AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268100 MtrunA17_Chr1g0156371 98.242 1081 19 0 1 1081 1 1081 0.0 2175
Msa1268100 MtrunA17_Chr3g0142411 69.937 1111 289 9 1 1081 1 1096 0.0 1452
Msa1268100 MtrunA17_Chr5g0405291 49.412 510 222 7 1 503 1 481 1.53e-125 402
Msa1268100 MtrunA17_Chr5g0405291 34.591 318 168 9 798 1081 455 766 3.23e-35 144
Msa1268100 MtrunA17_Chr4g0053121 36.255 502 265 8 1 500 1 449 5.50e-65 239
Msa1268100 MtrunA17_Chr1g0159951 42.918 233 108 2 67 299 136 343 4.53e-42 166
Msa1268100 MtrunA17_Chr8g0384881 39.216 306 146 7 1 299 1 273 1.56e-40 159
Msa1268100 MtrunA17_Chr3g0130811 40.708 226 111 3 74 299 55 257 9.19e-34 139
Msa1268100 MtrunA17_Chr4g0044561 31.507 365 227 8 142 500 86 433 2.22e-28 123
Msa1268100 MtrunA17_Chr5g0401911 33.333 261 144 4 1 260 1 232 3.24e-28 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268100 AT1G19835.6 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G19835.5 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G19835.3 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G19835.1 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G19835.4 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G19835.2 51.045 1101 397 19 1 1078 1 982 0.0 919
Msa1268100 AT1G47900.2 48.164 1144 430 23 1 1076 1 1049 0.0 890
Msa1268100 AT1G47900.3 48.080 1146 430 24 1 1076 1 1051 0.0 886
Msa1268100 AT1G47900.1 48.080 1146 430 24 1 1076 1 1051 0.0 886
Msa1268100 AT4G36120.2 52.372 506 219 5 3 498 4 497 4.23e-152 479
Msa1268100 AT4G36120.1 52.372 506 219 5 3 498 4 497 4.23e-152 479
Msa1268100 AT2G23360.1 35.893 521 248 13 1 515 1 441 2.16e-65 239
Msa1268100 AT3G05270.3 38.538 301 138 8 1 299 1 256 1.98e-37 150
Msa1268100 AT3G05270.2 38.538 301 138 8 1 299 1 256 1.98e-37 150
Msa1268100 AT3G05270.1 38.538 301 138 8 1 299 1 256 1.98e-37 150
Msa1268100 AT1G77580.2 39.912 228 102 3 71 298 58 250 6.95e-34 140
Msa1268100 AT1G77580.3 39.912 228 102 3 71 298 58 250 6.95e-34 140
Msa1268100 AT1G77580.1 39.912 228 102 3 71 298 24 216 7.99e-34 139
Msa1268100 AT1G77580.4 39.912 228 102 3 71 298 24 216 8.61e-34 140
Msa1268100 AT1G21810.3 36.190 210 92 1 89 298 13 180 1.99e-27 119
Msa1268100 AT1G21810.1 36.190 210 92 1 89 298 13 180 1.99e-27 119
Msa1268100 AT2G24470.1 56.338 71 31 0 162 232 22 92 8.89e-17 77.0
Msa1268100 AT3G19370.3 42.991 107 61 0 196 302 156 262 1.60e-15 82.0
Msa1268100 AT3G19370.1 42.991 107 61 0 196 302 156 262 1.60e-15 82.0
Msa1268100 AT3G19370.2 42.991 107 61 0 196 302 156 262 1.60e-15 82.0

Find 242 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAGGTGGTTTGGGTTTA+AGG 0.057296 8_3:-1047735 None:intergenic
TCAGTTCATGTTCTTCTTTC+AGG 0.092243 8_3:-1049385 None:intergenic
TCCACCTGATCCTGCAAATT+TGG 0.097144 8_3:-1052266 None:intergenic
TCTTGATCTGTCTCATTTCT+TGG 0.164294 8_3:+1051071 Msa1268100:CDS
ATAAAATATATTACCATTAA+AGG 0.171660 8_3:+1052905 Msa1268100:three_prime_UTR
AAGGATGATCCTGAAGATTT+TGG 0.192360 8_3:+1050811 Msa1268100:CDS
TTCATATGGATGGGAGATTT+TGG 0.201783 8_3:-1050166 None:intergenic
ATTTAATATCCTTGGTTATA+AGG 0.215009 8_3:+1051113 Msa1268100:CDS
GTCTTATTGTTTGAAGTAAA+TGG 0.215951 8_3:-1050451 None:intergenic
TAATAACCGCACCCCTTTAA+TGG 0.221743 8_3:-1052918 None:intergenic
TGGGAGGATTGTGTAGTTAA+AGG 0.221849 8_3:+1052645 Msa1268100:three_prime_UTR
ACTTAGCAAACTTCAAATTT+TGG 0.228892 8_3:+1050105 Msa1268100:CDS
AAGACCATAGTCATTGTTAA+AGG 0.235685 8_3:-1052840 None:intergenic
CAAGCAATTGGACAAGATTA+AGG 0.237668 8_3:+1049436 Msa1268100:CDS
CAGAAAACTCCTCCATCTTT+TGG 0.257130 8_3:-1050999 None:intergenic
TTGCTGCATAGCCTGTATTT+TGG 0.257557 8_3:-1050207 None:intergenic
ATTGCGAATTTCAAGCTCTT+TGG 0.257885 8_3:-1049678 None:intergenic
TTGAAGTTTGCTAAGTGTTT+TGG 0.260849 8_3:-1050098 None:intergenic
AATATGACTCTACAGAAATT+TGG 0.262881 8_3:-1048966 None:intergenic
TGATACTCCATGTGATAAAA+AGG 0.263448 8_3:+1050792 Msa1268100:CDS
GAAAGTCTTGGCCGAGATTA+TGG 0.264945 8_3:+1049866 Msa1268100:CDS
TTTGGCTGTATATGCTTTCA+TGG 0.269714 8_3:-1050189 None:intergenic
GTCAATGTTTACAAATATAA+AGG 0.271113 8_3:-1052760 None:intergenic
CTGCTTGCCAAGAAGATATA+TGG 0.272289 8_3:-1052147 None:intergenic
GGCTACACGGTAATGATATT+TGG 0.284416 8_3:+1052574 Msa1268100:three_prime_UTR
AGAATGTGATTGTGATATTA+AGG 0.293253 8_3:-1047687 None:intergenic
GCTATCAATCCCACGGGGAC+TGG 0.303633 8_3:-1050602 None:intergenic
TGAGAAAGTTGCTGCTGAAT+TGG 0.315843 8_3:+1048358 Msa1268100:CDS
GACTTTGTAGGCTTGTGATT+TGG 0.317402 8_3:-1052416 None:intergenic
CTAGAGGTGGAGAAATTTGC+TGG 0.321649 8_3:+1050394 Msa1268100:CDS
TACAAAGCATATACCTGTTT+GGG 0.323101 8_3:-1048404 None:intergenic
CTACAAAGCATATACCTGTT+TGG 0.328607 8_3:-1048405 None:intergenic
CCACCTGATCCTGCAAATTT+GGG 0.328853 8_3:-1052265 None:intergenic
CTTTCCTTTAACAATGACTA+TGG 0.328961 8_3:+1052836 Msa1268100:three_prime_UTR
TTTAATATCCTTGGTTATAA+GGG 0.333038 8_3:+1051114 Msa1268100:CDS
GGCTCTGTCTAGGTCCTTGC+AGG 0.333327 8_3:+1049523 Msa1268100:CDS
TAAAATATATTACCATTAAA+GGG 0.336309 8_3:+1052906 Msa1268100:three_prime_UTR
ACTGTCAGTGTTTGAATCTA+TGG 0.340845 8_3:+1050654 Msa1268100:CDS
CTATCAATCCCACGGGGACT+GGG 0.341097 8_3:-1050601 None:intergenic
GACAGTCTCTGAAATATTAC+AGG 0.341977 8_3:+1052780 Msa1268100:three_prime_UTR
AGAAAAGAATGCTGACGAAT+TGG 0.344363 8_3:+1050327 Msa1268100:CDS
CAGGAAACCATATATCTTCT+TGG 0.344485 8_3:+1052140 Msa1268100:CDS
GATGAAGAGGCTGACTTTGT+AGG 0.345777 8_3:-1052428 None:intergenic
AATAAATGGGAGAGGTGGTT+TGG 0.347005 8_3:-1047743 None:intergenic
TAATGAAATTCAGACTAAAA+AGG 0.347824 8_3:+1051984 Msa1268100:CDS
GAAACTGAACCAAAATCTTC+AGG 0.348387 8_3:-1050820 None:intergenic
CCTTCTGCTGATTACTTGTC+TGG 0.348966 8_3:-1050138 None:intergenic
GCATACACTCAGAAGGTTCT+TGG 0.355846 8_3:-1050864 None:intergenic
ACCTCGGAGCCCAAATTTGC+AGG 0.363025 8_3:+1052256 Msa1268100:CDS
GAGATGGACGGAGCTAGTTT+TGG 0.363929 8_3:+1052287 Msa1268100:CDS
ATAAATGGGAGAGGTGGTTT+GGG 0.373440 8_3:-1047742 None:intergenic
GAGAGGTGGTTTGGGTTTAA+GGG 0.376188 8_3:-1047734 None:intergenic
GAACATGTTTAATATCCTTC+AGG 0.376801 8_3:-1050702 None:intergenic
CTCGGATATATCATCTTTGC+TGG 0.377440 8_3:-1050512 None:intergenic
ATCATTACCATCTTCAGAAA+TGG 0.383278 8_3:-1050239 None:intergenic
TGAGGACTAGAAGGTTTAAC+AGG 0.386914 8_3:-1049911 None:intergenic
TGGATGGTGTACAGGAGATA+TGG 0.388288 8_3:-1052396 None:intergenic
GATAAATACCAAGGAAGCTT+TGG 0.391489 8_3:+1049098 Msa1268100:CDS
AGCTGAAGTTAAATCACAAT+TGG 0.392320 8_3:+1051455 Msa1268100:CDS
CTTAATCTTGTCCAATTGCT+TGG 0.394678 8_3:-1049435 None:intergenic
GTTCTCCATGGAGGACTTTG+AGG 0.394789 8_3:+1051332 Msa1268100:CDS
GAAAAGAATGCTGACGAATT+GGG 0.401808 8_3:+1050328 Msa1268100:CDS
ATATGCTTTCATGGTTCATA+TGG 0.402247 8_3:-1050180 None:intergenic
ATATTCACGTCTGACGGGTT+TGG 0.402685 8_3:+1048984 Msa1268100:CDS
ACTGTAGCAAACTTGCTTCA+TGG 0.403189 8_3:-1051044 None:intergenic
GATCCCATTGGTTCTGTTTG+AGG 0.404007 8_3:-1052185 None:intergenic
ACAGAAATTTGGACATGGTT+CGG 0.410753 8_3:-1048955 None:intergenic
CACGACTTCGTGTTGTTCCT+TGG 0.413839 8_3:+1050925 Msa1268100:CDS
GAGATCTCATGAAGCAGCTT+TGG 0.414919 8_3:+1051635 Msa1268100:CDS
AAAACGTAACAGCGAATTGC+AGG 0.418739 8_3:+1050057 Msa1268100:CDS
GGTGGTAGTGGTAGTGGTAG+TGG 0.424549 8_3:-1047660 None:intergenic
TTCATTTGTGCAAGTGCAGC+AGG 0.425188 8_3:-1049833 None:intergenic
CTGATAATGCGGCTCTGTCT+AGG 0.427732 8_3:+1049513 Msa1268100:CDS
GAAACTGACTGCTGAGGATC+AGG 0.428547 8_3:+1049313 Msa1268100:CDS
TTCTCTTTCACATGATTCTA+CGG 0.433391 8_3:-1049621 None:intergenic
TTTCTGTCTTCATTCGTAGA+TGG 0.433666 8_3:-1051584 None:intergenic
GATGTCAAATTTCCATCATC+AGG 0.434545 8_3:-1051279 None:intergenic
GGAGGAGGTGGTAGTGGTAG+TGG 0.436506 8_3:-1047666 None:intergenic
AATCCTGAGGTTCCTGATGA+TGG 0.437920 8_3:+1051267 Msa1268100:CDS
TATTATATAATAGTAGTAGA+AGG 0.445311 8_3:+1047578 Msa1268100:five_prime_UTR
AGCTGCTAACAAGCAGCATA+TGG 0.446965 8_3:+1049733 Msa1268100:CDS
AAGGAAAAGAATACAACATA+TGG 0.447308 8_3:-1052726 None:intergenic
GAATTCAGATTTAATATCCT+TGG 0.447868 8_3:+1051105 Msa1268100:CDS
TATTAAGGAGGAGGTGGTAG+TGG 0.449031 8_3:-1047672 None:intergenic
TGCATCTAATCAACCCAAAC+AGG 0.451553 8_3:+1048391 Msa1268100:CDS
GAGAGGGTGCCATGAATGTC+TGG 0.451979 8_3:+1052667 Msa1268100:three_prime_UTR
AAGTGTTTGTAAAATGCAAA+GGG 0.452367 8_3:-1052337 None:intergenic
CGAGAAGTTGTGCCGAGTCT+TGG 0.454331 8_3:+1050266 Msa1268100:CDS
TCAATTTCGTTAAATCATGA+AGG 0.454908 8_3:-1052617 None:intergenic
AGCCAAGCGTCTCCTGCTGC+AGG 0.455284 8_3:+1050568 Msa1268100:CDS
CATACACTCAGAAGGTTCTT+GGG 0.458195 8_3:-1050863 None:intergenic
AGAACATGAACTGAAAATAC+AGG 0.458759 8_3:+1049394 Msa1268100:CDS
TCAATGTTTACAAATATAAA+GGG 0.460293 8_3:-1052759 None:intergenic
GCTTTCATGGTTCATATGGA+TGG 0.462160 8_3:-1050176 None:intergenic
CTTGTATCTAATGTTGTACA+TGG 0.462364 8_3:+1052700 Msa1268100:three_prime_UTR
GCAATCTTATCTATGCAATC+AGG 0.462519 8_3:-1051159 None:intergenic
TATCCTTGGTTATAAGGGTA+TGG 0.463385 8_3:+1051119 Msa1268100:CDS
AGCATATACAGCCAAAATAC+AGG 0.468052 8_3:+1050196 Msa1268100:CDS
AGTGAAGACATATGAAGAAA+AGG 0.470909 8_3:+1049014 Msa1268100:CDS
ATTGTGATTTGAGTGAGATA+TGG 0.475292 8_3:+1048289 Msa1268100:exon
TGAAAAGTTAGCCGAGTGTC+AGG 0.477083 8_3:+1052121 Msa1268100:CDS
AAAGGCAGAAGCAGAAGCTT+TGG 0.478071 8_3:+1049256 Msa1268100:CDS
AAATTCTCCAGGCTGGGAAA+AGG 0.482919 8_3:+1049238 Msa1268100:intron
TTTCCATCATCAGGAACCTC+AGG 0.483685 8_3:-1051270 None:intergenic
TATCAATCCCACGGGGACTG+GGG 0.484881 8_3:-1050600 None:intergenic
AAGCAATTGGACAAGATTAA+GGG 0.485157 8_3:+1049437 Msa1268100:CDS
AACTTCAGCTAGAAGTTGCT+CGG 0.486763 8_3:-1051442 None:intergenic
GAATTTCAGCTACAGAGTCT+TGG 0.486988 8_3:-1050750 None:intergenic
ACTTTGAACAGGAACTTCTC+AGG 0.487308 8_3:+1049483 Msa1268100:CDS
GGGGCTGGTGATCCTGCAGC+AGG 0.488978 8_3:-1050580 None:intergenic
GCTGCTGAATTGGACTCTGC+TGG 0.489054 8_3:+1048368 Msa1268100:CDS
ATGATCTCCATTTCTGAAGA+TGG 0.489920 8_3:+1050232 Msa1268100:CDS
TATAATAGTAGTAGAAGGTA+AGG 0.490155 8_3:+1047583 Msa1268100:five_prime_UTR
GAGCCCAAATTTGCAGGATC+AGG 0.490198 8_3:+1052262 Msa1268100:CDS
TTTAACGAAATTGAGCTTGT+GGG 0.494026 8_3:+1052626 Msa1268100:three_prime_UTR
ATATCATTACCAGACATTCA+TGG 0.495064 8_3:-1052676 None:intergenic
GGAGAGAAATGAGGACTAGA+AGG 0.495341 8_3:-1049920 None:intergenic
TCATGAAGGGGTTCGCAACC+TGG 0.497052 8_3:-1052603 None:intergenic
TTGTGATTTGGATGGTGTAC+AGG 0.497419 8_3:-1052404 None:intergenic
ATATTCTCGAGGGAGAAATC+AGG 0.498205 8_3:-1049947 None:intergenic
TCAGAAGCTGGCACATCGAC+GGG 0.504799 8_3:-1050772 None:intergenic
TTCTAGTCCTCATTTCTCTC+CGG 0.504915 8_3:+1049922 Msa1268100:CDS
GTAGCTGAAGAGGCTGTCTC+AGG 0.506912 8_3:+1049138 Msa1268100:CDS
TTAGTTCAAGAAAATTCGTC+GGG 0.507234 8_3:+1051198 Msa1268100:CDS
ATATGGATAGAAGATGGCCT+TGG 0.509231 8_3:+1048306 Msa1268100:exon
ATCCTGCAGCAGGAGACGCT+TGG 0.510537 8_3:-1050570 None:intergenic
AAAGTGTTTGTAAAATGCAA+AGG 0.511679 8_3:-1052338 None:intergenic
TAGGATACGGAACTTTGAAC+AGG 0.511809 8_3:+1049472 Msa1268100:CDS
TTCACGTCTGACGGGTTTGG+AGG 0.513254 8_3:+1048987 Msa1268100:CDS
ATCACTTGAAACACGTGCAC+AGG 0.515281 8_3:+1051542 Msa1268100:CDS
CAGTGAAGATTCATGATATG+AGG 0.516624 8_3:+1052553 Msa1268100:three_prime_UTR
CACAATTGGCTTCTGCTCAA+AGG 0.517000 8_3:+1051469 Msa1268100:CDS
CCCAAATTTGCAGGATCAGG+TGG 0.517045 8_3:+1052265 Msa1268100:CDS
ATTCTTGATTGAAGATCTGC+TGG 0.518048 8_3:-1050631 None:intergenic
CTTTCATGGTTCATATGGAT+GGG 0.519994 8_3:-1050175 None:intergenic
AAGTTTGAGTCATTATCTGA+TGG 0.520066 8_3:-1052368 None:intergenic
TATAAAGGGAAACAATGAAA+AGG 0.521693 8_3:-1052745 None:intergenic
CAGCAAATTTCTCCACCTCT+AGG 0.522984 8_3:-1050393 None:intergenic
CTCATATCATGAATCTTCAC+TGG 0.524069 8_3:-1052552 None:intergenic
ATCAATCCCACGGGGACTGG+GGG 0.524378 8_3:-1050599 None:intergenic
AGAGAAAGAGAAGGCAATTG+TGG 0.526170 8_3:+1051365 Msa1268100:CDS
ATCGAGTTTCGCCATAATCT+CGG 0.528105 8_3:-1049877 None:intergenic
TTGTAGGCTTGTGATTTGGA+TGG 0.529818 8_3:-1052412 None:intergenic
AGGAACCTCAGGATTAGAGC+AGG 0.530360 8_3:-1051259 None:intergenic
AGCTTCTTCCACTCCTACAC+CGG 0.531327 8_3:+1052451 Msa1268100:CDS
AATGATATTTGGACAGCACC+AGG 0.531907 8_3:+1052585 Msa1268100:three_prime_UTR
TTGTGATATTAAGGAGGAGG+TGG 0.533813 8_3:-1047678 None:intergenic
TGCACTTGCACAAATGAAGC+TGG 0.533816 8_3:+1049838 Msa1268100:CDS
GAGTCATATTCACGTCTGAC+GGG 0.534329 8_3:+1048979 Msa1268100:CDS
TCGGGAGAGAGATATCAAAA+TGG 0.535384 8_3:+1051216 Msa1268100:CDS
AGATGGTATAAGCCAAAAGA+TGG 0.536768 8_3:+1050987 Msa1268100:CDS
ATCAGAAGCTGGCACATCGA+CGG 0.537438 8_3:-1050773 None:intergenic
AGTGGAAGAAGCTGATGAAG+AGG 0.542780 8_3:-1052441 None:intergenic
TTTGCAGGATCAGGTGGAGA+TGG 0.543626 8_3:+1052271 Msa1268100:CDS
GTTCATGATATATCTTCTGA+TGG 0.544329 8_3:+1050964 Msa1268100:CDS
AATTAGAGGCTGAGTGTCAA+AGG 0.544913 8_3:+1049777 Msa1268100:CDS
ATTTAACGAAATTGAGCTTG+TGG 0.545126 8_3:+1052625 Msa1268100:three_prime_UTR
CAATTTCGTTAAATCATGAA+GGG 0.545399 8_3:-1052616 None:intergenic
CAATTCCTCAAAGTCCTCCA+TGG 0.546558 8_3:-1051337 None:intergenic
AAAGGTTACGTGGTCTAGTA+CGG 0.546735 8_3:+1049795 Msa1268100:CDS
AAGAAAAGAACATGAGTATG+AGG 0.546898 8_3:+1049702 Msa1268100:CDS
GCATCCTCAAACAGAACCAA+TGG 0.547812 8_3:+1052181 Msa1268100:CDS
GGAATTTCTGTATATTCTCG+AGG 0.548279 8_3:-1049958 None:intergenic
CATGCATTTGAGTTGAGTCT+CGG 0.550144 8_3:-1051505 None:intergenic
TACAGAGCGCTTATTGACAA+TGG 0.550529 8_3:+1050000 Msa1268100:CDS
ATTGAGATTAGAGAAAGAGA+AGG 0.551379 8_3:+1051356 Msa1268100:CDS
ACATGCTAAAGTAGCTGAAG+AGG 0.551814 8_3:+1049128 Msa1268100:CDS
GTTAGTTCAAGAAAATTCGT+CGG 0.552800 8_3:+1051197 Msa1268100:CDS
CCAGACAAGTAATCAGCAGA+AGG 0.556259 8_3:+1050138 Msa1268100:CDS
CTGTCATTGCTTCTCTGCCA+AGG 0.558008 8_3:-1050942 None:intergenic
GTGATCTTGAGGCTAGGATA+CGG 0.560014 8_3:+1049459 Msa1268100:CDS
GGAGACGCTTGGCTTTGCAA+TGG 0.560591 8_3:-1050559 None:intergenic
AAAAGAATCTGCTAAAACCT+CGG 0.562481 8_3:-1052484 None:intergenic
AGCAGCTTTGGCAAAGTGCA+AGG 0.562788 8_3:+1051647 Msa1268100:CDS
AGTGAGATATGGATAGAAGA+TGG 0.564925 8_3:+1048300 Msa1268100:exon
GATATATCTTCTGATGGAGA+TGG 0.568592 8_3:+1050970 Msa1268100:CDS
TTCAGCTACAGAGTCTTGGA+TGG 0.569854 8_3:-1050746 None:intergenic
TGTGCAAGTGCAGCAGGACC+AGG 0.570936 8_3:-1049827 None:intergenic
TGCCGCAAAAGCTCAATGAC+CGG 0.572380 8_3:-1052522 None:intergenic
TCCTGCAAATTTGGGCTCCG+AGG 0.575513 8_3:-1052257 None:intergenic
AAGCTGGAAGTTGAAAGTCT+TGG 0.575557 8_3:+1049854 Msa1268100:CDS
GACTAAGAAGTTAGAACTGA+TGG 0.576324 8_3:+1050363 Msa1268100:CDS
CATCCTCAAACAGAACCAAT+GGG 0.577158 8_3:+1052182 Msa1268100:CDS
TCACATGGAGTATCAGAAGC+TGG 0.577531 8_3:-1050784 None:intergenic
CAAGATTAAGGGTGATCTTG+AGG 0.577662 8_3:+1049448 Msa1268100:CDS
TTGATCATAGGAGAGAGACT+TGG 0.578161 8_3:+1052088 Msa1268100:intron
ATATTACCATTAAAGGGGTG+CGG 0.579062 8_3:+1052912 Msa1268100:three_prime_UTR
ATGGCTAAGGATGCTGATGT+AGG 0.582211 8_3:+1050673 Msa1268100:CDS
AAATCTGTCATTTATGACCA+TGG 0.582897 8_3:-1052876 None:intergenic
GTTTGAAGTAAATGGCAAAG+AGG 0.583585 8_3:-1050443 None:intergenic
TGCTAACAAGCAGCATATGG+AGG 0.587476 8_3:+1049736 Msa1268100:CDS
GAATTTCTGTATATTCTCGA+GGG 0.588350 8_3:-1049957 None:intergenic
TGAAAAGCTATCAATCCCAC+GGG 0.590101 8_3:-1050608 None:intergenic
CACGTCACAAAAGTTCTCCA+TGG 0.591616 8_3:+1051320 Msa1268100:CDS
CAGGTCTGCTGCTGATAATG+CGG 0.592535 8_3:+1049502 Msa1268100:CDS
GGTAGTGGTAGTGGTAGTGG+TGG 0.592636 8_3:-1047657 None:intergenic
CAGGATCAGGTGGAGATGGA+CGG 0.595264 8_3:+1052275 Msa1268100:CDS
ATAATAATAATAAATGGGAG+AGG 0.595581 8_3:-1047751 None:intergenic
GTGAAAAGCTATCAATCCCA+CGG 0.595662 8_3:-1050609 None:intergenic
CATGTTAGAGCGCTCCTGCA+AGG 0.598974 8_3:-1049537 None:intergenic
TCACTGTACATAGATCCCAT+TGG 0.599900 8_3:-1052197 None:intergenic
TGATTGTGATATTAAGGAGG+AGG 0.600565 8_3:-1047681 None:intergenic
TCGAGGGAGAAATCAGGCAC+CGG 0.602488 8_3:-1049941 None:intergenic
CAATCCCTGCTCTAATCCTG+AGG 0.602697 8_3:+1051254 Msa1268100:CDS
AACGAAATTGAGCTTGTGGG+AGG 0.602754 8_3:+1052629 Msa1268100:three_prime_UTR
TTAAGGGTGATCTTGAGGCT+AGG 0.602821 8_3:+1049453 Msa1268100:CDS
AGCTAGAAGAACAATTGCAA+AGG 0.604021 8_3:+1051670 Msa1268100:CDS
ATATATGGTTTCCTGACACT+CGG 0.607908 8_3:-1052132 None:intergenic
ATAATAATAAATGGGAGAGG+TGG 0.608089 8_3:-1047748 None:intergenic
CGAGACTCAACTCAAATGCA+TGG 0.608379 8_3:+1051506 Msa1268100:CDS
TCAGGCACCGGAGAGAAATG+AGG 0.609792 8_3:-1049929 None:intergenic
AAAATATATTACCATTAAAG+GGG 0.611457 8_3:+1052907 Msa1268100:three_prime_UTR
AGAGTCATATTCACGTCTGA+CGG 0.613924 8_3:+1048978 Msa1268100:CDS
CAGACAAGTAATCAGCAGAA+GGG 0.615118 8_3:+1050139 Msa1268100:CDS
AGTGTTTGAATCTATGGCTA+AGG 0.616003 8_3:+1050660 Msa1268100:CDS
GGATTGTGTAGTTAAAGGAG+AGG 0.616290 8_3:+1052650 Msa1268100:three_prime_UTR
TGACGAATTGGGCAAATCTG+AGG 0.616648 8_3:+1050339 Msa1268100:CDS
GATCAGGCGTCACAGTTAGA+CGG 0.617015 8_3:+1049329 Msa1268100:CDS
AATTTCGTTAAATCATGAAG+GGG 0.620082 8_3:-1052615 None:intergenic
GTTATCTGCATACACTCAGA+AGG 0.621671 8_3:-1050871 None:intergenic
GCTAACAAGCAGCATATGGA+GGG 0.621875 8_3:+1049737 Msa1268100:CDS
TATTGCTGTCGACCAAGACT+CGG 0.624331 8_3:-1050278 None:intergenic
GATTGTGTAGTTAAAGGAGA+GGG 0.634854 8_3:+1052651 Msa1268100:three_prime_UTR
ATGTGATTGTGATATTAAGG+AGG 0.635332 8_3:-1047684 None:intergenic
GATGGATGACTTCCTAGAGG+TGG 0.638572 8_3:+1050381 Msa1268100:CDS
TTTCCATACCCTTATAACCA+AGG 0.638601 8_3:-1051122 None:intergenic
ATTCATGATATGAGGCTACA+CGG 0.641736 8_3:+1052561 Msa1268100:three_prime_UTR
TGGTATAAGCCAAAAGATGG+AGG 0.642588 8_3:+1050990 Msa1268100:CDS
GGAACCTCAGGATTAGAGCA+GGG 0.651732 8_3:-1051258 None:intergenic
AGAAAAGGTTCAGACACTTG+AGG 0.656387 8_3:+1049029 Msa1268100:CDS
GCTTCACAGAGCATCAACCT+CGG 0.657044 8_3:+1052240 Msa1268100:CDS
TGATGTAGGTAAGATCCTGA+AGG 0.658649 8_3:+1050687 Msa1268100:CDS
AAACACAGAGATAAATACCA+AGG 0.669689 8_3:+1049089 Msa1268100:CDS
TCTTTCGAAACTGACTGCTG+AGG 0.670642 8_3:+1049307 Msa1268100:CDS
ACTGACTTCAGATACATCAT+CGG 0.676027 8_3:-1050488 None:intergenic
ATTATGGCGAAACTCGATTG+CGG 0.684534 8_3:+1049882 Msa1268100:CDS
ACTCTACAGAAATTTGGACA+TGG 0.687126 8_3:-1048960 None:intergenic
ACTGATGGATGACTTCCTAG+AGG 0.703699 8_3:+1050378 Msa1268100:CDS
GCTGAGTGTCAAAGGTTACG+TGG 0.710643 8_3:+1049785 Msa1268100:CDS
AGTGTTTGTAAAATGCAAAG+GGG 0.712425 8_3:-1052336 None:intergenic
GTCACAAAAGTTCTCCATGG+AGG 0.731979 8_3:+1051323 Msa1268100:CDS
GAAAAGCTATCAATCCCACG+GGG 0.825805 8_3:-1050607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAATAAAT+GGG - chr8_3:1047759-1047778 None:intergenic 0.0%
!! ATAATAATAATAATAATAAA+TGG - chr8_3:1047760-1047779 None:intergenic 0.0%
!!! TATTATTATTATTGTGTTTT+TGG + chr8_3:1047885-1047904 Msa1268100:intron 10.0%
!! GTTGAAAAATAAAATATATA+TGG + chr8_3:1048159-1048178 Msa1268100:intron 10.0%
!! ATAAAATATATTACCATTAA+AGG + chr8_3:1052905-1052924 Msa1268100:three_prime_UTR 10.0%
!! TAAAATATATTACCATTAAA+GGG + chr8_3:1052906-1052925 Msa1268100:three_prime_UTR 10.0%
!! TATTATATAATAGTAGTAGA+AGG + chr8_3:1047578-1047597 Msa1268100:five_prime_UTR 15.0%
!! TTAAAATTATTAATAGAAGG+AGG - chr8_3:1047844-1047863 None:intergenic 15.0%
!! GTACAATTATAGTAATTTAA+GGG + chr8_3:1048005-1048024 Msa1268100:intron 15.0%
!! TTTGGTTATTATAATCAAAT+GGG - chr8_3:1048032-1048051 None:intergenic 15.0%
!! ATTTGGTTATTATAATCAAA+TGG - chr8_3:1048033-1048052 None:intergenic 15.0%
!!! CTTGCTTTTTTTTTTTTATT+CGG + chr8_3:1048849-1048868 Msa1268100:intron 15.0%
!! TAAAAAAATTGCTAAATTAG+AGG + chr8_3:1049763-1049782 Msa1268100:CDS 15.0%
!!! TAAGAAATTCATTATCTTTT+TGG - chr8_3:1049982-1050001 None:intergenic 15.0%
!! TTCTTAGATTTCTATTTAAA+TGG - chr8_3:1052056-1052075 None:intergenic 15.0%
!! TCAATGTTTACAAATATAAA+GGG - chr8_3:1052762-1052781 None:intergenic 15.0%
!! AAAATATATTACCATTAAAG+GGG + chr8_3:1052907-1052926 Msa1268100:three_prime_UTR 15.0%
!! ATAATAATAATAAATGGGAG+AGG - chr8_3:1047754-1047773 None:intergenic 20.0%
!! GGTACAATTATAGTAATTTA+AGG + chr8_3:1048004-1048023 Msa1268100:intron 20.0%
!!! TTTCTCTTTTGTAATGAATA+TGG + chr8_3:1048199-1048218 Msa1268100:intron 20.0%
!!! TGAATTTTGGAAACATAAAA+GGG + chr8_3:1048230-1048249 Msa1268100:intron 20.0%
!!! AGATTCAAGTATTTTTCATT+TGG + chr8_3:1048569-1048588 Msa1268100:intron 20.0%
!! AAAAAAAAAAGCAAGACAAA+TGG - chr8_3:1048844-1048863 None:intergenic 20.0%
!!! TTTTTTTTTATTCGGCAATA+TGG + chr8_3:1048857-1048876 Msa1268100:intron 20.0%
!! ATTTAATATCCTTGGTTATA+AGG + chr8_3:1051113-1051132 Msa1268100:CDS 20.0%
!! TTTAATATCCTTGGTTATAA+GGG + chr8_3:1051114-1051133 Msa1268100:CDS 20.0%
!! TAATGAAATTCAGACTAAAA+AGG + chr8_3:1051984-1052003 Msa1268100:CDS 20.0%
!!! TGAATTATTTTCTTGATCAT+AGG + chr8_3:1052076-1052095 Msa1268100:intron 20.0%
!! GTCAATGTTTACAAATATAA+AGG - chr8_3:1052763-1052782 None:intergenic 20.0%
! TATAATAGTAGTAGAAGGTA+AGG + chr8_3:1047583-1047602 Msa1268100:five_prime_UTR 25.0%
!!! GATTTTTGGGAATTAGAATT+AGG - chr8_3:1047629-1047648 None:intergenic 25.0%
! AGAATGTGATTGTGATATTA+AGG - chr8_3:1047690-1047709 None:intergenic 25.0%
!!! GTGAATTTTGGAAACATAAA+AGG + chr8_3:1048229-1048248 Msa1268100:intron 25.0%
!!! TGTTTTTTTGTTGTTGTAGA+AGG + chr8_3:1048258-1048277 Msa1268100:intron 25.0%
! TGATACGTTGAATTTAATCA+CGG - chr8_3:1048469-1048488 None:intergenic 25.0%
! TTCATAGGGTATATGTTTAT+TGG + chr8_3:1048517-1048536 Msa1268100:intron 25.0%
! TTGGCATTTCATATAAGAAA+AGG + chr8_3:1048536-1048555 Msa1268100:intron 25.0%
! ATTTCATATAAGAAAAGGAC+TGG + chr8_3:1048541-1048560 Msa1268100:intron 25.0%
!! TTCTGCTTAATTTTTATGCA+TGG + chr8_3:1048600-1048619 Msa1268100:intron 25.0%
! CAAAACTTGAAATGTTAACA+AGG - chr8_3:1048626-1048645 None:intergenic 25.0%
!!! AAGTTTTGAAGAACAATTTC+TGG + chr8_3:1048638-1048657 Msa1268100:intron 25.0%
! TAATGTACTAATCATAAACC+CGG - chr8_3:1048726-1048745 None:intergenic 25.0%
! AATATGACTCTACAGAAATT+TGG - chr8_3:1048969-1048988 None:intergenic 25.0%
! ATTTGAACAGAACTTTAACT+CGG - chr8_3:1049222-1049241 None:intergenic 25.0%
!! ACTTAGCAAACTTCAAATTT+TGG + chr8_3:1050105-1050124 Msa1268100:CDS 25.0%
!! GTCTTATTGTTTGAAGTAAA+TGG - chr8_3:1050454-1050473 None:intergenic 25.0%
! GAATTCAGATTTAATATCCT+TGG + chr8_3:1051105-1051124 Msa1268100:CDS 25.0%
!!! TCTTGAACTAACTTATTTTC+AGG - chr8_3:1051189-1051208 None:intergenic 25.0%
! ACTTACACATGATATGATAT+TGG - chr8_3:1051708-1051727 None:intergenic 25.0%
! CTAATAGACAAAGTAACAAA+AGG - chr8_3:1051943-1051962 None:intergenic 25.0%
!!! CTTTTGTTACTTTGTCTATT+AGG + chr8_3:1051941-1051960 Msa1268100:intron 25.0%
! AAGTGTTTGTAAAATGCAAA+GGG - chr8_3:1052340-1052359 None:intergenic 25.0%
!! AAAGTGTTTGTAAAATGCAA+AGG - chr8_3:1052341-1052360 None:intergenic 25.0%
!! TTTTCATCAAAAGGAAAAAC+CGG + chr8_3:1052503-1052522 Msa1268100:CDS 25.0%
! AATTTCGTTAAATCATGAAG+GGG - chr8_3:1052618-1052637 None:intergenic 25.0%
! CAATTTCGTTAAATCATGAA+GGG - chr8_3:1052619-1052638 None:intergenic 25.0%
! TCAATTTCGTTAAATCATGA+AGG - chr8_3:1052620-1052639 None:intergenic 25.0%
! AAGGAAAAGAATACAACATA+TGG - chr8_3:1052729-1052748 None:intergenic 25.0%
! TATAAAGGGAAACAATGAAA+AGG - chr8_3:1052748-1052767 None:intergenic 25.0%
!!! TCTTTTAAAAGTTGTAACCA+TGG + chr8_3:1052859-1052878 Msa1268100:three_prime_UTR 25.0%
ATGTGATTGTGATATTAAGG+AGG - chr8_3:1047687-1047706 None:intergenic 30.0%
ATAATAATAAATGGGAGAGG+TGG - chr8_3:1047751-1047770 None:intergenic 30.0%
TTGGATGATGATATAAAGAG+AGG + chr8_3:1047904-1047923 Msa1268100:intron 30.0%
TTAGATCTTGAAGATCACAT+TGG + chr8_3:1047939-1047958 Msa1268100:intron 30.0%
AGAAATGATTACATGCACTA+AGG - chr8_3:1048139-1048158 None:intergenic 30.0%
ATTGTGATTTGAGTGAGATA+TGG + chr8_3:1048289-1048308 Msa1268100:exon 30.0%
!!! TCAGATGATTTTTTCTTCCA+AGG - chr8_3:1048326-1048345 None:intergenic 30.0%
TACAAAGCATATACCTGTTT+GGG - chr8_3:1048407-1048426 None:intergenic 30.0%
!! AGTTTCTTACTTTTCTGCTA+TGG + chr8_3:1048686-1048705 Msa1268100:intron 30.0%
!!! TATGGCCTTTTTTTTAATCC+CGG + chr8_3:1048704-1048723 Msa1268100:intron 30.0%
TAAACCCGGGATTAAAAAAA+AGG - chr8_3:1048712-1048731 None:intergenic 30.0%
AATGTACTAATCATAAACCC+GGG - chr8_3:1048725-1048744 None:intergenic 30.0%
ATTATGAAGCATACTAGATG+CGG + chr8_3:1048742-1048761 Msa1268100:intron 30.0%
TTTAGATATGTGTTTGTGTG+TGG + chr8_3:1048771-1048790 Msa1268100:intron 30.0%
TTAGATATGTGTTTGTGTGT+GGG + chr8_3:1048772-1048791 Msa1268100:intron 30.0%
! AGACAAATGGAGTATTAGTT+AGG - chr8_3:1048831-1048850 None:intergenic 30.0%
AGTGAAGACATATGAAGAAA+AGG + chr8_3:1049014-1049033 Msa1268100:CDS 30.0%
AAACACAGAGATAAATACCA+AGG + chr8_3:1049089-1049108 Msa1268100:CDS 30.0%
AAAGGAAACACTATACATCA+AGG - chr8_3:1049191-1049210 None:intergenic 30.0%
TTTAACTCGGGAAACAAAAA+AGG - chr8_3:1049209-1049228 None:intergenic 30.0%
TTTGAACAGAACTTTAACTC+GGG - chr8_3:1049221-1049240 None:intergenic 30.0%
AGAACATGAACTGAAAATAC+AGG + chr8_3:1049394-1049413 Msa1268100:CDS 30.0%
AAGCAATTGGACAAGATTAA+GGG + chr8_3:1049437-1049456 Msa1268100:CDS 30.0%
TTCTCTTTCACATGATTCTA+CGG - chr8_3:1049624-1049643 None:intergenic 30.0%
AAGAAAAGAACATGAGTATG+AGG + chr8_3:1049702-1049721 Msa1268100:CDS 30.0%
GAATTTCTGTATATTCTCGA+GGG - chr8_3:1049960-1049979 None:intergenic 30.0%
!!! TTGAAGTTTGCTAAGTGTTT+TGG - chr8_3:1050101-1050120 None:intergenic 30.0%
ATATGCTTTCATGGTTCATA+TGG - chr8_3:1050183-1050202 None:intergenic 30.0%
ATCATTACCATCTTCAGAAA+TGG - chr8_3:1050242-1050261 None:intergenic 30.0%
!! ATTCTTTTCTTTTGGGAGTT+GGG - chr8_3:1050317-1050336 None:intergenic 30.0%
! TTCAAATCACTCTTCTTTTC+AGG - chr8_3:1050538-1050557 None:intergenic 30.0%
GAACATGTTTAATATCCTTC+AGG - chr8_3:1050705-1050724 None:intergenic 30.0%
TGATACTCCATGTGATAAAA+AGG + chr8_3:1050792-1050811 Msa1268100:CDS 30.0%
GTTCATGATATATCTTCTGA+TGG + chr8_3:1050964-1050983 Msa1268100:CDS 30.0%
!! AACTAACTTATTTTCAGGCA+GGG - chr8_3:1051184-1051203 None:intergenic 30.0%
GTTAGTTCAAGAAAATTCGT+CGG + chr8_3:1051197-1051216 Msa1268100:CDS 30.0%
TTAGTTCAAGAAAATTCGTC+GGG + chr8_3:1051198-1051217 Msa1268100:CDS 30.0%
ATTGAGATTAGAGAAAGAGA+AGG + chr8_3:1051356-1051375 Msa1268100:CDS 30.0%
AGCTGAAGTTAAATCACAAT+TGG + chr8_3:1051455-1051474 Msa1268100:CDS 30.0%
CATAGTAAGTTAATGTTAGC+AGG - chr8_3:1051854-1051873 None:intergenic 30.0%
GGAGGAATTAGAAATAGAAT+TGG - chr8_3:1051922-1051941 None:intergenic 30.0%
ATAGACAAAGTAACAAAAGG+AGG - chr8_3:1051940-1051959 None:intergenic 30.0%
GCTTTCTATTTGAATGGAAT+CGG - chr8_3:1052017-1052036 None:intergenic 30.0%
!!! CTAGTTTTGGTTTTATGCAA+AGG + chr8_3:1052300-1052319 Msa1268100:CDS 30.0%
AGTGTTTGTAAAATGCAAAG+GGG - chr8_3:1052339-1052358 None:intergenic 30.0%
AAGTTTGAGTCATTATCTGA+TGG - chr8_3:1052371-1052390 None:intergenic 30.0%
AAAAGAATCTGCTAAAACCT+CGG - chr8_3:1052487-1052506 None:intergenic 30.0%
! AGCAGATTCTTTTCATCAAA+AGG + chr8_3:1052494-1052513 Msa1268100:CDS 30.0%
ATTTAACGAAATTGAGCTTG+TGG + chr8_3:1052625-1052644 Msa1268100:three_prime_UTR 30.0%
TTTAACGAAATTGAGCTTGT+GGG + chr8_3:1052626-1052645 Msa1268100:three_prime_UTR 30.0%
ATATCATTACCAGACATTCA+TGG - chr8_3:1052679-1052698 None:intergenic 30.0%
CTTGTATCTAATGTTGTACA+TGG + chr8_3:1052700-1052719 Msa1268100:three_prime_UTR 30.0%
CTTTCCTTTAACAATGACTA+TGG + chr8_3:1052836-1052855 Msa1268100:three_prime_UTR 30.0%
AAGACCATAGTCATTGTTAA+AGG - chr8_3:1052843-1052862 None:intergenic 30.0%
! AAATCTGTCATTTATGACCA+TGG - chr8_3:1052879-1052898 None:intergenic 30.0%
! GGTGGCTAAGAAAGATTTTT+GGG - chr8_3:1047642-1047661 None:intergenic 35.0%
! TGGTGGCTAAGAAAGATTTT+TGG - chr8_3:1047643-1047662 None:intergenic 35.0%
TGATTGTGATATTAAGGAGG+AGG - chr8_3:1047684-1047703 None:intergenic 35.0%
GAGAAGAAGAGAGAGTAAAA+TGG - chr8_3:1047822-1047841 None:intergenic 35.0%
AAACAGAGAAGGGTAGAATT+TGG - chr8_3:1048050-1048069 None:intergenic 35.0%
GAAATGCAACAAACAGAGAA+GGG - chr8_3:1048060-1048079 None:intergenic 35.0%
TGAAATGCAACAAACAGAGA+AGG - chr8_3:1048061-1048080 None:intergenic 35.0%
! TATGGCATGTGTGTGAATTT+TGG + chr8_3:1048217-1048236 Msa1268100:intron 35.0%
AGTGAGATATGGATAGAAGA+TGG + chr8_3:1048300-1048319 Msa1268100:exon 35.0%
CTACAAAGCATATACCTGTT+TGG - chr8_3:1048408-1048427 None:intergenic 35.0%
TCGACACTTCTAATAGTGTT+CGG + chr8_3:1048430-1048449 Msa1268100:intron 35.0%
!!! ATGGCCTTTTTTTTAATCCC+GGG + chr8_3:1048705-1048724 Msa1268100:intron 35.0%
TTATGAAGCATACTAGATGC+GGG + chr8_3:1048743-1048762 Msa1268100:intron 35.0%
GGGATTTGAACTTGCATAAT+TGG + chr8_3:1048792-1048811 Msa1268100:intron 35.0%
ACAGAAATTTGGACATGGTT+CGG - chr8_3:1048958-1048977 None:intergenic 35.0%
ACTCTACAGAAATTTGGACA+TGG - chr8_3:1048963-1048982 None:intergenic 35.0%
GATAAATACCAAGGAAGCTT+TGG + chr8_3:1049098-1049117 Msa1268100:CDS 35.0%
!! TTGTTTTACCAAAGCTTCCT+TGG - chr8_3:1049109-1049128 None:intergenic 35.0%
AAGTTCTGTTCAAATTCTCC+AGG + chr8_3:1049227-1049246 Msa1268100:intron 35.0%
TCAGTTCATGTTCTTCTTTC+AGG - chr8_3:1049388-1049407 None:intergenic 35.0%
!! CAATTGCTTGGTTTTTGCAA+GGG - chr8_3:1049426-1049445 None:intergenic 35.0%
CTTAATCTTGTCCAATTGCT+TGG - chr8_3:1049438-1049457 None:intergenic 35.0%
CAAGCAATTGGACAAGATTA+AGG + chr8_3:1049436-1049455 Msa1268100:CDS 35.0%
ATTGCGAATTTCAAGCTCTT+TGG - chr8_3:1049681-1049700 None:intergenic 35.0%
GGAATTTCTGTATATTCTCG+AGG - chr8_3:1049961-1049980 None:intergenic 35.0%
!! CTTCAAATTTTGGAAGCACA+AGG + chr8_3:1050115-1050134 Msa1268100:CDS 35.0%
! TTCATATGGATGGGAGATTT+TGG - chr8_3:1050169-1050188 None:intergenic 35.0%
CTTTCATGGTTCATATGGAT+GGG - chr8_3:1050178-1050197 None:intergenic 35.0%
TTTGGCTGTATATGCTTTCA+TGG - chr8_3:1050192-1050211 None:intergenic 35.0%
AGCATATACAGCCAAAATAC+AGG + chr8_3:1050196-1050215 Msa1268100:CDS 35.0%
! ATGATCTCCATTTCTGAAGA+TGG + chr8_3:1050232-1050251 Msa1268100:CDS 35.0%
!! CATTCTTTTCTTTTGGGAGT+TGG - chr8_3:1050318-1050337 None:intergenic 35.0%
! CGTCAGCATTCTTTTCTTTT+GGG - chr8_3:1050324-1050343 None:intergenic 35.0%
! TCGTCAGCATTCTTTTCTTT+TGG - chr8_3:1050325-1050344 None:intergenic 35.0%
AGAAAAGAATGCTGACGAAT+TGG + chr8_3:1050327-1050346 Msa1268100:CDS 35.0%
GAAAAGAATGCTGACGAATT+GGG + chr8_3:1050328-1050347 Msa1268100:CDS 35.0%
GACTAAGAAGTTAGAACTGA+TGG + chr8_3:1050363-1050382 Msa1268100:CDS 35.0%
! GTTTGAAGTAAATGGCAAAG+AGG - chr8_3:1050446-1050465 None:intergenic 35.0%
! ACTGACTTCAGATACATCAT+CGG - chr8_3:1050491-1050510 None:intergenic 35.0%
ATTCTTGATTGAAGATCTGC+TGG - chr8_3:1050634-1050653 None:intergenic 35.0%
ACTGTCAGTGTTTGAATCTA+TGG + chr8_3:1050654-1050673 Msa1268100:CDS 35.0%
AGTGTTTGAATCTATGGCTA+AGG + chr8_3:1050660-1050679 Msa1268100:CDS 35.0%
! GGATCATCCTTTTTATCACA+TGG - chr8_3:1050802-1050821 None:intergenic 35.0%
! AAGGATGATCCTGAAGATTT+TGG + chr8_3:1050811-1050830 Msa1268100:CDS 35.0%
GAAACTGAACCAAAATCTTC+AGG - chr8_3:1050823-1050842 None:intergenic 35.0%
GATATATCTTCTGATGGAGA+TGG + chr8_3:1050970-1050989 Msa1268100:CDS 35.0%
AGATGGTATAAGCCAAAAGA+TGG + chr8_3:1050987-1051006 Msa1268100:CDS 35.0%
TCTTGATCTGTCTCATTTCT+TGG + chr8_3:1051071-1051090 Msa1268100:CDS 35.0%
TATCCTTGGTTATAAGGGTA+TGG + chr8_3:1051119-1051138 Msa1268100:CDS 35.0%
TTTCCATACCCTTATAACCA+AGG - chr8_3:1051125-1051144 None:intergenic 35.0%
GCAATCTTATCTATGCAATC+AGG - chr8_3:1051162-1051181 None:intergenic 35.0%
!! GAACTAACTTATTTTCAGGC+AGG - chr8_3:1051185-1051204 None:intergenic 35.0%
GATGTCAAATTTCCATCATC+AGG - chr8_3:1051282-1051301 None:intergenic 35.0%
TTTCTGTCTTCATTCGTAGA+TGG - chr8_3:1051587-1051606 None:intergenic 35.0%
AGCTAGAAGAACAATTGCAA+AGG + chr8_3:1051670-1051689 Msa1268100:CDS 35.0%
TAAATTCCACTGTTGTGAAC+AGG - chr8_3:1051774-1051793 None:intergenic 35.0%
CACAACAGTGGAATTTATGT+TGG + chr8_3:1051777-1051796 Msa1268100:intron 35.0%
TGGTTTGAGTAAGAAAACGT+AGG + chr8_3:1051797-1051816 Msa1268100:intron 35.0%
TTCTATTTGAATGGAATCGG+TGG - chr8_3:1052014-1052033 None:intergenic 35.0%
TTCCATTCAAATAGAAAGCC+AGG + chr8_3:1052018-1052037 Msa1268100:intron 35.0%
AAATGGAATTAAATCCAGCC+TGG - chr8_3:1052039-1052058 None:intergenic 35.0%
ATATATGGTTTCCTGACACT+CGG - chr8_3:1052135-1052154 None:intergenic 35.0%
CAGGAAACCATATATCTTCT+TGG + chr8_3:1052140-1052159 Msa1268100:CDS 35.0%
!!! TTTTGGTTTTATGCAAAGGC+AGG + chr8_3:1052304-1052323 Msa1268100:CDS 35.0%
!!! TTTGGTTTTATGCAAAGGCA+GGG + chr8_3:1052305-1052324 Msa1268100:CDS 35.0%
CTCATATCATGAATCTTCAC+TGG - chr8_3:1052555-1052574 None:intergenic 35.0%
CAGTGAAGATTCATGATATG+AGG + chr8_3:1052553-1052572 Msa1268100:three_prime_UTR 35.0%
ATTCATGATATGAGGCTACA+CGG + chr8_3:1052561-1052580 Msa1268100:three_prime_UTR 35.0%
GATTGTGTAGTTAAAGGAGA+GGG + chr8_3:1052651-1052670 Msa1268100:three_prime_UTR 35.0%
!! GACAGTCTCTGAAATATTAC+AGG + chr8_3:1052780-1052799 Msa1268100:three_prime_UTR 35.0%
ATATTACCATTAAAGGGGTG+CGG + chr8_3:1052912-1052931 Msa1268100:three_prime_UTR 35.0%
TTGTGATATTAAGGAGGAGG+TGG - chr8_3:1047681-1047700 None:intergenic 40.0%
ATAAATGGGAGAGGTGGTTT+GGG - chr8_3:1047745-1047764 None:intergenic 40.0%
AATAAATGGGAGAGGTGGTT+TGG - chr8_3:1047746-1047765 None:intergenic 40.0%
GTCTCACACTTTGAATGCAT+TGG + chr8_3:1047983-1048002 Msa1268100:intron 40.0%
TGCACTAAGGTGAATAGTGT+CGG - chr8_3:1048126-1048145 None:intergenic 40.0%
ATATGGATAGAAGATGGCCT+TGG + chr8_3:1048306-1048325 Msa1268100:exon 40.0%
TGAGAAAGTTGCTGCTGAAT+TGG + chr8_3:1048358-1048377 Msa1268100:CDS 40.0%
TGCATCTAATCAACCCAAAC+AGG + chr8_3:1048391-1048410 Msa1268100:CDS 40.0%
CAACGTATCAGTGTTATGTC+CGG + chr8_3:1048479-1048498 Msa1268100:intron 40.0%
TGTCTGTGTCAATGCTTCAT+AGG + chr8_3:1048502-1048521 Msa1268100:intron 40.0%
GTCTGTGTCAATGCTTCATA+GGG + chr8_3:1048503-1048522 Msa1268100:intron 40.0%
!! TTGCTTTTGCTTATGCAAGC+AGG + chr8_3:1048918-1048937 Msa1268100:intron 40.0%
AGAGTCATATTCACGTCTGA+CGG + chr8_3:1048978-1048997 Msa1268100:CDS 40.0%
AGAAAAGGTTCAGACACTTG+AGG + chr8_3:1049029-1049048 Msa1268100:CDS 40.0%
ACATGCTAAAGTAGCTGAAG+AGG + chr8_3:1049128-1049147 Msa1268100:CDS 40.0%
!! CCAATTGCTTGGTTTTTGCA+AGG - chr8_3:1049427-1049446 None:intergenic 40.0%
CCTTGCAAAAACCAAGCAAT+TGG + chr8_3:1049424-1049443 Msa1268100:CDS 40.0%
CAAGATTAAGGGTGATCTTG+AGG + chr8_3:1049448-1049467 Msa1268100:CDS 40.0%
TAGGATACGGAACTTTGAAC+AGG + chr8_3:1049472-1049491 Msa1268100:CDS 40.0%
ACTTTGAACAGGAACTTCTC+AGG + chr8_3:1049483-1049502 Msa1268100:CDS 40.0%
TGAAGAAAAAGCTCATGCTG+AGG + chr8_3:1049574-1049593 Msa1268100:CDS 40.0%
AATTAGAGGCTGAGTGTCAA+AGG + chr8_3:1049777-1049796 Msa1268100:CDS 40.0%
AAAGGTTACGTGGTCTAGTA+CGG + chr8_3:1049795-1049814 Msa1268100:CDS 40.0%
CTAGTACGGAAAAAGTTACC+TGG + chr8_3:1049809-1049828 Msa1268100:CDS 40.0%
AAGCTGGAAGTTGAAAGTCT+TGG + chr8_3:1049854-1049873 Msa1268100:CDS 40.0%
ATCGAGTTTCGCCATAATCT+CGG - chr8_3:1049880-1049899 None:intergenic 40.0%
ATTATGGCGAAACTCGATTG+CGG + chr8_3:1049882-1049901 Msa1268100:CDS 40.0%
TGAGGACTAGAAGGTTTAAC+AGG - chr8_3:1049914-1049933 None:intergenic 40.0%
TTCTAGTCCTCATTTCTCTC+CGG + chr8_3:1049922-1049941 Msa1268100:CDS 40.0%
ATATTCTCGAGGGAGAAATC+AGG - chr8_3:1049950-1049969 None:intergenic 40.0%
! TACAGAGCGCTTATTGACAA+TGG + chr8_3:1050000-1050019 Msa1268100:CDS 40.0%
AAAACGTAACAGCGAATTGC+AGG + chr8_3:1050057-1050076 Msa1268100:CDS 40.0%
CAGACAAGTAATCAGCAGAA+GGG + chr8_3:1050139-1050158 Msa1268100:CDS 40.0%
GCTTTCATGGTTCATATGGA+TGG - chr8_3:1050179-1050198 None:intergenic 40.0%
! TTGCTGCATAGCCTGTATTT+TGG - chr8_3:1050210-1050229 None:intergenic 40.0%
CTCGGATATATCATCTTTGC+TGG - chr8_3:1050515-1050534 None:intergenic 40.0%
!! ATCACTCTTCTTTTCAGGCT+CGG - chr8_3:1050533-1050552 None:intergenic 40.0%
TGAAAAGCTATCAATCCCAC+GGG - chr8_3:1050611-1050630 None:intergenic 40.0%
GTGAAAAGCTATCAATCCCA+CGG - chr8_3:1050612-1050631 None:intergenic 40.0%
TGATGTAGGTAAGATCCTGA+AGG + chr8_3:1050687-1050706 Msa1268100:CDS 40.0%
GAATTTCAGCTACAGAGTCT+TGG - chr8_3:1050753-1050772 None:intergenic 40.0%
CATACACTCAGAAGGTTCTT+GGG - chr8_3:1050866-1050885 None:intergenic 40.0%
GTTATCTGCATACACTCAGA+AGG - chr8_3:1050874-1050893 None:intergenic 40.0%
TGGTATAAGCCAAAAGATGG+AGG + chr8_3:1050990-1051009 Msa1268100:CDS 40.0%
! CAGAAAACTCCTCCATCTTT+TGG - chr8_3:1051002-1051021 None:intergenic 40.0%
! ACTGTAGCAAACTTGCTTCA+TGG - chr8_3:1051047-1051066 None:intergenic 40.0%
TCGGGAGAGAGATATCAAAA+TGG + chr8_3:1051216-1051235 Msa1268100:CDS 40.0%
AGAGAAAGAGAAGGCAATTG+TGG + chr8_3:1051365-1051384 Msa1268100:CDS 40.0%
AACTTCAGCTAGAAGTTGCT+CGG - chr8_3:1051445-1051464 None:intergenic 40.0%
!! CATGCATTTGAGTTGAGTCT+CGG - chr8_3:1051508-1051527 None:intergenic 40.0%
! AGCCTGGCTTTCTATTTGAA+TGG - chr8_3:1052023-1052042 None:intergenic 40.0%
ATTCAAATAGAAAGCCAGGC+TGG + chr8_3:1052022-1052041 Msa1268100:intron 40.0%
TTGATCATAGGAGAGAGACT+TGG + chr8_3:1052088-1052107 Msa1268100:intron 40.0%
CTGCTTGCCAAGAAGATATA+TGG - chr8_3:1052150-1052169 None:intergenic 40.0%
CATCCTCAAACAGAACCAAT+GGG + chr8_3:1052182-1052201 Msa1268100:CDS 40.0%
TCACTGTACATAGATCCCAT+TGG - chr8_3:1052200-1052219 None:intergenic 40.0%
! GTACAGTGAGAAGCTTTTGA+AGG + chr8_3:1052211-1052230 Msa1268100:CDS 40.0%
!! GAGAAGCTTTTGAAGGTTGA+AGG + chr8_3:1052218-1052237 Msa1268100:CDS 40.0%
! TTGTGATTTGGATGGTGTAC+AGG - chr8_3:1052407-1052426 None:intergenic 40.0%
! TTGTAGGCTTGTGATTTGGA+TGG - chr8_3:1052415-1052434 None:intergenic 40.0%
GACTTTGTAGGCTTGTGATT+TGG - chr8_3:1052419-1052438 None:intergenic 40.0%
GGCTACACGGTAATGATATT+TGG + chr8_3:1052574-1052593 Msa1268100:three_prime_UTR 40.0%
AATGATATTTGGACAGCACC+AGG + chr8_3:1052585-1052604 Msa1268100:three_prime_UTR 40.0%
TGGGAGGATTGTGTAGTTAA+AGG + chr8_3:1052645-1052664 Msa1268100:three_prime_UTR 40.0%
GGATTGTGTAGTTAAAGGAG+AGG + chr8_3:1052650-1052669 Msa1268100:three_prime_UTR 40.0%
TAATAACCGCACCCCTTTAA+TGG - chr8_3:1052921-1052940 None:intergenic 40.0%
TATTAAGGAGGAGGTGGTAG+TGG - chr8_3:1047675-1047694 None:intergenic 45.0%
! GAGAGGTGGTTTGGGTTTAA+GGG - chr8_3:1047737-1047756 None:intergenic 45.0%
! ACTAAGGTGAATAGTGTCGG+CGG - chr8_3:1048123-1048142 None:intergenic 45.0%
!! TGAAGCATTGACACAGACAC+CGG - chr8_3:1048501-1048520 None:intergenic 45.0%
GAGTCATATTCACGTCTGAC+GGG + chr8_3:1048979-1048998 Msa1268100:CDS 45.0%
!! ATATTCACGTCTGACGGGTT+TGG + chr8_3:1048984-1049003 Msa1268100:CDS 45.0%
TCTGTTCAAATTCTCCAGGC+TGG + chr8_3:1049231-1049250 Msa1268100:intron 45.0%
CTGTTCAAATTCTCCAGGCT+GGG + chr8_3:1049232-1049251 Msa1268100:intron 45.0%
AAATTCTCCAGGCTGGGAAA+AGG + chr8_3:1049238-1049257 Msa1268100:intron 45.0%
AAAGGCAGAAGCAGAAGCTT+TGG + chr8_3:1049256-1049275 Msa1268100:CDS 45.0%
TCTTTCGAAACTGACTGCTG+AGG + chr8_3:1049307-1049326 Msa1268100:CDS 45.0%
TTAAGGGTGATCTTGAGGCT+AGG + chr8_3:1049453-1049472 Msa1268100:CDS 45.0%
GTGATCTTGAGGCTAGGATA+CGG + chr8_3:1049459-1049478 Msa1268100:CDS 45.0%
AGCTGCTAACAAGCAGCATA+TGG + chr8_3:1049733-1049752 Msa1268100:CDS 45.0%
TGCTAACAAGCAGCATATGG+AGG + chr8_3:1049736-1049755 Msa1268100:CDS 45.0%
GCTAACAAGCAGCATATGGA+GGG + chr8_3:1049737-1049756 Msa1268100:CDS 45.0%
TTCATTTGTGCAAGTGCAGC+AGG - chr8_3:1049836-1049855 None:intergenic 45.0%
TGCACTTGCACAAATGAAGC+TGG + chr8_3:1049838-1049857 Msa1268100:CDS 45.0%
GAAAGTCTTGGCCGAGATTA+TGG + chr8_3:1049866-1049885 Msa1268100:CDS 45.0%
GGAGAGAAATGAGGACTAGA+AGG - chr8_3:1049923-1049942 None:intergenic 45.0%
! CCTTCTGCTGATTACTTGTC+TGG - chr8_3:1050141-1050160 None:intergenic 45.0%
CCAGACAAGTAATCAGCAGA+AGG + chr8_3:1050138-1050157 Msa1268100:CDS 45.0%
TATTGCTGTCGACCAAGACT+CGG - chr8_3:1050281-1050300 None:intergenic 45.0%
TGACGAATTGGGCAAATCTG+AGG + chr8_3:1050339-1050358 Msa1268100:CDS 45.0%
! ACTGATGGATGACTTCCTAG+AGG + chr8_3:1050378-1050397 Msa1268100:CDS 45.0%
CAGCAAATTTCTCCACCTCT+AGG - chr8_3:1050396-1050415 None:intergenic 45.0%
CTAGAGGTGGAGAAATTTGC+TGG + chr8_3:1050394-1050413 Msa1268100:CDS 45.0%
GAAAAGCTATCAATCCCACG+GGG - chr8_3:1050610-1050629 None:intergenic 45.0%
ATGGCTAAGGATGCTGATGT+AGG + chr8_3:1050673-1050692 Msa1268100:CDS 45.0%
TTCAGCTACAGAGTCTTGGA+TGG - chr8_3:1050749-1050768 None:intergenic 45.0%
! TCACATGGAGTATCAGAAGC+TGG - chr8_3:1050787-1050806 None:intergenic 45.0%
GCATACACTCAGAAGGTTCT+TGG - chr8_3:1050867-1050886 None:intergenic 45.0%
AATCCTGAGGTTCCTGATGA+TGG + chr8_3:1051267-1051286 Msa1268100:CDS 45.0%
TTTCCATCATCAGGAACCTC+AGG - chr8_3:1051273-1051292 None:intergenic 45.0%
CACGTCACAAAAGTTCTCCA+TGG + chr8_3:1051320-1051339 Msa1268100:CDS 45.0%
GTCACAAAAGTTCTCCATGG+AGG + chr8_3:1051323-1051342 Msa1268100:CDS 45.0%
CAATTCCTCAAAGTCCTCCA+TGG - chr8_3:1051340-1051359 None:intergenic 45.0%
! CACAATTGGCTTCTGCTCAA+AGG + chr8_3:1051469-1051488 Msa1268100:CDS 45.0%
CGAGACTCAACTCAAATGCA+TGG + chr8_3:1051506-1051525 Msa1268100:CDS 45.0%
ATCACTTGAAACACGTGCAC+AGG + chr8_3:1051542-1051561 Msa1268100:CDS 45.0%
GAGATCTCATGAAGCAGCTT+TGG + chr8_3:1051635-1051654 Msa1268100:CDS 45.0%
CATAATCCATTCCTACTCGC+AGG + chr8_3:1051748-1051767 Msa1268100:intron 45.0%
TGAAAAGTTAGCCGAGTGTC+AGG + chr8_3:1052121-1052140 Msa1268100:CDS 45.0%
GCATCCTCAAACAGAACCAA+TGG + chr8_3:1052181-1052200 Msa1268100:CDS 45.0%
!! GATCCCATTGGTTCTGTTTG+AGG - chr8_3:1052188-1052207 None:intergenic 45.0%
CCACCTGATCCTGCAAATTT+GGG - chr8_3:1052268-1052287 None:intergenic 45.0%
TCCACCTGATCCTGCAAATT+TGG - chr8_3:1052269-1052288 None:intergenic 45.0%
TGGATGGTGTACAGGAGATA+TGG - chr8_3:1052399-1052418 None:intergenic 45.0%
! GATGAAGAGGCTGACTTTGT+AGG - chr8_3:1052431-1052450 None:intergenic 45.0%
AGTGGAAGAAGCTGATGAAG+AGG - chr8_3:1052444-1052463 None:intergenic 45.0%
! ATGTTTTTCCGGTGTAGGAG+TGG - chr8_3:1052462-1052481 None:intergenic 45.0%
ACTCCTACACCGGAAAAACA+TGG + chr8_3:1052461-1052480 Msa1268100:CDS 45.0%
! AAACCTCGGCCATGTTTTTC+CGG - chr8_3:1052473-1052492 None:intergenic 45.0%
! AACCGGTCATTGAGCTTTTG+CGG + chr8_3:1052520-1052539 Msa1268100:exon 45.0%
! ATTGAGCTTTTGCGGCATAC+AGG + chr8_3:1052528-1052547 Msa1268100:exon 45.0%
AACGAAATTGAGCTTGTGGG+AGG + chr8_3:1052629-1052648 Msa1268100:three_prime_UTR 45.0%
!! TAATTAAAATTATTAATAGA+AGG - chr8_3:1047847-1047866 None:intergenic 5.0%
! GGAGAGGTGGTTTGGGTTTA+AGG - chr8_3:1047738-1047757 None:intergenic 50.0%
GAAACTGACTGCTGAGGATC+AGG + chr8_3:1049313-1049332 Msa1268100:CDS 50.0%
GATCAGGCGTCACAGTTAGA+CGG + chr8_3:1049329-1049348 Msa1268100:CDS 50.0%
! CAGGTCTGCTGCTGATAATG+CGG + chr8_3:1049502-1049521 Msa1268100:CDS 50.0%
! CTGATAATGCGGCTCTGTCT+AGG + chr8_3:1049513-1049532 Msa1268100:CDS 50.0%
GCTGAGTGTCAAAGGTTACG+TGG + chr8_3:1049785-1049804 Msa1268100:CDS 50.0%
GATGGATGACTTCCTAGAGG+TGG + chr8_3:1050381-1050400 Msa1268100:CDS 50.0%
ATCAGAAGCTGGCACATCGA+CGG - chr8_3:1050776-1050795 None:intergenic 50.0%
! CACGACTTCGTGTTGTTCCT+TGG + chr8_3:1050925-1050944 Msa1268100:CDS 50.0%
CTGTCATTGCTTCTCTGCCA+AGG - chr8_3:1050945-1050964 None:intergenic 50.0%
CAATCCCTGCTCTAATCCTG+AGG + chr8_3:1051254-1051273 Msa1268100:CDS 50.0%
GGAACCTCAGGATTAGAGCA+GGG - chr8_3:1051261-1051280 None:intergenic 50.0%
AGGAACCTCAGGATTAGAGC+AGG - chr8_3:1051262-1051281 None:intergenic 50.0%
GTTCTCCATGGAGGACTTTG+AGG + chr8_3:1051332-1051351 Msa1268100:CDS 50.0%
! AGCAGCTTTGGCAAAGTGCA+AGG + chr8_3:1051647-1051666 Msa1268100:CDS 50.0%
! GCTTCACAGAGCATCAACCT+CGG + chr8_3:1052240-1052259 Msa1268100:CDS 50.0%
GAGCCCAAATTTGCAGGATC+AGG + chr8_3:1052262-1052281 Msa1268100:CDS 50.0%
CCCAAATTTGCAGGATCAGG+TGG + chr8_3:1052265-1052284 Msa1268100:CDS 50.0%
TTTGCAGGATCAGGTGGAGA+TGG + chr8_3:1052271-1052290 Msa1268100:CDS 50.0%
!! GAGATGGACGGAGCTAGTTT+TGG + chr8_3:1052287-1052306 Msa1268100:CDS 50.0%
AGCTTCTTCCACTCCTACAC+CGG + chr8_3:1052451-1052470 Msa1268100:CDS 50.0%
TGCCGCAAAAGCTCAATGAC+CGG - chr8_3:1052525-1052544 None:intergenic 50.0%
!! GGTAGTGGTAGTGGTAGTGG+TGG - chr8_3:1047660-1047679 None:intergenic 55.0%
!! GGTGGTAGTGGTAGTGGTAG+TGG - chr8_3:1047663-1047682 None:intergenic 55.0%
!! AAGGTGAATAGTGTCGGCGG+TGG - chr8_3:1048120-1048139 None:intergenic 55.0%
GCTGCTGAATTGGACTCTGC+TGG + chr8_3:1048368-1048387 Msa1268100:CDS 55.0%
!! TTCACGTCTGACGGGTTTGG+AGG + chr8_3:1048987-1049006 Msa1268100:CDS 55.0%
GTAGCTGAAGAGGCTGTCTC+AGG + chr8_3:1049138-1049157 Msa1268100:CDS 55.0%
! CATGTTAGAGCGCTCCTGCA+AGG - chr8_3:1049540-1049559 None:intergenic 55.0%
!! TCAGGCACCGGAGAGAAATG+AGG - chr8_3:1049932-1049951 None:intergenic 55.0%
TCGAGGGAGAAATCAGGCAC+CGG - chr8_3:1049944-1049963 None:intergenic 55.0%
CGAGAAGTTGTGCCGAGTCT+TGG + chr8_3:1050266-1050285 Msa1268100:CDS 55.0%
!! GGAGACGCTTGGCTTTGCAA+TGG - chr8_3:1050562-1050581 None:intergenic 55.0%
TATCAATCCCACGGGGACTG+GGG - chr8_3:1050603-1050622 None:intergenic 55.0%
CTATCAATCCCACGGGGACT+GGG - chr8_3:1050604-1050623 None:intergenic 55.0%
TCAGAAGCTGGCACATCGAC+GGG - chr8_3:1050775-1050794 None:intergenic 55.0%
AACAGGCCTGCGAGTAGGAA+TGG - chr8_3:1051757-1051776 None:intergenic 55.0%
TTGTGAACAGGCCTGCGAGT+AGG - chr8_3:1051762-1051781 None:intergenic 55.0%
ACCTCGGAGCCCAAATTTGC+AGG + chr8_3:1052256-1052275 Msa1268100:CDS 55.0%
TCCTGCAAATTTGGGCTCCG+AGG - chr8_3:1052260-1052279 None:intergenic 55.0%
CAGGATCAGGTGGAGATGGA+CGG + chr8_3:1052275-1052294 Msa1268100:CDS 55.0%
! CGGCCATGTTTTTCCGGTGT+AGG - chr8_3:1052467-1052486 None:intergenic 55.0%
ACACCGGAAAAACATGGCCG+AGG + chr8_3:1052467-1052486 Msa1268100:CDS 55.0%
TCATGAAGGGGTTCGCAACC+TGG - chr8_3:1052606-1052625 None:intergenic 55.0%
!! GAGAGGGTGCCATGAATGTC+TGG + chr8_3:1052667-1052686 Msa1268100:three_prime_UTR 55.0%
!! GGAGGAGGTGGTAGTGGTAG+TGG - chr8_3:1047669-1047688 None:intergenic 60.0%
! GCTTCTGCCTTTTCCCAGCC+TGG - chr8_3:1049248-1049267 None:intergenic 60.0%
GGCTCTGTCTAGGTCCTTGC+AGG + chr8_3:1049523-1049542 Msa1268100:CDS 60.0%
TGTGCAAGTGCAGCAGGACC+AGG - chr8_3:1049830-1049849 None:intergenic 60.0%
ATCCTGCAGCAGGAGACGCT+TGG - chr8_3:1050573-1050592 None:intergenic 60.0%
ATCAATCCCACGGGGACTGG+GGG - chr8_3:1050602-1050621 None:intergenic 60.0%
GCTATCAATCCCACGGGGAC+TGG - chr8_3:1050605-1050624 None:intergenic 60.0%
CGCAGGCCTGTTCACAACAG+TGG + chr8_3:1051765-1051784 Msa1268100:intron 60.0%
AGCCAAGCGTCTCCTGCTGC+AGG + chr8_3:1050568-1050587 Msa1268100:CDS 65.0%
! GGGGCTGGTGATCCTGCAGC+AGG - chr8_3:1050583-1050602 None:intergenic 70.0%
TCACCAGCCCCCAGTCCCCG+TGG + chr8_3:1050592-1050611 Msa1268100:CDS 75.0%
CACCAGCCCCCAGTCCCCGT+GGG + chr8_3:1050593-1050612 Msa1268100:CDS 75.0%
ATCCCACGGGGACTGGGGGC+TGG - chr8_3:1050598-1050617 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1047570 1052953 1047570 ID=Msa1268100;Name=Msa1268100
chr8_3 mRNA 1047570 1052953 1047570 ID=Msa1268100-mRNA-1;Parent=Msa1268100;Name=Msa1268100-mRNA-1;_AED=0.03;_eAED=0.03;_QI=274|1|1|1|0.8|0.66|6|421|1081
chr8_3 exon 1047570 1047812 1047570 ID=Msa1268100-mRNA-1:exon:109;Parent=Msa1268100-mRNA-1
chr8_3 exon 1048277 1048412 1048277 ID=Msa1268100-mRNA-1:exon:110;Parent=Msa1268100-mRNA-1
chr8_3 exon 1048940 1049159 1048940 ID=Msa1268100-mRNA-1:exon:111;Parent=Msa1268100-mRNA-1
chr8_3 exon 1049249 1051691 1049249 ID=Msa1268100-mRNA-1:exon:112;Parent=Msa1268100-mRNA-1
chr8_3 exon 1051963 1052005 1051963 ID=Msa1268100-mRNA-1:exon:113;Parent=Msa1268100-mRNA-1
chr8_3 exon 1052098 1052953 1052098 ID=Msa1268100-mRNA-1:exon:114;Parent=Msa1268100-mRNA-1
chr8_3 five_prime_UTR 1047570 1047812 1047570 ID=Msa1268100-mRNA-1:five_prime_utr;Parent=Msa1268100-mRNA-1
chr8_3 five_prime_UTR 1048277 1048307 1048277 ID=Msa1268100-mRNA-1:five_prime_utr;Parent=Msa1268100-mRNA-1
chr8_3 CDS 1048308 1048412 1048308 ID=Msa1268100-mRNA-1:cds;Parent=Msa1268100-mRNA-1
chr8_3 CDS 1048940 1049159 1048940 ID=Msa1268100-mRNA-1:cds;Parent=Msa1268100-mRNA-1
chr8_3 CDS 1049249 1051691 1049249 ID=Msa1268100-mRNA-1:cds;Parent=Msa1268100-mRNA-1
chr8_3 CDS 1051963 1052005 1051963 ID=Msa1268100-mRNA-1:cds;Parent=Msa1268100-mRNA-1
chr8_3 CDS 1052098 1052532 1052098 ID=Msa1268100-mRNA-1:cds;Parent=Msa1268100-mRNA-1
chr8_3 three_prime_UTR 1052533 1052953 1052533 ID=Msa1268100-mRNA-1:three_prime_utr;Parent=Msa1268100-mRNA-1
Gene Sequence

>Msa1268100

ATGGATAGAAGATGGCCTTGGAAGAAAAAATCATCTGATAAGACTGTTCTTGAGAAAGTTGCTGCTGAATTGGACTCTGCTGGTGCATCTAATCAACCCAAACAGGATGTTTATAAGAAGCCGAACCATGTCCAAATTTCTGTAGAGTCATATTCACGTCTGACGGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAGGTTCAGACACTTGAGGATGAGATCAATGAATTAAATGAAAAACTGTCAGCAGCAAACACAGAGATAAATACCAAGGAAGCTTTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAACAGTCTAGAATCTGTCACTCTTTCGAAACTGACTGCTGAGGATCAGGCGTCACAGTTAGACGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAAGAAGAACATGAACTGAAAATACAGGATATTTCCCTTGCAAAAACCAAGCAATTGGACAAGATTAAGGGTGATCTTGAGGCTAGGATACGGAACTTTGAACAGGAACTTCTCAGGTCTGCTGCTGATAATGCGGCTCTGTCTAGGTCCTTGCAGGAGCGCTCTAACATGCTAGTAAAACTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCATCAAAAGAACACCGTAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAGCTGCATGTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCTGAGTGTCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTGGAAGTTGAAAGTCTTGGCCGAGATTATGGCGAAACTCGATTGCGGAAATCTCCTGTTAAACCTTCTAGTCCTCATTTCTCTCCGGTGCCTGATTTCTCCCTCGAGAATATACAGAAATTCCAAAAAGATAATGAATTTCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGTCAAAACGTAACAGCGAATTGCAGGCATCAAGAAGTATGTGTGCCAAAACACTTAGCAAACTTCAAATTTTGGAAGCACAAGGCCAGACAAGTAATCAGCAGAAGGGATCTCCAAAATCTCCCATCCATATGAACCATGAAAGCATATACAGCCAAAATACAGGCTATGCAGCAAGCATGATCTCCATTTCTGAAGATGGTAATGATGATGCGAGAAGTTGTGCCGAGTCTTGGTCGACAGCAATAATCTCTGAGCTATCCCAACTCCCAAAAGAAAAGAATGCTGACGAATTGGGCAAATCTGAGGCGACTAAGAAGTTAGAACTGATGGATGACTTCCTAGAGGTGGAGAAATTTGCTGGATTATCAAATGATTCTAATGAAGACACCTCTTTGCCATTTACTTCAAACAATAAGACAGACGAAATCATGACCGATGATGTATCTGAAGTCAGTACCAGCAAAGATGATATATCCGAGCCTGAAAAGAAGAGTGATTTGAATCCATTGCAAAGCCAAGCGTCTCCTGCTGCAGGATCACCAGCCCCCAGTCCCCGTGGGATTGATAGCTTTTCACCAGCAGATCTTCAATCAAGAATACTGTCAGTGTTTGAATCTATGGCTAAGGATGCTGATGTAGGTAAGATCCTGAAGGATATTAAACATGTTCTTGAAGAAGTACGTGATACTTCCATCCAAGACTCTGTAGCTGAAATTCCCGTCGATGTGCCAGCTTCTGATACTCCATGTGATAAAAAGGATGATCCTGAAGATTTTGGTTCAGTTTCAGAAAAAGAACTTACATCATCCCAAGAACCTTCTGAGTGTATGCAGATAACTTCTGATATAGAAGCTGCAATTTCTCAAATTCACGACTTCGTGTTGTTCCTTGGCAGAGAAGCAATGACAGTTCATGATATATCTTCTGATGGAGATGGTATAAGCCAAAAGATGGAGGAGTTTTCTGTTACTTATAATAAAGTCAAATGCCATGAAGCAAGTTTGCTACAGTTTGTTCTTGATCTGTCTCATTTCTTGGCTAAAACAAGTGAATTCAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCCCTGCCTGAAAATAAGTTAGTTCAAGAAAATTCGTCGGGAGAGAGATATCAAAATGGTCATTCTCATATTCTCAATCCCTGCTCTAATCCTGAGGTTCCTGATGATGGAAATTTGACATCAAGTTATGAATCAAATGTCACGTCACAAAAGTTCTCCATGGAGGACTTTGAGGAATTGAGATTAGAGAAAGAGAAGGCAATTGTGGATCTGTCAAAATATTCTGAAAATCTTGAAATTACAAAATCTCAGTTACAAGAGACCGAGCAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAGGTCAAACAGCTTGTCCGAGACTCAACTCAAATGCATGGCAGAGTCATACAGATCACTTGAAACACGTGCACAGGAGTTTGAAACTGAGCTCAACCATCTACGAATGAAGACAGAAACTCTTGAGAATGAACTTAAAGATGAAAAGAGATCTCATGAAGCAGCTTTGGCAAAGTGCAAGGAGCTAGAAGAACAATTGCAAAGGAATGAGAGTTCAGCTGCTGATAATGAAATTCAGACTAAAAAGGAGAGAGACTTGGCTTCTGCTGCTGAAAAGTTAGCCGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGCTAAAAGCTATGCATCCTCAAACAGAACCAATGGGATCTATGTACAGTGAGAAGCTTTTGAAGGTTGAAGGCTTCACAGAGCATCAACCTCGGAGCCCAAATTTGCAGGATCAGGTGGAGATGGACGGAGCTAGTTTTGGTTTTATGCAAAGGCAGGGTGCAGAGTCCCCTTTGCATTTTACAAACACTTTATATAGTCCATCAGATAATGACTCAAACTTTCAAGCCATATCTCCTGTACACCATCCAAATCACAAGCCTACAAAGTCAGCCTCTTCATCAGCTTCTTCCACTCCTACACCGGAAAAACATGGCCGAGGTTTTAGCAGATTCTTTTCATCAAAAGGAAAAACCGGTCATTGA
Protein sequence

>Msa1268100

MDRRWPWKKKSSDKTVLEKVAAELDSAGASNQPKQDVYKKPNHVQISVESYSRLTGLEDQVKTYEEKVQTLEDEINELNEKLSAANTEINTKEALVKQHAKVAEEAVSGWEKAEAEALALKNSLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQDISLAKTKQLDKIKGDLEARIRNFEQELLRSAADNAALSRSLQERSNMLVKLSEEKAHAEAEIEHQKNTVESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPSSPHFSPVPDFSLENIQKFQKDNEFLTERLLTMEEETKMLKEALSKRNSELQASRSMCAKTLSKLQILEAQGQTSNQQKGSPKSPIHMNHESIYSQNTGYAASMISISEDGNDDARSCAESWSTAIISELSQLPKEKNADELGKSEATKKLELMDDFLEVEKFAGLSNDSNEDTSLPFTSNNKTDEIMTDDVSEVSTSKDDISEPEKKSDLNPLQSQASPAAGSPAPSPRGIDSFSPADLQSRILSVFESMAKDADVGKILKDIKHVLEEVRDTSIQDSVAEIPVDVPASDTPCDKKDDPEDFGSVSEKELTSSQEPSECMQITSDIEAAISQIHDFVLFLGREAMTVHDISSDGDGISQKMEEFSVTYNKVKCHEASLLQFVLDLSHFLAKTSEFRFNILGYKGMETETNSPDCIDKIALPENKLVQENSSGERYQNGHSHILNPCSNPEVPDDGNLTSSYESNVTSQKFSMEDFEELRLEKEKAIVDLSKYSENLEITKSQLQETEQLLAEVKSQLASAQRSNSLSETQLKCMAESYRSLETRAQEFETELNHLRMKTETLENELKDEKRSHEAALAKCKELEEQLQRNESSAADNEIQTKKERDLASAAEKLAECQETIYLLGKQLKAMHPQTEPMGSMYSEKLLKVEGFTEHQPRSPNLQDQVEMDGASFGFMQRQGAESPLHFTNTLYSPSDNDSNFQAISPVHHPNHKPTKSASSSASSTPTPEKHGRGFSRFFSSKGKTGH*