AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400000 MtrunA17_Chr5g0401291 95.956 915 30 4 1 915 1 908 0.0 1759
Msa1400000 MtrunA17_Chr4g0054001 56.397 938 295 24 8 915 4 857 0.0 867
Msa1400000 MtrunA17_Chr7g0249941 58.836 464 175 9 461 915 556 1012 5.75e-162 500
Msa1400000 MtrunA17_Chr8g0347491 50.187 536 193 12 394 895 554 1049 2.83e-139 442
Msa1400000 MtrunA17_Chr1g0192111 54.279 409 170 8 472 873 497 895 2.25e-132 419
Msa1400000 MtrunA17_Chr2g0319201 50.235 426 192 8 459 871 382 800 3.85e-122 391
Msa1400000 MtrunA17_Chr4g0042081 51.196 418 183 9 467 871 527 936 6.63e-119 386
Msa1400000 MtrunA17_Chr4g0023611 46.185 498 209 10 394 871 344 802 5.57e-116 375
Msa1400000 MtrunA17_Chr2g0323071 41.538 520 239 11 388 878 244 727 4.11e-101 333
Msa1400000 MtrunA17_Chr5g0414941 42.459 431 211 10 472 873 414 836 3.22e-93 313
Msa1400000 MtrunA17_Chr8g0364331 36.853 502 259 12 394 872 260 726 1.72e-87 295
Msa1400000 MtrunA17_Chr3g0118231 37.347 490 269 8 394 873 182 643 1.15e-86 291
Msa1400000 MtrunA17_Chr4g0074091 29.630 378 216 10 453 818 773 1112 9.95e-36 147
Msa1400000 MtrunA17_Chr4g0061111 28.022 364 208 11 473 821 1171 1495 6.09e-32 135
Msa1400000 MtrunA17_Chr1g0150261 27.322 366 217 9 465 818 1357 1685 6.37e-32 135
Msa1400000 MtrunA17_Chr5g0409151 26.168 214 127 4 607 818 2 186 1.12e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400000 AT5G67470.1 72.360 445 108 6 464 905 453 885 0.0 634
Msa1400000 AT3G25500.1 61.818 440 150 6 462 895 588 1015 2.32e-172 529
Msa1400000 AT2G43800.1 58.645 428 156 7 465 882 440 856 2.42e-155 479
Msa1400000 AT3G05470.1 51.699 412 176 8 471 871 469 868 2.56e-125 400
Msa1400000 AT5G54650.2 48.394 436 200 6 470 890 440 865 7.70e-113 368
Msa1400000 AT5G54650.1 48.394 436 200 6 470 890 440 865 7.70e-113 368
Msa1400000 AT5G48360.1 51.613 341 134 5 538 872 466 781 1.47e-98 327
Msa1400000 AT1G70140.1 42.155 427 221 8 472 880 305 723 2.84e-92 309
Msa1400000 AT1G59910.1 41.205 415 222 9 470 871 460 865 2.78e-85 293
Msa1400000 AT3G07540.1 41.646 413 184 6 466 871 472 834 8.68e-80 276
Msa1400000 AT1G24150.2 45.540 213 110 3 472 683 312 519 3.81e-47 177
Msa1400000 AT5G58160.1 28.412 359 205 10 472 818 838 1156 2.07e-31 133
Msa1400000 AT5G07740.1 28.784 403 226 15 470 829 1244 1628 3.64e-31 133
Msa1400000 AT5G07740.3 28.784 403 226 15 470 829 1222 1606 4.01e-31 132
Msa1400000 AT4G15200.4 47.973 148 68 4 464 609 321 461 1.02e-30 127
Msa1400000 AT4G15200.2 47.973 148 68 4 464 609 322 462 1.09e-30 127
Msa1400000 AT1G31810.2 26.873 387 234 9 470 845 816 1164 1.60e-30 130
Msa1400000 AT1G31810.1 26.873 387 234 9 470 845 816 1164 1.60e-30 130
Msa1400000 AT3G25493.1 50.909 110 52 1 786 895 30 137 2.19e-29 115
Msa1400000 AT5G07740.2 26.790 433 230 16 470 829 1244 1662 3.38e-27 120
Msa1400000 AT5G07770.3 22.872 376 236 7 473 839 199 529 1.57e-25 113
Msa1400000 AT5G07770.1 22.872 376 236 7 473 839 192 522 1.85e-25 113
Msa1400000 AT5G07770.4 27.413 259 164 5 473 724 58 299 4.34e-25 111
Msa1400000 AT3G32400.2 28.235 255 167 7 470 715 93 340 2.09e-24 108
Msa1400000 AT5G07770.2 23.920 301 198 3 541 839 224 495 2.32e-23 106
Msa1400000 AT5G07760.1 27.397 219 157 2 541 758 523 740 9.24e-23 105
Msa1400000 AT5G07760.2 27.397 219 157 2 541 758 523 740 1.12e-22 105
Msa1400000 AT5G07650.2 31.250 176 121 0 540 715 468 643 1.48e-21 101
Msa1400000 AT2G25050.1 23.238 383 225 11 470 818 742 1089 1.08e-20 99.0
Msa1400000 AT3G32400.1 27.309 249 157 8 470 701 85 326 1.39e-18 90.5
Msa1400000 AT5G07650.1 28.500 200 119 1 540 715 468 667 2.34e-18 90.9
Msa1400000 AT4G15200.3 43.636 110 55 3 464 571 322 426 4.56e-18 88.6
Msa1400000 AT5G07780.1 25.287 261 164 6 470 715 75 319 5.74e-17 85.5

Find 238 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAATTCATGTCTGAATT+TGG 0.144023 tig0022413:+69926 None:intergenic
CCTTTATATCTACGAGTTTC+AGG 0.157132 tig0022413:+66116 None:intergenic
AAACTCTTCCTCGTTAAATT+TGG 0.167753 tig0022413:+65985 None:intergenic
TGAAGTTTCTGAAGCTCTTT+TGG 0.202919 tig0022413:-68075 Msa1400000:CDS
TTTCTAACACCTTGTTCTTT+TGG 0.224439 tig0022413:+68197 None:intergenic
ACCACCGCCACCTCCGAATT+TGG 0.228198 tig0022413:-68804 Msa1400000:CDS
ACAATCATGAAAATTCTTAA+AGG 0.232010 tig0022413:+65650 None:intergenic
CTGTTCTGAGAACAGCTTCC+AGG 0.238609 tig0022413:+66200 None:intergenic
CCTGAAACTCGTAGATATAA+AGG 0.289953 tig0022413:-66116 Msa1400000:CDS
AAGAAATTGCCTCTCATATC+TGG 0.299218 tig0022413:+65809 None:intergenic
GAAAGAGCAGATTTCGATTT+CGG 0.313337 tig0022413:+68962 None:intergenic
CGAATTCTTCTGCATCTATA+AGG 0.316195 tig0022413:-68637 Msa1400000:CDS
TTGCAAATTTGAACTCTCAT+TGG 0.320314 tig0022413:-65388 Msa1400000:three_prime_UTR
ACGTATGCTATAGTCAAAAT+AGG 0.325006 tig0022413:-65140 Msa1400000:three_prime_UTR
GGCGGTGGAGGTGGTGGTGG+TGG 0.325906 tig0022413:+68704 None:intergenic
CACCATTGCCTGTTCTTAAC+AGG 0.326672 tig0022413:-65523 Msa1400000:CDS
TAGTAGGAGCCATCTTTACT+AGG 0.328099 tig0022413:+66538 None:intergenic
CATACAGTTGAACACTTTCC+TGG 0.329821 tig0022413:-65262 Msa1400000:three_prime_UTR
AGGCAGCAAGTGAGGAATTA+AGG 0.331528 tig0022413:-66246 Msa1400000:CDS
GGTGGAGGTGGTGGTGGTGG+TGG 0.333560 tig0022413:+68707 None:intergenic
GGTGGCGGTGGAGGTGGTGG+TGG 0.334944 tig0022413:+68701 None:intergenic
ACTTTCCTGGTTCACTCAAA+TGG 0.337820 tig0022413:-65249 Msa1400000:three_prime_UTR
TTGTGGTCCAAGAGATCATT+AGG 0.342540 tig0022413:-66063 Msa1400000:CDS
AGAAGAAATTGTGAGGATTA+AGG 0.351806 tig0022413:-65753 Msa1400000:CDS
AGCTCAGCACCCAGACCTTC+AGG 0.352759 tig0022413:+66570 None:intergenic
TTTATCTCTTCCTCTTTAGT+AGG 0.353661 tig0022413:+66522 None:intergenic
AAAATATAGCTATACTGTTA+AGG 0.357268 tig0022413:-68118 Msa1400000:CDS
GGAGGTGGCGGTGGAGGTGG+TGG 0.357279 tig0022413:+68698 None:intergenic
TGATTCGACGGTGGTGCGTC+TGG 0.362482 tig0022413:+69640 None:intergenic
CGTTAAATTTGGAGTCCATT+TGG 0.363903 tig0022413:+65996 None:intergenic
GACGGCGACCTTTCGAAACT+TGG 0.364098 tig0022413:-66486 Msa1400000:CDS
GAAGTTACTGAATACTTTCA+TGG 0.364864 tig0022413:-65698 Msa1400000:CDS
AACAGGGAGTCCTGAAGGTC+TGG 0.371619 tig0022413:-66580 Msa1400000:intron
TGCAAATTTGAACTCTCATT+GGG 0.373007 tig0022413:-65387 Msa1400000:three_prime_UTR
CCGTTTGGAGGTTTACTTAA+CGG 0.379088 tig0022413:+69199 None:intergenic
TGCCATTGTCCTCATTCAAA+TGG 0.385400 tig0022413:-65206 Msa1400000:three_prime_UTR
GGCGGTGGTGCTGAGAATTT+CGG 0.385880 tig0022413:+68818 None:intergenic
ATGATGACGTGTCGAATATC+AGG 0.389397 tig0022413:+68929 None:intergenic
GACCACATTGCTACACTTTG+TGG 0.390580 tig0022413:-66080 Msa1400000:CDS
GAGTTGAAGCTATGCTATAC+AGG 0.393201 tig0022413:-66410 Msa1400000:CDS
GCCGGTGGAATGTTTCCGTT+TGG 0.394668 tig0022413:+69184 None:intergenic
GATTGAAGATGCGCCAAATT+CGG 0.397654 tig0022413:+68791 None:intergenic
TCGGAGGAAGGTTGTGGTGG+TGG 0.398806 tig0022413:+69688 None:intergenic
TACGTTACAAAGCTTGAAAC+GGG 0.399392 tig0022413:-65869 Msa1400000:CDS
GGTGGTGGTGTGACGGTGGA+GGG 0.403927 tig0022413:+69706 None:intergenic
GTCATTGGAGGTGGCGGTGG+AGG 0.407110 tig0022413:+68692 None:intergenic
CCGGTTATTCTTCAAACTCC+TGG 0.408210 tig0022413:-66218 Msa1400000:CDS
ATTGGAGGTGGCGGTGGAGG+TGG 0.413991 tig0022413:+68695 None:intergenic
CCAGGAGTTTGAAGAATAAC+CGG 0.416902 tig0022413:+66218 None:intergenic
TTTCAATGATTCTAATGTAC+TGG 0.418156 tig0022413:+64959 None:intergenic
GGAGGAGTTTGCTTGATAGA+AGG 0.418877 tig0022413:+68905 None:intergenic
AGAAAAGAGGAAACTTCTTT+CGG 0.420368 tig0022413:+69998 None:intergenic
ATAGCCATACCTCAAGGGTT+TGG 0.421616 tig0022413:+66346 None:intergenic
ATACCGATCGGATCGCTTAA+CGG 0.423288 tig0022413:+69252 None:intergenic
GATATGATGGAGTCTTTGTT+TGG 0.423986 tig0022413:-68251 Msa1400000:CDS
CTGGAAGCTGTTCTCAGAAC+AGG 0.424510 tig0022413:-66199 Msa1400000:CDS
TGGTGGTGGTGTGACGGTGG+AGG 0.425651 tig0022413:+69705 None:intergenic
GGTGGTGGTGCTGTACTCGC+TGG 0.429739 tig0022413:+69733 None:intergenic
CTTTCCTGGTTCACTCAAAT+GGG 0.429777 tig0022413:-65248 Msa1400000:three_prime_UTR
CGTGTCATTGGAGGTGGCGG+TGG 0.432189 tig0022413:+68689 None:intergenic
CTTCAGACCTAATGATCTCT+TGG 0.432622 tig0022413:+66056 None:intergenic
CAATGCAATGCTTTCAACTT+CGG 0.435102 tig0022413:+68470 None:intergenic
CTGAAACTCGTAGATATAAA+GGG 0.436598 tig0022413:-66115 Msa1400000:CDS
TCATTCGCCGCAGAATTCTT+CGG 0.436758 tig0022413:-69113 Msa1400000:CDS
GGTGTGACGGTGGAGGGTGA+TGG 0.437575 tig0022413:+69712 None:intergenic
AAATATAGCTATACTGTTAA+GGG 0.440267 tig0022413:-68117 Msa1400000:CDS
CAATCATGAAAATTCTTAAA+GGG 0.441745 tig0022413:+65651 None:intergenic
GCTTGAATTATGAGGTTTCA+TGG 0.443793 tig0022413:+69882 None:intergenic
GAGGAAGGTTGTGGTGGTGG+TGG 0.447130 tig0022413:+69691 None:intergenic
GGTTTACTTAACGGCGGCAT+TGG 0.447145 tig0022413:+69208 None:intergenic
GATTTGGTTTGCAAAGAAGT+TGG 0.447424 tig0022413:-65605 Msa1400000:CDS
GCCAAATTCGGAGGTGGCGG+TGG 0.451685 tig0022413:+68803 None:intergenic
GGCGGCATTGGCTGTAACTC+CGG 0.453098 tig0022413:+69220 None:intergenic
GGTGGTGGTGGTGGAGTAGG+AGG 0.453954 tig0022413:+68719 None:intergenic
GTTGTAGCGTTAGAAGTTAA+CGG 0.455696 tig0022413:+69604 None:intergenic
GCTGTACTCGCTGGGAATAA+TGG 0.457255 tig0022413:+69742 None:intergenic
TCGCTGGGAATAATGGTTGA+TGG 0.458107 tig0022413:+69749 None:intergenic
AGGTCTGGGTGCTGAGCTAT+TGG 0.458304 tig0022413:-66565 Msa1400000:CDS
CTACGTTACAAAGCTTGAAA+CGG 0.460088 tig0022413:-65870 Msa1400000:CDS
TAGATTAAATGAAGATATGA+TGG 0.461193 tig0022413:-68264 Msa1400000:CDS
AATTTGGAGTCCATTTGGTT+GGG 0.463510 tig0022413:+66001 None:intergenic
CGAAGTTGAAAGCATTGCAT+TGG 0.466382 tig0022413:-68469 Msa1400000:CDS
GATAGCTGACGTGGCGGTGG+AGG 0.466571 tig0022413:+68887 None:intergenic
GCAGAATTCTTCGGTAAGTC+AGG 0.467099 tig0022413:-69104 Msa1400000:CDS
TTCTCTCAGTAACGGTAGTC+CGG 0.470525 tig0022413:-69041 Msa1400000:CDS
GCTTTAAGAAATCTTTCTGC+AGG 0.474915 tig0022413:+66462 None:intergenic
TGGTGGTGGTGGTGTGACGG+TGG 0.478764 tig0022413:+69702 None:intergenic
CGGAAGTATACCCAACCAAA+TGG 0.480730 tig0022413:-66011 Msa1400000:CDS
GTGACGGTGGAGGGTGATGG+TGG 0.483527 tig0022413:+69715 None:intergenic
CCATTGTACCTGTTAAGAAC+AGG 0.485981 tig0022413:+65515 None:intergenic
TTATGATACGGTGAACGGTT+AGG 0.486732 tig0022413:+69283 None:intergenic
CTGTTCTTAACAGGTACAAT+GGG 0.486759 tig0022413:-65514 Msa1400000:CDS
CGATCGGTATCGACCGAGTC+CGG 0.487968 tig0022413:-69239 Msa1400000:CDS
AAATTTGGAGTCCATTTGGT+TGG 0.488244 tig0022413:+66000 None:intergenic
TTGCTGTTTGATCTCAATGA+AGG 0.488965 tig0022413:+65326 None:intergenic
CTCTCCATTGTTTCCCGCTG+AGG 0.489398 tig0022413:-69973 Msa1400000:five_prime_UTR
TCTTTGTTTGGTTGCAACAA+TGG 0.489490 tig0022413:-68239 Msa1400000:CDS
GGTGGAATGTTTCCGTTTGG+AGG 0.490417 tig0022413:+69187 None:intergenic
TCCGATAGCTGACGTGGCGG+TGG 0.492256 tig0022413:+68884 None:intergenic
ACGGTGGAGGGTGATGGTGG+TGG 0.492714 tig0022413:+69718 None:intergenic
ATTGGAAACCCTAGTAAAGA+TGG 0.492944 tig0022413:-66547 Msa1400000:CDS
AGTGAAGGAGGTGGTTCTGT+TGG 0.496844 tig0022413:-68608 Msa1400000:CDS
TTCATCAAATTCATCTGCTC+CGG 0.498145 tig0022413:-69392 Msa1400000:CDS
ACACGCCGTATTCAGTTTCA+CGG 0.499766 tig0022413:-69069 Msa1400000:CDS
ACGGCAACACAACCAGCAAA+AGG 0.504839 tig0022413:-69571 Msa1400000:CDS
AATGGAATGTTGTCGGAGGA+AGG 0.505992 tig0022413:+69676 None:intergenic
GAAGTTGAAAGCATTGCATT+GGG 0.508504 tig0022413:-68468 Msa1400000:CDS
AGTAGGAGCCATCTTTACTA+GGG 0.508791 tig0022413:+66539 None:intergenic
TCCGTTGGAATCGTAACGTT+AGG 0.508832 tig0022413:-69523 Msa1400000:CDS
ATGGAAGAATGGAATGTTGT+CGG 0.509887 tig0022413:+69669 None:intergenic
TTTGCTGGTTGTGTTGCCGT+TGG 0.510570 tig0022413:+69574 None:intergenic
TCTGTTGGTAGTGTAAGAAA+AGG 0.511081 tig0022413:-68593 Msa1400000:CDS
TCTTGAATGTCCTACTCCAT+CGG 0.512217 tig0022413:+68844 None:intergenic
GTGGTGCGTCTGGATATTCA+TGG 0.512799 tig0022413:+69650 None:intergenic
AGCTTCTTCAACAAGCCTCT+CGG 0.512915 tig0022413:+68514 None:intergenic
GCCATTGTCCTCATTCAAAT+GGG 0.513310 tig0022413:-65205 Msa1400000:three_prime_UTR
GTTGATTTCTGAATCGAAGT+TGG 0.517873 tig0022413:+66386 None:intergenic
ATTGGCTGTAACTCCGGACT+CGG 0.520143 tig0022413:+69226 None:intergenic
TGGTATAAACATTAAAATGT+AGG 0.520292 tig0022413:+64979 None:intergenic
TCTTCGGTAAGTCAGGAAGA+TGG 0.523226 tig0022413:-69097 Msa1400000:CDS
TGCGCCAAATTCGGAGGTGG+CGG 0.523422 tig0022413:+68800 None:intergenic
GGTGAACGGTTAGGCTTCTC+CGG 0.524180 tig0022413:+69292 None:intergenic
GTTTCCCGCTGAGGAATTCA+CGG 0.524837 tig0022413:-69964 Msa1400000:five_prime_UTR
AACGGATTGCATGTTGTGGC+TGG 0.524954 tig0022413:-65956 Msa1400000:CDS
CGTTTCGTTACTTTCTTCGT+CGG 0.526269 tig0022413:+69141 None:intergenic
ATTAAATGCATGTTCGTGGT+GGG 0.527872 tig0022413:-65299 Msa1400000:three_prime_UTR
TCTTCTTGTGTGATGATGAT+CGG 0.529598 tig0022413:+69777 None:intergenic
ACGGAATTCAGTTTATGATA+CGG 0.530304 tig0022413:+69271 None:intergenic
AGAAAATTCGAAGCTACTAC+CGG 0.531207 tig0022413:+69373 None:intergenic
GAATTACTTTCTTTCTTCGC+CGG 0.531635 tig0022413:+69022 None:intergenic
ATAAGGAGGTTAAGTGAAGG+AGG 0.533192 tig0022413:-68620 Msa1400000:CDS
CTTTCATGGGAATGCTGCAA+AGG 0.533599 tig0022413:-65684 Msa1400000:CDS
TCTGGATATTCATGGAAGAA+TGG 0.534227 tig0022413:+69658 None:intergenic
TGGTTTGCAAAGAAGTTGGA+AGG 0.536182 tig0022413:-65601 Msa1400000:CDS
GCAGAAACTGCATCTGCAAA+CGG 0.538954 tig0022413:-66031 Msa1400000:CDS
ATATACCTCCCATTTGAATG+AGG 0.539037 tig0022413:+65197 None:intergenic
AGGATGCATGATAGAATTGT+TGG 0.540134 tig0022413:-65581 Msa1400000:CDS
CCTGTTCTTAACAGGTACAA+TGG 0.541687 tig0022413:-65515 Msa1400000:CDS
AAAGATGGCTCCTACTAAAG+AGG 0.542571 tig0022413:-66532 Msa1400000:CDS
AAACATTAAATGCATGTTCG+TGG 0.544420 tig0022413:-65303 Msa1400000:three_prime_UTR
CTGCAGGTCCAAGTTTCGAA+AGG 0.545387 tig0022413:+66478 None:intergenic
TTCTGATCGTGCTACTGTGT+GGG 0.548187 tig0022413:-68429 Msa1400000:CDS
GAATTCGAAACCACCGGTGT+CGG 0.548683 tig0022413:+68653 None:intergenic
ATGTTGTCGGAGGAAGGTTG+TGG 0.549604 tig0022413:+69682 None:intergenic
GTAGCTATAGCAATCTCCGT+TGG 0.550002 tig0022413:-69538 Msa1400000:CDS
GGTCAACGATCAGAATCAAC+CGG 0.551067 tig0022413:-69311 Msa1400000:CDS
ACAGGGAGTCCTGAAGGTCT+GGG 0.553891 tig0022413:-66579 Msa1400000:intron
CTCTGCCGTGAAACTGAATA+CGG 0.554150 tig0022413:+69064 None:intergenic
GTGAGGAATTAAGGAATAGC+CGG 0.557672 tig0022413:-66237 Msa1400000:CDS
GTAGATATAAAGGGAACAGA+TGG 0.558654 tig0022413:-66106 Msa1400000:CDS
CAAGAGATCATTAGGTCTGA+AGG 0.560003 tig0022413:-66055 Msa1400000:CDS
TCCACCGCCACGTCAGCTAT+CGG 0.561384 tig0022413:-68885 Msa1400000:CDS
AATTCCTCAGCGGGAAACAA+TGG 0.562807 tig0022413:+69969 None:intergenic
CATTAAATGCATGTTCGTGG+TGG 0.563145 tig0022413:-65300 Msa1400000:three_prime_UTR
GTAGCCCATTTGAGTGAACC+AGG 0.565511 tig0022413:+65244 None:intergenic
AATGAAACAGGGAGTCCTGA+AGG 0.566792 tig0022413:-66585 Msa1400000:intron
AAGTTACTGAATACTTTCAT+GGG 0.566826 tig0022413:-65697 Msa1400000:CDS
ATGTTGAAGCTTGAATTATG+AGG 0.571481 tig0022413:+69874 None:intergenic
CGTAACGTTAGGAATGTTGT+CGG 0.572626 tig0022413:-69512 Msa1400000:CDS
CGACGAAGAAAGTAACGAAA+CGG 0.573818 tig0022413:-69140 Msa1400000:CDS
TCTTCTTCCGACGACATCGC+CGG 0.574108 tig0022413:+69166 None:intergenic
TGTTGAAGAAGCTAATGAAA+CGG 0.574348 tig0022413:-68504 Msa1400000:CDS
TCTTCCGTGAATTCCTCAGC+GGG 0.576175 tig0022413:+69960 None:intergenic
GAGGAAGAGTTTAAGAAGAA+CGG 0.577887 tig0022413:-65974 Msa1400000:CDS
CGCTACAACAGCGAATCCAA+CGG 0.578077 tig0022413:-69590 Msa1400000:CDS
ACCGTCGTTGACCTTCTCGA+AGG 0.578810 tig0022413:+69331 None:intergenic
TTTCGTGTCATTGGAGGTGG+CGG 0.578958 tig0022413:+68686 None:intergenic
ACAGGAAATAGAATGAATGT+TGG 0.583758 tig0022413:-66181 Msa1400000:CDS
AGGAGGTTAAGTGAAGGAGG+TGG 0.584698 tig0022413:-68617 Msa1400000:CDS
ATGTCCTACTCCATCGGAGG+AGG 0.584834 tig0022413:+68850 None:intergenic
AAAATCAGTGTCGCCGACAC+CGG 0.585534 tig0022413:-68666 Msa1400000:CDS
ATTCACATCATTAAAATGTG+TGG 0.585641 tig0022413:+65093 None:intergenic
TTCTGTTGATCATGAGAACA+AGG 0.586576 tig0022413:-68162 Msa1400000:CDS
ACAATGGAGAGAGAGAAAAG+AGG 0.588865 tig0022413:+69985 None:intergenic
TCAGTTTATGATACGGTGAA+CGG 0.589581 tig0022413:+69278 None:intergenic
CCGTTAAGTAAACCTCCAAA+CGG 0.593283 tig0022413:-69199 Msa1400000:CDS
GTGGTGGTGCTGTACTCGCT+GGG 0.594657 tig0022413:+69734 None:intergenic
GGGTTTGGAAAGACTTCTTG+AGG 0.594870 tig0022413:+66361 None:intergenic
TATCTGCCAGGCAGCAAGTG+AGG 0.597764 tig0022413:-66254 Msa1400000:intron
AAGAGAATTGTTCCTCTGTG+TGG 0.598217 tig0022413:+69420 None:intergenic
GCTGCTTGATTCTGATTCGA+CGG 0.600193 tig0022413:+69628 None:intergenic
TTAAATGCATGTTCGTGGTG+GGG 0.603383 tig0022413:-65298 Msa1400000:three_prime_UTR
GAAGATGATGAAGATTATGA+TGG 0.603988 tig0022413:+69849 None:intergenic
GAAAGATAGCCATACCTCAA+GGG 0.604920 tig0022413:+66341 None:intergenic
GCAGAAGAATTCGAAACCAC+CGG 0.605400 tig0022413:+68647 None:intergenic
CATTCCACCGGCGATGTCGT+CGG 0.605871 tig0022413:-69173 Msa1400000:CDS
GATTAAGGCTCATGAGAGAG+AGG 0.608378 tig0022413:-65738 Msa1400000:CDS
TGTTTCTCCGATAGCTGACG+TGG 0.609728 tig0022413:+68878 None:intergenic
ATGAATGTTGGTACTAATCG+AGG 0.613150 tig0022413:-66169 Msa1400000:CDS
TTGTCGGAGGAAGGTTGTGG+TGG 0.614144 tig0022413:+69685 None:intergenic
ACAAGATAGAAGCTCAGATG+AGG 0.615718 tig0022413:-65489 Msa1400000:CDS
AAACAGTTAACCTCCTCCGA+TGG 0.618020 tig0022413:-68860 Msa1400000:CDS
TTCACTAGTAGCAAAAGTGA+AGG 0.618040 tig0022413:-65353 Msa1400000:three_prime_UTR
ATTCTTCTGCATCTATAAGG+AGG 0.618549 tig0022413:-68634 Msa1400000:CDS
ATCAGTGTCGCCGACACCGG+TGG 0.619955 tig0022413:-68663 Msa1400000:CDS
AGATGCGCCAAATTCGGAGG+TGG 0.620461 tig0022413:+68797 None:intergenic
ATTCAGTAACTTCTTTCACA+AGG 0.622158 tig0022413:+65708 None:intergenic
TTGTTCTCATGATCAACAGA+AGG 0.625101 tig0022413:+68164 None:intergenic
CGGCAGAGTTCTCTCAGTAA+CGG 0.625992 tig0022413:-69049 Msa1400000:CDS
TTAACCTCCTCCGATGGAGT+AGG 0.628605 tig0022413:-68854 Msa1400000:CDS
CTTCTGATCGTGCTACTGTG+TGG 0.628803 tig0022413:-68430 Msa1400000:CDS
GAAGAACGGATTGCATGTTG+TGG 0.629538 tig0022413:-65960 Msa1400000:CDS
TCTTCCGACGACATCGCCGG+TGG 0.630955 tig0022413:+69169 None:intergenic
TCCAAACGGAAACATTCCAC+CGG 0.631230 tig0022413:-69185 Msa1400000:CDS
TGAGATCTTCTTCTTCCGAG+AGG 0.632668 tig0022413:-68529 Msa1400000:CDS
TACCTGTTAAGAACAGGCAA+TGG 0.632916 tig0022413:+65521 None:intergenic
GCTGGTCTCAGTAAAGACCT+TGG 0.636005 tig0022413:-65938 Msa1400000:CDS
TTTGTATTCACAATACTAAG+GGG 0.636042 tig0022413:+65457 None:intergenic
GAAGCTAATGAAACGGAAGG+TGG 0.641793 tig0022413:-68497 Msa1400000:CDS
GAAGAAAGAAAGTAATTCGA+CGG 0.642566 tig0022413:-69017 Msa1400000:CDS
GCTTGATTCTGATTCGACGG+TGG 0.642616 tig0022413:+69631 None:intergenic
ATTCCGTTAAGCGATCCGAT+CGG 0.645648 tig0022413:-69255 Msa1400000:CDS
TGAAGATGCGCCAAATTCGG+AGG 0.650181 tig0022413:+68794 None:intergenic
GAAGTCTTTCCAAACCCTTG+AGG 0.654822 tig0022413:-66355 Msa1400000:intron
GAAGAAGCTAATGAAACGGA+AGG 0.657154 tig0022413:-68500 Msa1400000:CDS
TCCTAACGTTACGATTCCAA+CGG 0.658338 tig0022413:+69522 None:intergenic
TATGAGAAACCAGATATGAG+AGG 0.659545 tig0022413:-65818 Msa1400000:CDS
ATTGTCCTCATTCAAATGGG+AGG 0.660660 tig0022413:-65202 Msa1400000:three_prime_UTR
GAACTGTGGAACCTTCGAGA+AGG 0.666216 tig0022413:-69342 Msa1400000:CDS
AGTTGAAGCTATGCTATACA+GGG 0.666948 tig0022413:-66409 Msa1400000:CDS
ACGCAGAAGAAGAAATTGTG+AGG 0.668122 tig0022413:-65760 Msa1400000:CDS
ATGCATGATAGAATTGTTGG+TGG 0.671664 tig0022413:-65578 Msa1400000:CDS
TCTATAAGGAGGTTAAGTGA+AGG 0.672605 tig0022413:-68623 Msa1400000:CDS
TCCCATTTGAATGAGGACAA+TGG 0.672995 tig0022413:+65204 None:intergenic
CGGACTCGGTCGATACCGAT+CGG 0.675727 tig0022413:+69240 None:intergenic
TTCTTCCGTGAATTCCTCAG+CGG 0.676446 tig0022413:+69959 None:intergenic
GCTCCAAAACCAAAAGAACA+AGG 0.677455 tig0022413:-68206 Msa1400000:CDS
GAAGAATGGAATGTTGTCGG+AGG 0.679549 tig0022413:+69672 None:intergenic
TGAATGTCCTACTCCATCGG+AGG 0.684539 tig0022413:+68847 None:intergenic
TGACTTACCGAAGAATTCTG+CGG 0.688640 tig0022413:+69106 None:intergenic
TTTGGAGGTTTACTTAACGG+CGG 0.693198 tig0022413:+69202 None:intergenic
ATTGTGATGACGGAATCTGT+CGG 0.696376 tig0022413:-70052 None:intergenic
GACCACAAAGTGTAGCAATG+TGG 0.710439 tig0022413:+66078 None:intergenic
TTCTCCGATAGCTGACGTGG+CGG 0.720484 tig0022413:+68881 None:intergenic
ACGTTACAAAGCTTGAAACG+GGG 0.722165 tig0022413:-65868 Msa1400000:CDS
ACCTTCGAGAAGGTCAACGA+CGG 0.731915 tig0022413:-69332 Msa1400000:CDS
AATGGACTCCAAATTTAACG+AGG 0.750084 tig0022413:-65993 Msa1400000:CDS
TAGTGAGTACTTCCACACAG+AGG 0.774217 tig0022413:-69432 Msa1400000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACCAAAAAAATTTTTTTTTT+GGG + tig0022413:67959-67978 None:intergenic 10.0%
!!! AACCAAAAAAATTTTTTTTT+TGG + tig0022413:67960-67979 None:intergenic 10.0%
!!! TTTTATTTTTTAATGAAACA+GGG - tig0022413:68382-68401 Msa1400000:intron 10.0%
!!! TCTATATATCTATCATTTTT+GGG - tig0022413:66623-66642 Msa1400000:intron 15.0%
!!! ATTCAGTTCATTTTTTTTTT+AGG - tig0022413:67208-67227 Msa1400000:intron 15.0%
!!! TTCAGTTCATTTTTTTTTTA+GGG - tig0022413:67209-67228 Msa1400000:intron 15.0%
!!! AATTTTTTTTTTGGGAATAA+TGG + tig0022413:67951-67970 None:intergenic 15.0%
!!! TCCCAAAAAAAAAATTTTTT+TGG - tig0022413:67955-67974 Msa1400000:intron 15.0%
!! TAAATAAACTTTAAATTGTG+TGG - tig0022413:68003-68022 Msa1400000:intron 15.0%
!!! GTTTTATTTTTTAATGAAAC+AGG - tig0022413:68381-68400 Msa1400000:intron 15.0%
!! ATAAAATTGAAAAACTATGA+CGG - tig0022413:68474-68493 Msa1400000:CDS 15.0%
!!! CTCTATATATCTATCATTTT+TGG - tig0022413:66622-66641 Msa1400000:intron 20.0%
!! TAGATTAAATGAAGATATGA+TGG - tig0022413:66714-66733 Msa1400000:intron 20.0%
!! AAAATATAGCTATACTGTTA+AGG - tig0022413:66860-66879 Msa1400000:intron 20.0%
!! AAATATAGCTATACTGTTAA+GGG - tig0022413:66861-66880 Msa1400000:intron 20.0%
!!! CAAATCACATTTTCTAATTT+TGG - tig0022413:66999-67018 Msa1400000:intron 20.0%
!!! TTTTGGTAAAACATACAAAT+TGG - tig0022413:67016-67035 Msa1400000:intron 20.0%
!! TTTGGTAAAACATACAAATT+GGG - tig0022413:67017-67036 Msa1400000:intron 20.0%
!!! TCATTATGTTATTTTAAGAG+AGG - tig0022413:67399-67418 Msa1400000:intron 20.0%
!! GTTTAATGACAAAAATTCTT+CGG + tig0022413:67580-67599 None:intergenic 20.0%
!!! GAACATAAGTTAGTTAATTT+TGG + tig0022413:67621-67640 None:intergenic 20.0%
!!! TTCTGATATTTCACATATTT+TGG + tig0022413:68270-68289 None:intergenic 20.0%
!! CAATCATGAAAATTCTTAAA+GGG + tig0022413:69330-69349 None:intergenic 20.0%
!! ACAATCATGAAAATTCTTAA+AGG + tig0022413:69331-69350 None:intergenic 20.0%
!!! TTTTCTAAACATTTTGGATT+TGG - tig0022413:69357-69376 Msa1400000:CDS 20.0%
!!! TTTTGTATTCACAATACTAA+GGG + tig0022413:69525-69544 None:intergenic 20.0%
!!! TTTTTGTATTCACAATACTA+AGG + tig0022413:69526-69545 None:intergenic 20.0%
!!! TTTTAATGATGTGAATGTTT+TGG - tig0022413:69892-69911 Msa1400000:exon 20.0%
!! TGGTATAAACATTAAAATGT+AGG + tig0022413:70002-70021 None:intergenic 20.0%
! GAAAATGTGATTTGAAAGTT+TGG + tig0022413:66993-67012 None:intergenic 25.0%
! TTGGTAAAACATACAAATTG+GGG - tig0022413:67018-67037 Msa1400000:intron 25.0%
!! GATTTTATTGTGTTAACCAA+AGG - tig0022413:67079-67098 Msa1400000:intron 25.0%
! TGATATAGAAAAAGTTGTGT+AGG - tig0022413:67254-67273 Msa1400000:intron 25.0%
! AAATTTAGGTATTCTTGTAC+TGG - tig0022413:67425-67444 Msa1400000:intron 25.0%
! TGAGAACAAAGAATAAAACA+AGG - tig0022413:67501-67520 Msa1400000:intron 25.0%
!! CATAAGTTAGTTAATTTTGG+TGG + tig0022413:67618-67637 None:intergenic 25.0%
!! TGATAAAATAGTCCATCTTT+TGG + tig0022413:67784-67803 None:intergenic 25.0%
!! TTACAATTAACTGTCATTTG+AGG + tig0022413:68118-68137 None:intergenic 25.0%
! TCAAATGACAGTTAATTGTA+AGG - tig0022413:68117-68136 Msa1400000:CDS 25.0%
! TATTGGCAAAATGAAAACAT+AGG + tig0022413:68343-68362 None:intergenic 25.0%
! TTTGCCAATATGTTAATTCA+TGG - tig0022413:68353-68372 Msa1400000:intron 25.0%
! TTGCCAATATGTTAATTCAT+GGG - tig0022413:68354-68373 Msa1400000:intron 25.0%
! GATAGATATTAACAACTCAT+AGG + tig0022413:68708-68727 None:intergenic 25.0%
! AAGTTACTGAATACTTTCAT+GGG - tig0022413:69281-69300 Msa1400000:CDS 25.0%
!! GAGAGATTTTCTAAACATTT+TGG - tig0022413:69351-69370 Msa1400000:CDS 25.0%
! TTTGTATTCACAATACTAAG+GGG + tig0022413:69524-69543 None:intergenic 25.0%
! ATTCACATCATTAAAATGTG+TGG + tig0022413:69888-69907 None:intergenic 25.0%
! TTTCAATGATTCTAATGTAC+TGG + tig0022413:70022-70041 None:intergenic 25.0%
AGAAAAGAGGAAACTTCTTT+CGG + tig0022413:64983-65002 None:intergenic 30.0%
GCAAAATTCATGTCTGAATT+TGG + tig0022413:65055-65074 None:intergenic 30.0%
ATGTTGAAGCTTGAATTATG+AGG + tig0022413:65107-65126 None:intergenic 30.0%
GAAGATGATGAAGATTATGA+TGG + tig0022413:65132-65151 None:intergenic 30.0%
!!! ACTTTTTTTGTTCCTTTTGC+TGG + tig0022413:65422-65441 None:intergenic 30.0%
ACGGAATTCAGTTTATGATA+CGG + tig0022413:65710-65729 None:intergenic 30.0%
GAAGAAAGAAAGTAATTCGA+CGG - tig0022413:65961-65980 Msa1400000:CDS 30.0%
TGTTGAAGAAGCTAATGAAA+CGG - tig0022413:66474-66493 Msa1400000:CDS 30.0%
! GAAACGAGCTTGATTTTATT+TGG + tig0022413:66576-66595 None:intergenic 30.0%
! TTTCTAACACCTTGTTCTTT+TGG + tig0022413:66784-66803 None:intergenic 30.0%
! GCTATATTTTGTGACTTCTT+AGG + tig0022413:66850-66869 None:intergenic 30.0%
! ACTTCATTCTTTTCCCTTTT+TGG - tig0022413:66939-66958 Msa1400000:intron 30.0%
GCAAGTATAAACTCCAAAAA+GGG + tig0022413:66955-66974 None:intergenic 30.0%
AGCAAGTATAAACTCCAAAA+AGG + tig0022413:66956-66975 None:intergenic 30.0%
TTCATATTACTAAGGTCCTT+TGG + tig0022413:67098-67117 None:intergenic 30.0%
AGTCGAACTTCATATTACTA+AGG + tig0022413:67106-67125 None:intergenic 30.0%
GACAAACAATTGTTTCACTT+TGG - tig0022413:67144-67163 Msa1400000:intron 30.0%
ATAGAAAAAGTTGTGTAGGA+AGG - tig0022413:67258-67277 Msa1400000:intron 30.0%
TAGAAAAAGTTGTGTAGGAA+GGG - tig0022413:67259-67278 Msa1400000:intron 30.0%
! TTTAAGAGAGGTGCAAATTT+AGG - tig0022413:67411-67430 Msa1400000:intron 30.0%
GTACTGGAAATTTCAAATTG+TGG - tig0022413:67441-67460 Msa1400000:intron 30.0%
CTTATGTTCCTTAACAACTT+AGG - tig0022413:67632-67651 Msa1400000:intron 30.0%
AGAATGCATAGATGATGATT+TGG + tig0022413:67749-67768 None:intergenic 30.0%
TTGATTCTTATATCAGCTGA+GGG - tig0022413:67878-67897 Msa1400000:intron 30.0%
TGTGTGGATGTCTAAATATA+TGG - tig0022413:68019-68038 Msa1400000:intron 30.0%
GTAACGTGATTTATCTGTTA+AGG + tig0022413:68082-68101 None:intergenic 30.0%
TGCCAATATGTTAATTCATG+GGG - tig0022413:68355-68374 Msa1400000:intron 30.0%
TTTATCTCTTCCTCTTTAGT+AGG + tig0022413:68459-68478 None:intergenic 30.0%
! CAACTCTTTTGAATGCAAAA+GGG + tig0022413:68554-68573 None:intergenic 30.0%
! TCAACTCTTTTGAATGCAAA+AGG + tig0022413:68555-68574 None:intergenic 30.0%
TCAAGAGATCAAAGATAACA+AGG + tig0022413:68667-68686 None:intergenic 30.0%
ACAGGAAATAGAATGAATGT+TGG - tig0022413:68797-68816 Msa1400000:CDS 30.0%
CTGAAACTCGTAGATATAAA+GGG - tig0022413:68863-68882 Msa1400000:CDS 30.0%
AAACTCTTCCTCGTTAAATT+TGG + tig0022413:68996-69015 None:intergenic 30.0%
GTATTTCAAAAAGAGCTTTG+TGG + tig0022413:69200-69219 None:intergenic 30.0%
AGAAGAAATTGTGAGGATTA+AGG - tig0022413:69225-69244 Msa1400000:CDS 30.0%
ATTCAGTAACTTCTTTCACA+AGG + tig0022413:69273-69292 None:intergenic 30.0%
GAAGTTACTGAATACTTTCA+TGG - tig0022413:69280-69299 Msa1400000:CDS 30.0%
!!! ACTTTCACTGTTATTTTGAG+AGG + tig0022413:69559-69578 None:intergenic 30.0%
TTGCAAATTTGAACTCTCAT+TGG - tig0022413:69590-69609 Msa1400000:CDS 30.0%
TGCAAATTTGAACTCTCATT+GGG - tig0022413:69591-69610 Msa1400000:CDS 30.0%
! ACTTTTGCTACTAGTGAAAT+GGG + tig0022413:69623-69642 None:intergenic 30.0%
AAACATTAAATGCATGTTCG+TGG - tig0022413:69675-69694 Msa1400000:CDS 30.0%
!! CTATAGCATACGTATTTTAG+TGG + tig0022413:69831-69850 None:intergenic 30.0%
ACGTATGCTATAGTCAAAAT+AGG - tig0022413:69838-69857 Msa1400000:CDS 30.0%
!!! AATGTTTTGGTTTACGTAAG+AGG - tig0022413:69905-69924 Msa1400000:five_prime_UTR 30.0%
GCTTGAATTATGAGGTTTCA+TGG + tig0022413:65099-65118 None:intergenic 35.0%
! TCTTCTTGTGTGATGATGAT+CGG + tig0022413:65204-65223 None:intergenic 35.0%
ATGGAAGAATGGAATGTTGT+CGG + tig0022413:65312-65331 None:intergenic 35.0%
TCTGGATATTCATGGAAGAA+TGG + tig0022413:65323-65342 None:intergenic 35.0%
GTTGTAGCGTTAGAAGTTAA+CGG + tig0022413:65377-65396 None:intergenic 35.0%
TTCATCAAATTCATCTGCTC+CGG - tig0022413:65586-65605 Msa1400000:CDS 35.0%
AGAAAATTCGAAGCTACTAC+CGG + tig0022413:65608-65627 None:intergenic 35.0%
! GCTTCGAATTTTCTCTACAT+TGG - tig0022413:65614-65633 Msa1400000:CDS 35.0%
! TTTTCTCTACATTGGAACTG+TGG - tig0022413:65622-65641 Msa1400000:CDS 35.0%
TCAGTTTATGATACGGTGAA+CGG + tig0022413:65703-65722 None:intergenic 35.0%
GAATTACTTTCTTTCTTCGC+CGG + tig0022413:65959-65978 None:intergenic 35.0%
GAAAGAGCAGATTTCGATTT+CGG + tig0022413:66019-66038 None:intergenic 35.0%
CGAATTCTTCTGCATCTATA+AGG - tig0022413:66341-66360 Msa1400000:intron 35.0%
ATTCTTCTGCATCTATAAGG+AGG - tig0022413:66344-66363 Msa1400000:intron 35.0%
TCTATAAGGAGGTTAAGTGA+AGG - tig0022413:66355-66374 Msa1400000:intron 35.0%
!! TCTGTTGGTAGTGTAAGAAA+AGG - tig0022413:66385-66404 Msa1400000:CDS 35.0%
CAATGCAATGCTTTCAACTT+CGG + tig0022413:66511-66530 None:intergenic 35.0%
!! GAAGTTGAAAGCATTGCATT+GGG - tig0022413:66510-66529 Msa1400000:CDS 35.0%
! GATATGATGGAGTCTTTGTT+TGG - tig0022413:66727-66746 Msa1400000:intron 35.0%
! TCTTTGTTTGGTTGCAACAA+TGG - tig0022413:66739-66758 Msa1400000:intron 35.0%
!!! ACACCTTGTTCTTTTGGTTT+TGG + tig0022413:66778-66797 None:intergenic 35.0%
TTGTTCTCATGATCAACAGA+AGG + tig0022413:66817-66836 None:intergenic 35.0%
TTCTGTTGATCATGAGAACA+AGG - tig0022413:66816-66835 Msa1400000:intron 35.0%
!!! TGAAGTTTCTGAAGCTCTTT+TGG - tig0022413:66903-66922 Msa1400000:intron 35.0%
GTATTAGTCATAGAGAAGCA+TGG - tig0022413:67288-67307 Msa1400000:intron 35.0%
ACATGTGTGATGATTCAGTA+TGG - tig0022413:67345-67364 Msa1400000:intron 35.0%
GTTCTCAAGTACATTGTATG+AGG + tig0022413:67488-67507 None:intergenic 35.0%
GTTCCTTAACAACTTAGGTT+TGG - tig0022413:67637-67656 Msa1400000:intron 35.0%
AAGCCAAACCTAAGTTGTTA+AGG + tig0022413:67643-67662 None:intergenic 35.0%
GGATATATCATCTGTGATCA+CGG + tig0022413:67728-67747 None:intergenic 35.0%
!! CCATCTTTTGGATTAGAACA+TGG + tig0022413:67772-67791 None:intergenic 35.0%
CCATGTTCTAATCCAAAAGA+TGG - tig0022413:67769-67788 Msa1400000:intron 35.0%
CTCAGCTGATATAAGAATCA+AGG + tig0022413:67879-67898 None:intergenic 35.0%
CTTGATTCTTATATCAGCTG+AGG - tig0022413:67877-67896 Msa1400000:intron 35.0%
TGATTCTTATATCAGCTGAG+GGG - tig0022413:67879-67898 Msa1400000:intron 35.0%
! CAATTAACTGTCATTTGAGG+TGG + tig0022413:68115-68134 None:intergenic 35.0%
ATAGGATGCAAATAAGCGAT+TGG + tig0022413:68325-68344 None:intergenic 35.0%
GCCAATATGTTAATTCATGG+GGG - tig0022413:68356-68375 Msa1400000:intron 35.0%
ACCCCCATGAATTAACATAT+TGG + tig0022413:68360-68379 None:intergenic 35.0%
AATATGTTAATTCATGGGGG+TGG - tig0022413:68359-68378 Msa1400000:intron 35.0%
ATTGGAAACCCTAGTAAAGA+TGG - tig0022413:68431-68450 Msa1400000:CDS 35.0%
!! GCTTTAAGAAATCTTTCTGC+AGG + tig0022413:68519-68538 None:intergenic 35.0%
AGTTGAAGCTATGCTATACA+GGG - tig0022413:68569-68588 Msa1400000:CDS 35.0%
! GTTGATTTCTGAATCGAAGT+TGG + tig0022413:68595-68614 None:intergenic 35.0%
GTTGTTAATATCTATCTGCC+AGG - tig0022413:68712-68731 Msa1400000:CDS 35.0%
ATGAATGTTGGTACTAATCG+AGG - tig0022413:68809-68828 Msa1400000:CDS 35.0%
CCTTTATATCTACGAGTTTC+AGG + tig0022413:68865-68884 None:intergenic 35.0%
CCTGAAACTCGTAGATATAA+AGG - tig0022413:68862-68881 Msa1400000:CDS 35.0%
GTAGATATAAAGGGAACAGA+TGG - tig0022413:68872-68891 Msa1400000:CDS 35.0%
! AATTTGGAGTCCATTTGGTT+GGG + tig0022413:68980-68999 None:intergenic 35.0%
! AAATTTGGAGTCCATTTGGT+TGG + tig0022413:68981-69000 None:intergenic 35.0%
! CGTTAAATTTGGAGTCCATT+TGG + tig0022413:68985-69004 None:intergenic 35.0%
! AATGGACTCCAAATTTAACG+AGG - tig0022413:68985-69004 Msa1400000:CDS 35.0%
GAGGAAGAGTTTAAGAAGAA+CGG - tig0022413:69004-69023 Msa1400000:CDS 35.0%
!!! CTGCTTTTTTGACATTACCA+AGG + tig0022413:69060-69079 None:intergenic 35.0%
CTACGTTACAAAGCTTGAAA+CGG - tig0022413:69108-69127 Msa1400000:CDS 35.0%
TACGTTACAAAGCTTGAAAC+GGG - tig0022413:69109-69128 Msa1400000:CDS 35.0%
TATGAGAAACCAGATATGAG+AGG - tig0022413:69160-69179 Msa1400000:CDS 35.0%
AAGAAATTGCCTCTCATATC+TGG + tig0022413:69172-69191 None:intergenic 35.0%
!! GATTTGGTTTGCAAAGAAGT+TGG - tig0022413:69373-69392 Msa1400000:CDS 35.0%
AGGATGCATGATAGAATTGT+TGG - tig0022413:69397-69416 Msa1400000:CDS 35.0%
ATGCATGATAGAATTGTTGG+TGG - tig0022413:69400-69419 Msa1400000:CDS 35.0%
CTGTTCTTAACAGGTACAAT+GGG - tig0022413:69464-69483 Msa1400000:CDS 35.0%
! CACTTTTGCTACTAGTGAAA+TGG + tig0022413:69624-69643 None:intergenic 35.0%
TTCACTAGTAGCAAAAGTGA+AGG - tig0022413:69625-69644 Msa1400000:CDS 35.0%
!! TTGCTGTTTGATCTCAATGA+AGG + tig0022413:69655-69674 None:intergenic 35.0%
ATTAAATGCATGTTCGTGGT+GGG - tig0022413:69679-69698 Msa1400000:CDS 35.0%
ATATACCTCCCATTTGAATG+AGG + tig0022413:69784-69803 None:intergenic 35.0%
ACAATGGAGAGAGAGAAAAG+AGG + tig0022413:64996-65015 None:intergenic 40.0%
TCCTAACGTTACGATTCCAA+CGG + tig0022413:65459-65478 None:intergenic 40.0%
CGTAACGTTAGGAATGTTGT+CGG - tig0022413:65466-65485 Msa1400000:exon 40.0%
AAGAGAATTGTTCCTCTGTG+TGG + tig0022413:65561-65580 None:intergenic 40.0%
TTATGATACGGTGAACGGTT+AGG + tig0022413:65698-65717 None:intergenic 40.0%
TTTGGAGGTTTACTTAACGG+CGG + tig0022413:65779-65798 None:intergenic 40.0%
CCGTTTGGAGGTTTACTTAA+CGG + tig0022413:65782-65801 None:intergenic 40.0%
CCGTTAAGTAAACCTCCAAA+CGG - tig0022413:65779-65798 Msa1400000:CDS 40.0%
! CGTTTCGTTACTTTCTTCGT+CGG + tig0022413:65840-65859 None:intergenic 40.0%
CGACGAAGAAAGTAACGAAA+CGG - tig0022413:65838-65857 Msa1400000:CDS 40.0%
TGACTTACCGAAGAATTCTG+CGG + tig0022413:65875-65894 None:intergenic 40.0%
! GTTCTTTTCGATTTCGGAAG+CGG + tig0022413:65992-66011 None:intergenic 40.0%
! GGCGAAGTTCTTTTCGATTT+CGG + tig0022413:65998-66017 None:intergenic 40.0%
! ATGATGACGTGTCGAATATC+AGG + tig0022413:66052-66071 None:intergenic 40.0%
TCTTGAATGTCCTACTCCAT+CGG + tig0022413:66137-66156 None:intergenic 40.0%
GATTGAAGATGCGCCAAATT+CGG + tig0022413:66190-66209 None:intergenic 40.0%
!! ACTGATTTTCGTGTCATTGG+AGG + tig0022413:66301-66320 None:intergenic 40.0%
!!! GACACTGATTTTCGTGTCAT+TGG + tig0022413:66304-66323 None:intergenic 40.0%
ATAAGGAGGTTAAGTGAAGG+AGG - tig0022413:66358-66377 Msa1400000:CDS 40.0%
GAAGAAGCTAATGAAACGGA+AGG - tig0022413:66478-66497 Msa1400000:CDS 40.0%
!! CGAAGTTGAAAGCATTGCAT+TGG - tig0022413:66509-66528 Msa1400000:CDS 40.0%
GCTCCAAAACCAAAAGAACA+AGG - tig0022413:66772-66791 Msa1400000:intron 40.0%
!!! GTTTCTGAAGCTCTTTTGGA+TGG - tig0022413:66907-66926 Msa1400000:intron 40.0%
! CATACAAATTGGGGTGTCTA+TGG - tig0022413:67027-67046 Msa1400000:intron 40.0%
! TACATTGTATGAGGTGGACT+TGG + tig0022413:67479-67498 None:intergenic 40.0%
CTCAAGTACATTGTATGAGG+TGG + tig0022413:67485-67504 None:intergenic 40.0%
!!! AGGTTTGGCTTTTTGCTCTA+AGG - tig0022413:67652-67671 Msa1400000:intron 40.0%
!!! GGTTTGGCTTTTTGCTCTAA+GGG - tig0022413:67653-67672 Msa1400000:intron 40.0%
AGTAGACTGTAAGGGAAGTT+AGG + tig0022413:67919-67938 None:intergenic 40.0%
TAACTTCCCTTACAGTCTAC+TGG - tig0022413:67918-67937 Msa1400000:intron 40.0%
CAACAACCAGTAGACTGTAA+GGG + tig0022413:67927-67946 None:intergenic 40.0%
! TTAACTGTCATTTGAGGTGG+AGG + tig0022413:68112-68131 None:intergenic 40.0%
ACATCCAAGTCTAACTGACA+TGG - tig0022413:68184-68203 Msa1400000:CDS 40.0%
TTCTCCATGTCAGTTAGACT+TGG + tig0022413:68191-68210 None:intergenic 40.0%
! GCAAATAAGCGATTGGTTCA+AGG + tig0022413:68318-68337 None:intergenic 40.0%
AGTAGGAGCCATCTTTACTA+GGG + tig0022413:68442-68461 None:intergenic 40.0%
TAGTAGGAGCCATCTTTACT+AGG + tig0022413:68443-68462 None:intergenic 40.0%
AAAGATGGCTCCTACTAAAG+AGG - tig0022413:68446-68465 Msa1400000:CDS 40.0%
GAGTTGAAGCTATGCTATAC+AGG - tig0022413:68568-68587 Msa1400000:CDS 40.0%
GAAAGATAGCCATACCTCAA+GGG + tig0022413:68640-68659 None:intergenic 40.0%
TGAAAGATAGCCATACCTCA+AGG + tig0022413:68641-68660 None:intergenic 40.0%
GTGAGGAATTAAGGAATAGC+CGG - tig0022413:68741-68760 Msa1400000:CDS 40.0%
CCAGGAGTTTGAAGAATAAC+CGG + tig0022413:68763-68782 None:intergenic 40.0%
TTGTGGTCCAAGAGATCATT+AGG - tig0022413:68915-68934 Msa1400000:CDS 40.0%
CTTCAGACCTAATGATCTCT+TGG + tig0022413:68925-68944 None:intergenic 40.0%
CAAGAGATCATTAGGTCTGA+AGG - tig0022413:68923-68942 Msa1400000:CDS 40.0%
GGTAATGTCAAAAAAGCAGC+AGG - tig0022413:69061-69080 Msa1400000:CDS 40.0%
TGTCAAAAAAGCAGCAGGAA+TGG - tig0022413:69066-69085 Msa1400000:CDS 40.0%
ACGTTACAAAGCTTGAAACG+GGG - tig0022413:69110-69129 Msa1400000:CDS 40.0%
ACGCAGAAGAAGAAATTGTG+AGG - tig0022413:69218-69237 Msa1400000:CDS 40.0%
! TGGTTTGCAAAGAAGTTGGA+AGG - tig0022413:69377-69396 Msa1400000:CDS 40.0%
TACCTGTTAAGAACAGGCAA+TGG + tig0022413:69460-69479 None:intergenic 40.0%
CCATTGTACCTGTTAAGAAC+AGG + tig0022413:69466-69485 None:intergenic 40.0%
CCTGTTCTTAACAGGTACAA+TGG - tig0022413:69463-69482 Msa1400000:CDS 40.0%
ACAAGATAGAAGCTCAGATG+AGG - tig0022413:69489-69508 Msa1400000:CDS 40.0%
CATTAAATGCATGTTCGTGG+TGG - tig0022413:69678-69697 Msa1400000:CDS 40.0%
TTAAATGCATGTTCGTGGTG+GGG - tig0022413:69680-69699 Msa1400000:CDS 40.0%
CATACAGTTGAACACTTTCC+TGG - tig0022413:69716-69735 Msa1400000:CDS 40.0%
ACTTTCCTGGTTCACTCAAA+TGG - tig0022413:69729-69748 Msa1400000:CDS 40.0%
CTTTCCTGGTTCACTCAAAT+GGG - tig0022413:69730-69749 Msa1400000:CDS 40.0%
TGCCATTGTCCTCATTCAAA+TGG - tig0022413:69772-69791 Msa1400000:CDS 40.0%
GCCATTGTCCTCATTCAAAT+GGG - tig0022413:69773-69792 Msa1400000:CDS 40.0%
TCCCATTTGAATGAGGACAA+TGG + tig0022413:69777-69796 None:intergenic 40.0%
ATTGTCCTCATTCAAATGGG+AGG - tig0022413:69776-69795 Msa1400000:CDS 40.0%
AATTCCTCAGCGGGAAACAA+TGG + tig0022413:65012-65031 None:intergenic 45.0%
TTCTTCCGTGAATTCCTCAG+CGG + tig0022413:65022-65041 None:intergenic 45.0%
TCGCTGGGAATAATGGTTGA+TGG + tig0022413:65232-65251 None:intergenic 45.0%
AATGGAATGTTGTCGGAGGA+AGG + tig0022413:65305-65324 None:intergenic 45.0%
GAAGAATGGAATGTTGTCGG+AGG + tig0022413:65309-65328 None:intergenic 45.0%
! GCTGCTTGATTCTGATTCGA+CGG + tig0022413:65353-65372 None:intergenic 45.0%
GTAGCTATAGCAATCTCCGT+TGG - tig0022413:65440-65459 Msa1400000:three_prime_UTR 45.0%
TCCGTTGGAATCGTAACGTT+AGG - tig0022413:65455-65474 Msa1400000:exon 45.0%
ACACAGAGCAAAAAACGCTG+CGG - tig0022413:65511-65530 Msa1400000:CDS 45.0%
TAGTGAGTACTTCCACACAG+AGG - tig0022413:65546-65565 Msa1400000:CDS 45.0%
GGTCAACGATCAGAATCAAC+CGG - tig0022413:65667-65686 Msa1400000:CDS 45.0%
ATTCCGTTAAGCGATCCGAT+CGG - tig0022413:65723-65742 Msa1400000:CDS 45.0%
ATACCGATCGGATCGCTTAA+CGG + tig0022413:65729-65748 None:intergenic 45.0%
TCCAAACGGAAACATTCCAC+CGG - tig0022413:65793-65812 Msa1400000:CDS 45.0%
TCATTCGCCGCAGAATTCTT+CGG - tig0022413:65865-65884 Msa1400000:CDS 45.0%
GCAGAATTCTTCGGTAAGTC+AGG - tig0022413:65874-65893 Msa1400000:CDS 45.0%
TCTTCGGTAAGTCAGGAAGA+TGG - tig0022413:65881-65900 Msa1400000:CDS 45.0%
ACACGCCGTATTCAGTTTCA+CGG - tig0022413:65909-65928 Msa1400000:CDS 45.0%
CTCTGCCGTGAAACTGAATA+CGG + tig0022413:65917-65936 None:intergenic 45.0%
TTCTCTCAGTAACGGTAGTC+CGG - tig0022413:65937-65956 Msa1400000:CDS 45.0%
! GGAGGAGTTTGCTTGATAGA+AGG + tig0022413:66076-66095 None:intergenic 45.0%
AAACAGTTAACCTCCTCCGA+TGG - tig0022413:66118-66137 Msa1400000:CDS 45.0%
!! GATTTTCGTGTCATTGGAGG+TGG + tig0022413:66298-66317 None:intergenic 45.0%
GCAGAAGAATTCGAAACCAC+CGG + tig0022413:66334-66353 None:intergenic 45.0%
TGAGATCTTCTTCTTCCGAG+AGG - tig0022413:66449-66468 Msa1400000:CDS 45.0%
AGCTTCTTCAACAAGCCTCT+CGG + tig0022413:66467-66486 None:intergenic 45.0%
GAAGCTAATGAAACGGAAGG+TGG - tig0022413:66481-66500 Msa1400000:CDS 45.0%
! TTCTGATCGTGCTACTGTGT+GGG - tig0022413:66549-66568 Msa1400000:CDS 45.0%
!! AGTTGTGTAGGAAGGGCATT+AGG - tig0022413:67266-67285 Msa1400000:intron 45.0%
! GTATGAGGTGGACTTGGATT+TGG + tig0022413:67473-67492 None:intergenic 45.0%
ATCACGGCTCTCACTAAACT+AGG + tig0022413:67712-67731 None:intergenic 45.0%
CCAACAACCAGTAGACTGTA+AGG + tig0022413:67928-67947 None:intergenic 45.0%
! CCTTACAGTCTACTGGTTGT+TGG - tig0022413:67925-67944 Msa1400000:intron 45.0%
AATGAAACAGGGAGTCCTGA+AGG - tig0022413:68393-68412 Msa1400000:intron 45.0%
GGGTTTGGAAAGACTTCTTG+AGG + tig0022413:68620-68639 None:intergenic 45.0%
GAAGTCTTTCCAAACCCTTG+AGG - tig0022413:68623-68642 Msa1400000:CDS 45.0%
CTTTCCAAACCCTTGAGGTA+TGG - tig0022413:68628-68647 Msa1400000:CDS 45.0%
ATAGCCATACCTCAAGGGTT+TGG + tig0022413:68635-68654 None:intergenic 45.0%
! TTAATTCCTCACTTGCTGCC+TGG + tig0022413:68733-68752 None:intergenic 45.0%
AGGCAGCAAGTGAGGAATTA+AGG - tig0022413:68732-68751 Msa1400000:CDS 45.0%
CCGGTTATTCTTCAAACTCC+TGG - tig0022413:68760-68779 Msa1400000:CDS 45.0%
GACCACATTGCTACACTTTG+TGG - tig0022413:68898-68917 Msa1400000:CDS 45.0%
GACCACAAAGTGTAGCAATG+TGG + tig0022413:68903-68922 None:intergenic 45.0%
GCAGAAACTGCATCTGCAAA+CGG - tig0022413:68947-68966 Msa1400000:CDS 45.0%
! CGGAAGTATACCCAACCAAA+TGG - tig0022413:68967-68986 Msa1400000:CDS 45.0%
!! GAAGAACGGATTGCATGTTG+TGG - tig0022413:69018-69037 Msa1400000:CDS 45.0%
GATTAAGGCTCATGAGAGAG+AGG - tig0022413:69240-69259 Msa1400000:CDS 45.0%
CTTTCATGGGAATGCTGCAA+AGG - tig0022413:69294-69313 Msa1400000:CDS 45.0%
CACCATTGCCTGTTCTTAAC+AGG - tig0022413:69455-69474 Msa1400000:CDS 45.0%
!!! TATTTACTTTTAAAAAATTT+GGG + tig0022413:67989-68008 None:intergenic 5.0%
!!! TTATTTACTTTTAAAAAATT+TGG + tig0022413:67990-68009 None:intergenic 5.0%
GTTTCCCGCTGAGGAATTCA+CGG - tig0022413:65014-65033 Msa1400000:three_prime_UTR 50.0%
TCTTCCGTGAATTCCTCAGC+GGG + tig0022413:65021-65040 None:intergenic 50.0%
GCTGTACTCGCTGGGAATAA+TGG + tig0022413:65239-65258 None:intergenic 50.0%
ATGTTGTCGGAGGAAGGTTG+TGG + tig0022413:65299-65318 None:intergenic 50.0%
GTGGTGCGTCTGGATATTCA+TGG + tig0022413:65331-65350 None:intergenic 50.0%
! GCTTGATTCTGATTCGACGG+TGG + tig0022413:65350-65369 None:intergenic 50.0%
CGCTACAACAGCGAATCCAA+CGG - tig0022413:65388-65407 Msa1400000:three_prime_UTR 50.0%
! TTTGCTGGTTGTGTTGCCGT+TGG + tig0022413:65407-65426 None:intergenic 50.0%
ACGGCAACACAACCAGCAAA+AGG - tig0022413:65407-65426 Msa1400000:three_prime_UTR 50.0%
GAACTGTGGAACCTTCGAGA+AGG - tig0022413:65636-65655 Msa1400000:CDS 50.0%
ACCTTCGAGAAGGTCAACGA+CGG - tig0022413:65646-65665 Msa1400000:CDS 50.0%
ATTGGCTGTAACTCCGGACT+CGG + tig0022413:65755-65774 None:intergenic 50.0%
GGTTTACTTAACGGCGGCAT+TGG + tig0022413:65773-65792 None:intergenic 50.0%
GGTGGAATGTTTCCGTTTGG+AGG + tig0022413:65794-65813 None:intergenic 50.0%
CGGCAGAGTTCTCTCAGTAA+CGG - tig0022413:65929-65948 Msa1400000:CDS 50.0%
TGTTTCTCCGATAGCTGACG+TGG + tig0022413:66103-66122 None:intergenic 50.0%
TTAACCTCCTCCGATGGAGT+AGG - tig0022413:66124-66143 Msa1400000:CDS 50.0%
TGAATGTCCTACTCCATCGG+AGG + tig0022413:66134-66153 None:intergenic 50.0%
TGAAGATGCGCCAAATTCGG+AGG + tig0022413:66187-66206 None:intergenic 50.0%
! TTTCGTGTCATTGGAGGTGG+CGG + tig0022413:66295-66314 None:intergenic 50.0%
AAAATCAGTGTCGCCGACAC+CGG - tig0022413:66312-66331 Msa1400000:intron 50.0%
GAATTCGAAACCACCGGTGT+CGG + tig0022413:66328-66347 None:intergenic 50.0%
AGGAGGTTAAGTGAAGGAGG+TGG - tig0022413:66361-66380 Msa1400000:CDS 50.0%
! AGTGAAGGAGGTGGTTCTGT+TGG - tig0022413:66370-66389 Msa1400000:CDS 50.0%
! CTTCTGATCGTGCTACTGTG+TGG - tig0022413:66548-66567 Msa1400000:CDS 50.0%
CTGCAGGTCCAAGTTTCGAA+AGG + tig0022413:68503-68522 None:intergenic 50.0%
!! CTGTTCTGAGAACAGCTTCC+AGG + tig0022413:68781-68800 None:intergenic 50.0%
CTGGAAGCTGTTCTCAGAAC+AGG - tig0022413:68779-68798 Msa1400000:CDS 50.0%
!! AACGGATTGCATGTTGTGGC+TGG - tig0022413:69022-69041 Msa1400000:CDS 50.0%
! GCTGGTCTCAGTAAAGACCT+TGG - tig0022413:69040-69059 Msa1400000:CDS 50.0%
! GGGGCTTGAAAAAGTGCGAT+CGG - tig0022413:69129-69148 Msa1400000:CDS 50.0%
GTAGCCCATTTGAGTGAACC+AGG + tig0022413:69737-69756 None:intergenic 50.0%
CTCTCCATTGTTTCCCGCTG+AGG - tig0022413:65005-65024 Msa1400000:three_prime_UTR 55.0%
!! TTGTGGTGGTGGTGGTGTGA+CGG + tig0022413:65282-65301 None:intergenic 55.0%
TTGTCGGAGGAAGGTTGTGG+TGG + tig0022413:65296-65315 None:intergenic 55.0%
ACCGTCGTTGACCTTCTCGA+AGG + tig0022413:65650-65669 None:intergenic 55.0%
GGTGAACGGTTAGGCTTCTC+CGG + tig0022413:65689-65708 None:intergenic 55.0%
GCCGGTGGAATGTTTCCGTT+TGG + tig0022413:65797-65816 None:intergenic 55.0%
TCTTCTTCCGACGACATCGC+CGG + tig0022413:65815-65834 None:intergenic 55.0%
TTCTCCGATAGCTGACGTGG+CGG + tig0022413:66100-66119 None:intergenic 55.0%
ATGTCCTACTCCATCGGAGG+AGG + tig0022413:66131-66150 None:intergenic 55.0%
! GGCGGTGGTGCTGAGAATTT+CGG + tig0022413:66163-66182 None:intergenic 55.0%
AGATGCGCCAAATTCGGAGG+TGG + tig0022413:66184-66203 None:intergenic 55.0%
AACAGGGAGTCCTGAAGGTC+TGG - tig0022413:68398-68417 Msa1400000:intron 55.0%
ACAGGGAGTCCTGAAGGTCT+GGG - tig0022413:68399-68418 Msa1400000:intron 55.0%
!! AGGTCTGGGTGCTGAGCTAT+TGG - tig0022413:68413-68432 Msa1400000:CDS 55.0%
GACGGCGACCTTTCGAAACT+TGG - tig0022413:68492-68511 Msa1400000:CDS 55.0%
TATCTGCCAGGCAGCAAGTG+AGG - tig0022413:68724-68743 Msa1400000:CDS 55.0%
!! GTGGTGGTGCTGTACTCGCT+GGG + tig0022413:65247-65266 None:intergenic 60.0%
!! GAGGAAGGTTGTGGTGGTGG+TGG + tig0022413:65290-65309 None:intergenic 60.0%
TCGGAGGAAGGTTGTGGTGG+TGG + tig0022413:65293-65312 None:intergenic 60.0%
TGATTCGACGGTGGTGCGTC+TGG + tig0022413:65341-65360 None:intergenic 60.0%
! CGGACTCGGTCGATACCGAT+CGG + tig0022413:65741-65760 None:intergenic 60.0%
!! CGATCGGTATCGACCGAGTC+CGG - tig0022413:65739-65758 Msa1400000:CDS 60.0%
!! GGCGGCATTGGCTGTAACTC+CGG + tig0022413:65761-65780 None:intergenic 60.0%
CATTCCACCGGCGATGTCGT+CGG - tig0022413:65805-65824 Msa1400000:CDS 60.0%
TCCACCGCCACGTCAGCTAT+CGG - tig0022413:66093-66112 Msa1400000:CDS 60.0%
ACCACCGCCACCTCCGAATT+TGG - tig0022413:66174-66193 Msa1400000:CDS 60.0%
TGCGCCAAATTCGGAGGTGG+CGG + tig0022413:66181-66200 None:intergenic 60.0%
AGCTCAGCACCCAGACCTTC+AGG + tig0022413:68411-68430 None:intergenic 60.0%
!! GGTGGTGGTGCTGTACTCGC+TGG + tig0022413:65248-65267 None:intergenic 65.0%
!! ACGGTGGAGGGTGATGGTGG+TGG + tig0022413:65263-65282 None:intergenic 65.0%
! GTGACGGTGGAGGGTGATGG+TGG + tig0022413:65266-65285 None:intergenic 65.0%
GGTGTGACGGTGGAGGGTGA+TGG + tig0022413:65269-65288 None:intergenic 65.0%
! GGTGGTGGTGTGACGGTGGA+GGG + tig0022413:65275-65294 None:intergenic 65.0%
!! TGGTGGTGGTGTGACGGTGG+AGG + tig0022413:65276-65295 None:intergenic 65.0%
!! TGGTGGTGGTGGTGTGACGG+TGG + tig0022413:65279-65298 None:intergenic 65.0%
TCTTCCGACGACATCGCCGG+TGG + tig0022413:65812-65831 None:intergenic 65.0%
GATAGCTGACGTGGCGGTGG+AGG + tig0022413:66094-66113 None:intergenic 65.0%
TCCGATAGCTGACGTGGCGG+TGG + tig0022413:66097-66116 None:intergenic 65.0%
! GCCAAATTCGGAGGTGGCGG+TGG + tig0022413:66178-66197 None:intergenic 65.0%
!! GGTGGTGGTGGTGGAGTAGG+AGG + tig0022413:66262-66281 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGAGT+AGG + tig0022413:66265-66284 None:intergenic 65.0%
! ATTGGAGGTGGCGGTGGAGG+TGG + tig0022413:66286-66305 None:intergenic 65.0%
! GTCATTGGAGGTGGCGGTGG+AGG + tig0022413:66289-66308 None:intergenic 65.0%
! CGTGTCATTGGAGGTGGCGG+TGG + tig0022413:66292-66311 None:intergenic 65.0%
ATCAGTGTCGCCGACACCGG+TGG - tig0022413:66315-66334 Msa1400000:intron 65.0%
!! GGAGGTGGTGGTGGTGGTGG+TGG + tig0022413:66271-66290 None:intergenic 70.0%
!! GGTGGAGGTGGTGGTGGTGG+TGG + tig0022413:66274-66293 None:intergenic 70.0%
!! GGCGGTGGAGGTGGTGGTGG+TGG + tig0022413:66277-66296 None:intergenic 75.0%
! GGTGGCGGTGGAGGTGGTGG+TGG + tig0022413:66280-66299 None:intergenic 75.0%
! GGAGGTGGCGGTGGAGGTGG+TGG + tig0022413:66283-66302 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0022413 gene 64934 70066 64934 ID=Msa1400000;Name=Msa1400000
tig0022413 mRNA 64934 70066 64934 ID=Msa1400000-mRNA-1;Parent=Msa1400000;Name=Msa1400000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=164|1|1|1|1|1|4|538|915
tig0022413 exon 64934 66266 64934 ID=Msa1400000-mRNA-1:exon:17522;Parent=Msa1400000-mRNA-1
tig0022413 exon 66356 66597 66356 ID=Msa1400000-mRNA-1:exon:17521;Parent=Msa1400000-mRNA-1
tig0022413 exon 68072 68283 68072 ID=Msa1400000-mRNA-1:exon:17520;Parent=Msa1400000-mRNA-1
tig0022413 exon 68404 70066 68404 ID=Msa1400000-mRNA-1:exon:17519;Parent=Msa1400000-mRNA-1
tig0022413 five_prime_UTR 69903 70066 69903 ID=Msa1400000-mRNA-1:five_prime_utr;Parent=Msa1400000-mRNA-1
tig0022413 CDS 68404 69902 68404 ID=Msa1400000-mRNA-1:cds;Parent=Msa1400000-mRNA-1
tig0022413 CDS 68072 68283 68072 ID=Msa1400000-mRNA-1:cds;Parent=Msa1400000-mRNA-1
tig0022413 CDS 66356 66597 66356 ID=Msa1400000-mRNA-1:cds;Parent=Msa1400000-mRNA-1
tig0022413 CDS 65472 66266 65472 ID=Msa1400000-mRNA-1:cds;Parent=Msa1400000-mRNA-1
tig0022413 three_prime_UTR 64934 65471 64934 ID=Msa1400000-mRNA-1:three_prime_utr;Parent=Msa1400000-mRNA-1
Gene Sequence

>Msa1400000

ATGAAACCTCATAATTCAAGCTTCAACATCACCATCATAATCTTCATCATCTTCTTCTTCTTCTCATCACTATCTGTTAACACTGCAAAACGTTTCAATGAATCCGATCATCATCACACAAGAAGAATTCTCCATCAACCATTATTCCCAGCGAGTACAGCACCACCACCATCACCCTCCACCGTCACACCACCACCACCACAACCTTCCTCCGACAACATTCCATTCTTCCATGAATATCCAGACGCACCACCGTCGAATCAGAATCAAGCAGCACCGTTAACTTCTAACGCTACAACAGCGAATCCAACGGCAACACAACCAGCAAAAGGAACAAAAAAAGTAGCTATAGCAATCTCCGTTGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTTTATACAAACACAGAGCAAAAAACGCTGCGGATACACAGAAGCTAGTGAGTACTTCCACACAGAGGAACAATTCTCTTCAAGATTCATCAAATTCATCTGCTCCGGTAGTAGCTTCGAATTTTCTCTACATTGGAACTGTGGAACCTTCGAGAAGGTCAACGACGGTCAACGATCAGAATCAACCGGAGAAGCCTAACCGTTCACCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGACCGAGTCCGGAGTTACAGCCAATGCCGCCGTTAAGTAAACCTCCAAACGGAAACATTCCACCGGCGATGTCGTCGGAAGAAGATTCCGACGAAGAAAGTAACGAAACGGCGTTTCATTCGCCGCAGAATTCTTCGGTAAGTCAGGAAGATGGATTTTACACGCCGTATTCAGTTTCACGGCAGAGTTCTCTCAGTAACGGTAGTCCGGCGAAGAAAGAAAGTAATTCGACGGTTACACCGCTTCCGAAATCGAAAAGAACTTCGCCGAAATCGAAATCTGCTCTTTCTGCTTCTTCTCCTGATATTCGACACGTCATCATTCCTTCTATCAAGCAAACTCCTCCACCGCCACGTCAGCTATCGGAGAAACAGTTAACCTCCTCCGATGGAGTAGGACATTCAAGAAAACCGAAATTCTCAGCACCACCGCCACCTCCGAATTTGGCGCATCTTCAATCAACAACTAATACATTTTCACACGTGTCTAAAACTTCACATAATCATCATCCTCCTACTCCACCACCACCACCACCACCTCCACCGCCACCTCCAATGACACGAAAATCAGTGTCGCCGACACCGGTGGTTTCGAATTCTTCTGCATCTATAAGGAGGTTAAGTGAAGGAGGTGGTTCTGTTGGTAGTGTAAGAAAAGGTTCAGAATCAGTTTCAGATCACGTTGATGAGAGTTTGAATTTGAGATCTTCTTCTTCCGAGAGGCTTGTTGAAGAAGCTAATGAAACGGAAGGTGGAAAACCGAAGTTGAAAGCATTGCATTGGGACAAAGTTCGTGCAACTTCTGATCGTGCTACTGTGTGGGACCAAATAAAATCAAGCTCGTTTCAATTAAATGAAGATATGATGGAGTCTTTGTTTGGTTGCAACAATGGAACAAATTCAGCTCCAAAACCAAAAGAACAAGGTGTTAGAAAATCAGTTCTTCCTTCTGTTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAAAATATAGCTATACTGTTAAGGGCACTGAATGTGACAAGAGATGAAGTTTCTGAAGCTCTTTTGGATGGGAGTCCTGAAGGTCTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTGAAAAACTATGACGGCGACCTTTCGAAACTTGGACCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCATTCAAAAGAGTTGAAGCTATGCTATACAGGGCCAACTTCGATTCAGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTTGAGGCAGCAAGTGAGGAATTAAGGAATAGCCGGTTATTCTTCAAACTCCTGGAAGCTGTTCTCAGAACAGGAAATAGAATGAATGTTGGTACTAATCGAGGTGACGCTAAAGCTTTCAAACTCGACACACTCCTGAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTACACTTTGTGGTCCAAGAGATCATTAGGTCTGAAGGTGCAGAAACTGCATCTGCAAACGGAAGTATACCCAACCAAATGGACTCCAAATTTAACGAGGAAGAGTTTAAGAAGAACGGATTGCATGTTGTGGCTGGTCTCAGTAAAGACCTTGGTAATGTCAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGATCGGTTTTGCAATATGAGAAACCAGATATGAGAGGCAATTTCTTCAACTCCACAAAGCTCTTTTTGAAATACGCAGAAGAAGAAATTGTGAGGATTAAGGCTCATGAGAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCTGCAAAGGAAGAAGCGCACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTTGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCATTCAGAATAGCTTCAAATGCACCATTGCCTGTTCTTAACAGGTACAATGGGAGACAAGATAGAAGCTCAGATGAGGAAAGCTCATCCCCTTAG
Protein sequence

>Msa1400000

MKPHNSSFNITIIIFIIFFFFSSLSVNTAKRFNESDHHHTRRILHQPLFPASTAPPPSPSTVTPPPPQPSSDNIPFFHEYPDAPPSNQNQAAPLTSNATTANPTATQPAKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKNAADTQKLVSTSTQRNNSLQDSSNSSAPVVASNFLYIGTVEPSRRSTTVNDQNQPEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPNGNIPPAMSSEEDSDEESNETAFHSPQNSSVSQEDGFYTPYSVSRQSSLSNGSPAKKESNSTVTPLPKSKRTSPKSKSALSASSPDIRHVIIPSIKQTPPPPRQLSEKQLTSSDGVGHSRKPKFSAPPPPPNLAHLQSTTNTFSHVSKTSHNHHPPTPPPPPPPPPPPPMTRKSVSPTPVVSNSSASIRRLSEGGGSVGSVRKGSESVSDHVDESLNLRSSSSERLVEEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNGTNSAPKPKEQGVRKSVLPSVDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGSPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETASANGSIPNQMDSKFNEEEFKKNGLHVVAGLSKDLGNVKKAAGMDSDVLSSYVTKLETGLEKVRSVLQYEKPDMRGNFFNSTKLFLKYAEEEIVRIKAHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGRQDRSSDEESSSP*