AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268590 MtrunA17_Chr5g0401291 95.643 918 30 3 1 918 1 908 0.0 1761
Msa1268590 MtrunA17_Chr4g0054001 56.243 937 301 25 8 918 4 857 0.0 859
Msa1268590 MtrunA17_Chr7g0249941 58.836 464 175 9 464 918 556 1012 4.32e-162 501
Msa1268590 MtrunA17_Chr8g0347491 55.000 520 196 10 394 898 553 1049 7.35e-157 488
Msa1268590 MtrunA17_Chr1g0192111 54.279 409 170 8 475 876 497 895 2.33e-132 419
Msa1268590 MtrunA17_Chr4g0023611 49.883 429 185 7 463 874 387 802 6.45e-125 399
Msa1268590 MtrunA17_Chr2g0319201 50.235 426 192 8 462 874 382 800 1.91e-122 392
Msa1268590 MtrunA17_Chr4g0042081 51.196 418 183 9 470 874 527 936 5.84e-119 386
Msa1268590 MtrunA17_Chr2g0323071 46.420 433 211 8 461 881 304 727 6.13e-110 357
Msa1268590 MtrunA17_Chr5g0414941 42.459 431 211 10 475 876 414 836 2.24e-93 314
Msa1268590 MtrunA17_Chr8g0364331 40.045 442 233 10 457 875 294 726 1.09e-92 309
Msa1268590 MtrunA17_Chr3g0118231 37.423 489 269 8 398 876 182 643 6.42e-87 292
Msa1268590 MtrunA17_Chr4g0074091 29.765 383 219 10 451 821 768 1112 3.62e-36 148
Msa1268590 MtrunA17_Chr1g0150261 27.322 366 217 9 468 821 1357 1685 4.68e-32 135
Msa1268590 MtrunA17_Chr4g0061111 28.022 364 208 11 476 824 1171 1495 6.20e-32 135
Msa1268590 MtrunA17_Chr5g0409151 26.168 214 127 4 610 821 2 186 1.34e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268590 AT5G67470.1 72.360 445 108 6 467 908 453 885 0.0 635
Msa1268590 AT3G25500.1 61.818 440 150 6 465 898 588 1015 3.84e-172 528
Msa1268590 AT2G43800.1 49.451 546 201 10 350 885 376 856 3.13e-147 459
Msa1268590 AT3G05470.1 51.699 412 176 8 474 874 469 868 1.53e-125 401
Msa1268590 AT5G48360.1 51.613 341 134 5 541 875 466 781 1.35e-98 327
Msa1268590 AT1G70140.1 42.155 427 221 8 475 883 305 723 2.63e-92 309
Msa1268590 AT1G59910.1 41.205 415 222 9 473 874 460 865 3.11e-85 293
Msa1268590 AT3G07540.1 41.646 413 184 6 469 874 472 834 9.10e-80 276
Msa1268590 AT1G24150.2 45.540 213 110 3 475 686 312 519 4.12e-47 177
Msa1268590 AT5G58160.1 28.412 359 205 10 475 821 838 1156 1.91e-31 133
Msa1268590 AT5G07740.3 28.784 403 226 15 473 832 1222 1606 3.07e-31 133
Msa1268590 AT5G07740.1 28.784 403 226 15 473 832 1244 1628 3.80e-31 132
Msa1268590 AT4G15200.4 47.973 148 68 4 467 612 321 461 9.66e-31 127
Msa1268590 AT4G15200.2 47.973 148 68 4 467 612 322 462 1.07e-30 127
Msa1268590 AT1G31810.2 26.873 387 234 9 473 848 816 1164 1.67e-30 130
Msa1268590 AT1G31810.1 26.873 387 234 9 473 848 816 1164 1.67e-30 130
Msa1268590 AT3G25493.1 50.909 110 52 1 789 898 30 137 2.47e-29 115
Msa1268590 AT5G07740.2 26.790 433 230 16 473 832 1244 1662 3.24e-27 120
Msa1268590 AT5G07770.1 22.872 376 236 7 476 842 192 522 1.70e-25 113
Msa1268590 AT5G07770.3 22.872 376 236 7 476 842 199 529 1.80e-25 113
Msa1268590 AT5G07770.4 27.413 259 164 5 476 727 58 299 5.04e-25 111
Msa1268590 AT3G32400.2 28.235 255 167 7 473 718 93 340 2.26e-24 108
Msa1268590 AT5G07770.2 23.920 301 198 3 544 842 224 495 2.30e-23 106
Msa1268590 AT5G07760.1 27.397 219 157 2 544 761 523 740 8.46e-23 105
Msa1268590 AT5G07760.2 27.397 219 157 2 544 761 523 740 9.97e-23 105
Msa1268590 AT5G07650.2 31.250 176 121 0 543 718 468 643 1.68e-21 100
Msa1268590 AT2G25050.1 23.238 383 225 11 473 821 742 1089 1.05e-20 99.0
Msa1268590 AT3G32400.1 27.309 249 157 8 473 704 85 326 1.51e-18 90.5
Msa1268590 AT5G07650.1 28.500 200 119 1 543 718 468 667 2.70e-18 90.9
Msa1268590 AT4G15200.3 43.636 110 55 3 467 574 322 426 4.34e-18 88.6
Msa1268590 AT5G07780.1 25.287 261 164 6 473 718 75 319 6.89e-17 85.1

Find 239 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAATTCATGTCTGAATT+TGG 0.144023 8_3:+1658365 None:intergenic
CCTTTATATCTACGAGTTTC+AGG 0.157132 8_3:+1654528 None:intergenic
AAACTCTTCCTCGTTAAATT+TGG 0.167753 8_3:+1654397 None:intergenic
TGAAGTTTCTGAAGCTCTTT+TGG 0.202919 8_3:-1656505 Msa1268590:CDS
TTTCTAACACCTTGTTCTTT+TGG 0.224439 8_3:+1656627 None:intergenic
ACCACCGCCACCTCCGAATT+TGG 0.228198 8_3:-1657243 Msa1268590:CDS
ACAATCATGAAAATTCTTAA+AGG 0.232010 8_3:+1654062 None:intergenic
CTGTTCTGAGAACAGCTTCC+AGG 0.238609 8_3:+1654612 None:intergenic
CCTGAAACTCGTAGATATAA+AGG 0.289953 8_3:-1654528 Msa1268590:CDS
AAGAAATTGCCTCTCATATC+TGG 0.299218 8_3:+1654221 None:intergenic
GAAAGAGCAGATTTCGATTT+CGG 0.313337 8_3:+1657401 None:intergenic
CGAATTCTTCTGCATCTATA+AGG 0.316195 8_3:-1657064 Msa1268590:CDS
TTGCAAATTTGAACTCTCAT+TGG 0.320314 8_3:-1653800 Msa1268590:three_prime_UTR
ACGTATGCTATAGTCAAAAT+AGG 0.325006 8_3:-1653552 Msa1268590:three_prime_UTR
CACCATTGCCTGTTCTTAAC+AGG 0.326672 8_3:-1653935 Msa1268590:CDS
TAGTAGGAGCCATCTTTACT+AGG 0.328099 8_3:+1654950 None:intergenic
TTGGAGGAAGGTTGTGGTGG+TGG 0.328521 8_3:+1658127 None:intergenic
GGTGGCGGTGGTGGTGGTGG+TGG 0.328581 8_3:+1657140 None:intergenic
CATACAGTTGAACACTTTCC+TGG 0.329821 8_3:-1653674 Msa1268590:three_prime_UTR
GGCGGTGGAGGTGGCGGTGG+TGG 0.330446 8_3:+1657131 None:intergenic
AGGCAGCAAGTGAGGAATTA+AGG 0.331528 8_3:-1654658 Msa1268590:CDS
ACTTTCCTGGTTCACTCAAA+TGG 0.337820 8_3:-1653661 Msa1268590:three_prime_UTR
TTGTGGTCCAAGAGATCATT+AGG 0.342540 8_3:-1654475 Msa1268590:CDS
GGTGGAGGTGGCGGTGGTGG+TGG 0.348836 8_3:+1657134 None:intergenic
AGAAGAAATTGTGAGGATTA+AGG 0.351806 8_3:-1654165 Msa1268590:CDS
GGAGGTGGCGGTGGTGGTGG+TGG 0.352358 8_3:+1657137 None:intergenic
AGCTCAGCACCCAGACCTTC+AGG 0.352759 8_3:+1654982 None:intergenic
TTTATCTCTTCCTCTTTAGT+AGG 0.353661 8_3:+1654934 None:intergenic
AAAATATAGCTATACTGTTA+AGG 0.357268 8_3:-1656548 Msa1268590:CDS
TGATTCGACGGTGGTGCGTC+TGG 0.362482 8_3:+1658079 None:intergenic
GGTGGCGGTGGAGGTGGCGG+TGG 0.363694 8_3:+1657128 None:intergenic
CGTTAAATTTGGAGTCCATT+TGG 0.363903 8_3:+1654408 None:intergenic
GACGGCGACCTTTCGAAACT+TGG 0.364098 8_3:-1654898 Msa1268590:CDS
GAAGTTACTGAATACTTTCA+TGG 0.364864 8_3:-1654110 Msa1268590:CDS
GGAGGTGGCGGTGGAGGTGG+CGG 0.364899 8_3:+1657125 None:intergenic
AACAGGGAGTCCTGAAGGTC+TGG 0.371619 8_3:-1654992 Msa1268590:intron
TGCAAATTTGAACTCTCATT+GGG 0.373007 8_3:-1653799 Msa1268590:three_prime_UTR
CCGTTTGGAGGTTTACTTAA+CGG 0.379088 8_3:+1657638 None:intergenic
TGCCATTGTCCTCATTCAAA+TGG 0.385400 8_3:-1653618 Msa1268590:three_prime_UTR
GGCGGTGGTGCTGAGAATTT+CGG 0.385880 8_3:+1657257 None:intergenic
ATGATGACGTGTCGAATATC+AGG 0.389397 8_3:+1657368 None:intergenic
GACCACATTGCTACACTTTG+TGG 0.390580 8_3:-1654492 Msa1268590:CDS
GAGTTGAAGCTATGCTATAC+AGG 0.393201 8_3:-1654822 Msa1268590:CDS
GAGGAAGGTTGTGGTGGTGG+TGG 0.393347 8_3:+1658130 None:intergenic
GCCGGTGGAATGTTTCCGTT+TGG 0.394668 8_3:+1657623 None:intergenic
GATTGAAGATGCGCCAAATT+CGG 0.397654 8_3:+1657230 None:intergenic
TACGTTACAAAGCTTGAAAC+GGG 0.399392 8_3:-1654281 Msa1268590:CDS
GGTGGTGGTGTGACGGTGGA+GGG 0.403927 8_3:+1658145 None:intergenic
GTCATTGGAGGTGGCGGTGG+AGG 0.407110 8_3:+1657119 None:intergenic
CCGGTTATTCTTCAAACTCC+TGG 0.408210 8_3:-1654630 Msa1268590:CDS
ATTGGAGGTGGCGGTGGAGG+TGG 0.410425 8_3:+1657122 None:intergenic
CCAGGAGTTTGAAGAATAAC+CGG 0.416902 8_3:+1654630 None:intergenic
TTTCAATGATTCTAATGTAC+TGG 0.418156 8_3:+1653371 None:intergenic
GGAGGAGTTTGCTTGATAGA+AGG 0.418877 8_3:+1657344 None:intergenic
AGAAAAGAGGAAACTTCTTT+CGG 0.420368 8_3:+1658439 None:intergenic
ATAGCCATACCTCAAGGGTT+TGG 0.421616 8_3:+1654758 None:intergenic
ATACCGATCGGATCGCTTAA+CGG 0.423288 8_3:+1657691 None:intergenic
GATATGATGGAGTCTTTGTT+TGG 0.423986 8_3:-1656681 Msa1268590:CDS
CTGGAAGCTGTTCTCAGAAC+AGG 0.424510 8_3:-1654611 Msa1268590:CDS
TGGTGGTGGTGTGACGGTGG+AGG 0.425651 8_3:+1658144 None:intergenic
GGTGGTGGTGCTGTACTCGC+TGG 0.429739 8_3:+1658172 None:intergenic
CTTTCCTGGTTCACTCAAAT+GGG 0.429777 8_3:-1653660 Msa1268590:three_prime_UTR
CGTGTCATTGGAGGTGGCGG+TGG 0.432189 8_3:+1657116 None:intergenic
CTTCAGACCTAATGATCTCT+TGG 0.432622 8_3:+1654468 None:intergenic
CAATGCAATGCTTTCAACTT+CGG 0.435102 8_3:+1656900 None:intergenic
CTGAAACTCGTAGATATAAA+GGG 0.436598 8_3:-1654527 Msa1268590:CDS
TCATTCGCCGCAGAATTCTT+CGG 0.436758 8_3:-1657552 Msa1268590:CDS
GGTGTGACGGTGGAGGGTGA+TGG 0.437575 8_3:+1658151 None:intergenic
AAATATAGCTATACTGTTAA+GGG 0.440267 8_3:-1656547 Msa1268590:CDS
CAATCATGAAAATTCTTAAA+GGG 0.441745 8_3:+1654063 None:intergenic
GCTTGAATTATGAGGTTTCA+TGG 0.443793 8_3:+1658321 None:intergenic
GGTTTACTTAACGGCGGCAT+TGG 0.447145 8_3:+1657647 None:intergenic
GATTTGGTTTGCAAAGAAGT+TGG 0.447424 8_3:-1654017 Msa1268590:CDS
ATGGAAGAATGGAATGTTGT+TGG 0.450272 8_3:+1658108 None:intergenic
GCCAAATTCGGAGGTGGCGG+TGG 0.451685 8_3:+1657242 None:intergenic
GGCGGCATTGGCTGTAACTC+CGG 0.453098 8_3:+1657659 None:intergenic
GGTGGTGGTGGTGGAGTAGG+AGG 0.453954 8_3:+1657158 None:intergenic
GTTGTAGCGTTAGAAGTTAA+CGG 0.455696 8_3:+1658043 None:intergenic
GCTGTACTCGCTGGGAATAA+TGG 0.457255 8_3:+1658181 None:intergenic
TCGCTGGGAATAATGGTTGA+TGG 0.458107 8_3:+1658188 None:intergenic
AGGTCTGGGTGCTGAGCTAT+TGG 0.458304 8_3:-1654977 Msa1268590:CDS
CTACGTTACAAAGCTTGAAA+CGG 0.460088 8_3:-1654282 Msa1268590:CDS
TAGATTAAATGAAGATATGA+TGG 0.461193 8_3:-1656694 Msa1268590:CDS
AATTTGGAGTCCATTTGGTT+GGG 0.463510 8_3:+1654413 None:intergenic
CGAAGTTGAAAGCATTGCAT+TGG 0.466382 8_3:-1656899 Msa1268590:CDS
GATAGCTGACGTGGCGGTGG+AGG 0.466571 8_3:+1657326 None:intergenic
GCAGAATTCTTCGGTAAGTC+AGG 0.467099 8_3:-1657543 Msa1268590:CDS
TTCTCTCAGTAACGGTAGTC+CGG 0.470525 8_3:-1657480 Msa1268590:CDS
GCTTTAAGAAATCTTTCTGC+AGG 0.474915 8_3:+1654874 None:intergenic
TGGTGGTGGTGGTGTGACGG+TGG 0.478764 8_3:+1658141 None:intergenic
ATGTTGTTGGAGGAAGGTTG+TGG 0.480376 8_3:+1658121 None:intergenic
CGGAAGTATACCCAACCAAA+TGG 0.480730 8_3:-1654423 Msa1268590:CDS
GTGACGGTGGAGGGTGATGG+TGG 0.483527 8_3:+1658154 None:intergenic
CCATTGTACCTGTTAAGAAC+AGG 0.485981 8_3:+1653927 None:intergenic
TTATGATACGGTGAACGGTT+AGG 0.486732 8_3:+1657722 None:intergenic
CTGTTCTTAACAGGTACAAT+GGG 0.486759 8_3:-1653926 Msa1268590:CDS
CGATCGGTATCGACCGAGTC+CGG 0.487968 8_3:-1657678 Msa1268590:CDS
AAATTTGGAGTCCATTTGGT+TGG 0.488244 8_3:+1654412 None:intergenic
TTGCTGTTTGATCTCAATGA+AGG 0.488965 8_3:+1653738 None:intergenic
CTCTCCATTGTTTCCCGCTG+AGG 0.489398 8_3:-1658412 Msa1268590:five_prime_UTR
TCTTTGTTTGGTTGCAACAA+TGG 0.489490 8_3:-1656669 Msa1268590:CDS
GGTGGAATGTTTCCGTTTGG+AGG 0.490417 8_3:+1657626 None:intergenic
TCCGATAGCTGACGTGGCGG+TGG 0.492256 8_3:+1657323 None:intergenic
ACGGTGGAGGGTGATGGTGG+TGG 0.492714 8_3:+1658157 None:intergenic
ATTGGAAACCCTAGTAAAGA+TGG 0.492944 8_3:-1654959 Msa1268590:CDS
AGTGAAGGAGGTGGTTCTGT+TGG 0.496844 8_3:-1657035 Msa1268590:CDS
TTCATCAAATTCATCTGCTC+CGG 0.498145 8_3:-1657831 Msa1268590:CDS
ACACGCCGTATTCAGTTTCA+CGG 0.499766 8_3:-1657508 Msa1268590:CDS
ACGGCAACACAACCAGCAAA+AGG 0.504839 8_3:-1658010 Msa1268590:CDS
GAAGTTGAAAGCATTGCATT+GGG 0.508504 8_3:-1656898 Msa1268590:CDS
AGTAGGAGCCATCTTTACTA+GGG 0.508791 8_3:+1654951 None:intergenic
TCCGTTGGAATCGTAACGTT+AGG 0.508832 8_3:-1657962 Msa1268590:CDS
TTTGCTGGTTGTGTTGCCGT+TGG 0.510570 8_3:+1658013 None:intergenic
TCTGTTGGTAGTGTAAGAAA+AGG 0.511081 8_3:-1657020 Msa1268590:CDS
TCTTGAATGTCCTACTCCAT+CGG 0.512217 8_3:+1657283 None:intergenic
GTGGTGCGTCTGGATATTCA+TGG 0.512799 8_3:+1658089 None:intergenic
AGCTTCTTCAACAAGCCTCT+CGG 0.512915 8_3:+1656944 None:intergenic
GCCATTGTCCTCATTCAAAT+GGG 0.513310 8_3:-1653617 Msa1268590:three_prime_UTR
GTTGATTTCTGAATCGAAGT+TGG 0.517873 8_3:+1654798 None:intergenic
ATTGGCTGTAACTCCGGACT+CGG 0.520143 8_3:+1657665 None:intergenic
TGGTATAAACATTAAAATGT+AGG 0.520292 8_3:+1653391 None:intergenic
TCTTCGGTAAGTCAGGAAGA+TGG 0.523226 8_3:-1657536 Msa1268590:CDS
TGCGCCAAATTCGGAGGTGG+CGG 0.523422 8_3:+1657239 None:intergenic
GGTGAACGGTTAGGCTTCTC+CGG 0.524180 8_3:+1657731 None:intergenic
GTTTCCCGCTGAGGAATTCA+CGG 0.524837 8_3:-1658403 Msa1268590:five_prime_UTR
AACGGATTGCATGTTGTGGC+TGG 0.524954 8_3:-1654368 Msa1268590:CDS
CGTTTCGTTACTTTCTTCGT+CGG 0.526269 8_3:+1657580 None:intergenic
ATTAAATGCATGTTCGTGGT+GGG 0.527872 8_3:-1653711 Msa1268590:three_prime_UTR
TCTTCTTGTGTGATGATGAT+CGG 0.529598 8_3:+1658216 None:intergenic
ACGGAATTCAGTTTATGATA+CGG 0.530304 8_3:+1657710 None:intergenic
AGAAAATTCGAAGCTACTAC+CGG 0.531207 8_3:+1657812 None:intergenic
GAATTACTTTCTTTCTTCGC+CGG 0.531635 8_3:+1657461 None:intergenic
ATAAGGAGGTTAAGTGAAGG+AGG 0.533192 8_3:-1657047 Msa1268590:CDS
CTTTCATGGGAATGCTGCAA+AGG 0.533599 8_3:-1654096 Msa1268590:CDS
TCTGGATATTCATGGAAGAA+TGG 0.534227 8_3:+1658097 None:intergenic
TGGTTTGCAAAGAAGTTGGA+AGG 0.536182 8_3:-1654013 Msa1268590:CDS
GCAGAAACTGCATCTGCAAA+CGG 0.538954 8_3:-1654443 Msa1268590:CDS
ATATACCTCCCATTTGAATG+AGG 0.539037 8_3:+1653609 None:intergenic
AGGATGCATGATAGAATTGT+TGG 0.540134 8_3:-1653993 Msa1268590:CDS
CCTGTTCTTAACAGGTACAA+TGG 0.541687 8_3:-1653927 Msa1268590:CDS
AAAGATGGCTCCTACTAAAG+AGG 0.542571 8_3:-1654944 Msa1268590:CDS
AATGGAATGTTGTTGGAGGA+AGG 0.543390 8_3:+1658115 None:intergenic
AAACATTAAATGCATGTTCG+TGG 0.544420 8_3:-1653715 Msa1268590:three_prime_UTR
CTGCAGGTCCAAGTTTCGAA+AGG 0.545387 8_3:+1654890 None:intergenic
TTCTGATCGTGCTACTGTGT+GGG 0.548187 8_3:-1656859 Msa1268590:CDS
GAATTCGAAACCACCGGTGT+CGG 0.548683 8_3:+1657080 None:intergenic
GGTCAACGATCAGAATCAAC+CGG 0.551067 8_3:-1657750 Msa1268590:CDS
ACAGGGAGTCCTGAAGGTCT+GGG 0.553891 8_3:-1654991 Msa1268590:intron
CTCTGCCGTGAAACTGAATA+CGG 0.554150 8_3:+1657503 None:intergenic
GTAGCTATAGCAATCTCCGT+TGG 0.556822 8_3:-1657977 Msa1268590:CDS
GTGAGGAATTAAGGAATAGC+CGG 0.557672 8_3:-1654649 Msa1268590:CDS
GTAGATATAAAGGGAACAGA+TGG 0.558654 8_3:-1654518 Msa1268590:CDS
TTGTTGGAGGAAGGTTGTGG+TGG 0.558863 8_3:+1658124 None:intergenic
CAAGAGATCATTAGGTCTGA+AGG 0.560003 8_3:-1654467 Msa1268590:CDS
TCCACCGCCACGTCAGCTAT+CGG 0.561384 8_3:-1657324 Msa1268590:CDS
AATTCCTCAGCGGGAAACAA+TGG 0.562807 8_3:+1658408 None:intergenic
CATTAAATGCATGTTCGTGG+TGG 0.563145 8_3:-1653712 Msa1268590:three_prime_UTR
GTAGCCCATTTGAGTGAACC+AGG 0.565511 8_3:+1653656 None:intergenic
AATGAAACAGGGAGTCCTGA+AGG 0.566792 8_3:-1654997 Msa1268590:intron
AAGTTACTGAATACTTTCAT+GGG 0.566826 8_3:-1654109 Msa1268590:CDS
ATGTTGAAGCTTGAATTATG+AGG 0.571481 8_3:+1658313 None:intergenic
CGTAACGTTAGGAATGTTGT+CGG 0.572626 8_3:-1657951 Msa1268590:CDS
CGACGAAGAAAGTAACGAAA+CGG 0.573818 8_3:-1657579 Msa1268590:CDS
TCTTCTTCCGACGACATCGC+CGG 0.574108 8_3:+1657605 None:intergenic
TGTTGAAGAAGCTAATGAAA+CGG 0.574348 8_3:-1656934 Msa1268590:CDS
TCTTCCGTGAATTCCTCAGC+GGG 0.576175 8_3:+1658399 None:intergenic
GAGGAAGAGTTTAAGAAGAA+CGG 0.577887 8_3:-1654386 Msa1268590:CDS
CGCTACAACAGCGAATCCAA+CGG 0.578077 8_3:-1658029 Msa1268590:CDS
ACCGTCGTTGACCTTCTCGA+AGG 0.578810 8_3:+1657770 None:intergenic
TTTCGTGTCATTGGAGGTGG+CGG 0.578958 8_3:+1657113 None:intergenic
ACAGGAAATAGAATGAATGT+TGG 0.583758 8_3:-1654593 Msa1268590:CDS
AGGAGGTTAAGTGAAGGAGG+TGG 0.584698 8_3:-1657044 Msa1268590:CDS
ATGTCCTACTCCATCGGAGG+AGG 0.584834 8_3:+1657289 None:intergenic
AAAATCAGTGTCGCCGACAC+CGG 0.585534 8_3:-1657093 Msa1268590:CDS
ATTCACATCATTAAAATGTG+TGG 0.585641 8_3:+1653505 None:intergenic
TTCTGTTGATCATGAGAACA+AGG 0.586576 8_3:-1656592 Msa1268590:CDS
TCAGTTTATGATACGGTGAA+CGG 0.589581 8_3:+1657717 None:intergenic
CCGTTAAGTAAACCTCCAAA+CGG 0.593283 8_3:-1657638 Msa1268590:CDS
GTGGTGGTGCTGTACTCGCT+GGG 0.594657 8_3:+1658173 None:intergenic
GGGTTTGGAAAGACTTCTTG+AGG 0.594870 8_3:+1654773 None:intergenic
TATCTGCCAGGCAGCAAGTG+AGG 0.597764 8_3:-1654666 Msa1268590:intron
AAGAGAATTGTTCCTCTGTG+TGG 0.598217 8_3:+1657859 None:intergenic
GCTGCTTGATTCTGATTCGA+CGG 0.600193 8_3:+1658067 None:intergenic
TTAAATGCATGTTCGTGGTG+GGG 0.603383 8_3:-1653710 Msa1268590:three_prime_UTR
GAAGATGATGAAGATTATGA+TGG 0.603988 8_3:+1658288 None:intergenic
GAAAGATAGCCATACCTCAA+GGG 0.604920 8_3:+1654753 None:intergenic
GAAGAATGGAATGTTGTTGG+AGG 0.605374 8_3:+1658111 None:intergenic
GCAGAAGAATTCGAAACCAC+CGG 0.605400 8_3:+1657074 None:intergenic
CATTCCACCGGCGATGTCGT+CGG 0.605871 8_3:-1657612 Msa1268590:CDS
GATTAAGGCTCATGAGAGAG+AGG 0.608378 8_3:-1654150 Msa1268590:CDS
TGTTTCTCCGATAGCTGACG+TGG 0.609728 8_3:+1657317 None:intergenic
ATGAATGTTGGTACTAATCG+AGG 0.613150 8_3:-1654581 Msa1268590:CDS
AAACAGTTAACCTCCTCCGA+TGG 0.618020 8_3:-1657299 Msa1268590:CDS
TTCACTAGTAGCAAAAGTGA+AGG 0.618040 8_3:-1653765 Msa1268590:three_prime_UTR
ATTCTTCTGCATCTATAAGG+AGG 0.618549 8_3:-1657061 Msa1268590:CDS
ATCAGTGTCGCCGACACCGG+TGG 0.619955 8_3:-1657090 Msa1268590:CDS
AGATGCGCCAAATTCGGAGG+TGG 0.620461 8_3:+1657236 None:intergenic
ATTCAGTAACTTCTTTCACA+AGG 0.622158 8_3:+1654120 None:intergenic
TTGTTCTCATGATCAACAGA+AGG 0.625101 8_3:+1656594 None:intergenic
CGGCAGAGTTCTCTCAGTAA+CGG 0.625992 8_3:-1657488 Msa1268590:CDS
TTAACCTCCTCCGATGGAGT+AGG 0.628605 8_3:-1657293 Msa1268590:CDS
CTTCTGATCGTGCTACTGTG+TGG 0.628803 8_3:-1656860 Msa1268590:CDS
GAAGAACGGATTGCATGTTG+TGG 0.629538 8_3:-1654372 Msa1268590:CDS
TCTTCCGACGACATCGCCGG+TGG 0.630955 8_3:+1657608 None:intergenic
TCCAAACGGAAACATTCCAC+CGG 0.631230 8_3:-1657624 Msa1268590:CDS
TACCTGTTAAGAACAGGCAA+TGG 0.632916 8_3:+1653933 None:intergenic
GCTGGTCTCAGTAAAGACCT+TGG 0.636005 8_3:-1654350 Msa1268590:CDS
TTTGTATTCACAATACTAAG+GGG 0.636042 8_3:+1653869 None:intergenic
GAAGCTAATGAAACGGAAGG+TGG 0.641793 8_3:-1656927 Msa1268590:CDS
GAAGAAAGAAAGTAATTCGA+CGG 0.642566 8_3:-1657456 Msa1268590:CDS
GCTTGATTCTGATTCGACGG+TGG 0.642616 8_3:+1658070 None:intergenic
ATTTGAGATCTTCTTCCGAG+AGG 0.645071 8_3:-1656959 Msa1268590:CDS
ATTCCGTTAAGCGATCCGAT+CGG 0.645648 8_3:-1657694 Msa1268590:CDS
TGAAGATGCGCCAAATTCGG+AGG 0.650181 8_3:+1657233 None:intergenic
ACAAGATAGAAGCTCAGACG+AGG 0.652676 8_3:-1653901 Msa1268590:CDS
GAAGTCTTTCCAAACCCTTG+AGG 0.654822 8_3:-1654767 Msa1268590:intron
GAAGAAGCTAATGAAACGGA+AGG 0.657154 8_3:-1656930 Msa1268590:CDS
TCCTAACGTTACGATTCCAA+CGG 0.658338 8_3:+1657961 None:intergenic
TATGAGAAACCAGATATGAG+AGG 0.659545 8_3:-1654230 Msa1268590:CDS
ATTGTCCTCATTCAAATGGG+AGG 0.660660 8_3:-1653614 Msa1268590:three_prime_UTR
GAACTGTGGAACCTTCGAGA+AGG 0.666216 8_3:-1657781 Msa1268590:CDS
AGTTGAAGCTATGCTATACA+GGG 0.666948 8_3:-1654821 Msa1268590:CDS
ACGCAGAAGAAGAAATTGTG+AGG 0.668122 8_3:-1654172 Msa1268590:CDS
ATGCATGATAGAATTGTTGG+TGG 0.671664 8_3:-1653990 Msa1268590:CDS
TCTATAAGGAGGTTAAGTGA+AGG 0.672605 8_3:-1657050 Msa1268590:CDS
TCCCATTTGAATGAGGACAA+TGG 0.672995 8_3:+1653616 None:intergenic
CGGACTCGGTCGATACCGAT+CGG 0.675727 8_3:+1657679 None:intergenic
TTCTTCCGTGAATTCCTCAG+CGG 0.676446 8_3:+1658398 None:intergenic
GCTCCAAAACCAAAAGAACA+AGG 0.677455 8_3:-1656636 Msa1268590:CDS
TGAATGTCCTACTCCATCGG+AGG 0.684539 8_3:+1657286 None:intergenic
TGACTTACCGAAGAATTCTG+CGG 0.688640 8_3:+1657545 None:intergenic
TTTGGAGGTTTACTTAACGG+CGG 0.693198 8_3:+1657641 None:intergenic
ATTGTGATGACGGAATCTGT+CGG 0.696376 8_3:-1658493 None:intergenic
GACCACAAAGTGTAGCAATG+TGG 0.710439 8_3:+1654490 None:intergenic
TTCTCCGATAGCTGACGTGG+CGG 0.720484 8_3:+1657320 None:intergenic
ACGTTACAAAGCTTGAAACG+GGG 0.722165 8_3:-1654280 Msa1268590:CDS
ACCTTCGAGAAGGTCAACGA+CGG 0.731915 8_3:-1657771 Msa1268590:CDS
AATGGACTCCAAATTTAACG+AGG 0.750084 8_3:-1654405 Msa1268590:CDS
TAGTGAGTACTTCCACACAG+AGG 0.774217 8_3:-1657871 Msa1268590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCAAAAAAAATTTTTTTTTT+GGG + chr8_3:1656399-1656418 None:intergenic 10.0%
!!! ACCAAAAAAAATTTTTTTTT+TGG + chr8_3:1656400-1656419 None:intergenic 10.0%
!!! TTTTATTTTTTAATGAAACA+GGG - chr8_3:1656823-1656842 Msa1268590:intron 10.0%
!!! TCTATATATCTATCATTTTT+GGG - chr8_3:1655046-1655065 Msa1268590:intron 15.0%
!!! ATTCAGTTCATTTTTTTTTT+AGG - chr8_3:1655648-1655667 Msa1268590:intron 15.0%
!!! TTCAGTTCATTTTTTTTTTA+GGG - chr8_3:1655649-1655668 Msa1268590:intron 15.0%
!!! AATTTTTTTTTTGGGAATAA+TGG + chr8_3:1656391-1656410 None:intergenic 15.0%
!!! CCCAAAAAAAAAATTTTTTT+TGG - chr8_3:1656396-1656415 Msa1268590:intron 15.0%
!! TAAATAAACTTTAAATTGTG+TGG - chr8_3:1656444-1656463 Msa1268590:intron 15.0%
!!! GTTTTATTTTTTAATGAAAC+AGG - chr8_3:1656822-1656841 Msa1268590:intron 15.0%
!! ATAAAATTGAAAAACTATGA+CGG - chr8_3:1656915-1656934 Msa1268590:CDS 15.0%
!!! CTCTATATATCTATCATTTT+TGG - chr8_3:1655045-1655064 Msa1268590:intron 20.0%
!! TAGATTAAATGAAGATATGA+TGG - chr8_3:1655137-1655156 Msa1268590:intron 20.0%
!! AAAATATAGCTATACTGTTA+AGG - chr8_3:1655283-1655302 Msa1268590:intron 20.0%
!! AAATATAGCTATACTGTTAA+GGG - chr8_3:1655284-1655303 Msa1268590:intron 20.0%
!!! CAAATCACATTTTCTAATTT+TGG - chr8_3:1655422-1655441 Msa1268590:intron 20.0%
!!! TTTTGGTAAAACATACAAAT+TGG - chr8_3:1655439-1655458 Msa1268590:intron 20.0%
!! TTTGGTAAAACATACAAATT+GGG - chr8_3:1655440-1655459 Msa1268590:intron 20.0%
!!! TCATTATGTTATTTTAAGAG+AGG - chr8_3:1655839-1655858 Msa1268590:intron 20.0%
!! GTTTAATGACAAAAATTCTT+CGG + chr8_3:1656020-1656039 None:intergenic 20.0%
!!! GAACATAAGTTAGTTAATTT+TGG + chr8_3:1656061-1656080 None:intergenic 20.0%
!!! TTCTGATATTTCACATATTT+TGG + chr8_3:1656711-1656730 None:intergenic 20.0%
!! CAATCATGAAAATTCTTAAA+GGG + chr8_3:1657771-1657790 None:intergenic 20.0%
!! ACAATCATGAAAATTCTTAA+AGG + chr8_3:1657772-1657791 None:intergenic 20.0%
!!! TTTTCTAAACATTTTGGATT+TGG - chr8_3:1657798-1657817 Msa1268590:CDS 20.0%
!!! TTTTGTATTCACAATACTAA+GGG + chr8_3:1657966-1657985 None:intergenic 20.0%
!!! TTTTTGTATTCACAATACTA+AGG + chr8_3:1657967-1657986 None:intergenic 20.0%
!!! TTTTAATGATGTGAATGTTT+TGG - chr8_3:1658333-1658352 Msa1268590:exon 20.0%
!! TGGTATAAACATTAAAATGT+AGG + chr8_3:1658443-1658462 None:intergenic 20.0%
! GAAAATGTGATTTGAAAGTT+TGG + chr8_3:1655416-1655435 None:intergenic 25.0%
! TTGGTAAAACATACAAATTG+GGG - chr8_3:1655441-1655460 Msa1268590:intron 25.0%
! TGATATAGAAAAAGTTGTGT+AGG - chr8_3:1655694-1655713 Msa1268590:intron 25.0%
! AAATTTAGGTATTCTTGTAC+TGG - chr8_3:1655865-1655884 Msa1268590:intron 25.0%
! TGAGAACAAAGAATAAAACA+AGG - chr8_3:1655941-1655960 Msa1268590:intron 25.0%
!! CATAAGTTAGTTAATTTTGG+TGG + chr8_3:1656058-1656077 None:intergenic 25.0%
!! TGATAAAATAGTCCATCTTT+TGG + chr8_3:1656224-1656243 None:intergenic 25.0%
!! TTACAATTAACTGTCATTTG+AGG + chr8_3:1656559-1656578 None:intergenic 25.0%
! TCAAATGACAGTTAATTGTA+AGG - chr8_3:1656558-1656577 Msa1268590:CDS 25.0%
! TATTGGCAAAATGAAAACAT+AGG + chr8_3:1656784-1656803 None:intergenic 25.0%
! TTTGCCAATATGTTAATTCA+TGG - chr8_3:1656794-1656813 Msa1268590:intron 25.0%
! TTGCCAATATGTTAATTCAT+GGG - chr8_3:1656795-1656814 Msa1268590:intron 25.0%
! GATAGATATTAACAACTCAT+AGG + chr8_3:1657149-1657168 None:intergenic 25.0%
! AAGTTACTGAATACTTTCAT+GGG - chr8_3:1657722-1657741 Msa1268590:CDS 25.0%
!! GAGAGATTTTCTAAACATTT+TGG - chr8_3:1657792-1657811 Msa1268590:CDS 25.0%
! TTTGTATTCACAATACTAAG+GGG + chr8_3:1657965-1657984 None:intergenic 25.0%
! ATTCACATCATTAAAATGTG+TGG + chr8_3:1658329-1658348 None:intergenic 25.0%
! TTTCAATGATTCTAATGTAC+TGG + chr8_3:1658463-1658482 None:intergenic 25.0%
AGAAAAGAGGAAACTTCTTT+CGG + chr8_3:1653395-1653414 None:intergenic 30.0%
GCAAAATTCATGTCTGAATT+TGG + chr8_3:1653469-1653488 None:intergenic 30.0%
ATGTTGAAGCTTGAATTATG+AGG + chr8_3:1653521-1653540 None:intergenic 30.0%
GAAGATGATGAAGATTATGA+TGG + chr8_3:1653546-1653565 None:intergenic 30.0%
ACGGAATTCAGTTTATGATA+CGG + chr8_3:1654124-1654143 None:intergenic 30.0%
GAAGAAAGAAAGTAATTCGA+CGG - chr8_3:1654375-1654394 Msa1268590:CDS 30.0%
TGTTGAAGAAGCTAATGAAA+CGG - chr8_3:1654897-1654916 Msa1268590:CDS 30.0%
! GAAACGAGCTTGATTTTATT+TGG + chr8_3:1654999-1655018 None:intergenic 30.0%
! TTTCTAACACCTTGTTCTTT+TGG + chr8_3:1655207-1655226 None:intergenic 30.0%
! GCTATATTTTGTGACTTCTT+AGG + chr8_3:1655273-1655292 None:intergenic 30.0%
! ACTTCATTCTTTTCCCTTTT+TGG - chr8_3:1655362-1655381 Msa1268590:intron 30.0%
GCAAGTATAAACTCCAAAAA+GGG + chr8_3:1655378-1655397 None:intergenic 30.0%
AGCAAGTATAAACTCCAAAA+AGG + chr8_3:1655379-1655398 None:intergenic 30.0%
AGTCGAACTTCATATTACTA+AGG + chr8_3:1655546-1655565 None:intergenic 30.0%
GACAAACAATTGTTTCACTT+TGG - chr8_3:1655584-1655603 Msa1268590:intron 30.0%
ATAGAAAAAGTTGTGTAGGA+AGG - chr8_3:1655698-1655717 Msa1268590:intron 30.0%
TAGAAAAAGTTGTGTAGGAA+GGG - chr8_3:1655699-1655718 Msa1268590:intron 30.0%
! TTTAAGAGAGGTGCAAATTT+AGG - chr8_3:1655851-1655870 Msa1268590:intron 30.0%
GTACTGGAAATTTCAAATTG+TGG - chr8_3:1655881-1655900 Msa1268590:intron 30.0%
CTTATGTTCCTTAACAACTT+AGG - chr8_3:1656072-1656091 Msa1268590:intron 30.0%
AGAATGCATAGATGATGATT+TGG + chr8_3:1656189-1656208 None:intergenic 30.0%
TTGATTCTTATATCAGCTGA+GGG - chr8_3:1656318-1656337 Msa1268590:intron 30.0%
TGTGTGGATGTCTAAATATA+TGG - chr8_3:1656460-1656479 Msa1268590:intron 30.0%
GTAACGTGATTTATCTGTTA+AGG + chr8_3:1656523-1656542 None:intergenic 30.0%
TGCCAATATGTTAATTCATG+GGG - chr8_3:1656796-1656815 Msa1268590:intron 30.0%
TTTATCTCTTCCTCTTTAGT+AGG + chr8_3:1656900-1656919 None:intergenic 30.0%
! CAACTCTTTTGAATGCAAAA+GGG + chr8_3:1656995-1657014 None:intergenic 30.0%
! TCAACTCTTTTGAATGCAAA+AGG + chr8_3:1656996-1657015 None:intergenic 30.0%
TCAAGAGATCAAAGATAACA+AGG + chr8_3:1657108-1657127 None:intergenic 30.0%
ACAGGAAATAGAATGAATGT+TGG - chr8_3:1657238-1657257 Msa1268590:CDS 30.0%
CTGAAACTCGTAGATATAAA+GGG - chr8_3:1657304-1657323 Msa1268590:CDS 30.0%
AAACTCTTCCTCGTTAAATT+TGG + chr8_3:1657437-1657456 None:intergenic 30.0%
GTATTTCAAAAAGAGCTTTG+TGG + chr8_3:1657641-1657660 None:intergenic 30.0%
AGAAGAAATTGTGAGGATTA+AGG - chr8_3:1657666-1657685 Msa1268590:CDS 30.0%
ATTCAGTAACTTCTTTCACA+AGG + chr8_3:1657714-1657733 None:intergenic 30.0%
GAAGTTACTGAATACTTTCA+TGG - chr8_3:1657721-1657740 Msa1268590:CDS 30.0%
!!! ACTTTCACTGTTATTTTGAG+AGG + chr8_3:1658000-1658019 None:intergenic 30.0%
TTGCAAATTTGAACTCTCAT+TGG - chr8_3:1658031-1658050 Msa1268590:CDS 30.0%
TGCAAATTTGAACTCTCATT+GGG - chr8_3:1658032-1658051 Msa1268590:CDS 30.0%
! ACTTTTGCTACTAGTGAAAT+GGG + chr8_3:1658064-1658083 None:intergenic 30.0%
AAACATTAAATGCATGTTCG+TGG - chr8_3:1658116-1658135 Msa1268590:CDS 30.0%
!! CTATAGCATACGTATTTTAG+TGG + chr8_3:1658272-1658291 None:intergenic 30.0%
ACGTATGCTATAGTCAAAAT+AGG - chr8_3:1658279-1658298 Msa1268590:CDS 30.0%
!!! AATGTTTTGGTTTACGTAAG+AGG - chr8_3:1658346-1658365 Msa1268590:five_prime_UTR 30.0%
GCTTGAATTATGAGGTTTCA+TGG + chr8_3:1653513-1653532 None:intergenic 35.0%
! TCTTCTTGTGTGATGATGAT+CGG + chr8_3:1653618-1653637 None:intergenic 35.0%
ATGGAAGAATGGAATGTTGT+TGG + chr8_3:1653726-1653745 None:intergenic 35.0%
TCTGGATATTCATGGAAGAA+TGG + chr8_3:1653737-1653756 None:intergenic 35.0%
GTTGTAGCGTTAGAAGTTAA+CGG + chr8_3:1653791-1653810 None:intergenic 35.0%
! ACTTTCTTTGTTCCTTTTGC+TGG + chr8_3:1653836-1653855 None:intergenic 35.0%
TTCATCAAATTCATCTGCTC+CGG - chr8_3:1654000-1654019 Msa1268590:CDS 35.0%
AGAAAATTCGAAGCTACTAC+CGG + chr8_3:1654022-1654041 None:intergenic 35.0%
! GCTTCGAATTTTCTCTACAT+TGG - chr8_3:1654028-1654047 Msa1268590:CDS 35.0%
! TTTTCTCTACATTGGAACTG+TGG - chr8_3:1654036-1654055 Msa1268590:CDS 35.0%
TCAGTTTATGATACGGTGAA+CGG + chr8_3:1654117-1654136 None:intergenic 35.0%
GAATTACTTTCTTTCTTCGC+CGG + chr8_3:1654373-1654392 None:intergenic 35.0%
GAAAGAGCAGATTTCGATTT+CGG + chr8_3:1654433-1654452 None:intergenic 35.0%
CGAATTCTTCTGCATCTATA+AGG - chr8_3:1654767-1654786 Msa1268590:intron 35.0%
ATTCTTCTGCATCTATAAGG+AGG - chr8_3:1654770-1654789 Msa1268590:CDS 35.0%
TCTATAAGGAGGTTAAGTGA+AGG - chr8_3:1654781-1654800 Msa1268590:CDS 35.0%
!! TCTGTTGGTAGTGTAAGAAA+AGG - chr8_3:1654811-1654830 Msa1268590:CDS 35.0%
CAATGCAATGCTTTCAACTT+CGG + chr8_3:1654934-1654953 None:intergenic 35.0%
!! GAAGTTGAAAGCATTGCATT+GGG - chr8_3:1654933-1654952 Msa1268590:CDS 35.0%
! GATATGATGGAGTCTTTGTT+TGG - chr8_3:1655150-1655169 Msa1268590:intron 35.0%
! TCTTTGTTTGGTTGCAACAA+TGG - chr8_3:1655162-1655181 Msa1268590:intron 35.0%
!!! ACACCTTGTTCTTTTGGTTT+TGG + chr8_3:1655201-1655220 None:intergenic 35.0%
TTGTTCTCATGATCAACAGA+AGG + chr8_3:1655240-1655259 None:intergenic 35.0%
TTCTGTTGATCATGAGAACA+AGG - chr8_3:1655239-1655258 Msa1268590:intron 35.0%
!!! TGAAGTTTCTGAAGCTCTTT+TGG - chr8_3:1655326-1655345 Msa1268590:intron 35.0%
!!! TACTAAGGTCCTTTTTTCCT+AGG + chr8_3:1655531-1655550 None:intergenic 35.0%
GTATTAGTCATAGAGAAGCA+TGG - chr8_3:1655728-1655747 Msa1268590:intron 35.0%
ACATGTGTGATGATTCAGTA+TGG - chr8_3:1655785-1655804 Msa1268590:intron 35.0%
GTTCTCAAGTACATTGTATG+AGG + chr8_3:1655928-1655947 None:intergenic 35.0%
GTTCCTTAACAACTTAGGTT+TGG - chr8_3:1656077-1656096 Msa1268590:intron 35.0%
AAGCCAAACCTAAGTTGTTA+AGG + chr8_3:1656083-1656102 None:intergenic 35.0%
GGATATATCATCTGTGATCA+CGG + chr8_3:1656168-1656187 None:intergenic 35.0%
!! CCATCTTTTGGATTAGAACA+TGG + chr8_3:1656212-1656231 None:intergenic 35.0%
CCATGTTCTAATCCAAAAGA+TGG - chr8_3:1656209-1656228 Msa1268590:intron 35.0%
CTCAGCTGATATAAGAATCA+AGG + chr8_3:1656319-1656338 None:intergenic 35.0%
CTTGATTCTTATATCAGCTG+AGG - chr8_3:1656317-1656336 Msa1268590:intron 35.0%
TGATTCTTATATCAGCTGAG+GGG - chr8_3:1656319-1656338 Msa1268590:intron 35.0%
! CAATTAACTGTCATTTGAGG+TGG + chr8_3:1656556-1656575 None:intergenic 35.0%
ATAGGATGCAAATAAGCGAT+TGG + chr8_3:1656766-1656785 None:intergenic 35.0%
GCCAATATGTTAATTCATGG+GGG - chr8_3:1656797-1656816 Msa1268590:intron 35.0%
ACCCCCATGAATTAACATAT+TGG + chr8_3:1656801-1656820 None:intergenic 35.0%
AATATGTTAATTCATGGGGG+TGG - chr8_3:1656800-1656819 Msa1268590:intron 35.0%
ATTGGAAACCCTAGTAAAGA+TGG - chr8_3:1656872-1656891 Msa1268590:CDS 35.0%
!! GCTTTAAGAAATCTTTCTGC+AGG + chr8_3:1656960-1656979 None:intergenic 35.0%
AGTTGAAGCTATGCTATACA+GGG - chr8_3:1657010-1657029 Msa1268590:CDS 35.0%
! GTTGATTTCTGAATCGAAGT+TGG + chr8_3:1657036-1657055 None:intergenic 35.0%
GTTGTTAATATCTATCTGCC+AGG - chr8_3:1657153-1657172 Msa1268590:CDS 35.0%
ATGAATGTTGGTACTAATCG+AGG - chr8_3:1657250-1657269 Msa1268590:CDS 35.0%
CCTTTATATCTACGAGTTTC+AGG + chr8_3:1657306-1657325 None:intergenic 35.0%
CCTGAAACTCGTAGATATAA+AGG - chr8_3:1657303-1657322 Msa1268590:CDS 35.0%
GTAGATATAAAGGGAACAGA+TGG - chr8_3:1657313-1657332 Msa1268590:CDS 35.0%
! AATTTGGAGTCCATTTGGTT+GGG + chr8_3:1657421-1657440 None:intergenic 35.0%
! AAATTTGGAGTCCATTTGGT+TGG + chr8_3:1657422-1657441 None:intergenic 35.0%
! CGTTAAATTTGGAGTCCATT+TGG + chr8_3:1657426-1657445 None:intergenic 35.0%
! AATGGACTCCAAATTTAACG+AGG - chr8_3:1657426-1657445 Msa1268590:CDS 35.0%
GAGGAAGAGTTTAAGAAGAA+CGG - chr8_3:1657445-1657464 Msa1268590:CDS 35.0%
!!! CTGCTTTTTTGACATTACCA+AGG + chr8_3:1657501-1657520 None:intergenic 35.0%
CTACGTTACAAAGCTTGAAA+CGG - chr8_3:1657549-1657568 Msa1268590:CDS 35.0%
TACGTTACAAAGCTTGAAAC+GGG - chr8_3:1657550-1657569 Msa1268590:CDS 35.0%
TATGAGAAACCAGATATGAG+AGG - chr8_3:1657601-1657620 Msa1268590:CDS 35.0%
AAGAAATTGCCTCTCATATC+TGG + chr8_3:1657613-1657632 None:intergenic 35.0%
!! GATTTGGTTTGCAAAGAAGT+TGG - chr8_3:1657814-1657833 Msa1268590:CDS 35.0%
AGGATGCATGATAGAATTGT+TGG - chr8_3:1657838-1657857 Msa1268590:CDS 35.0%
ATGCATGATAGAATTGTTGG+TGG - chr8_3:1657841-1657860 Msa1268590:CDS 35.0%
CTGTTCTTAACAGGTACAAT+GGG - chr8_3:1657905-1657924 Msa1268590:CDS 35.0%
! CACTTTTGCTACTAGTGAAA+TGG + chr8_3:1658065-1658084 None:intergenic 35.0%
TTCACTAGTAGCAAAAGTGA+AGG - chr8_3:1658066-1658085 Msa1268590:CDS 35.0%
!! TTGCTGTTTGATCTCAATGA+AGG + chr8_3:1658096-1658115 None:intergenic 35.0%
ATTAAATGCATGTTCGTGGT+GGG - chr8_3:1658120-1658139 Msa1268590:CDS 35.0%
ATATACCTCCCATTTGAATG+AGG + chr8_3:1658225-1658244 None:intergenic 35.0%
AATGGAGAGAGAGAGAAAAG+AGG + chr8_3:1653408-1653427 None:intergenic 40.0%
AATGGAATGTTGTTGGAGGA+AGG + chr8_3:1653719-1653738 None:intergenic 40.0%
GAAGAATGGAATGTTGTTGG+AGG + chr8_3:1653723-1653742 None:intergenic 40.0%
TCCTAACGTTACGATTCCAA+CGG + chr8_3:1653873-1653892 None:intergenic 40.0%
CGTAACGTTAGGAATGTTGT+CGG - chr8_3:1653880-1653899 Msa1268590:exon 40.0%
AAGAGAATTGTTCCTCTGTG+TGG + chr8_3:1653975-1653994 None:intergenic 40.0%
TTATGATACGGTGAACGGTT+AGG + chr8_3:1654112-1654131 None:intergenic 40.0%
TTTGGAGGTTTACTTAACGG+CGG + chr8_3:1654193-1654212 None:intergenic 40.0%
CCGTTTGGAGGTTTACTTAA+CGG + chr8_3:1654196-1654215 None:intergenic 40.0%
CCGTTAAGTAAACCTCCAAA+CGG - chr8_3:1654193-1654212 Msa1268590:CDS 40.0%
! CGTTTCGTTACTTTCTTCGT+CGG + chr8_3:1654254-1654273 None:intergenic 40.0%
CGACGAAGAAAGTAACGAAA+CGG - chr8_3:1654252-1654271 Msa1268590:CDS 40.0%
TGACTTACCGAAGAATTCTG+CGG + chr8_3:1654289-1654308 None:intergenic 40.0%
! GTTCTTTTCGATTTCGGAAG+CGG + chr8_3:1654406-1654425 None:intergenic 40.0%
! GGCGAAGTTCTTTTCGATTT+CGG + chr8_3:1654412-1654431 None:intergenic 40.0%
! ATGATGACGTGTCGAATATC+AGG + chr8_3:1654466-1654485 None:intergenic 40.0%
TCTTGAATGTCCTACTCCAT+CGG + chr8_3:1654551-1654570 None:intergenic 40.0%
GATTGAAGATGCGCCAAATT+CGG + chr8_3:1654604-1654623 None:intergenic 40.0%
!! ACTGATTTTCGTGTCATTGG+AGG + chr8_3:1654727-1654746 None:intergenic 40.0%
!!! GACACTGATTTTCGTGTCAT+TGG + chr8_3:1654730-1654749 None:intergenic 40.0%
ATAAGGAGGTTAAGTGAAGG+AGG - chr8_3:1654784-1654803 Msa1268590:CDS 40.0%
! ATTTGAGATCTTCTTCCGAG+AGG - chr8_3:1654872-1654891 Msa1268590:CDS 40.0%
GAAGAAGCTAATGAAACGGA+AGG - chr8_3:1654901-1654920 Msa1268590:CDS 40.0%
!! CGAAGTTGAAAGCATTGCAT+TGG - chr8_3:1654932-1654951 Msa1268590:CDS 40.0%
GCTCCAAAACCAAAAGAACA+AGG - chr8_3:1655195-1655214 Msa1268590:intron 40.0%
!!! GTTTCTGAAGCTCTTTTGGA+TGG - chr8_3:1655330-1655349 Msa1268590:intron 40.0%
! CATACAAATTGGGGTGTCTA+TGG - chr8_3:1655450-1655469 Msa1268590:intron 40.0%
!!! CTTTTTTCCTAGGAATCGGA+GGG + chr8_3:1655521-1655540 None:intergenic 40.0%
!!! GGTCCTTTTTTCCTAGGAAT+CGG + chr8_3:1655525-1655544 None:intergenic 40.0%
! TACATTGTATGAGGTGGACT+TGG + chr8_3:1655919-1655938 None:intergenic 40.0%
CTCAAGTACATTGTATGAGG+TGG + chr8_3:1655925-1655944 None:intergenic 40.0%
!!! AGGTTTGGCTTTTTGCTCTA+AGG - chr8_3:1656092-1656111 Msa1268590:intron 40.0%
!!! GGTTTGGCTTTTTGCTCTAA+GGG - chr8_3:1656093-1656112 Msa1268590:intron 40.0%
AGTAGACTGTAAGGGAAGTT+AGG + chr8_3:1656359-1656378 None:intergenic 40.0%
TAACTTCCCTTACAGTCTAC+TGG - chr8_3:1656358-1656377 Msa1268590:intron 40.0%
CAACAACCAGTAGACTGTAA+GGG + chr8_3:1656367-1656386 None:intergenic 40.0%
! TTAACTGTCATTTGAGGTGG+AGG + chr8_3:1656553-1656572 None:intergenic 40.0%
ACATCCAAGTCTAACTGACA+TGG - chr8_3:1656625-1656644 Msa1268590:CDS 40.0%
TTCTCCATGTCAGTTAGACT+TGG + chr8_3:1656632-1656651 None:intergenic 40.0%
! GCAAATAAGCGATTGGTTCA+AGG + chr8_3:1656759-1656778 None:intergenic 40.0%
AGTAGGAGCCATCTTTACTA+GGG + chr8_3:1656883-1656902 None:intergenic 40.0%
TAGTAGGAGCCATCTTTACT+AGG + chr8_3:1656884-1656903 None:intergenic 40.0%
AAAGATGGCTCCTACTAAAG+AGG - chr8_3:1656887-1656906 Msa1268590:CDS 40.0%
GAGTTGAAGCTATGCTATAC+AGG - chr8_3:1657009-1657028 Msa1268590:CDS 40.0%
GAAAGATAGCCATACCTCAA+GGG + chr8_3:1657081-1657100 None:intergenic 40.0%
TGAAAGATAGCCATACCTCA+AGG + chr8_3:1657082-1657101 None:intergenic 40.0%
GTGAGGAATTAAGGAATAGC+CGG - chr8_3:1657182-1657201 Msa1268590:CDS 40.0%
CCAGGAGTTTGAAGAATAAC+CGG + chr8_3:1657204-1657223 None:intergenic 40.0%
TTGTGGTCCAAGAGATCATT+AGG - chr8_3:1657356-1657375 Msa1268590:CDS 40.0%
CTTCAGACCTAATGATCTCT+TGG + chr8_3:1657366-1657385 None:intergenic 40.0%
CAAGAGATCATTAGGTCTGA+AGG - chr8_3:1657364-1657383 Msa1268590:CDS 40.0%
GGTAATGTCAAAAAAGCAGC+AGG - chr8_3:1657502-1657521 Msa1268590:CDS 40.0%
TGTCAAAAAAGCAGCAGGAA+TGG - chr8_3:1657507-1657526 Msa1268590:CDS 40.0%
ACGTTACAAAGCTTGAAACG+GGG - chr8_3:1657551-1657570 Msa1268590:CDS 40.0%
ACGCAGAAGAAGAAATTGTG+AGG - chr8_3:1657659-1657678 Msa1268590:CDS 40.0%
! TGGTTTGCAAAGAAGTTGGA+AGG - chr8_3:1657818-1657837 Msa1268590:CDS 40.0%
TACCTGTTAAGAACAGGCAA+TGG + chr8_3:1657901-1657920 None:intergenic 40.0%
CCATTGTACCTGTTAAGAAC+AGG + chr8_3:1657907-1657926 None:intergenic 40.0%
CCTGTTCTTAACAGGTACAA+TGG - chr8_3:1657904-1657923 Msa1268590:CDS 40.0%
CATTAAATGCATGTTCGTGG+TGG - chr8_3:1658119-1658138 Msa1268590:CDS 40.0%
TTAAATGCATGTTCGTGGTG+GGG - chr8_3:1658121-1658140 Msa1268590:CDS 40.0%
CATACAGTTGAACACTTTCC+TGG - chr8_3:1658157-1658176 Msa1268590:CDS 40.0%
ACTTTCCTGGTTCACTCAAA+TGG - chr8_3:1658170-1658189 Msa1268590:CDS 40.0%
CTTTCCTGGTTCACTCAAAT+GGG - chr8_3:1658171-1658190 Msa1268590:CDS 40.0%
TGCCATTGTCCTCATTCAAA+TGG - chr8_3:1658213-1658232 Msa1268590:CDS 40.0%
GCCATTGTCCTCATTCAAAT+GGG - chr8_3:1658214-1658233 Msa1268590:CDS 40.0%
TCCCATTTGAATGAGGACAA+TGG + chr8_3:1658218-1658237 None:intergenic 40.0%
ATTGTCCTCATTCAAATGGG+AGG - chr8_3:1658217-1658236 Msa1268590:CDS 40.0%
AATTCCTCAGCGGGAAACAA+TGG + chr8_3:1653426-1653445 None:intergenic 45.0%
TTCTTCCGTGAATTCCTCAG+CGG + chr8_3:1653436-1653455 None:intergenic 45.0%
TCGCTGGGAATAATGGTTGA+TGG + chr8_3:1653646-1653665 None:intergenic 45.0%
ATGTTGTTGGAGGAAGGTTG+TGG + chr8_3:1653713-1653732 None:intergenic 45.0%
! GCTGCTTGATTCTGATTCGA+CGG + chr8_3:1653767-1653786 None:intergenic 45.0%
GTAGCTATAGCAATCTCCGT+TGG - chr8_3:1653854-1653873 Msa1268590:three_prime_UTR 45.0%
TCCGTTGGAATCGTAACGTT+AGG - chr8_3:1653869-1653888 Msa1268590:exon 45.0%
ACACAGAGCAAAAAACGCTG+CGG - chr8_3:1653925-1653944 Msa1268590:CDS 45.0%
TAGTGAGTACTTCCACACAG+AGG - chr8_3:1653960-1653979 Msa1268590:CDS 45.0%
GGTCAACGATCAGAATCAAC+CGG - chr8_3:1654081-1654100 Msa1268590:CDS 45.0%
ATTCCGTTAAGCGATCCGAT+CGG - chr8_3:1654137-1654156 Msa1268590:CDS 45.0%
ATACCGATCGGATCGCTTAA+CGG + chr8_3:1654143-1654162 None:intergenic 45.0%
TCCAAACGGAAACATTCCAC+CGG - chr8_3:1654207-1654226 Msa1268590:CDS 45.0%
TCATTCGCCGCAGAATTCTT+CGG - chr8_3:1654279-1654298 Msa1268590:CDS 45.0%
GCAGAATTCTTCGGTAAGTC+AGG - chr8_3:1654288-1654307 Msa1268590:CDS 45.0%
TCTTCGGTAAGTCAGGAAGA+TGG - chr8_3:1654295-1654314 Msa1268590:CDS 45.0%
ACACGCCGTATTCAGTTTCA+CGG - chr8_3:1654323-1654342 Msa1268590:CDS 45.0%
CTCTGCCGTGAAACTGAATA+CGG + chr8_3:1654331-1654350 None:intergenic 45.0%
TTCTCTCAGTAACGGTAGTC+CGG - chr8_3:1654351-1654370 Msa1268590:CDS 45.0%
! GGAGGAGTTTGCTTGATAGA+AGG + chr8_3:1654490-1654509 None:intergenic 45.0%
AAACAGTTAACCTCCTCCGA+TGG - chr8_3:1654532-1654551 Msa1268590:CDS 45.0%
!! GATTTTCGTGTCATTGGAGG+TGG + chr8_3:1654724-1654743 None:intergenic 45.0%
GCAGAAGAATTCGAAACCAC+CGG + chr8_3:1654760-1654779 None:intergenic 45.0%
AGCTTCTTCAACAAGCCTCT+CGG + chr8_3:1654890-1654909 None:intergenic 45.0%
GAAGCTAATGAAACGGAAGG+TGG - chr8_3:1654904-1654923 Msa1268590:CDS 45.0%
! TTCTGATCGTGCTACTGTGT+GGG - chr8_3:1654972-1654991 Msa1268590:CDS 45.0%
!!! CCTTTTTTCCTAGGAATCGG+AGG + chr8_3:1655522-1655541 None:intergenic 45.0%
CCTCCGATTCCTAGGAAAAA+AGG - chr8_3:1655519-1655538 Msa1268590:intron 45.0%
!! AGTTGTGTAGGAAGGGCATT+AGG - chr8_3:1655706-1655725 Msa1268590:intron 45.0%
! GTATGAGGTGGACTTGGATT+TGG + chr8_3:1655913-1655932 None:intergenic 45.0%
ATCACGGCTCTCACTAAACT+AGG + chr8_3:1656152-1656171 None:intergenic 45.0%
CCAACAACCAGTAGACTGTA+AGG + chr8_3:1656368-1656387 None:intergenic 45.0%
! CCTTACAGTCTACTGGTTGT+TGG - chr8_3:1656365-1656384 Msa1268590:intron 45.0%
AATGAAACAGGGAGTCCTGA+AGG - chr8_3:1656834-1656853 Msa1268590:CDS 45.0%
GGGTTTGGAAAGACTTCTTG+AGG + chr8_3:1657061-1657080 None:intergenic 45.0%
GAAGTCTTTCCAAACCCTTG+AGG - chr8_3:1657064-1657083 Msa1268590:CDS 45.0%
CTTTCCAAACCCTTGAGGTA+TGG - chr8_3:1657069-1657088 Msa1268590:CDS 45.0%
ATAGCCATACCTCAAGGGTT+TGG + chr8_3:1657076-1657095 None:intergenic 45.0%
! TTAATTCCTCACTTGCTGCC+TGG + chr8_3:1657174-1657193 None:intergenic 45.0%
AGGCAGCAAGTGAGGAATTA+AGG - chr8_3:1657173-1657192 Msa1268590:CDS 45.0%
CCGGTTATTCTTCAAACTCC+TGG - chr8_3:1657201-1657220 Msa1268590:CDS 45.0%
GACCACATTGCTACACTTTG+TGG - chr8_3:1657339-1657358 Msa1268590:CDS 45.0%
GACCACAAAGTGTAGCAATG+TGG + chr8_3:1657344-1657363 None:intergenic 45.0%
GCAGAAACTGCATCTGCAAA+CGG - chr8_3:1657388-1657407 Msa1268590:CDS 45.0%
! CGGAAGTATACCCAACCAAA+TGG - chr8_3:1657408-1657427 Msa1268590:CDS 45.0%
!! GAAGAACGGATTGCATGTTG+TGG - chr8_3:1657459-1657478 Msa1268590:CDS 45.0%
GATTAAGGCTCATGAGAGAG+AGG - chr8_3:1657681-1657700 Msa1268590:CDS 45.0%
CTTTCATGGGAATGCTGCAA+AGG - chr8_3:1657735-1657754 Msa1268590:CDS 45.0%
CACCATTGCCTGTTCTTAAC+AGG - chr8_3:1657896-1657915 Msa1268590:CDS 45.0%
ACAAGATAGAAGCTCAGACG+AGG - chr8_3:1657930-1657949 Msa1268590:CDS 45.0%
!!! TATTTACTTTTAAAAAATTT+GGG + chr8_3:1656430-1656449 None:intergenic 5.0%
!!! TTATTTACTTTTAAAAAATT+TGG + chr8_3:1656431-1656450 None:intergenic 5.0%
GTTTCCCGCTGAGGAATTCA+CGG - chr8_3:1653428-1653447 Msa1268590:three_prime_UTR 50.0%
TCTTCCGTGAATTCCTCAGC+GGG + chr8_3:1653435-1653454 None:intergenic 50.0%
GCTGTACTCGCTGGGAATAA+TGG + chr8_3:1653653-1653672 None:intergenic 50.0%
TTGTTGGAGGAAGGTTGTGG+TGG + chr8_3:1653710-1653729 None:intergenic 50.0%
GTGGTGCGTCTGGATATTCA+TGG + chr8_3:1653745-1653764 None:intergenic 50.0%
! GCTTGATTCTGATTCGACGG+TGG + chr8_3:1653764-1653783 None:intergenic 50.0%
CGCTACAACAGCGAATCCAA+CGG - chr8_3:1653802-1653821 Msa1268590:three_prime_UTR 50.0%
! TTTGCTGGTTGTGTTGCCGT+TGG + chr8_3:1653821-1653840 None:intergenic 50.0%
ACGGCAACACAACCAGCAAA+AGG - chr8_3:1653821-1653840 Msa1268590:three_prime_UTR 50.0%
GAACTGTGGAACCTTCGAGA+AGG - chr8_3:1654050-1654069 Msa1268590:CDS 50.0%
ACCTTCGAGAAGGTCAACGA+CGG - chr8_3:1654060-1654079 Msa1268590:CDS 50.0%
ATTGGCTGTAACTCCGGACT+CGG + chr8_3:1654169-1654188 None:intergenic 50.0%
GGTTTACTTAACGGCGGCAT+TGG + chr8_3:1654187-1654206 None:intergenic 50.0%
GGTGGAATGTTTCCGTTTGG+AGG + chr8_3:1654208-1654227 None:intergenic 50.0%
CGGCAGAGTTCTCTCAGTAA+CGG - chr8_3:1654343-1654362 Msa1268590:CDS 50.0%
TGTTTCTCCGATAGCTGACG+TGG + chr8_3:1654517-1654536 None:intergenic 50.0%
TTAACCTCCTCCGATGGAGT+AGG - chr8_3:1654538-1654557 Msa1268590:CDS 50.0%
TGAATGTCCTACTCCATCGG+AGG + chr8_3:1654548-1654567 None:intergenic 50.0%
TGAAGATGCGCCAAATTCGG+AGG + chr8_3:1654601-1654620 None:intergenic 50.0%
! TTTCGTGTCATTGGAGGTGG+CGG + chr8_3:1654721-1654740 None:intergenic 50.0%
AAAATCAGTGTCGCCGACAC+CGG - chr8_3:1654738-1654757 Msa1268590:intron 50.0%
GAATTCGAAACCACCGGTGT+CGG + chr8_3:1654754-1654773 None:intergenic 50.0%
AGGAGGTTAAGTGAAGGAGG+TGG - chr8_3:1654787-1654806 Msa1268590:CDS 50.0%
! AGTGAAGGAGGTGGTTCTGT+TGG - chr8_3:1654796-1654815 Msa1268590:CDS 50.0%
! CTTCTGATCGTGCTACTGTG+TGG - chr8_3:1654971-1654990 Msa1268590:CDS 50.0%
GTGTTAACCCTCCGATTCCT+AGG - chr8_3:1655511-1655530 Msa1268590:intron 50.0%
CTGCAGGTCCAAGTTTCGAA+AGG + chr8_3:1656944-1656963 None:intergenic 50.0%
!! CTGTTCTGAGAACAGCTTCC+AGG + chr8_3:1657222-1657241 None:intergenic 50.0%
CTGGAAGCTGTTCTCAGAAC+AGG - chr8_3:1657220-1657239 Msa1268590:CDS 50.0%
!! AACGGATTGCATGTTGTGGC+TGG - chr8_3:1657463-1657482 Msa1268590:CDS 50.0%
! GCTGGTCTCAGTAAAGACCT+TGG - chr8_3:1657481-1657500 Msa1268590:CDS 50.0%
! GGGGCTTGAAAAAGTGCGAT+CGG - chr8_3:1657570-1657589 Msa1268590:CDS 50.0%
GTAGCCCATTTGAGTGAACC+AGG + chr8_3:1658178-1658197 None:intergenic 50.0%
CTCTCCATTGTTTCCCGCTG+AGG - chr8_3:1653419-1653438 Msa1268590:three_prime_UTR 55.0%
!! TTGTGGTGGTGGTGGTGTGA+CGG + chr8_3:1653696-1653715 None:intergenic 55.0%
TTGGAGGAAGGTTGTGGTGG+TGG + chr8_3:1653707-1653726 None:intergenic 55.0%
ACCGTCGTTGACCTTCTCGA+AGG + chr8_3:1654064-1654083 None:intergenic 55.0%
GGTGAACGGTTAGGCTTCTC+CGG + chr8_3:1654103-1654122 None:intergenic 55.0%
GCCGGTGGAATGTTTCCGTT+TGG + chr8_3:1654211-1654230 None:intergenic 55.0%
TCTTCTTCCGACGACATCGC+CGG + chr8_3:1654229-1654248 None:intergenic 55.0%
TTCTCCGATAGCTGACGTGG+CGG + chr8_3:1654514-1654533 None:intergenic 55.0%
ATGTCCTACTCCATCGGAGG+AGG + chr8_3:1654545-1654564 None:intergenic 55.0%
! GGCGGTGGTGCTGAGAATTT+CGG + chr8_3:1654577-1654596 None:intergenic 55.0%
AGATGCGCCAAATTCGGAGG+TGG + chr8_3:1654598-1654617 None:intergenic 55.0%
AACAGGGAGTCCTGAAGGTC+TGG - chr8_3:1656839-1656858 Msa1268590:CDS 55.0%
ACAGGGAGTCCTGAAGGTCT+GGG - chr8_3:1656840-1656859 Msa1268590:CDS 55.0%
!! AGGTCTGGGTGCTGAGCTAT+TGG - chr8_3:1656854-1656873 Msa1268590:CDS 55.0%
GACGGCGACCTTTCGAAACT+TGG - chr8_3:1656933-1656952 Msa1268590:CDS 55.0%
TATCTGCCAGGCAGCAAGTG+AGG - chr8_3:1657165-1657184 Msa1268590:CDS 55.0%
!! GTGGTGGTGCTGTACTCGCT+GGG + chr8_3:1653661-1653680 None:intergenic 60.0%
!! GAGGAAGGTTGTGGTGGTGG+TGG + chr8_3:1653704-1653723 None:intergenic 60.0%
TGATTCGACGGTGGTGCGTC+TGG + chr8_3:1653755-1653774 None:intergenic 60.0%
! CGGACTCGGTCGATACCGAT+CGG + chr8_3:1654155-1654174 None:intergenic 60.0%
!! CGATCGGTATCGACCGAGTC+CGG - chr8_3:1654153-1654172 Msa1268590:CDS 60.0%
!! GGCGGCATTGGCTGTAACTC+CGG + chr8_3:1654175-1654194 None:intergenic 60.0%
CATTCCACCGGCGATGTCGT+CGG - chr8_3:1654219-1654238 Msa1268590:CDS 60.0%
TCCACCGCCACGTCAGCTAT+CGG - chr8_3:1654507-1654526 Msa1268590:CDS 60.0%
ACCACCGCCACCTCCGAATT+TGG - chr8_3:1654588-1654607 Msa1268590:CDS 60.0%
TGCGCCAAATTCGGAGGTGG+CGG + chr8_3:1654595-1654614 None:intergenic 60.0%
AGCTCAGCACCCAGACCTTC+AGG + chr8_3:1656852-1656871 None:intergenic 60.0%
!! GGTGGTGGTGCTGTACTCGC+TGG + chr8_3:1653662-1653681 None:intergenic 65.0%
!! ACGGTGGAGGGTGATGGTGG+TGG + chr8_3:1653677-1653696 None:intergenic 65.0%
! GTGACGGTGGAGGGTGATGG+TGG + chr8_3:1653680-1653699 None:intergenic 65.0%
GGTGTGACGGTGGAGGGTGA+TGG + chr8_3:1653683-1653702 None:intergenic 65.0%
! GGTGGTGGTGTGACGGTGGA+GGG + chr8_3:1653689-1653708 None:intergenic 65.0%
!! TGGTGGTGGTGTGACGGTGG+AGG + chr8_3:1653690-1653709 None:intergenic 65.0%
!! TGGTGGTGGTGGTGTGACGG+TGG + chr8_3:1653693-1653712 None:intergenic 65.0%
TCTTCCGACGACATCGCCGG+TGG + chr8_3:1654226-1654245 None:intergenic 65.0%
GATAGCTGACGTGGCGGTGG+AGG + chr8_3:1654508-1654527 None:intergenic 65.0%
TCCGATAGCTGACGTGGCGG+TGG + chr8_3:1654511-1654530 None:intergenic 65.0%
! GCCAAATTCGGAGGTGGCGG+TGG + chr8_3:1654592-1654611 None:intergenic 65.0%
!! GGTGGTGGTGGTGGAGTAGG+AGG + chr8_3:1654676-1654695 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGAGT+AGG + chr8_3:1654679-1654698 None:intergenic 65.0%
! ATTGGAGGTGGCGGTGGAGG+TGG + chr8_3:1654712-1654731 None:intergenic 65.0%
! GTCATTGGAGGTGGCGGTGG+AGG + chr8_3:1654715-1654734 None:intergenic 65.0%
! CGTGTCATTGGAGGTGGCGG+TGG + chr8_3:1654718-1654737 None:intergenic 65.0%
ATCAGTGTCGCCGACACCGG+TGG - chr8_3:1654741-1654760 Msa1268590:intron 65.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr8_3:1654682-1654701 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr8_3:1654682-1654701 None:intergenic 70.0%
!! GGCGGTGGTGGTGGTGGTGG+TGG + chr8_3:1654691-1654710 None:intergenic 75.0%
!! GGTGGCGGTGGTGGTGGTGG+TGG + chr8_3:1654694-1654713 None:intergenic 75.0%
!! GGAGGTGGCGGTGGTGGTGG+TGG + chr8_3:1654697-1654716 None:intergenic 75.0%
! GGTGGAGGTGGCGGTGGTGG+TGG + chr8_3:1654700-1654719 None:intergenic 75.0%
! GGAGGTGGCGGTGGAGGTGG+CGG + chr8_3:1654709-1654728 None:intergenic 75.0%
!! GGCGGTGGAGGTGGCGGTGG+TGG + chr8_3:1654703-1654722 None:intergenic 80.0%
!! GGTGGCGGTGGAGGTGGCGG+TGG + chr8_3:1654706-1654725 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1653346 1658507 1653346 ID=Msa1268590;Name=Msa1268590
chr8_3 mRNA 1653346 1658507 1653346 ID=Msa1268590-mRNA-1;Parent=Msa1268590;Name=Msa1268590-mRNA-1;_AED=0.00;_eAED=0.00;_QI=166|1|1|1|1|1|4|538|918
chr8_3 exon 1653346 1654678 1653346 ID=Msa1268590-mRNA-1:exon:483;Parent=Msa1268590-mRNA-1
chr8_3 exon 1654768 1655009 1654768 ID=Msa1268590-mRNA-1:exon:482;Parent=Msa1268590-mRNA-1
chr8_3 exon 1656502 1656713 1656502 ID=Msa1268590-mRNA-1:exon:481;Parent=Msa1268590-mRNA-1
chr8_3 exon 1656834 1658507 1656834 ID=Msa1268590-mRNA-1:exon:480;Parent=Msa1268590-mRNA-1
chr8_3 five_prime_UTR 1658342 1658507 1658342 ID=Msa1268590-mRNA-1:five_prime_utr;Parent=Msa1268590-mRNA-1
chr8_3 CDS 1656834 1658341 1656834 ID=Msa1268590-mRNA-1:cds;Parent=Msa1268590-mRNA-1
chr8_3 CDS 1656502 1656713 1656502 ID=Msa1268590-mRNA-1:cds;Parent=Msa1268590-mRNA-1
chr8_3 CDS 1654768 1655009 1654768 ID=Msa1268590-mRNA-1:cds;Parent=Msa1268590-mRNA-1
chr8_3 CDS 1653884 1654678 1653884 ID=Msa1268590-mRNA-1:cds;Parent=Msa1268590-mRNA-1
chr8_3 three_prime_UTR 1653346 1653883 1653346 ID=Msa1268590-mRNA-1:three_prime_utr;Parent=Msa1268590-mRNA-1
Gene Sequence

>Msa1268590

ATGAAACCTCATAATTCAAGCTTCAACATCACCATCATAATCTTCATCATCTTCTTCTTCTTCTCATCACTATCTGTTAACACTGCAAAACGTTTCAATGAATCCGATCATCATCACACAAGAAGAATTCTCCATCAACCATTATTCCCAGCGAGTACAGCACCACCACCATCACCCTCCACCGTCACACCACCACCACCACAACCTTCCTCCAACAACATTCCATTCTTCCATGAATATCCAGACGCACCACCGTCGAATCAGAATCAAGCAGCACCGTTAACTTCTAACGCTACAACAGCGAATCCAACGGCAACACAACCAGCAAAAGGAACAAAGAAAGTAGCTATAGCAATCTCCGTTGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTTTATACAAACACAGAGCAAAAAACGCTGCGGATACACAGAAGCTAGTGAGTACTTCCACACAGAGGAACAATTCTCTTCAAGATTCATCAAATTCATCTGCTCCGGTAGTAGCTTCGAATTTTCTCTACATTGGAACTGTGGAACCTTCGAGAAGGTCAACGACGGTCAACGATCAGAATCAACCGGAGAAGCCTAACCGTTCACCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGACCGAGTCCGGAGTTACAGCCAATGCCGCCGTTAAGTAAACCTCCAAACGGAAACATTCCACCGGCGATGTCGTCGGAAGAAGATTCCGACGAAGAAAGTAACGAAACGGCGTTTCATTCGCCGCAGAATTCTTCGGTAAGTCAGGAAGATGGATTTTACACGCCGTATTCAGTTTCACGGCAGAGTTCTCTCAGTAACGGTAGTCCGGCGAAGAAAGAAAGTAATTCGACGGTTACACCGCTTCCGAAATCGAAAAGAACTTCGCCGAAATCGAAATCTGCTCTTTCTGCTTCTTCTCCTGATATTCGACACGTCATCATTCCTTCTATCAAGCAAACTCCTCCACCGCCACGTCAGCTATCGGAGAAACAGTTAACCTCCTCCGATGGAGTAGGACATTCAAGAAAACCGAAATTCTCAGCACCACCGCCACCTCCGAATTTGGCGCATCTTCAATCAACAACTAATACATTTTCACACGTGTCTAAAACTTCACATAATCATCATCCTCCTACTCCACCACCACCACCACCACCACCACCGCCACCTCCACCGCCACCTCCAATGACACGAAAATCAGTGTCGCCGACACCGGTGGTTTCGAATTCTTCTGCATCTATAAGGAGGTTAAGTGAAGGAGGTGGTTCTGTTGGTAGTGTAAGAAAAGGTTCAGAATCAGTTTCAGATCATGTTGATGAGAGTTTGAATTTGAGATCTTCTTCCGAGAGGCTTGTTGAAGAAGCTAATGAAACGGAAGGTGGAAAACCGAAGTTGAAAGCATTGCATTGGGACAAAGTTCGTGCAACTTCTGATCGTGCTACTGTGTGGGACCAAATAAAATCAAGCTCGTTTCAATTAAATGAAGATATGATGGAGTCTTTGTTTGGTTGCAACAATGGAACAAATTCAGCTCCAAAACCAAAAGAACAAGGTGTTAGAAAATCAGTTCTTCCTTCTGTTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAAAATATAGCTATACTGTTAAGGGCACTGAATGTGACAAGAGATGAAGTTTCTGAAGCTCTTTTGGATGGGAGTCCTGAAGGTCTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTGAAAAACTATGACGGCGACCTTTCGAAACTTGGACCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCATTCAAAAGAGTTGAAGCTATGCTATACAGGGCCAACTTCGATTCAGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTTGAGGCAGCAAGTGAGGAATTAAGGAATAGCCGGTTATTCTTCAAACTCCTGGAAGCTGTTCTCAGAACAGGAAATAGAATGAATGTTGGTACTAATCGAGGTGACGCTAAAGCTTTCAAACTCGACACACTCCTGAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTACACTTTGTGGTCCAAGAGATCATTAGGTCTGAAGGTGCAGAAACTGCATCTGCAAACGGAAGTATACCCAACCAAATGGACTCCAAATTTAACGAGGAAGAGTTTAAGAAGAACGGATTGCATGTTGTGGCTGGTCTCAGTAAAGACCTTGGTAATGTCAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGATCGGTTTTGCAATATGAGAAACCAGATATGAGAGGCAATTTCTTCAACTCCACAAAGCTCTTTTTGAAATACGCAGAAGAAGAAATTGTGAGGATTAAGGCTCATGAGAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCTGCAAAGGAAGAAGCGCACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTTGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCATTCAGAATAGCTTCAAATGCACCATTGCCTGTTCTTAACAGGTACAATGGGAGACAAGATAGAAGCTCAGACGAGGAAAGCTCATCCCCTTAG
Protein sequence

>Msa1268590

MKPHNSSFNITIIIFIIFFFFSSLSVNTAKRFNESDHHHTRRILHQPLFPASTAPPPSPSTVTPPPPQPSSNNIPFFHEYPDAPPSNQNQAAPLTSNATTANPTATQPAKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKNAADTQKLVSTSTQRNNSLQDSSNSSAPVVASNFLYIGTVEPSRRSTTVNDQNQPEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPNGNIPPAMSSEEDSDEESNETAFHSPQNSSVSQEDGFYTPYSVSRQSSLSNGSPAKKESNSTVTPLPKSKRTSPKSKSALSASSPDIRHVIIPSIKQTPPPPRQLSEKQLTSSDGVGHSRKPKFSAPPPPPNLAHLQSTTNTFSHVSKTSHNHHPPTPPPPPPPPPPPPPPPPMTRKSVSPTPVVSNSSASIRRLSEGGGSVGSVRKGSESVSDHVDESLNLRSSSERLVEEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNGTNSAPKPKEQGVRKSVLPSVDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGSPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETASANGSIPNQMDSKFNEEEFKKNGLHVVAGLSKDLGNVKKAAGMDSDVLSSYVTKLETGLEKVRSVLQYEKPDMRGNFFNSTKLFLKYAEEEIVRIKAHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGRQDRSSDEESSSP*