Msa1268070:intron | 60.0% | |
| CTGCGGTTTCGAACTCCGTG+TGG | - | chr8_3:951392-951411 | Msa1268070:intron | 60.0% | |
| GTTTCGAACTCCGTGTGGCG+CGG | - | chr8_3:951397-951416 | Msa1268070:intron | 60.0% | |
| ! | GAACGGTGAGGCTTTGGCTC+CGG | - | chr8_3:951600-951619 | Msa1268070:CDS | 60.0% |
| ! | GAGGCTTTGGCTCCGGATCA+TGG | - | chr8_3:951607-951626 | Msa1268070:CDS | 60.0% |
| GGCTCCGGATCATGGGTTTC+CGG | - | chr8_3:951615-951634 | Msa1268070:CDS | 60.0% | |
| CGGATCATGGGTTTCCGGTG+AGG | - | chr8_3:951620-951639 | Msa1268070:CDS | 60.0% | |
| TGTGTGTGTCCCGCACAGGT+TGG | - | chr8_3:952254-952273 | Msa1268070:CDS | 60.0% | |
| TCGCGTGGGTCGAGAATCGA+CGG | + | chr8_3:951025-951044 | None:intergenic | 60.0% | |
| ATTCTCGACCCACGCGACGA+AGG | - | chr8_3:951028-951047 | Msa1268070:intron | 60.0% | |
| GCTTCCATGGTCCGTCTCAC+AGG | - | chr8_3:951079-951098 | Msa1268070:intron | 60.0% | |
| TGGTGCATGAGACGTGGGAG+GGG | + | chr8_3:951130-951149 | None:intergenic | 60.0% | |
| GTGGTGCATGAGACGTGGGA+GGG | + | chr8_3:951131-951150 | None:intergenic | 60.0% | |
| CTCCCACGTCTCATGCACCA+CGG | - | chr8_3:951130-951149 | Msa1268070:intron | 60.0% | |
| !!! | GAGCTTTTGGGACAGCACCG+TGG | + | chr8_3:951192-951211 | None:intergenic | 60.0% |
| GGTCCATGGTGAACCGGGTT+GGG | + | chr8_3:951258-951277 | None:intergenic | 60.0% | |
| CAACCCGGTTCACCATGGAC+CGG | - | chr8_3:951257-951276 | Msa1268070:intron | 60.0% | |
| CTGCGGTTTCGAACTCCGTG+TGG | - | chr8_3:951392-951411 | Msa1268070:intron | 60.0% | |
| GTTTCGAACTCCGTGTGGCG+CGG | - | chr8_3:951397-951416 | Msa1268070:intron | 60.0% | |
| ! | GAACGGTGAGGCTTTGGCTC+CGG | - | chr8_3:951600-951619 | Msa1268070:CDS | 60.0% |
| ! | GAGGCTTTGGCTCCGGATCA+TGG | - | chr8_3:951607-951626 | Msa1268070:CDS | 60.0% |
| GGCTCCGGATCATGGGTTTC+CGG | - | chr8_3:951615-951634 | Msa1268070:CDS | 60.0% | |
| CGGATCATGGGTTTCCGGTG+AGG | - | chr8_3:951620-951639 | Msa1268070:CDS | 60.0% | |
| TGTGTGTGTCCCGCACAGGT+TGG | - | chr8_3:952254-952273 | Msa1268070:CDS | 60.0% | |
| TGCATGAGACGTGGGAGGGG+TGG | + | chr8_3:951127-951146 | None:intergenic | 65.0% | |
| CGTGGTGCATGAGACGTGGG+AGG | + | chr8_3:951132-951151 | None:intergenic | 65.0% | |
| CGGTCCATGGTGAACCGGGT+TGG | + | chr8_3:951259-951278 | None:intergenic | 65.0% | |
| GAGCCGGTCCATGGTGAACC+GGG | + | chr8_3:951263-951282 | None:intergenic | 65.0% | |
| CGAGCCGGTCCATGGTGAAC+CGG | + | chr8_3:951264-951283 | None:intergenic | 65.0% | |
| CTCACGAACGAGCCGGTCCA+TGG | + | chr8_3:951272-951291 | None:intergenic | 65.0% | |
| ! | GTGTGTCCCGCACAGGTTGG+TGG | - | chr8_3:952257-952276 | Msa1268070:CDS | 65.0% |
| TGCATGAGACGTGGGAGGGG+TGG | + | chr8_3:951127-951146 | None:intergenic | 65.0% | |
| CGTGGTGCATGAGACGTGGG+AGG | + | chr8_3:951132-951151 | None:intergenic | 65.0% | |
| CGGTCCATGGTGAACCGGGT+TGG | + | chr8_3:951259-951278 | None:intergenic | 65.0% | |
| GAGCCGGTCCATGGTGAACC+GGG | + | chr8_3:951263-951282 | None:intergenic | 65.0% | |
| CGAGCCGGTCCATGGTGAAC+CGG | + | chr8_3:951264-951283 | None:intergenic | 65.0% | |
| CTCACGAACGAGCCGGTCCA+TGG | + | chr8_3:951272-951291 | None:intergenic | 65.0% | |
| ! | GTGTGTCCCGCACAGGTTGG+TGG | - | chr8_3:952257-952276 | Msa1268070:CDS | 65.0% |
| CAGCGACACGCCGCGCCACA+CGG | + | chr8_3:951410-951429 | None:intergenic | 75.0% | |
| CAGCGACACGCCGCGCCACA+CGG | + | chr8_3:951410-951429 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 950726 | 952501 | 950726 | ID=Msa1268070;Name=Msa1268070 |
| chr8_3 | mRNA | 950726 | 952501 | 950726 | ID=Msa1268070-mRNA-1;Parent=Msa1268070;Name=Msa1268070-mRNA-1;_AED=0.03;_eAED=0.03;_QI=95|1|0.5|1|0|0|2|0|399 |
| chr8_3 | exon | 950726 | 950955 | 950726 | ID=Msa1268070-mRNA-1:exon:101;Parent=Msa1268070-mRNA-1 |
| chr8_3 | exon | 951437 | 952501 | 951437 | ID=Msa1268070-mRNA-1:exon:100;Parent=Msa1268070-mRNA-1 |
| chr8_3 | five_prime_UTR | 952407 | 952501 | 952407 | ID=Msa1268070-mRNA-1:five_prime_utr;Parent=Msa1268070-mRNA-1 |
| chr8_3 | CDS | 951437 | 952406 | 951437 | ID=Msa1268070-mRNA-1:cds;Parent=Msa1268070-mRNA-1 |
| chr8_3 | CDS | 950726 | 950955 | 950726 | ID=Msa1268070-mRNA-1:cds;Parent=Msa1268070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
