AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268080 MtrunA17_Chr1g0156371 98.242 1081 19 0 1 1081 1 1081 0.0 2176
Msa1268080 MtrunA17_Chr3g0142411 69.937 1111 289 9 1 1081 1 1096 0.0 1452
Msa1268080 MtrunA17_Chr5g0405291 49.412 510 222 7 1 503 1 481 1.26e-125 402
Msa1268080 MtrunA17_Chr5g0405291 34.591 318 168 9 798 1081 455 766 3.26e-35 144
Msa1268080 MtrunA17_Chr4g0053121 36.255 502 265 8 1 500 1 449 3.24e-65 240
Msa1268080 MtrunA17_Chr1g0159951 42.489 233 109 2 67 299 136 343 1.22e-41 165
Msa1268080 MtrunA17_Chr8g0384881 39.216 306 146 7 1 299 1 273 1.56e-40 159
Msa1268080 MtrunA17_Chr3g0130811 40.708 226 111 3 74 299 55 257 6.29e-34 140
Msa1268080 MtrunA17_Chr5g0401911 33.716 261 143 4 1 260 1 232 8.07e-29 124
Msa1268080 MtrunA17_Chr4g0044561 31.507 365 227 8 142 500 86 433 2.40e-28 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268080 AT1G19835.6 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G19835.5 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G19835.3 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G19835.1 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G19835.4 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G19835.2 51.135 1101 396 20 1 1078 1 982 0.0 917
Msa1268080 AT1G47900.2 48.819 1143 424 25 1 1076 1 1049 0.0 889
Msa1268080 AT1G47900.3 48.734 1145 424 26 1 1076 1 1051 0.0 885
Msa1268080 AT1G47900.1 48.734 1145 424 26 1 1076 1 1051 0.0 885
Msa1268080 AT4G36120.2 52.174 506 220 5 3 498 4 497 8.10e-152 478
Msa1268080 AT4G36120.1 52.174 506 220 5 3 498 4 497 8.10e-152 478
Msa1268080 AT2G23360.1 36.276 521 246 14 1 515 1 441 6.57e-66 240
Msa1268080 AT3G05270.3 38.206 301 139 8 1 299 1 256 3.66e-37 149
Msa1268080 AT3G05270.2 38.206 301 139 8 1 299 1 256 3.66e-37 149
Msa1268080 AT3G05270.1 38.206 301 139 8 1 299 1 256 3.66e-37 149
Msa1268080 AT1G77580.4 39.474 228 103 3 71 298 24 216 1.58e-33 139
Msa1268080 AT1G77580.2 39.474 228 103 3 71 298 58 250 1.67e-33 139
Msa1268080 AT1G77580.3 39.474 228 103 3 71 298 58 250 1.67e-33 139
Msa1268080 AT1G77580.1 39.474 228 103 3 71 298 24 216 2.05e-33 138
Msa1268080 AT1G21810.3 36.190 210 92 1 89 298 13 180 2.00e-27 119
Msa1268080 AT1G21810.1 36.190 210 92 1 89 298 13 180 2.00e-27 119
Msa1268080 AT2G24470.1 56.338 71 31 0 162 232 22 92 8.89e-17 77.0
Msa1268080 AT3G19370.3 42.991 107 61 0 196 302 156 262 1.66e-15 82.0
Msa1268080 AT3G19370.1 42.991 107 61 0 196 302 156 262 1.66e-15 82.0
Msa1268080 AT3G19370.2 42.991 107 61 0 196 302 156 262 1.66e-15 82.0

Find 242 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATAGGTAGTTTGGGTTTA+AGG 0.086185 8_3:-1016510 None:intergenic
TCAGTTCATGTTCTTCTTTC+AGG 0.092243 8_3:-1018178 None:intergenic
TCCACCTGATCCTGCAAATT+TGG 0.097144 8_3:-1021059 None:intergenic
TCTTGATCTGTCTCATTTCT+TGG 0.164294 8_3:+1019864 Msa1268080:CDS
ATAAAATATATTACCATTAA+AGG 0.171660 8_3:+1021698 Msa1268080:three_prime_UTR
AAGGATGATCCTGAAGATTT+TGG 0.192360 8_3:+1019604 Msa1268080:CDS
TTCATATGGATGGGAGATTT+TGG 0.201783 8_3:-1018959 None:intergenic
ATTTAATATCCTTGGTTATA+AGG 0.215009 8_3:+1019906 Msa1268080:CDS
GTCTTATTGTTTGAAGTAAA+TGG 0.215951 8_3:-1019244 None:intergenic
ATAAAAGAAATAATAATAAA+TGG 0.216535 8_3:-1016532 None:intergenic
TAATAACCGCACCCCTTTAA+TGG 0.221743 8_3:-1021711 None:intergenic
TGGGAGGATTGTGTAGTTAA+AGG 0.221849 8_3:+1021438 Msa1268080:three_prime_UTR
ACTTAGCAAACTTCAAATTT+TGG 0.228892 8_3:+1018898 Msa1268080:CDS
AATAAATGGGATAGGTAGTT+TGG 0.232707 8_3:-1016518 None:intergenic
AAGACCATAGTCATTGTTAA+AGG 0.235685 8_3:-1021633 None:intergenic
CAAGCAATTGGACAAGATTA+AGG 0.237668 8_3:+1018229 Msa1268080:CDS
CAGAAAACTCCTCCATCTTT+TGG 0.257130 8_3:-1019792 None:intergenic
TTGCTGCATAGCCTGTATTT+TGG 0.257557 8_3:-1019000 None:intergenic
ATTGCGAATTTCAAGCTCTT+TGG 0.257885 8_3:-1018471 None:intergenic
TTGAAGTTTGCTAAGTGTTT+TGG 0.260849 8_3:-1018891 None:intergenic
AATATGACTCTACAGAAATT+TGG 0.262881 8_3:-1017759 None:intergenic
TGATACTCCATGTGATAAAA+AGG 0.263448 8_3:+1019585 Msa1268080:CDS
GAAAGTCTTGGCCGAGATTA+TGG 0.264945 8_3:+1018659 Msa1268080:CDS
TTTGGCTGTATATGCTTTCA+TGG 0.269714 8_3:-1018982 None:intergenic
GTCAATGTTTACAAATATAA+AGG 0.271113 8_3:-1021553 None:intergenic
CTGCTTGCCAAGAAGATATA+TGG 0.272289 8_3:-1020940 None:intergenic
GGCTACACGGTAATGATATT+TGG 0.284416 8_3:+1021367 Msa1268080:three_prime_UTR
AGAATGTGATTGTGATATTA+AGG 0.293253 8_3:-1016462 None:intergenic
TACAAAACATATACCTGTTT+GGG 0.302469 8_3:-1017198 None:intergenic
GCTATCAATCCCACGGGGAC+TGG 0.303633 8_3:-1019395 None:intergenic
CTACAAAACATATACCTGTT+TGG 0.304368 8_3:-1017199 None:intergenic
TGAGAAAGTTGCTGCTGAAT+TGG 0.315843 8_3:+1017152 Msa1268080:CDS
GACTTTGTAGGCTTGTGATT+TGG 0.317402 8_3:-1021209 None:intergenic
CTAGAGGTGGAGAAATTTGC+TGG 0.321649 8_3:+1019187 Msa1268080:CDS
GATAGGTAGTTTGGGTTTAA+GGG 0.328132 8_3:-1016509 None:intergenic
CCACCTGATCCTGCAAATTT+GGG 0.328853 8_3:-1021058 None:intergenic
CTTTCCTTTAACAATGACTA+TGG 0.328961 8_3:+1021629 Msa1268080:three_prime_UTR
TTTAATATCCTTGGTTATAA+GGG 0.333038 8_3:+1019907 Msa1268080:CDS
GGCTCTGTCTAGGTCCTTGC+AGG 0.333327 8_3:+1018316 Msa1268080:CDS
TAAAATATATTACCATTAAA+GGG 0.336309 8_3:+1021699 Msa1268080:three_prime_UTR
ACTGTCAGTGTTTGAATCTA+TGG 0.340845 8_3:+1019447 Msa1268080:CDS
CTATCAATCCCACGGGGACT+GGG 0.341097 8_3:-1019394 None:intergenic
GACAGTCTCTGAAATATTAC+AGG 0.341977 8_3:+1021573 Msa1268080:three_prime_UTR
AGAAAAGAATGCTGACGAAT+TGG 0.344363 8_3:+1019120 Msa1268080:CDS
CAGGAAACCATATATCTTCT+TGG 0.344485 8_3:+1020933 Msa1268080:CDS
GATGAAGAGGCTGACTTTGT+AGG 0.345777 8_3:-1021221 None:intergenic
TAATGAAATTCAGACTAAAA+AGG 0.347824 8_3:+1020777 Msa1268080:CDS
GAAACTGAACCAAAATCTTC+AGG 0.348387 8_3:-1019613 None:intergenic
CCTTCTGCTGATTACTTGTC+TGG 0.348966 8_3:-1018931 None:intergenic
GCATACACTCAGAAGGTTCT+TGG 0.355846 8_3:-1019657 None:intergenic
ACCTCGGAGCCCAAATTTGC+AGG 0.363025 8_3:+1021049 Msa1268080:CDS
GAGATGGACGGAGCTAGTTT+TGG 0.363929 8_3:+1021080 Msa1268080:CDS
GAACATGTTTAATATCCTTC+AGG 0.376801 8_3:-1019495 None:intergenic
CTCGGATATATCATCTTTGC+TGG 0.377440 8_3:-1019305 None:intergenic
ATCATTACCATCTTCAGAAA+TGG 0.383278 8_3:-1019032 None:intergenic
TGAGGACTAGAAGGTTTAAC+AGG 0.386914 8_3:-1018704 None:intergenic
TGGATGGTGTACAGGAGATA+TGG 0.388288 8_3:-1021189 None:intergenic
GATAAATACCAAGGAAGCTT+TGG 0.391489 8_3:+1017891 Msa1268080:CDS
AGCTGAAGTTAAATCACAAT+TGG 0.392320 8_3:+1020248 Msa1268080:CDS
CTTAATCTTGTCCAATTGCT+TGG 0.394678 8_3:-1018228 None:intergenic
GTTCTCCATGGAGGACTTTG+AGG 0.394789 8_3:+1020125 Msa1268080:CDS
GAAAAGAATGCTGACGAATT+GGG 0.401808 8_3:+1019121 Msa1268080:CDS
ATATGCTTTCATGGTTCATA+TGG 0.402247 8_3:-1018973 None:intergenic
ATATTCACGTCTGACGGGTT+TGG 0.402685 8_3:+1017777 Msa1268080:CDS
ACTGTAGCAAACTTGCTTCA+TGG 0.403189 8_3:-1019837 None:intergenic
GATCCCATTGGTTCTGTTTG+AGG 0.404007 8_3:-1020978 None:intergenic
ACAGAAATTTGGACATGGTT+CGG 0.410753 8_3:-1017748 None:intergenic
CACGACTTCGTGTTGTTCCT+TGG 0.413839 8_3:+1019718 Msa1268080:CDS
GAGATCTCATGAAGCAGCTT+TGG 0.414919 8_3:+1020428 Msa1268080:CDS
ATAAATGGGATAGGTAGTTT+GGG 0.415676 8_3:-1016517 None:intergenic
AAAACGTAACAGCGAATTGC+AGG 0.418739 8_3:+1018850 Msa1268080:CDS
TTCATTTGTGCAAGTGCAGC+AGG 0.425188 8_3:-1018626 None:intergenic
CTGATAATGCGGCTCTGTCT+AGG 0.427732 8_3:+1018306 Msa1268080:CDS
GAAACTGACTGCTGAGGATC+AGG 0.428547 8_3:+1018106 Msa1268080:CDS
TAAAAGAAATAATAATAAAT+GGG 0.430471 8_3:-1016531 None:intergenic
TTCTCTTTCACATGATTCTA+CGG 0.433391 8_3:-1018414 None:intergenic
TTTCTGTCTTCATTCGTAGA+TGG 0.433666 8_3:-1020377 None:intergenic
GATGTCAAATTTCCATCATC+AGG 0.434545 8_3:-1020072 None:intergenic
AATCCTGAGGTTCCTGATGA+TGG 0.437920 8_3:+1020060 Msa1268080:CDS
GGAGGAGGTGGTAGTGGTAG+TGG 0.445354 8_3:-1016441 None:intergenic
AGCTGCTAACAAGCAGCATA+TGG 0.446965 8_3:+1018526 Msa1268080:CDS
AAGGAAAAGAATACAACATA+TGG 0.447308 8_3:-1021519 None:intergenic
GAATTCAGATTTAATATCCT+TGG 0.447868 8_3:+1019898 Msa1268080:CDS
TATTAAGGAGGAGGTGGTAG+TGG 0.449031 8_3:-1016447 None:intergenic
TTATTATAATAGTAGTAGAA+AGG 0.449123 8_3:+1016359 Msa1268080:five_prime_UTR
TGCATCTAATCAACCCAAAC+AGG 0.451553 8_3:+1017185 Msa1268080:CDS
GAGAGGGTGCCATGAATGTC+TGG 0.451979 8_3:+1021460 Msa1268080:three_prime_UTR
AAGTGTTTGTAAAATGCAAA+GGG 0.452367 8_3:-1021130 None:intergenic
CGAGAAGTTGTGCCGAGTCT+TGG 0.454331 8_3:+1019059 Msa1268080:CDS
TCAATTTCGTTAAATCATGA+AGG 0.454908 8_3:-1021410 None:intergenic
AGCCAAGCGTCTCCTGCTGC+AGG 0.455284 8_3:+1019361 Msa1268080:CDS
CATACACTCAGAAGGTTCTT+GGG 0.458195 8_3:-1019656 None:intergenic
AGAACATGAACTGAAAATAC+AGG 0.458759 8_3:+1018187 Msa1268080:CDS
TCAATGTTTACAAATATAAA+GGG 0.460293 8_3:-1021552 None:intergenic
GCTTTCATGGTTCATATGGA+TGG 0.462160 8_3:-1018969 None:intergenic
CTTGTATCTAATGTTGTACA+TGG 0.462364 8_3:+1021493 Msa1268080:three_prime_UTR
GCAATCTTATCTATGCAATC+AGG 0.462519 8_3:-1019952 None:intergenic
TATCCTTGGTTATAAGGGTA+TGG 0.463385 8_3:+1019912 Msa1268080:CDS
AGCATATACAGCCAAAATAC+AGG 0.468052 8_3:+1018989 Msa1268080:CDS
AGTGAAGACATATGAAGAAA+AGG 0.470909 8_3:+1017807 Msa1268080:CDS
ATTGTGATTTGAGTGAGATA+TGG 0.475292 8_3:+1017083 Msa1268080:exon
TGAAAAGTTAGCCGAGTGTC+AGG 0.477083 8_3:+1020914 Msa1268080:CDS
AAAGGCAGAAGCAGAAGCTT+TGG 0.478071 8_3:+1018049 Msa1268080:CDS
AAATTCTCCAGGCTGGGAAA+AGG 0.482919 8_3:+1018031 Msa1268080:intron
TTTCCATCATCAGGAACCTC+AGG 0.483685 8_3:-1020063 None:intergenic
TATCAATCCCACGGGGACTG+GGG 0.484881 8_3:-1019393 None:intergenic
AAGCAATTGGACAAGATTAA+GGG 0.485157 8_3:+1018230 Msa1268080:CDS
AACTTCAGCTAGAAGTTGCT+CGG 0.486763 8_3:-1020235 None:intergenic
GAATTTCAGCTACAGAGTCT+TGG 0.486988 8_3:-1019543 None:intergenic
ACTTTGAACAGGAACTTCTC+AGG 0.487308 8_3:+1018276 Msa1268080:CDS
GGGGCTGGTGATCCTGCAGC+AGG 0.488978 8_3:-1019373 None:intergenic
GCTGCTGAATTGGACTCTGC+TGG 0.489054 8_3:+1017162 Msa1268080:CDS
ATGATCTCCATTTCTGAAGA+TGG 0.489920 8_3:+1019025 Msa1268080:CDS
GAGCCCAAATTTGCAGGATC+AGG 0.490198 8_3:+1021055 Msa1268080:CDS
TTTAACGAAATTGAGCTTGT+GGG 0.494026 8_3:+1021419 Msa1268080:three_prime_UTR
ATATCATTACCAGACATTCA+TGG 0.495064 8_3:-1021469 None:intergenic
GGAGAGAAATGAGGACTAGA+AGG 0.495341 8_3:-1018713 None:intergenic
TCATGAAGGGGTTCGCAACC+TGG 0.497052 8_3:-1021396 None:intergenic
TTGTGATTTGGATGGTGTAC+AGG 0.497419 8_3:-1021197 None:intergenic
ATATTCTCGAGGGAGAAATC+AGG 0.498205 8_3:-1018740 None:intergenic
TCAGAAGCTGGCACATCGAC+GGG 0.504799 8_3:-1019565 None:intergenic
TTCTAGTCCTCATTTCTCTC+CGG 0.504915 8_3:+1018715 Msa1268080:CDS
GTAGCTGAAGAGGCTGTCTC+AGG 0.506912 8_3:+1017931 Msa1268080:CDS
TTAGTTCAAGAAAATTCGTC+GGG 0.507234 8_3:+1019991 Msa1268080:CDS
ATATGGATAGAAGATGGCCT+TGG 0.509231 8_3:+1017100 Msa1268080:exon
ATCCTGCAGCAGGAGACGCT+TGG 0.510537 8_3:-1019363 None:intergenic
AAAGTGTTTGTAAAATGCAA+AGG 0.511679 8_3:-1021131 None:intergenic
TAGGATACGGAACTTTGAAC+AGG 0.511809 8_3:+1018265 Msa1268080:CDS
TTCACGTCTGACGGGTTTGG+AGG 0.513254 8_3:+1017780 Msa1268080:CDS
ATCACTTGAAACACGTGCAC+AGG 0.515281 8_3:+1020335 Msa1268080:CDS
CAGTGAAGATTCATGATATG+AGG 0.516624 8_3:+1021346 Msa1268080:three_prime_UTR
CACAATTGGCTTCTGCTCAA+AGG 0.517000 8_3:+1020262 Msa1268080:CDS
CCCAAATTTGCAGGATCAGG+TGG 0.517045 8_3:+1021058 Msa1268080:CDS
ATTCTTGATTGAAGATCTGC+TGG 0.518048 8_3:-1019424 None:intergenic
CTTTCATGGTTCATATGGAT+GGG 0.519994 8_3:-1018968 None:intergenic
AAGTTTGAGTCATTATCTGA+TGG 0.520066 8_3:-1021161 None:intergenic
TATAAAGGGAAACAATGAAA+AGG 0.521693 8_3:-1021538 None:intergenic
CAGCAAATTTCTCCACCTCT+AGG 0.522984 8_3:-1019186 None:intergenic
CTCATATCATGAATCTTCAC+TGG 0.524069 8_3:-1021345 None:intergenic
ATCAATCCCACGGGGACTGG+GGG 0.524378 8_3:-1019392 None:intergenic
AGAGAAAGAGAAGGCAATTG+TGG 0.526170 8_3:+1020158 Msa1268080:CDS
ATCGAGTTTCGCCATAATCT+CGG 0.528105 8_3:-1018670 None:intergenic
TTGTAGGCTTGTGATTTGGA+TGG 0.529818 8_3:-1021205 None:intergenic
AGGAACCTCAGGATTAGAGC+AGG 0.530360 8_3:-1020052 None:intergenic
AGCTTCTTCCACTCCTACAC+CGG 0.531327 8_3:+1021244 Msa1268080:CDS
AATGATATTTGGACAGCACC+AGG 0.531907 8_3:+1021378 Msa1268080:three_prime_UTR
TTGTGATATTAAGGAGGAGG+TGG 0.533813 8_3:-1016453 None:intergenic
TGCACTTGCACAAATGAAGC+TGG 0.533816 8_3:+1018631 Msa1268080:CDS
GAGTCATATTCACGTCTGAC+GGG 0.534329 8_3:+1017772 Msa1268080:CDS
TCGGGAGAGAGATATCAAAA+TGG 0.535384 8_3:+1020009 Msa1268080:CDS
AGATGGTATAAGCCAAAAGA+TGG 0.536768 8_3:+1019780 Msa1268080:CDS
ATCAGAAGCTGGCACATCGA+CGG 0.537438 8_3:-1019566 None:intergenic
ACTGACTTCAGATACATCAT+TGG 0.542121 8_3:-1019281 None:intergenic
GAAATAATAATAAATGGGAT+AGG 0.542754 8_3:-1016526 None:intergenic
AGTGGAAGAAGCTGATGAAG+AGG 0.542780 8_3:-1021234 None:intergenic
TTTGCAGGATCAGGTGGAGA+TGG 0.543626 8_3:+1021064 Msa1268080:CDS
GTTCATGATATATCTTCTGA+TGG 0.544329 8_3:+1019757 Msa1268080:CDS
AATTAGAGGCTGAGTGTCAA+AGG 0.544913 8_3:+1018570 Msa1268080:CDS
ATTTAACGAAATTGAGCTTG+TGG 0.545126 8_3:+1021418 Msa1268080:three_prime_UTR
CAATTTCGTTAAATCATGAA+GGG 0.545399 8_3:-1021409 None:intergenic
CAATTCCTCAAAGTCCTCCA+TGG 0.546558 8_3:-1020130 None:intergenic
AAAGGTTACGTGGTCTAGTA+CGG 0.546735 8_3:+1018588 Msa1268080:CDS
AAGAAAAGAACATGAGTATG+AGG 0.546898 8_3:+1018495 Msa1268080:CDS
GCATCCTCAAACAGAACCAA+TGG 0.547812 8_3:+1020974 Msa1268080:CDS
GGAATTTCTGTATATTCTCG+AGG 0.548279 8_3:-1018751 None:intergenic
CATGCATTTGAGTTGAGTCT+CGG 0.550144 8_3:-1020298 None:intergenic
TACAGAGCGCTTATTGACAA+TGG 0.550529 8_3:+1018793 Msa1268080:CDS
ATTGAGATTAGAGAAAGAGA+AGG 0.551379 8_3:+1020149 Msa1268080:CDS
ACATGCTAAAGTAGCTGAAG+AGG 0.551814 8_3:+1017921 Msa1268080:CDS
GTTAGTTCAAGAAAATTCGT+CGG 0.552800 8_3:+1019990 Msa1268080:CDS
ATAATAGTAGTAGAAAGGTA+AGG 0.553887 8_3:+1016364 Msa1268080:five_prime_UTR
CCAGACAAGTAATCAGCAGA+AGG 0.556259 8_3:+1018931 Msa1268080:CDS
CTGTCATTGCTTCTCTGCCA+AGG 0.558008 8_3:-1019735 None:intergenic
GTGATCTTGAGGCTAGGATA+CGG 0.560014 8_3:+1018252 Msa1268080:CDS
GGAGACGCTTGGCTTTGCAA+TGG 0.560591 8_3:-1019352 None:intergenic
AAAAGAATCTGCTAAAACCT+CGG 0.562481 8_3:-1021277 None:intergenic
AGCAGCTTTGGCAAAGTGCA+AGG 0.562788 8_3:+1020440 Msa1268080:CDS
AGTGAGATATGGATAGAAGA+TGG 0.564925 8_3:+1017094 Msa1268080:exon
GATATATCTTCTGATGGAGA+TGG 0.568592 8_3:+1019763 Msa1268080:CDS
TTCAGCTACAGAGTCTTGGA+TGG 0.569854 8_3:-1019539 None:intergenic
TGTGCAAGTGCAGCAGGACC+AGG 0.570936 8_3:-1018620 None:intergenic
TGCCGCAAAAGCTCAATGAC+CGG 0.572380 8_3:-1021315 None:intergenic
TCCTGCAAATTTGGGCTCCG+AGG 0.575513 8_3:-1021050 None:intergenic
AAGCTGGAAGTTGAAAGTCT+TGG 0.575557 8_3:+1018647 Msa1268080:CDS
GACTAAGAAGTTAGAACTGA+TGG 0.576324 8_3:+1019156 Msa1268080:CDS
CATCCTCAAACAGAACCAAT+GGG 0.577158 8_3:+1020975 Msa1268080:CDS
TCACATGGAGTATCAGAAGC+TGG 0.577531 8_3:-1019577 None:intergenic
CAAGATTAAGGGTGATCTTG+AGG 0.577662 8_3:+1018241 Msa1268080:CDS
TTGATCATAGGAGAGAGACT+TGG 0.578161 8_3:+1020881 Msa1268080:intron
ATATTACCATTAAAGGGGTG+CGG 0.579062 8_3:+1021705 Msa1268080:three_prime_UTR
ATGGCTAAGGATGCTGATGT+AGG 0.582211 8_3:+1019466 Msa1268080:CDS
AAATCTGTCATTTATGACCA+TGG 0.582897 8_3:-1021669 None:intergenic
GTTTGAAGTAAATGGCAAAG+AGG 0.583585 8_3:-1019236 None:intergenic
TGCTAACAAGCAGCATATGG+AGG 0.587476 8_3:+1018529 Msa1268080:CDS
GAATTTCTGTATATTCTCGA+GGG 0.588350 8_3:-1018750 None:intergenic
TGAAAAGCTATCAATCCCAC+GGG 0.590101 8_3:-1019401 None:intergenic
CACGTCACAAAAGTTCTCCA+TGG 0.591616 8_3:+1020113 Msa1268080:CDS
CAGGTCTGCTGCTGATAATG+CGG 0.592535 8_3:+1018295 Msa1268080:CDS
CAGGATCAGGTGGAGATGGA+CGG 0.595264 8_3:+1021068 Msa1268080:CDS
GTGAAAAGCTATCAATCCCA+CGG 0.595662 8_3:-1019402 None:intergenic
CATGTTAGAGCGCTCCTGCA+AGG 0.598974 8_3:-1018330 None:intergenic
TCACTGTACATAGATCCCAT+TGG 0.599900 8_3:-1020990 None:intergenic
TGATTGTGATATTAAGGAGG+AGG 0.600565 8_3:-1016456 None:intergenic
TCGAGGGAGAAATCAGGCAC+CGG 0.602488 8_3:-1018734 None:intergenic
CAATCCCTGCTCTAATCCTG+AGG 0.602697 8_3:+1020047 Msa1268080:CDS
AACGAAATTGAGCTTGTGGG+AGG 0.602754 8_3:+1021422 Msa1268080:three_prime_UTR
TTAAGGGTGATCTTGAGGCT+AGG 0.602821 8_3:+1018246 Msa1268080:CDS
AGCTAGAAGAACAATTGCAA+AGG 0.604021 8_3:+1020463 Msa1268080:CDS
ATATATGGTTTCCTGACACT+CGG 0.607908 8_3:-1020925 None:intergenic
CGAGACTCAACTCAAATGCA+TGG 0.608379 8_3:+1020299 Msa1268080:CDS
TCAGGCACCGGAGAGAAATG+AGG 0.609792 8_3:-1018722 None:intergenic
AAAATATATTACCATTAAAG+GGG 0.611457 8_3:+1021700 Msa1268080:three_prime_UTR
AGAGTCATATTCACGTCTGA+CGG 0.613924 8_3:+1017771 Msa1268080:CDS
CAGACAAGTAATCAGCAGAA+GGG 0.615118 8_3:+1018932 Msa1268080:CDS
AGTGTTTGAATCTATGGCTA+AGG 0.616003 8_3:+1019453 Msa1268080:CDS
GGATTGTGTAGTTAAAGGAG+AGG 0.616290 8_3:+1021443 Msa1268080:three_prime_UTR
TGACGAATTGGGCAAATCTG+AGG 0.616648 8_3:+1019132 Msa1268080:CDS
GATCAGGCGTCACAGTTAGA+CGG 0.617015 8_3:+1018122 Msa1268080:CDS
AATTTCGTTAAATCATGAAG+GGG 0.620082 8_3:-1021408 None:intergenic
GTTATCTGCATACACTCAGA+AGG 0.621671 8_3:-1019664 None:intergenic
GCTAACAAGCAGCATATGGA+GGG 0.621875 8_3:+1018530 Msa1268080:CDS
GGAGGTGGTAGTGGTAGTGG+TGG 0.621980 8_3:-1016438 None:intergenic
TATTGCTGTCGACCAAGACT+CGG 0.624331 8_3:-1019071 None:intergenic
GATTGTGTAGTTAAAGGAGA+GGG 0.634854 8_3:+1021444 Msa1268080:three_prime_UTR
ATGTGATTGTGATATTAAGG+AGG 0.635332 8_3:-1016459 None:intergenic
GATGGATGACTTCCTAGAGG+TGG 0.638572 8_3:+1019174 Msa1268080:CDS
TTTCCATACCCTTATAACCA+AGG 0.638601 8_3:-1019915 None:intergenic
ATTCATGATATGAGGCTACA+CGG 0.641736 8_3:+1021354 Msa1268080:three_prime_UTR
TGGTATAAGCCAAAAGATGG+AGG 0.642588 8_3:+1019783 Msa1268080:CDS
GGAACCTCAGGATTAGAGCA+GGG 0.651732 8_3:-1020051 None:intergenic
AGAAAAGGTTCAGACACTTG+AGG 0.656387 8_3:+1017822 Msa1268080:CDS
GCTTCACAGAGCATCAACCT+CGG 0.657044 8_3:+1021033 Msa1268080:CDS
TGATGTAGGTAAGATCCTGA+AGG 0.658649 8_3:+1019480 Msa1268080:CDS
AAACACAGAGATAAATACCA+AGG 0.669689 8_3:+1017882 Msa1268080:CDS
TCTTTCGAAACTGACTGCTG+AGG 0.670642 8_3:+1018100 Msa1268080:CDS
ATTATGGCGAAACTCGATTG+CGG 0.684534 8_3:+1018675 Msa1268080:CDS
ACTCTACAGAAATTTGGACA+TGG 0.687126 8_3:-1017753 None:intergenic
ACTGATGGATGACTTCCTAG+AGG 0.703699 8_3:+1019171 Msa1268080:CDS
GCTGAGTGTCAAAGGTTACG+TGG 0.710643 8_3:+1018578 Msa1268080:CDS
AGTGTTTGTAAAATGCAAAG+GGG 0.712425 8_3:-1021129 None:intergenic
GTCACAAAAGTTCTCCATGG+AGG 0.731979 8_3:+1020116 Msa1268080:CDS
GAAAAGCTATCAATCCCACG+GGG 0.825805 8_3:-1019400 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATATATTACCATTAA+AGG + chr8_3:1021698-1021717 Msa1268080:three_prime_UTR 10.0%
!! TAAAATATATTACCATTAAA+GGG + chr8_3:1021699-1021718 Msa1268080:three_prime_UTR 10.0%
!! TTATTATAATAGTAGTAGAA+AGG + chr8_3:1016359-1016378 Msa1268080:five_prime_UTR 15.0%
!! GTACAATTATAGTAATTTAA+GGG + chr8_3:1016769-1016788 Msa1268080:intron 15.0%
!! TTTGGTTATTATAATCAAAT+GGG - chr8_3:1016796-1016815 None:intergenic 15.0%
!! ATTTGGTTATTATAATCAAA+TGG - chr8_3:1016797-1016816 None:intergenic 15.0%
!!! TTTGTTTTGACTTTTATATA+AGG + chr8_3:1017025-1017044 Msa1268080:intron 15.0%
!!! TCTTGCTTTTTTTTTTTATT+CGG + chr8_3:1017642-1017661 Msa1268080:intron 15.0%
!! TAAAAAAATTGCTAAATTAG+AGG + chr8_3:1018556-1018575 Msa1268080:CDS 15.0%
!!! TAAGAAATTCATTATCTTTT+TGG - chr8_3:1018775-1018794 None:intergenic 15.0%
!! TTCTTAGATTTCTATTTAAA+TGG - chr8_3:1020849-1020868 None:intergenic 15.0%
!! TCAATGTTTACAAATATAAA+GGG - chr8_3:1021555-1021574 None:intergenic 15.0%
!! AAAATATATTACCATTAAAG+GGG + chr8_3:1021700-1021719 Msa1268080:three_prime_UTR 15.0%
!! GAAATAATAATAAATGGGAT+AGG - chr8_3:1016529-1016548 None:intergenic 20.0%
!! GGTACAATTATAGTAATTTA+AGG + chr8_3:1016768-1016787 Msa1268080:intron 20.0%
!!! GTGAATTTTTGAAACATAAA+AGG + chr8_3:1016996-1017015 Msa1268080:intron 20.0%
!!! GTTTTTTTTTTTGTTGTAGA+AGG + chr8_3:1017052-1017071 Msa1268080:intron 20.0%
!! ATTTCATATAAGAAAATGAC+TGG + chr8_3:1017335-1017354 Msa1268080:intron 20.0%
!!! AGATTCAAGTATTTTTCATT+TGG + chr8_3:1017363-1017382 Msa1268080:intron 20.0%
!! AAAAAAAAAAGCAAGACAAA+TGG - chr8_3:1017638-1017657 None:intergenic 20.0%
!!! TTTTTTTTTATTCGGCAATA+TGG + chr8_3:1017650-1017669 Msa1268080:intron 20.0%
!! ATTTAATATCCTTGGTTATA+AGG + chr8_3:1019906-1019925 Msa1268080:CDS 20.0%
!! TTTAATATCCTTGGTTATAA+GGG + chr8_3:1019907-1019926 Msa1268080:CDS 20.0%
!! TAATGAAATTCAGACTAAAA+AGG + chr8_3:1020777-1020796 Msa1268080:CDS 20.0%
!!! TGAATTATTTTCTTGATCAT+AGG + chr8_3:1020869-1020888 Msa1268080:intron 20.0%
!! GTCAATGTTTACAAATATAA+AGG - chr8_3:1021556-1021575 None:intergenic 20.0%
! ATAATAGTAGTAGAAAGGTA+AGG + chr8_3:1016364-1016383 Msa1268080:five_prime_UTR 25.0%
!!! GATTTTTGGGAATTAGAATT+AGG - chr8_3:1016410-1016429 None:intergenic 25.0%
! AGAATGTGATTGTGATATTA+AGG - chr8_3:1016465-1016484 None:intergenic 25.0%
!!! ATTTGTTGGTTTTGTGTTTT+TGG + chr8_3:1016646-1016665 Msa1268080:intron 25.0%
! TTTCTCTTGTGTAATGTATA+TGG + chr8_3:1016966-1016985 Msa1268080:intron 25.0%
! TACAAAACATATACCTGTTT+GGG - chr8_3:1017201-1017220 None:intergenic 25.0%
! TGATACGTTGAATTTAATCA+CGG - chr8_3:1017263-1017282 None:intergenic 25.0%
! TTCATAGGGTATATGTTTAT+TGG + chr8_3:1017311-1017330 Msa1268080:intron 25.0%
!! TTCTGCTTAATTTTTATGCA+TGG + chr8_3:1017394-1017413 Msa1268080:intron 25.0%
! CAAAACTTGAAATGTTAACA+AGG - chr8_3:1017420-1017439 None:intergenic 25.0%
!!! AAGTTTTGAAGAACAATTTC+TGG + chr8_3:1017432-1017451 Msa1268080:intron 25.0%
! TAATGTACTAATCATAAACC+CGG - chr8_3:1017520-1017539 None:intergenic 25.0%
! AATATGACTCTACAGAAATT+TGG - chr8_3:1017762-1017781 None:intergenic 25.0%
! ATTTGAACAGAACTTTAACT+CGG - chr8_3:1018015-1018034 None:intergenic 25.0%
!! ACTTAGCAAACTTCAAATTT+TGG + chr8_3:1018898-1018917 Msa1268080:CDS 25.0%
!! GTCTTATTGTTTGAAGTAAA+TGG - chr8_3:1019247-1019266 None:intergenic 25.0%
! GAATTCAGATTTAATATCCT+TGG + chr8_3:1019898-1019917 Msa1268080:CDS 25.0%
!!! TCTTGAACTAACTTATTTTC+AGG - chr8_3:1019982-1020001 None:intergenic 25.0%
! ACTTACACATGATATGATAT+TGG - chr8_3:1020501-1020520 None:intergenic 25.0%
! CTAATAGACAAAGTAACAAA+AGG - chr8_3:1020736-1020755 None:intergenic 25.0%
!!! CTTTTGTTACTTTGTCTATT+AGG + chr8_3:1020734-1020753 Msa1268080:intron 25.0%
! AAGTGTTTGTAAAATGCAAA+GGG - chr8_3:1021133-1021152 None:intergenic 25.0%
!! AAAGTGTTTGTAAAATGCAA+AGG - chr8_3:1021134-1021153 None:intergenic 25.0%
!! TTTTCATCAAAAGGAAAAAC+CGG + chr8_3:1021296-1021315 Msa1268080:CDS 25.0%
! AATTTCGTTAAATCATGAAG+GGG - chr8_3:1021411-1021430 None:intergenic 25.0%
! CAATTTCGTTAAATCATGAA+GGG - chr8_3:1021412-1021431 None:intergenic 25.0%
! TCAATTTCGTTAAATCATGA+AGG - chr8_3:1021413-1021432 None:intergenic 25.0%
! AAGGAAAAGAATACAACATA+TGG - chr8_3:1021522-1021541 None:intergenic 25.0%
! TATAAAGGGAAACAATGAAA+AGG - chr8_3:1021541-1021560 None:intergenic 25.0%
!!! TCTTTTAAAAGTTGTAACCA+TGG + chr8_3:1021652-1021671 Msa1268080:three_prime_UTR 25.0%
ATGTGATTGTGATATTAAGG+AGG - chr8_3:1016462-1016481 None:intergenic 30.0%
ATAAATGGGATAGGTAGTTT+GGG - chr8_3:1016520-1016539 None:intergenic 30.0%
AATAAATGGGATAGGTAGTT+TGG - chr8_3:1016521-1016540 None:intergenic 30.0%
TTGGATGATGATATAAAGAG+AGG + chr8_3:1016665-1016684 Msa1268080:intron 30.0%
TTAGATCTTGAAGATCACAT+TGG + chr8_3:1016703-1016722 Msa1268080:intron 30.0%
AGAAATGATTACATGCACTA+AGG - chr8_3:1016915-1016934 None:intergenic 30.0%
ATTGTGATTTGAGTGAGATA+TGG + chr8_3:1017083-1017102 Msa1268080:exon 30.0%
!!! TCAGATGATTTTTTCTTCCA+AGG - chr8_3:1017120-1017139 None:intergenic 30.0%
CTACAAAACATATACCTGTT+TGG - chr8_3:1017202-1017221 None:intergenic 30.0%
TTGACACTTCTAATAGTGTT+CGG + chr8_3:1017224-1017243 Msa1268080:intron 30.0%
!! AGTTTCTTACTTTTCTGCTA+TGG + chr8_3:1017480-1017499 Msa1268080:intron 30.0%
!!! TATGGCCTTTTTTTTAATCC+CGG + chr8_3:1017498-1017517 Msa1268080:intron 30.0%
TAAACCCGGGATTAAAAAAA+AGG - chr8_3:1017506-1017525 None:intergenic 30.0%
AATGTACTAATCATAAACCC+GGG - chr8_3:1017519-1017538 None:intergenic 30.0%
ATTATGAAGCATACTAGATG+CGG + chr8_3:1017536-1017555 Msa1268080:intron 30.0%
TTTAGATATGTGTTTGTGTG+TGG + chr8_3:1017565-1017584 Msa1268080:intron 30.0%
TTAGATATGTGTTTGTGTGT+GGG + chr8_3:1017566-1017585 Msa1268080:intron 30.0%
! AGACAAATGGAGTATTAGTT+AGG - chr8_3:1017625-1017644 None:intergenic 30.0%
AGTGAAGACATATGAAGAAA+AGG + chr8_3:1017807-1017826 Msa1268080:CDS 30.0%
AAACACAGAGATAAATACCA+AGG + chr8_3:1017882-1017901 Msa1268080:CDS 30.0%
AAAGGAAACACTATACATCA+AGG - chr8_3:1017984-1018003 None:intergenic 30.0%
TTTAACTCGGGAAACAAAAA+AGG - chr8_3:1018002-1018021 None:intergenic 30.0%
TTTGAACAGAACTTTAACTC+GGG - chr8_3:1018014-1018033 None:intergenic 30.0%
AGAACATGAACTGAAAATAC+AGG + chr8_3:1018187-1018206 Msa1268080:CDS 30.0%
AAGCAATTGGACAAGATTAA+GGG + chr8_3:1018230-1018249 Msa1268080:CDS 30.0%
TTCTCTTTCACATGATTCTA+CGG - chr8_3:1018417-1018436 None:intergenic 30.0%
AAGAAAAGAACATGAGTATG+AGG + chr8_3:1018495-1018514 Msa1268080:CDS 30.0%
GAATTTCTGTATATTCTCGA+GGG - chr8_3:1018753-1018772 None:intergenic 30.0%
!!! TTGAAGTTTGCTAAGTGTTT+TGG - chr8_3:1018894-1018913 None:intergenic 30.0%
ATATGCTTTCATGGTTCATA+TGG - chr8_3:1018976-1018995 None:intergenic 30.0%
ATCATTACCATCTTCAGAAA+TGG - chr8_3:1019035-1019054 None:intergenic 30.0%
!! ATTCTTTTCTTTTGGGAGTT+GGG - chr8_3:1019110-1019129 None:intergenic 30.0%
! TTCAAATCACTCTTCTTTTC+AGG - chr8_3:1019331-1019350 None:intergenic 30.0%
GAACATGTTTAATATCCTTC+AGG - chr8_3:1019498-1019517 None:intergenic 30.0%
TGATACTCCATGTGATAAAA+AGG + chr8_3:1019585-1019604 Msa1268080:CDS 30.0%
GTTCATGATATATCTTCTGA+TGG + chr8_3:1019757-1019776 Msa1268080:CDS 30.0%
!! AACTAACTTATTTTCAGGCA+GGG - chr8_3:1019977-1019996 None:intergenic 30.0%
GTTAGTTCAAGAAAATTCGT+CGG + chr8_3:1019990-1020009 Msa1268080:CDS 30.0%
TTAGTTCAAGAAAATTCGTC+GGG + chr8_3:1019991-1020010 Msa1268080:CDS 30.0%
ATTGAGATTAGAGAAAGAGA+AGG + chr8_3:1020149-1020168 Msa1268080:CDS 30.0%
AGCTGAAGTTAAATCACAAT+TGG + chr8_3:1020248-1020267 Msa1268080:CDS 30.0%
CATAGTAAGTTAATGTTAGC+AGG - chr8_3:1020647-1020666 None:intergenic 30.0%
GGAGGAATTAGAAATAGAAT+TGG - chr8_3:1020715-1020734 None:intergenic 30.0%
ATAGACAAAGTAACAAAAGG+AGG - chr8_3:1020733-1020752 None:intergenic 30.0%
GCTTTCTATTTGAATGGAAT+CGG - chr8_3:1020810-1020829 None:intergenic 30.0%
!!! CTAGTTTTGGTTTTATGCAA+AGG + chr8_3:1021093-1021112 Msa1268080:CDS 30.0%
AGTGTTTGTAAAATGCAAAG+GGG - chr8_3:1021132-1021151 None:intergenic 30.0%
AAGTTTGAGTCATTATCTGA+TGG - chr8_3:1021164-1021183 None:intergenic 30.0%
AAAAGAATCTGCTAAAACCT+CGG - chr8_3:1021280-1021299 None:intergenic 30.0%
! AGCAGATTCTTTTCATCAAA+AGG + chr8_3:1021287-1021306 Msa1268080:CDS 30.0%
ATTTAACGAAATTGAGCTTG+TGG + chr8_3:1021418-1021437 Msa1268080:three_prime_UTR 30.0%
TTTAACGAAATTGAGCTTGT+GGG + chr8_3:1021419-1021438 Msa1268080:three_prime_UTR 30.0%
ATATCATTACCAGACATTCA+TGG - chr8_3:1021472-1021491 None:intergenic 30.0%
CTTGTATCTAATGTTGTACA+TGG + chr8_3:1021493-1021512 Msa1268080:three_prime_UTR 30.0%
CTTTCCTTTAACAATGACTA+TGG + chr8_3:1021629-1021648 Msa1268080:three_prime_UTR 30.0%
AAGACCATAGTCATTGTTAA+AGG - chr8_3:1021636-1021655 None:intergenic 30.0%
! AAATCTGTCATTTATGACCA+TGG - chr8_3:1021672-1021691 None:intergenic 30.0%
! GGTGGCTAAGAAAGATTTTT+GGG - chr8_3:1016423-1016442 None:intergenic 35.0%
! TGGTGGCTAAGAAAGATTTT+TGG - chr8_3:1016424-1016443 None:intergenic 35.0%
TGATTGTGATATTAAGGAGG+AGG - chr8_3:1016459-1016478 None:intergenic 35.0%
! GATAGGTAGTTTGGGTTTAA+GGG - chr8_3:1016512-1016531 None:intergenic 35.0%
AAACAGAGAAGGGTAGAATT+TGG - chr8_3:1016814-1016833 None:intergenic 35.0%
GAAATGCAACAAACAGAGAA+GGG - chr8_3:1016824-1016843 None:intergenic 35.0%
TGAAATGCAACAAACAGAGA+AGG - chr8_3:1016825-1016844 None:intergenic 35.0%
AGTGAGATATGGATAGAAGA+TGG + chr8_3:1017094-1017113 Msa1268080:exon 35.0%
!!! ATGGCCTTTTTTTTAATCCC+GGG + chr8_3:1017499-1017518 Msa1268080:intron 35.0%
TTATGAAGCATACTAGATGC+GGG + chr8_3:1017537-1017556 Msa1268080:intron 35.0%
GGGATTTGAACTTGCATAAT+TGG + chr8_3:1017586-1017605 Msa1268080:intron 35.0%
ACAGAAATTTGGACATGGTT+CGG - chr8_3:1017751-1017770 None:intergenic 35.0%
ACTCTACAGAAATTTGGACA+TGG - chr8_3:1017756-1017775 None:intergenic 35.0%
GATAAATACCAAGGAAGCTT+TGG + chr8_3:1017891-1017910 Msa1268080:CDS 35.0%
!! TTGTTTTACCAAAGCTTCCT+TGG - chr8_3:1017902-1017921 None:intergenic 35.0%
AAGTTCTGTTCAAATTCTCC+AGG + chr8_3:1018020-1018039 Msa1268080:intron 35.0%
TCAGTTCATGTTCTTCTTTC+AGG - chr8_3:1018181-1018200 None:intergenic 35.0%
!! CAATTGCTTGGTTTTTGCAA+GGG - chr8_3:1018219-1018238 None:intergenic 35.0%
CTTAATCTTGTCCAATTGCT+TGG - chr8_3:1018231-1018250 None:intergenic 35.0%
CAAGCAATTGGACAAGATTA+AGG + chr8_3:1018229-1018248 Msa1268080:CDS 35.0%
ATTGCGAATTTCAAGCTCTT+TGG - chr8_3:1018474-1018493 None:intergenic 35.0%
GGAATTTCTGTATATTCTCG+AGG - chr8_3:1018754-1018773 None:intergenic 35.0%
!! CTTCAAATTTTGGAAGCACA+AGG + chr8_3:1018908-1018927 Msa1268080:CDS 35.0%
! TTCATATGGATGGGAGATTT+TGG - chr8_3:1018962-1018981 None:intergenic 35.0%
CTTTCATGGTTCATATGGAT+GGG - chr8_3:1018971-1018990 None:intergenic 35.0%
TTTGGCTGTATATGCTTTCA+TGG - chr8_3:1018985-1019004 None:intergenic 35.0%
AGCATATACAGCCAAAATAC+AGG + chr8_3:1018989-1019008 Msa1268080:CDS 35.0%
! ATGATCTCCATTTCTGAAGA+TGG + chr8_3:1019025-1019044 Msa1268080:CDS 35.0%
!! CATTCTTTTCTTTTGGGAGT+TGG - chr8_3:1019111-1019130 None:intergenic 35.0%
! CGTCAGCATTCTTTTCTTTT+GGG - chr8_3:1019117-1019136 None:intergenic 35.0%
! TCGTCAGCATTCTTTTCTTT+TGG - chr8_3:1019118-1019137 None:intergenic 35.0%
AGAAAAGAATGCTGACGAAT+TGG + chr8_3:1019120-1019139 Msa1268080:CDS 35.0%
GAAAAGAATGCTGACGAATT+GGG + chr8_3:1019121-1019140 Msa1268080:CDS 35.0%
GACTAAGAAGTTAGAACTGA+TGG + chr8_3:1019156-1019175 Msa1268080:CDS 35.0%
! GTTTGAAGTAAATGGCAAAG+AGG - chr8_3:1019239-1019258 None:intergenic 35.0%
! ACTGACTTCAGATACATCAT+TGG - chr8_3:1019284-1019303 None:intergenic 35.0%
ATTCTTGATTGAAGATCTGC+TGG - chr8_3:1019427-1019446 None:intergenic 35.0%
ACTGTCAGTGTTTGAATCTA+TGG + chr8_3:1019447-1019466 Msa1268080:CDS 35.0%
AGTGTTTGAATCTATGGCTA+AGG + chr8_3:1019453-1019472 Msa1268080:CDS 35.0%
! GGATCATCCTTTTTATCACA+TGG - chr8_3:1019595-1019614 None:intergenic 35.0%
! AAGGATGATCCTGAAGATTT+TGG + chr8_3:1019604-1019623 Msa1268080:CDS 35.0%
GAAACTGAACCAAAATCTTC+AGG - chr8_3:1019616-1019635 None:intergenic 35.0%
GATATATCTTCTGATGGAGA+TGG + chr8_3:1019763-1019782 Msa1268080:CDS 35.0%
AGATGGTATAAGCCAAAAGA+TGG + chr8_3:1019780-1019799 Msa1268080:CDS 35.0%
TCTTGATCTGTCTCATTTCT+TGG + chr8_3:1019864-1019883 Msa1268080:CDS 35.0%
TATCCTTGGTTATAAGGGTA+TGG + chr8_3:1019912-1019931 Msa1268080:CDS 35.0%
TTTCCATACCCTTATAACCA+AGG - chr8_3:1019918-1019937 None:intergenic 35.0%
GCAATCTTATCTATGCAATC+AGG - chr8_3:1019955-1019974 None:intergenic 35.0%
!! GAACTAACTTATTTTCAGGC+AGG - chr8_3:1019978-1019997 None:intergenic 35.0%
GATGTCAAATTTCCATCATC+AGG - chr8_3:1020075-1020094 None:intergenic 35.0%
TTTCTGTCTTCATTCGTAGA+TGG - chr8_3:1020380-1020399 None:intergenic 35.0%
AGCTAGAAGAACAATTGCAA+AGG + chr8_3:1020463-1020482 Msa1268080:CDS 35.0%
TAAATTCCACTGTTGTGAAC+AGG - chr8_3:1020567-1020586 None:intergenic 35.0%
CACAACAGTGGAATTTATGT+TGG + chr8_3:1020570-1020589 Msa1268080:intron 35.0%
TGGTTTGAGTAAGAAAACGT+AGG + chr8_3:1020590-1020609 Msa1268080:intron 35.0%
TTCTATTTGAATGGAATCGG+TGG - chr8_3:1020807-1020826 None:intergenic 35.0%
TTCCATTCAAATAGAAAGCC+AGG + chr8_3:1020811-1020830 Msa1268080:intron 35.0%
AAATGGAATTAAATCCAGCC+TGG - chr8_3:1020832-1020851 None:intergenic 35.0%
ATATATGGTTTCCTGACACT+CGG - chr8_3:1020928-1020947 None:intergenic 35.0%
CAGGAAACCATATATCTTCT+TGG + chr8_3:1020933-1020952 Msa1268080:CDS 35.0%
!!! TTTTGGTTTTATGCAAAGGC+AGG + chr8_3:1021097-1021116 Msa1268080:CDS 35.0%
!!! TTTGGTTTTATGCAAAGGCA+GGG + chr8_3:1021098-1021117 Msa1268080:CDS 35.0%
CTCATATCATGAATCTTCAC+TGG - chr8_3:1021348-1021367 None:intergenic 35.0%
CAGTGAAGATTCATGATATG+AGG + chr8_3:1021346-1021365 Msa1268080:three_prime_UTR 35.0%
ATTCATGATATGAGGCTACA+CGG + chr8_3:1021354-1021373 Msa1268080:three_prime_UTR 35.0%
GATTGTGTAGTTAAAGGAGA+GGG + chr8_3:1021444-1021463 Msa1268080:three_prime_UTR 35.0%
!! GACAGTCTCTGAAATATTAC+AGG + chr8_3:1021573-1021592 Msa1268080:three_prime_UTR 35.0%
ATATTACCATTAAAGGGGTG+CGG + chr8_3:1021705-1021724 Msa1268080:three_prime_UTR 35.0%
TTGTGATATTAAGGAGGAGG+TGG - chr8_3:1016456-1016475 None:intergenic 40.0%
! GGATAGGTAGTTTGGGTTTA+AGG - chr8_3:1016513-1016532 None:intergenic 40.0%
GTCTCACACTTTGAATGCAT+TGG + chr8_3:1016747-1016766 Msa1268080:intron 40.0%
TGCACTAAGGTGAATAGTGT+CGG - chr8_3:1016902-1016921 None:intergenic 40.0%
ATATGGATAGAAGATGGCCT+TGG + chr8_3:1017100-1017119 Msa1268080:exon 40.0%
TGAGAAAGTTGCTGCTGAAT+TGG + chr8_3:1017152-1017171 Msa1268080:CDS 40.0%
TGCATCTAATCAACCCAAAC+AGG + chr8_3:1017185-1017204 Msa1268080:CDS 40.0%
CAACGTATCAGTGTTATGTC+CGG + chr8_3:1017273-1017292 Msa1268080:intron 40.0%
TGTCTGTGTCAATGCTTCAT+AGG + chr8_3:1017296-1017315 Msa1268080:intron 40.0%
GTCTGTGTCAATGCTTCATA+GGG + chr8_3:1017297-1017316 Msa1268080:intron 40.0%
!! TTGCTTTTGCTTATGCAAGC+AGG + chr8_3:1017711-1017730 Msa1268080:intron 40.0%
AGAGTCATATTCACGTCTGA+CGG + chr8_3:1017771-1017790 Msa1268080:CDS 40.0%
AGAAAAGGTTCAGACACTTG+AGG + chr8_3:1017822-1017841 Msa1268080:CDS 40.0%
ACATGCTAAAGTAGCTGAAG+AGG + chr8_3:1017921-1017940 Msa1268080:CDS 40.0%
!! CCAATTGCTTGGTTTTTGCA+AGG - chr8_3:1018220-1018239 None:intergenic 40.0%
CCTTGCAAAAACCAAGCAAT+TGG + chr8_3:1018217-1018236 Msa1268080:CDS 40.0%
CAAGATTAAGGGTGATCTTG+AGG + chr8_3:1018241-1018260 Msa1268080:CDS 40.0%
TAGGATACGGAACTTTGAAC+AGG + chr8_3:1018265-1018284 Msa1268080:CDS 40.0%
ACTTTGAACAGGAACTTCTC+AGG + chr8_3:1018276-1018295 Msa1268080:CDS 40.0%
TGAAGAAAAAGCTCATGCTG+AGG + chr8_3:1018367-1018386 Msa1268080:CDS 40.0%
AATTAGAGGCTGAGTGTCAA+AGG + chr8_3:1018570-1018589 Msa1268080:CDS 40.0%
AAAGGTTACGTGGTCTAGTA+CGG + chr8_3:1018588-1018607 Msa1268080:CDS 40.0%
CTAGTACGGAAAAAGTTACC+TGG + chr8_3:1018602-1018621 Msa1268080:CDS 40.0%
AAGCTGGAAGTTGAAAGTCT+TGG + chr8_3:1018647-1018666 Msa1268080:CDS 40.0%
ATCGAGTTTCGCCATAATCT+CGG - chr8_3:1018673-1018692 None:intergenic 40.0%
ATTATGGCGAAACTCGATTG+CGG + chr8_3:1018675-1018694 Msa1268080:CDS 40.0%
TGAGGACTAGAAGGTTTAAC+AGG - chr8_3:1018707-1018726 None:intergenic 40.0%
TTCTAGTCCTCATTTCTCTC+CGG + chr8_3:1018715-1018734 Msa1268080:CDS 40.0%
ATATTCTCGAGGGAGAAATC+AGG - chr8_3:1018743-1018762 None:intergenic 40.0%
! TACAGAGCGCTTATTGACAA+TGG + chr8_3:1018793-1018812 Msa1268080:CDS 40.0%
AAAACGTAACAGCGAATTGC+AGG + chr8_3:1018850-1018869 Msa1268080:CDS 40.0%
CAGACAAGTAATCAGCAGAA+GGG + chr8_3:1018932-1018951 Msa1268080:CDS 40.0%
GCTTTCATGGTTCATATGGA+TGG - chr8_3:1018972-1018991 None:intergenic 40.0%
! TTGCTGCATAGCCTGTATTT+TGG - chr8_3:1019003-1019022 None:intergenic 40.0%
CTCGGATATATCATCTTTGC+TGG - chr8_3:1019308-1019327 None:intergenic 40.0%
!! ATCACTCTTCTTTTCAGGCT+CGG - chr8_3:1019326-1019345 None:intergenic 40.0%
TGAAAAGCTATCAATCCCAC+GGG - chr8_3:1019404-1019423 None:intergenic 40.0%
GTGAAAAGCTATCAATCCCA+CGG - chr8_3:1019405-1019424 None:intergenic 40.0%
TGATGTAGGTAAGATCCTGA+AGG + chr8_3:1019480-1019499 Msa1268080:CDS 40.0%
GAATTTCAGCTACAGAGTCT+TGG - chr8_3:1019546-1019565 None:intergenic 40.0%
CATACACTCAGAAGGTTCTT+GGG - chr8_3:1019659-1019678 None:intergenic 40.0%
GTTATCTGCATACACTCAGA+AGG - chr8_3:1019667-1019686 None:intergenic 40.0%
TGGTATAAGCCAAAAGATGG+AGG + chr8_3:1019783-1019802 Msa1268080:CDS 40.0%
! CAGAAAACTCCTCCATCTTT+TGG - chr8_3:1019795-1019814 None:intergenic 40.0%
! ACTGTAGCAAACTTGCTTCA+TGG - chr8_3:1019840-1019859 None:intergenic 40.0%
TCGGGAGAGAGATATCAAAA+TGG + chr8_3:1020009-1020028 Msa1268080:CDS 40.0%
AGAGAAAGAGAAGGCAATTG+TGG + chr8_3:1020158-1020177 Msa1268080:CDS 40.0%
AACTTCAGCTAGAAGTTGCT+CGG - chr8_3:1020238-1020257 None:intergenic 40.0%
!! CATGCATTTGAGTTGAGTCT+CGG - chr8_3:1020301-1020320 None:intergenic 40.0%
! AGCCTGGCTTTCTATTTGAA+TGG - chr8_3:1020816-1020835 None:intergenic 40.0%
ATTCAAATAGAAAGCCAGGC+TGG + chr8_3:1020815-1020834 Msa1268080:intron 40.0%
TTGATCATAGGAGAGAGACT+TGG + chr8_3:1020881-1020900 Msa1268080:intron 40.0%
CTGCTTGCCAAGAAGATATA+TGG - chr8_3:1020943-1020962 None:intergenic 40.0%
CATCCTCAAACAGAACCAAT+GGG + chr8_3:1020975-1020994 Msa1268080:CDS 40.0%
TCACTGTACATAGATCCCAT+TGG - chr8_3:1020993-1021012 None:intergenic 40.0%
! GTACAGTGAGAAGCTTTTGA+AGG + chr8_3:1021004-1021023 Msa1268080:CDS 40.0%
!! GAGAAGCTTTTGAAGGTTGA+AGG + chr8_3:1021011-1021030 Msa1268080:CDS 40.0%
! TTGTGATTTGGATGGTGTAC+AGG - chr8_3:1021200-1021219 None:intergenic 40.0%
! TTGTAGGCTTGTGATTTGGA+TGG - chr8_3:1021208-1021227 None:intergenic 40.0%
GACTTTGTAGGCTTGTGATT+TGG - chr8_3:1021212-1021231 None:intergenic 40.0%
GGCTACACGGTAATGATATT+TGG + chr8_3:1021367-1021386 Msa1268080:three_prime_UTR 40.0%
AATGATATTTGGACAGCACC+AGG + chr8_3:1021378-1021397 Msa1268080:three_prime_UTR 40.0%
TGGGAGGATTGTGTAGTTAA+AGG + chr8_3:1021438-1021457 Msa1268080:three_prime_UTR 40.0%
GGATTGTGTAGTTAAAGGAG+AGG + chr8_3:1021443-1021462 Msa1268080:three_prime_UTR 40.0%
TAATAACCGCACCCCTTTAA+TGG - chr8_3:1021714-1021733 None:intergenic 40.0%
TATTAAGGAGGAGGTGGTAG+TGG - chr8_3:1016450-1016469 None:intergenic 45.0%
! ACTAAGGTGAATAGTGTCGG+CGG - chr8_3:1016899-1016918 None:intergenic 45.0%
!! TGAAGCATTGACACAGACAC+CGG - chr8_3:1017295-1017314 None:intergenic 45.0%
GAGTCATATTCACGTCTGAC+GGG + chr8_3:1017772-1017791 Msa1268080:CDS 45.0%
!! ATATTCACGTCTGACGGGTT+TGG + chr8_3:1017777-1017796 Msa1268080:CDS 45.0%
TCTGTTCAAATTCTCCAGGC+TGG + chr8_3:1018024-1018043 Msa1268080:intron 45.0%
CTGTTCAAATTCTCCAGGCT+GGG + chr8_3:1018025-1018044 Msa1268080:intron 45.0%
AAATTCTCCAGGCTGGGAAA+AGG + chr8_3:1018031-1018050 Msa1268080:intron 45.0%
AAAGGCAGAAGCAGAAGCTT+TGG + chr8_3:1018049-1018068 Msa1268080:CDS 45.0%
TCTTTCGAAACTGACTGCTG+AGG + chr8_3:1018100-1018119 Msa1268080:CDS 45.0%
TTAAGGGTGATCTTGAGGCT+AGG + chr8_3:1018246-1018265 Msa1268080:CDS 45.0%
GTGATCTTGAGGCTAGGATA+CGG + chr8_3:1018252-1018271 Msa1268080:CDS 45.0%
AGCTGCTAACAAGCAGCATA+TGG + chr8_3:1018526-1018545 Msa1268080:CDS 45.0%
TGCTAACAAGCAGCATATGG+AGG + chr8_3:1018529-1018548 Msa1268080:CDS 45.0%
GCTAACAAGCAGCATATGGA+GGG + chr8_3:1018530-1018549 Msa1268080:CDS 45.0%
TTCATTTGTGCAAGTGCAGC+AGG - chr8_3:1018629-1018648 None:intergenic 45.0%
TGCACTTGCACAAATGAAGC+TGG + chr8_3:1018631-1018650 Msa1268080:CDS 45.0%
GAAAGTCTTGGCCGAGATTA+TGG + chr8_3:1018659-1018678 Msa1268080:CDS 45.0%
GGAGAGAAATGAGGACTAGA+AGG - chr8_3:1018716-1018735 None:intergenic 45.0%
! CCTTCTGCTGATTACTTGTC+TGG - chr8_3:1018934-1018953 None:intergenic 45.0%
CCAGACAAGTAATCAGCAGA+AGG + chr8_3:1018931-1018950 Msa1268080:CDS 45.0%
TATTGCTGTCGACCAAGACT+CGG - chr8_3:1019074-1019093 None:intergenic 45.0%
TGACGAATTGGGCAAATCTG+AGG + chr8_3:1019132-1019151 Msa1268080:CDS 45.0%
! ACTGATGGATGACTTCCTAG+AGG + chr8_3:1019171-1019190 Msa1268080:CDS 45.0%
CAGCAAATTTCTCCACCTCT+AGG - chr8_3:1019189-1019208 None:intergenic 45.0%
CTAGAGGTGGAGAAATTTGC+TGG + chr8_3:1019187-1019206 Msa1268080:CDS 45.0%
GAAAAGCTATCAATCCCACG+GGG - chr8_3:1019403-1019422 None:intergenic 45.0%
ATGGCTAAGGATGCTGATGT+AGG + chr8_3:1019466-1019485 Msa1268080:CDS 45.0%
TTCAGCTACAGAGTCTTGGA+TGG - chr8_3:1019542-1019561 None:intergenic 45.0%
! TCACATGGAGTATCAGAAGC+TGG - chr8_3:1019580-1019599 None:intergenic 45.0%
GCATACACTCAGAAGGTTCT+TGG - chr8_3:1019660-1019679 None:intergenic 45.0%
AATCCTGAGGTTCCTGATGA+TGG + chr8_3:1020060-1020079 Msa1268080:CDS 45.0%
TTTCCATCATCAGGAACCTC+AGG - chr8_3:1020066-1020085 None:intergenic 45.0%
CACGTCACAAAAGTTCTCCA+TGG + chr8_3:1020113-1020132 Msa1268080:CDS 45.0%
GTCACAAAAGTTCTCCATGG+AGG + chr8_3:1020116-1020135 Msa1268080:CDS 45.0%
CAATTCCTCAAAGTCCTCCA+TGG - chr8_3:1020133-1020152 None:intergenic 45.0%
! CACAATTGGCTTCTGCTCAA+AGG + chr8_3:1020262-1020281 Msa1268080:CDS 45.0%
CGAGACTCAACTCAAATGCA+TGG + chr8_3:1020299-1020318 Msa1268080:CDS 45.0%
ATCACTTGAAACACGTGCAC+AGG + chr8_3:1020335-1020354 Msa1268080:CDS 45.0%
GAGATCTCATGAAGCAGCTT+TGG + chr8_3:1020428-1020447 Msa1268080:CDS 45.0%
CATAATCCATTCCTACTCGC+AGG + chr8_3:1020541-1020560 Msa1268080:intron 45.0%
TGAAAAGTTAGCCGAGTGTC+AGG + chr8_3:1020914-1020933 Msa1268080:CDS 45.0%
GCATCCTCAAACAGAACCAA+TGG + chr8_3:1020974-1020993 Msa1268080:CDS 45.0%
!! GATCCCATTGGTTCTGTTTG+AGG - chr8_3:1020981-1021000 None:intergenic 45.0%
CCACCTGATCCTGCAAATTT+GGG - chr8_3:1021061-1021080 None:intergenic 45.0%
TCCACCTGATCCTGCAAATT+TGG - chr8_3:1021062-1021081 None:intergenic 45.0%
TGGATGGTGTACAGGAGATA+TGG - chr8_3:1021192-1021211 None:intergenic 45.0%
! GATGAAGAGGCTGACTTTGT+AGG - chr8_3:1021224-1021243 None:intergenic 45.0%
AGTGGAAGAAGCTGATGAAG+AGG - chr8_3:1021237-1021256 None:intergenic 45.0%
! ATGTTTTTCCGGTGTAGGAG+TGG - chr8_3:1021255-1021274 None:intergenic 45.0%
ACTCCTACACCGGAAAAACA+TGG + chr8_3:1021254-1021273 Msa1268080:CDS 45.0%
! AAACCTCGGCCATGTTTTTC+CGG - chr8_3:1021266-1021285 None:intergenic 45.0%
! AACCGGTCATTGAGCTTTTG+CGG + chr8_3:1021313-1021332 Msa1268080:exon 45.0%
! ATTGAGCTTTTGCGGCATAC+AGG + chr8_3:1021321-1021340 Msa1268080:exon 45.0%
AACGAAATTGAGCTTGTGGG+AGG + chr8_3:1021422-1021441 Msa1268080:three_prime_UTR 45.0%
!! TAAAAGAAATAATAATAAAT+GGG - chr8_3:1016534-1016553 None:intergenic 5.0%
!! ATAAAAGAAATAATAATAAA+TGG - chr8_3:1016535-1016554 None:intergenic 5.0%
!! TTATTATTATTATTATTTGT+TGG + chr8_3:1016632-1016651 Msa1268080:intron 5.0%
GAAACTGACTGCTGAGGATC+AGG + chr8_3:1018106-1018125 Msa1268080:CDS 50.0%
GATCAGGCGTCACAGTTAGA+CGG + chr8_3:1018122-1018141 Msa1268080:CDS 50.0%
! CAGGTCTGCTGCTGATAATG+CGG + chr8_3:1018295-1018314 Msa1268080:CDS 50.0%
! CTGATAATGCGGCTCTGTCT+AGG + chr8_3:1018306-1018325 Msa1268080:CDS 50.0%
GCTGAGTGTCAAAGGTTACG+TGG + chr8_3:1018578-1018597 Msa1268080:CDS 50.0%
GATGGATGACTTCCTAGAGG+TGG + chr8_3:1019174-1019193 Msa1268080:CDS 50.0%
ATCAGAAGCTGGCACATCGA+CGG - chr8_3:1019569-1019588 None:intergenic 50.0%
! CACGACTTCGTGTTGTTCCT+TGG + chr8_3:1019718-1019737 Msa1268080:CDS 50.0%
CTGTCATTGCTTCTCTGCCA+AGG - chr8_3:1019738-1019757 None:intergenic 50.0%
CAATCCCTGCTCTAATCCTG+AGG + chr8_3:1020047-1020066 Msa1268080:CDS 50.0%
GGAACCTCAGGATTAGAGCA+GGG - chr8_3:1020054-1020073 None:intergenic 50.0%
AGGAACCTCAGGATTAGAGC+AGG - chr8_3:1020055-1020074 None:intergenic 50.0%
GTTCTCCATGGAGGACTTTG+AGG + chr8_3:1020125-1020144 Msa1268080:CDS 50.0%
! AGCAGCTTTGGCAAAGTGCA+AGG + chr8_3:1020440-1020459 Msa1268080:CDS 50.0%
! GCTTCACAGAGCATCAACCT+CGG + chr8_3:1021033-1021052 Msa1268080:CDS 50.0%
GAGCCCAAATTTGCAGGATC+AGG + chr8_3:1021055-1021074 Msa1268080:CDS 50.0%
CCCAAATTTGCAGGATCAGG+TGG + chr8_3:1021058-1021077 Msa1268080:CDS 50.0%
TTTGCAGGATCAGGTGGAGA+TGG + chr8_3:1021064-1021083 Msa1268080:CDS 50.0%
!! GAGATGGACGGAGCTAGTTT+TGG + chr8_3:1021080-1021099 Msa1268080:CDS 50.0%
AGCTTCTTCCACTCCTACAC+CGG + chr8_3:1021244-1021263 Msa1268080:CDS 50.0%
TGCCGCAAAAGCTCAATGAC+CGG - chr8_3:1021318-1021337 None:intergenic 50.0%
!! AAGGTGAATAGTGTCGGCGG+TGG - chr8_3:1016896-1016915 None:intergenic 55.0%
GCTGCTGAATTGGACTCTGC+TGG + chr8_3:1017162-1017181 Msa1268080:CDS 55.0%
!! TTCACGTCTGACGGGTTTGG+AGG + chr8_3:1017780-1017799 Msa1268080:CDS 55.0%
GTAGCTGAAGAGGCTGTCTC+AGG + chr8_3:1017931-1017950 Msa1268080:CDS 55.0%
! CATGTTAGAGCGCTCCTGCA+AGG - chr8_3:1018333-1018352 None:intergenic 55.0%
!! TCAGGCACCGGAGAGAAATG+AGG - chr8_3:1018725-1018744 None:intergenic 55.0%
TCGAGGGAGAAATCAGGCAC+CGG - chr8_3:1018737-1018756 None:intergenic 55.0%
CGAGAAGTTGTGCCGAGTCT+TGG + chr8_3:1019059-1019078 Msa1268080:CDS 55.0%
!! GGAGACGCTTGGCTTTGCAA+TGG - chr8_3:1019355-1019374 None:intergenic 55.0%
TATCAATCCCACGGGGACTG+GGG - chr8_3:1019396-1019415 None:intergenic 55.0%
CTATCAATCCCACGGGGACT+GGG - chr8_3:1019397-1019416 None:intergenic 55.0%
TCAGAAGCTGGCACATCGAC+GGG - chr8_3:1019568-1019587 None:intergenic 55.0%
AACAGGCCTGCGAGTAGGAA+TGG - chr8_3:1020550-1020569 None:intergenic 55.0%
TTGTGAACAGGCCTGCGAGT+AGG - chr8_3:1020555-1020574 None:intergenic 55.0%
ACCTCGGAGCCCAAATTTGC+AGG + chr8_3:1021049-1021068 Msa1268080:CDS 55.0%
TCCTGCAAATTTGGGCTCCG+AGG - chr8_3:1021053-1021072 None:intergenic 55.0%
CAGGATCAGGTGGAGATGGA+CGG + chr8_3:1021068-1021087 Msa1268080:CDS 55.0%
! CGGCCATGTTTTTCCGGTGT+AGG - chr8_3:1021260-1021279 None:intergenic 55.0%
ACACCGGAAAAACATGGCCG+AGG + chr8_3:1021260-1021279 Msa1268080:CDS 55.0%
TCATGAAGGGGTTCGCAACC+TGG - chr8_3:1021399-1021418 None:intergenic 55.0%
!! GAGAGGGTGCCATGAATGTC+TGG + chr8_3:1021460-1021479 Msa1268080:three_prime_UTR 55.0%
!! GGAGGTGGTAGTGGTAGTGG+TGG - chr8_3:1016441-1016460 None:intergenic 60.0%
!! GGAGGAGGTGGTAGTGGTAG+TGG - chr8_3:1016444-1016463 None:intergenic 60.0%
! GCTTCTGCCTTTTCCCAGCC+TGG - chr8_3:1018041-1018060 None:intergenic 60.0%
GGCTCTGTCTAGGTCCTTGC+AGG + chr8_3:1018316-1018335 Msa1268080:CDS 60.0%
TGTGCAAGTGCAGCAGGACC+AGG - chr8_3:1018623-1018642 None:intergenic 60.0%
ATCCTGCAGCAGGAGACGCT+TGG - chr8_3:1019366-1019385 None:intergenic 60.0%
ATCAATCCCACGGGGACTGG+GGG - chr8_3:1019395-1019414 None:intergenic 60.0%
GCTATCAATCCCACGGGGAC+TGG - chr8_3:1019398-1019417 None:intergenic 60.0%
CGCAGGCCTGTTCACAACAG+TGG + chr8_3:1020558-1020577 Msa1268080:intron 60.0%
AGCCAAGCGTCTCCTGCTGC+AGG + chr8_3:1019361-1019380 Msa1268080:CDS 65.0%
! GGGGCTGGTGATCCTGCAGC+AGG - chr8_3:1019376-1019395 None:intergenic 70.0%
TCACCAGCCCCCAGTCCCCG+TGG + chr8_3:1019385-1019404 Msa1268080:CDS 75.0%
CACCAGCCCCCAGTCCCCGT+GGG + chr8_3:1019386-1019405 Msa1268080:CDS 75.0%
ATCCCACGGGGACTGGGGGC+TGG - chr8_3:1019391-1019410 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1016353 1021746 1016353 ID=Msa1268080;Name=Msa1268080
chr8_3 mRNA 1016353 1021746 1016353 ID=Msa1268080-mRNA-1;Parent=Msa1268080;Name=Msa1268080-mRNA-1;_AED=0.02;_eAED=0.02;_QI=254|1|1|1|0.8|0.66|6|421|1081
chr8_3 exon 1016353 1016575 1016353 ID=Msa1268080-mRNA-1:exon:103;Parent=Msa1268080-mRNA-1
chr8_3 exon 1017071 1017206 1017071 ID=Msa1268080-mRNA-1:exon:104;Parent=Msa1268080-mRNA-1
chr8_3 exon 1017733 1017952 1017733 ID=Msa1268080-mRNA-1:exon:105;Parent=Msa1268080-mRNA-1
chr8_3 exon 1018042 1020484 1018042 ID=Msa1268080-mRNA-1:exon:106;Parent=Msa1268080-mRNA-1
chr8_3 exon 1020756 1020798 1020756 ID=Msa1268080-mRNA-1:exon:107;Parent=Msa1268080-mRNA-1
chr8_3 exon 1020891 1021746 1020891 ID=Msa1268080-mRNA-1:exon:108;Parent=Msa1268080-mRNA-1
chr8_3 five_prime_UTR 1016353 1016575 1016353 ID=Msa1268080-mRNA-1:five_prime_utr;Parent=Msa1268080-mRNA-1
chr8_3 five_prime_UTR 1017071 1017101 1017071 ID=Msa1268080-mRNA-1:five_prime_utr;Parent=Msa1268080-mRNA-1
chr8_3 CDS 1017102 1017206 1017102 ID=Msa1268080-mRNA-1:cds;Parent=Msa1268080-mRNA-1
chr8_3 CDS 1017733 1017952 1017733 ID=Msa1268080-mRNA-1:cds;Parent=Msa1268080-mRNA-1
chr8_3 CDS 1018042 1020484 1018042 ID=Msa1268080-mRNA-1:cds;Parent=Msa1268080-mRNA-1
chr8_3 CDS 1020756 1020798 1020756 ID=Msa1268080-mRNA-1:cds;Parent=Msa1268080-mRNA-1
chr8_3 CDS 1020891 1021325 1020891 ID=Msa1268080-mRNA-1:cds;Parent=Msa1268080-mRNA-1
chr8_3 three_prime_UTR 1021326 1021746 1021326 ID=Msa1268080-mRNA-1:three_prime_utr;Parent=Msa1268080-mRNA-1
Gene Sequence

>Msa1268080

ATGGATAGAAGATGGCCTTGGAAGAAAAAATCATCTGATAAGACTGTTCTTGAGAAAGTTGCTGCTGAATTGGACTCTGCTGGTGCATCTAATCAACCCAAACAGGATGTTTATAAGAAGCCGAACCATGTCCAAATTTCTGTAGAGTCATATTCACGTCTGACGGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAGGTTCAGACACTTGAGGATGAGATCAATGAATTAAATGATAAACTGTCAGCAGCAAACACAGAGATAAATACCAAGGAAGCTTTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAACAGTCTAGAATCTGTCACTCTTTCGAAACTGACTGCTGAGGATCAGGCGTCACAGTTAGACGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAAGAAGAACATGAACTGAAAATACAGGATATTTCCCTTGCAAAAACCAAGCAATTGGACAAGATTAAGGGTGATCTTGAGGCTAGGATACGGAACTTTGAACAGGAACTTCTCAGGTCTGCTGCTGATAATGCGGCTCTGTCTAGGTCCTTGCAGGAGCGCTCTAACATGCTAGTAAAACTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCATCAAAAGAACACCGTAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAGCTGCATGTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCTGAGTGTCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTGGAAGTTGAAAGTCTTGGCCGAGATTATGGCGAAACTCGATTGCGGAAATCTCCTGTTAAACCTTCTAGTCCTCATTTCTCTCCGGTGCCTGATTTCTCCCTCGAGAATATACAGAAATTCCAAAAAGATAATGAATTTCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGTCAAAACGTAACAGCGAATTGCAGGCATCAAGAAGTATGTGTGCCAAAACACTTAGCAAACTTCAAATTTTGGAAGCACAAGGCCAGACAAGTAATCAGCAGAAGGGATCTCCAAAATCTCCCATCCATATGAACCATGAAAGCATATACAGCCAAAATACAGGCTATGCAGCAAGCATGATCTCCATTTCTGAAGATGGTAATGATGATGCGAGAAGTTGTGCCGAGTCTTGGTCGACAGCAATAATCTCTGAGCTATCCCAACTCCCAAAAGAAAAGAATGCTGACGAATTGGGCAAATCTGAGGCGACTAAGAAGTTAGAACTGATGGATGACTTCCTAGAGGTGGAGAAATTTGCTGGATTATCAAATGATTCTAATGAAGACACCTCTTTGCCATTTACTTCAAACAATAAGACAGACGAAATCATGACCAATGATGTATCTGAAGTCAGTACCAGCAAAGATGATATATCCGAGCCTGAAAAGAAGAGTGATTTGAATCCATTGCAAAGCCAAGCGTCTCCTGCTGCAGGATCACCAGCCCCCAGTCCCCGTGGGATTGATAGCTTTTCACCAGCAGATCTTCAATCAAGAATACTGTCAGTGTTTGAATCTATGGCTAAGGATGCTGATGTAGGTAAGATCCTGAAGGATATTAAACATGTTCTTGAAGAAGTACGTGATACTTCCATCCAAGACTCTGTAGCTGAAATTCCCGTCGATGTGCCAGCTTCTGATACTCCATGTGATAAAAAGGATGATCCTGAAGATTTTGGTTCAGTTTCAGAAAAAGAACTTACATCATCCCAAGAACCTTCTGAGTGTATGCAGATAACTTCTGATATAGAAGCTGCAATTTCTCAAATTCACGACTTCGTGTTGTTCCTTGGCAGAGAAGCAATGACAGTTCATGATATATCTTCTGATGGAGATGGTATAAGCCAAAAGATGGAGGAGTTTTCTGTTACTTATAATAAAGTCAAATGCCATGAAGCAAGTTTGCTACAGTTTGTTCTTGATCTGTCTCATTTCTTGGCTAAAACAAGTGAATTCAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCCCTGCCTGAAAATAAGTTAGTTCAAGAAAATTCGTCGGGAGAGAGATATCAAAATGGTCATTCTCATATTCTCAATCCCTGCTCTAATCCTGAGGTTCCTGATGATGGAAATTTGACATCAAGTTATGAATCAAATGTCACGTCACAAAAGTTCTCCATGGAGGACTTTGAGGAATTGAGATTAGAGAAAGAGAAGGCAATTGTGGATCTGTCAAAATATTCTGAAAATCTTGAAATTACAAAATCTCAGTTACAAGAGACCGAGCAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAGGTCAAACAGCTTGTCCGAGACTCAACTCAAATGCATGGCAGAGTCATACAGATCACTTGAAACACGTGCACAGGAGTTTGAAACTGAGCTCAACCATCTACGAATGAAGACAGAAACTCTTGAGAATGAACTTAAAGATGAAAAGAGATCTCATGAAGCAGCTTTGGCAAAGTGCAAGGAGCTAGAAGAACAATTGCAAAGGAATGAGAGTTCAGCTGCTGATAATGAAATTCAGACTAAAAAGGAGAGAGACTTGGCTTCTGCTGCTGAAAAGTTAGCCGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGCTAAAAGCTATGCATCCTCAAACAGAACCAATGGGATCTATGTACAGTGAGAAGCTTTTGAAGGTTGAAGGCTTCACAGAGCATCAACCTCGGAGCCCAAATTTGCAGGATCAGGTGGAGATGGACGGAGCTAGTTTTGGTTTTATGCAAAGGCAGGGTGCAGAGTCCCCTTTGCATTTTACAAACACTTTATATAGTCCATCAGATAATGACTCAAACTTTCAAGCCATATCTCCTGTACACCATCCAAATCACAAGCCTACAAAGTCAGCCTCTTCATCAGCTTCTTCCACTCCTACACCGGAAAAACATGGCCGAGGTTTTAGCAGATTCTTTTCATCAAAAGGAAAAACCGGTCATTGA
Protein sequence

>Msa1268080

MDRRWPWKKKSSDKTVLEKVAAELDSAGASNQPKQDVYKKPNHVQISVESYSRLTGLEDQVKTYEEKVQTLEDEINELNDKLSAANTEINTKEALVKQHAKVAEEAVSGWEKAEAEALALKNSLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQDISLAKTKQLDKIKGDLEARIRNFEQELLRSAADNAALSRSLQERSNMLVKLSEEKAHAEAEIEHQKNTVESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPSSPHFSPVPDFSLENIQKFQKDNEFLTERLLTMEEETKMLKEALSKRNSELQASRSMCAKTLSKLQILEAQGQTSNQQKGSPKSPIHMNHESIYSQNTGYAASMISISEDGNDDARSCAESWSTAIISELSQLPKEKNADELGKSEATKKLELMDDFLEVEKFAGLSNDSNEDTSLPFTSNNKTDEIMTNDVSEVSTSKDDISEPEKKSDLNPLQSQASPAAGSPAPSPRGIDSFSPADLQSRILSVFESMAKDADVGKILKDIKHVLEEVRDTSIQDSVAEIPVDVPASDTPCDKKDDPEDFGSVSEKELTSSQEPSECMQITSDIEAAISQIHDFVLFLGREAMTVHDISSDGDGISQKMEEFSVTYNKVKCHEASLLQFVLDLSHFLAKTSEFRFNILGYKGMETETNSPDCIDKIALPENKLVQENSSGERYQNGHSHILNPCSNPEVPDDGNLTSSYESNVTSQKFSMEDFEELRLEKEKAIVDLSKYSENLEITKSQLQETEQLLAEVKSQLASAQRSNSLSETQLKCMAESYRSLETRAQEFETELNHLRMKTETLENELKDEKRSHEAALAKCKELEEQLQRNESSAADNEIQTKKERDLASAAEKLAECQETIYLLGKQLKAMHPQTEPMGSMYSEKLLKVEGFTEHQPRSPNLQDQVEMDGASFGFMQRQGAESPLHFTNTLYSPSDNDSNFQAISPVHHPNHKPTKSASSSASSTPTPEKHGRGFSRFFSSKGKTGH*