AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268650 MtrunA17_Chr5g0401341 98.571 630 9 0 1 630 1 630 0.0 1286
Msa1268650 MtrunA17_Chr1g0207461 62.166 637 222 9 1 630 1 625 0.0 766
Msa1268650 MtrunA17_Chr1g0150191 50.078 645 279 13 1 630 1 617 0.0 572
Msa1268650 MtrunA17_Chr8g0367891 43.243 629 280 17 1 593 1 588 2.12e-145 434
Msa1268650 MtrunA17_Chr5g0412591 40.775 645 295 14 1 599 1 604 4.50e-138 416
Msa1268650 MtrunA17_Chr4g0076521 42.659 504 253 8 1 490 1 482 1.18e-134 407
Msa1268650 MtrunA17_Chr4g0050021 38.737 586 305 12 5 545 23 599 3.92e-134 408
Msa1268650 MtrunA17_Chr2g0279481 38.682 592 303 11 5 545 23 605 3.68e-130 398
Msa1268650 MtrunA17_Chr2g0303541 42.164 536 273 11 1 508 1 527 8.10e-128 390
Msa1268650 MtrunA17_Chr2g0290741 39.721 501 262 8 1 490 1 472 3.84e-118 363
Msa1268650 MtrunA17_Chr2g0285511 38.018 555 310 13 1 535 1 541 1.15e-108 340
Msa1268650 MtrunA17_Chr8g0382231 32.872 578 282 14 11 545 38 552 7.59e-103 325
Msa1268650 MtrunA17_Chr1g0181181 38.031 518 261 11 1 490 1 486 2.47e-102 322
Msa1268650 MtrunA17_Chr2g0320691 38.048 502 277 9 27 500 23 518 2.71e-102 324
Msa1268650 MtrunA17_Chr5g0401451 34.455 624 362 15 24 630 37 630 6.41e-102 323
Msa1268650 MtrunA17_Chr4g0010091 38.289 491 275 10 19 492 21 500 1.43e-101 322
Msa1268650 MtrunA17_Chr4g0053841 36.550 487 287 7 24 501 10 483 6.09e-99 314
Msa1268650 MtrunA17_Chr8g0374011 36.328 512 264 11 22 483 15 514 8.41e-94 302
Msa1268650 MtrunA17_Chr1g0199631 39.224 464 252 13 45 487 8 462 3.25e-93 298
Msa1268650 MtrunA17_Chr1g0195911 35.714 490 273 9 25 492 34 503 1.51e-92 298
Msa1268650 MtrunA17_Chr7g0245201 35.907 518 287 14 23 515 57 554 4.29e-89 290
Msa1268650 MtrunA17_Chr7g0268781 34.247 511 290 11 25 510 34 523 5.18e-84 276
Msa1268650 MtrunA17_Chr3g0108331 34.304 481 266 9 26 491 23 468 2.00e-83 273
Msa1268650 MtrunA17_Chr1g0191711 31.148 488 279 8 28 503 59 501 1.07e-74 249
Msa1268650 MtrunA17_Chr5g0432861 30.972 494 282 9 26 497 24 480 2.13e-71 241
Msa1268650 MtrunA17_Chr2g0332281 39.298 285 145 4 212 483 24 293 5.01e-55 193
Msa1268650 MtrunA17_Chr4g0003891 39.223 283 146 5 212 483 46 313 3.77e-53 188
Msa1268650 MtrunA17_Chr1g0163311 26.875 480 295 12 30 481 6 457 3.37e-44 166
Msa1268650 MtrunA17_Chr4g0023801 26.362 459 293 11 36 481 14 440 8.44e-37 144
Msa1268650 MtrunA17_Chr4g0037661 24.187 492 318 9 28 488 4 471 1.32e-34 138
Msa1268650 MtrunA17_Chr2g0280541 26.247 381 251 9 94 469 3 358 9.86e-28 116
Msa1268650 MtrunA17_Chr1g0206621 36.000 150 92 2 31 177 72 220 9.49e-23 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268650 AT2G14820.2 59.000 600 216 9 1 589 1 581 0.0 689
Msa1268650 AT2G14820.1 59.000 600 216 9 1 589 1 581 0.0 689
Msa1268650 AT4G37590.1 55.250 619 193 17 1 600 1 554 0.0 634
Msa1268650 AT5G67440.3 56.180 623 198 15 1 611 1 560 0.0 631
Msa1268650 AT5G67440.1 56.180 623 198 15 1 611 1 560 0.0 631
Msa1268650 AT5G67440.2 53.846 585 189 16 42 611 5 523 0.0 557
Msa1268650 AT2G23050.1 57.460 496 164 8 1 489 1 456 0.0 543
Msa1268650 AT4G31820.1 46.700 606 254 13 1 602 1 541 2.02e-175 511
Msa1268650 AT1G67900.5 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT1G67900.1 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT1G67900.3 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT1G67900.6 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT1G67900.2 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT1G67900.4 43.701 643 289 15 1 592 1 621 1.99e-158 469
Msa1268650 AT4G31820.2 45.307 554 232 14 54 602 1 488 1.38e-146 435
Msa1268650 AT2G23050.2 54.737 380 131 7 111 489 1 340 8.53e-131 389
Msa1268650 AT3G26490.1 42.344 529 261 12 1 495 1 519 5.04e-127 387
Msa1268650 AT3G26490.3 42.344 529 261 12 1 495 1 519 5.04e-127 387
Msa1268650 AT3G26490.4 42.344 529 261 12 1 495 1 519 5.04e-127 387
Msa1268650 AT5G47800.3 39.686 509 270 9 1 494 1 487 2.53e-123 377
Msa1268650 AT5G47800.1 39.686 509 270 9 1 494 1 487 2.53e-123 377
Msa1268650 AT5G47800.4 39.686 509 270 9 1 494 1 487 2.53e-123 377
Msa1268650 AT5G03250.1 40.926 540 280 14 1 514 1 527 1.53e-121 373
Msa1268650 AT5G47800.2 39.489 509 271 8 1 494 114 600 2.05e-121 375
Msa1268650 AT1G30440.1 38.930 542 290 10 1 509 1 534 3.31e-119 369
Msa1268650 AT5G13600.1 40.039 507 274 10 1 487 1 497 8.51e-110 343
Msa1268650 AT3G44820.1 36.599 541 299 11 8 512 5 537 3.32e-100 319
Msa1268650 AT3G26490.2 40.987 466 231 12 1 432 1 456 4.57e-100 314
Msa1268650 AT5G67385.1 39.278 471 257 9 24 483 22 474 1.76e-98 313
Msa1268650 AT5G48800.1 39.030 474 266 8 22 489 36 492 3.92e-96 308
Msa1268650 AT1G03010.2 35.507 552 305 11 25 546 7 537 9.30e-94 301
Msa1268650 AT1G03010.3 35.432 556 308 11 21 546 29 563 1.43e-93 301
Msa1268650 AT1G03010.1 35.507 552 305 11 25 546 34 564 2.36e-93 301
Msa1268650 AT5G66560.1 34.629 566 271 13 22 505 14 562 1.50e-90 295
Msa1268650 AT2G47860.1 37.060 483 257 11 25 483 35 494 2.88e-90 293
Msa1268650 AT5G10250.2 33.398 515 258 9 11 483 35 506 1.88e-88 288
Msa1268650 AT3G08660.1 36.759 506 273 16 23 515 30 501 6.30e-88 285
Msa1268650 AT5G67385.4 38.479 447 246 9 48 483 1 429 2.12e-87 283
Msa1268650 AT5G67385.5 38.479 447 246 9 48 483 1 429 2.12e-87 283
Msa1268650 AT5G67385.2 38.479 447 246 9 48 483 1 429 2.12e-87 283
Msa1268650 AT5G67385.3 38.479 447 246 9 48 483 1 429 2.12e-87 283
Msa1268650 AT5G10250.1 33.996 503 256 10 11 483 35 491 1.83e-86 282
Msa1268650 AT5G66560.3 34.489 548 260 13 40 505 3 533 6.42e-86 281
Msa1268650 AT2G47860.3 35.375 506 257 12 25 483 35 517 6.21e-85 279
Msa1268650 AT3G08570.1 34.647 482 285 10 23 489 30 496 2.71e-83 274
Msa1268650 AT5G66560.4 36.632 475 247 11 68 505 66 523 1.72e-82 272
Msa1268650 AT3G50840.1 36.420 486 248 11 22 483 11 459 1.17e-81 268
Msa1268650 AT5G03250.2 38.642 427 227 11 111 514 1 415 1.56e-81 265
Msa1268650 AT2G30520.1 34.656 479 258 8 24 483 27 469 2.80e-80 265
Msa1268650 AT3G08660.3 36.421 475 255 16 54 515 1 441 2.48e-78 258
Msa1268650 AT3G49970.1 35.240 437 226 9 40 468 7 394 2.36e-75 250
Msa1268650 AT3G49970.2 35.240 437 226 9 40 468 7 394 2.36e-75 250
Msa1268650 AT2G30520.2 34.211 456 245 8 47 483 2 421 4.49e-72 242
Msa1268650 AT2G30520.3 34.211 456 245 8 47 483 2 421 4.49e-72 242
Msa1268650 AT3G50840.2 35.435 460 236 11 48 483 1 423 2.79e-70 237
Msa1268650 AT3G50840.3 35.435 460 236 11 48 483 1 423 2.79e-70 237
Msa1268650 AT2G47860.4 34.862 436 237 11 21 432 31 443 5.00e-68 229
Msa1268650 AT3G08660.2 36.364 418 226 13 23 432 30 415 1.03e-65 222
Msa1268650 AT2G47860.6 33.115 459 237 12 21 432 31 466 7.19e-63 216
Msa1268650 AT5G66560.2 32.505 483 237 12 22 432 14 479 1.56e-62 215
Msa1268650 AT5G64330.2 40.959 271 137 6 7 259 33 298 2.16e-60 213
Msa1268650 AT5G64330.2 40.996 261 123 3 270 499 373 633 1.18e-53 195
Msa1268650 AT5G64330.1 40.959 271 137 6 7 259 33 298 6.31e-60 214
Msa1268650 AT5G64330.1 39.130 299 156 5 270 545 373 668 2.21e-55 201
Msa1268650 AT2G47860.5 35.000 400 209 10 111 483 1 376 7.60e-60 209
Msa1268650 AT2G47860.2 35.000 400 209 10 111 483 1 376 7.60e-60 209
Msa1268650 AT5G48130.1 28.427 496 298 13 25 502 37 493 1.55e-56 202
Msa1268650 AT5G64330.3 40.996 261 123 3 270 499 314 574 4.79e-54 195
Msa1268650 AT5G64330.3 40.083 242 122 6 37 259 2 239 1.05e-49 182
Msa1268650 AT1G52770.1 33.616 354 199 6 212 545 28 365 3.27e-52 186
Msa1268650 AT3G15570.1 34.007 297 158 6 212 485 29 310 4.41e-45 167
Msa1268650 AT5G17580.2 27.443 481 316 8 14 487 7 461 5.73e-43 163
Msa1268650 AT5G17580.1 27.837 467 304 8 28 487 6 446 8.19e-42 159
Msa1268650 AT3G19850.1 24.887 442 292 8 68 490 52 472 1.50e-40 156
Msa1268650 AT1G50280.1 24.841 471 317 11 29 477 5 460 7.36e-39 150
Msa1268650 AT1G50280.2 25.647 425 286 9 68 477 18 427 1.13e-38 149
Msa1268650 AT3G03510.1 28.814 413 234 10 76 483 4 361 3.37e-38 147
Msa1268650 AT3G22104.1 25.495 455 286 15 28 468 5 420 3.67e-28 119
Msa1268650 AT3G22104.4 24.474 380 240 11 98 468 4 345 2.15e-19 91.7
Msa1268650 AT3G22104.2 24.474 380 240 11 98 468 4 345 2.15e-19 91.7
Msa1268650 AT3G22104.3 24.474 380 240 11 98 468 4 345 2.15e-19 91.7
Msa1268650 AT3G49900.1 41.837 98 50 4 387 482 214 306 2.27e-14 76.6
Msa1268650 AT3G49900.2 40.594 101 50 5 387 482 214 309 1.08e-12 71.2

Find 222 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATATTGTTTCAGGTTTA+TGG 0.106681 8_3:-1718531 None:intergenic
TGCCATTGACATGTATTTAA+AGG 0.151112 8_3:+1722529 Msa1268650:CDS
CCACTTTCTCTCTCAACTTA+TGG 0.174156 8_3:-1718272 None:intergenic
GGTGATTTGAAAAGCTATTT+TGG 0.174997 8_3:+1719528 Msa1268650:five_prime_UTR
CACAAAGAATAGATTATTAT+TGG 0.178237 8_3:+1722055 Msa1268650:CDS
GAAAACACAGATATTGTTTC+AGG 0.209047 8_3:-1718538 None:intergenic
CGGTTTATTGCCGGTAGATA+TGG 0.212856 8_3:+1722088 Msa1268650:CDS
TTTATCTTGGCCGGTCTCTT+TGG 0.239494 8_3:+1719260 Msa1268650:five_prime_UTR
CACAAACTCTTAACCAAGTT+TGG 0.239988 8_3:-1719500 None:intergenic
ACAACCAATGGAAATGTTTC+CGG 0.248773 8_3:+1721948 Msa1268650:CDS
GAACATGTTGCTTACTAAAA+TGG 0.270449 8_3:-1719292 None:intergenic
AAGCTTAGAGAATAACTTCT+TGG 0.287524 8_3:-1723110 None:intergenic
AAAATTATGTTTCTGAATCT+TGG 0.287780 8_3:-1719083 None:intergenic
AGAAACAAAGAAAGGGAAAA+AGG 0.292827 8_3:+1718198 None:intergenic
AAGTGGGAACATTCTGAAAT+TGG 0.292864 8_3:+1718289 Msa1268650:five_prime_UTR
CATTGTTGCAATTTATTTGC+AGG 0.311860 8_3:+1723727 Msa1268650:three_prime_UTR
AGATCAAAGTAGAAGATAAA+AGG 0.321417 8_3:-1719445 None:intergenic
TGAATGTTGAGTATGGAATT+TGG 0.329924 8_3:+1718964 Msa1268650:five_prime_UTR
CTGATCTTCCCGGTTCCATC+AGG 0.334384 8_3:+1722849 Msa1268650:CDS
TTCGATGGAAGACGAATTGC+AGG 0.353029 8_3:+1722331 Msa1268650:CDS
CTGACATAGTTGTTAATGTT+GGG 0.360244 8_3:+1721171 Msa1268650:CDS
CAACCAATGGAAATGTTTCC+GGG 0.363516 8_3:+1721949 Msa1268650:CDS
GAAGTATTTGATACCATCTT+GGG 0.363641 8_3:-1722365 None:intergenic
CAAAAGATGAGGCTTGAAAA+AGG 0.364405 8_3:-1718376 None:intergenic
AAAATGATGGAGATAATGTT+AGG 0.372524 8_3:+1719613 Msa1268650:CDS
AGAAGTTATTCTCTAAGCTT+TGG 0.373875 8_3:+1723113 Msa1268650:CDS
GACTATTGTCGGTTTATTGC+CGG 0.376124 8_3:+1722079 Msa1268650:CDS
CGACCATGGAAGAAGTGATT+TGG 0.379163 8_3:-1721691 None:intergenic
CAAACTTGGTTAAGAGTTTG+TGG 0.383904 8_3:+1719501 Msa1268650:five_prime_UTR
ATGCAATGCCCTGATGGAAC+CGG 0.384464 8_3:-1722858 None:intergenic
AGAATAACTTCTTGGACATA+AGG 0.384603 8_3:-1723102 None:intergenic
ATTCACATCCACGACATTCC+TGG 0.387097 8_3:+1721456 Msa1268650:CDS
ATTGAAAGTGGCTATTCAAC+TGG 0.388498 8_3:+1722142 Msa1268650:CDS
AAGGTTGCCTGGTTTCAATA+AGG 0.390063 8_3:+1722010 Msa1268650:CDS
CGAAGTATTTGATACCATCT+TGG 0.390134 8_3:-1722366 None:intergenic
TTGCCTAGTGTAGTTTGTAT+TGG 0.395707 8_3:+1723615 Msa1268650:three_prime_UTR
TCCTTTACGTGTCGTTGTAC+AGG 0.397548 8_3:+1722766 Msa1268650:CDS
CGGCCAAGATAAACCATGTT+AGG 0.398977 8_3:-1719250 None:intergenic
TCTTCCACCCACCAATCCTT+TGG 0.399577 8_3:-1721876 None:intergenic
AAATACTTCGAGCAAGATAA+AGG 0.402925 8_3:+1722379 Msa1268650:CDS
AACAATGACGGTGGTGGTAT+AGG 0.404070 8_3:+1723040 Msa1268650:CDS
TCGATCACTTTGGTAGCATT+AGG 0.404204 8_3:+1723311 Msa1268650:three_prime_UTR
GCACATATTTCAAAAGCAAC+AGG 0.406384 8_3:-1721483 None:intergenic
AAGAAACACAAAGGTTTAGT+TGG 0.408170 8_3:-1718499 None:intergenic
ATCTAACTAGCCTTGGTTTG+TGG 0.408714 8_3:+1719383 Msa1268650:five_prime_UTR
TCTAACTAGCCTTGGTTTGT+GGG 0.409928 8_3:+1719384 Msa1268650:five_prime_UTR
TGATTATAGTACAACAAAAC+CGG 0.410417 8_3:-1723461 None:intergenic
TGGTTAAGAGTTTGTGGAGT+AGG 0.420229 8_3:+1719507 Msa1268650:five_prime_UTR
AGGTTGCCTGGTTTCAATAA+GGG 0.420841 8_3:+1722011 Msa1268650:CDS
TCTCCTAACATGGTTTATCT+TGG 0.424055 8_3:+1719247 Msa1268650:five_prime_UTR
TAGTGTGTGAATGTTGAGTA+TGG 0.431493 8_3:+1718957 Msa1268650:five_prime_UTR
GAAAAGAATATGTAGGTTGA+TGG 0.432349 8_3:+1722688 Msa1268650:CDS
ACGAGCACTCCTGATCTTCC+CGG 0.435726 8_3:+1722839 Msa1268650:CDS
CTCGCTGAAGTTATTGAAAG+TGG 0.436588 8_3:+1722130 Msa1268650:CDS
CATATATTTGTTCAGGTATG+TGG 0.437799 8_3:+1721133 Msa1268650:intron
AAACTGAGAAGAGGCAGATT+AGG 0.438663 8_3:-1722446 None:intergenic
GGTTTATTGCCGGTAGATAT+GGG 0.439454 8_3:+1722089 Msa1268650:CDS
CTGATGGAACCGGGAAGATC+AGG 0.442940 8_3:-1722848 None:intergenic
AACAGTAGAAGCAGGGCTTT+CGG 0.443529 8_3:-1723179 None:intergenic
CTTGGTTTGTGGGAAAGATT+CGG 0.444335 8_3:+1719394 Msa1268650:five_prime_UTR
AAGATGAAGTTTATGAAACT+TGG 0.446570 8_3:+1719570 Msa1268650:exon
GAATGTCTCCTACTTCTAGA+TGG 0.446578 8_3:-1723223 None:intergenic
CCATAAGTTGAGAGAGAAAG+TGG 0.447068 8_3:+1718272 Msa1268650:five_prime_UTR
GTGGTTCTCACGGTAGTTCA+AGG 0.447533 8_3:+1722885 Msa1268650:CDS
AAATTTCATCTAACTAGCCT+TGG 0.450635 8_3:+1719376 Msa1268650:five_prime_UTR
AAAAGCTCCCATCGGAAAAT+GGG 0.457088 8_3:+1721811 Msa1268650:CDS
AACAAAACCGGGTCCCTCAT+AGG 0.460036 8_3:-1723449 None:intergenic
TTATTATTGGAGACTATTGT+CGG 0.461332 8_3:+1722068 Msa1268650:CDS
CATTGGTTGTAATAGTTGAC+AGG 0.463502 8_3:-1721935 None:intergenic
AGTGGTCATACACATATAAC+AGG 0.463792 8_3:+1721787 Msa1268650:CDS
TTTGTTGTTGTTTCCAACAA+TGG 0.469010 8_3:-1719052 None:intergenic
TCCTCAACAACAGTAGAAGC+AGG 0.469108 8_3:-1723187 None:intergenic
CCACTTAAGATGAGCCTATG+AGG 0.469406 8_3:+1723435 Msa1268650:three_prime_UTR
TGCTGTTTCTGTCACTACTC+TGG 0.469581 8_3:-1723015 None:intergenic
GATGTACGAGACCATTGAAA+AGG 0.472920 8_3:+1721584 Msa1268650:CDS
ATCCCATTCCTCTTCTGTGT+TGG 0.473339 8_3:-1722918 None:intergenic
GTTGGTAATGTCTCCTAACA+TGG 0.479028 8_3:+1719237 Msa1268650:five_prime_UTR
TGAGGTATGATGGTTGTTTG+TGG 0.480322 8_3:+1723381 Msa1268650:three_prime_UTR
AACTAATGGTTCCAAAGGAT+TGG 0.481019 8_3:+1721865 Msa1268650:CDS
GCCTATCCTCCGCATCAGTT+CGG 0.483793 8_3:-1722186 None:intergenic
CTAACATGGTTTATCTTGGC+CGG 0.484256 8_3:+1719251 Msa1268650:five_prime_UTR
CCGTAGCCTCCTCAAGCCTC+TGG 0.484339 8_3:-1722208 None:intergenic
TTCCTCTTCTGTGTTGGTCG+TGG 0.488018 8_3:-1722912 None:intergenic
GTGGTGTCTAAATCCATTGT+TGG 0.491175 8_3:+1719039 Msa1268650:five_prime_UTR
ATGAATGTGTTTGTGTGTGT+TGG 0.492957 8_3:+1719200 Msa1268650:five_prime_UTR
ATGTACGAGACCATTGAAAA+GGG 0.494912 8_3:+1721585 Msa1268650:CDS
AAGACGTAAAAGTTCTGAAA+GGG 0.496037 8_3:+1722957 Msa1268650:CDS
AGCTTCTCCGACAACTGCCC+CGG 0.496223 8_3:-1721967 None:intergenic
CCTCATAGGCTCATCTTAAG+TGG 0.498922 8_3:-1723435 None:intergenic
AACCTTTAAATACATGTCAA+TGG 0.499724 8_3:-1722531 None:intergenic
CATAGCTACCAAGGCTTCGA+TGG 0.501566 8_3:+1721749 Msa1268650:CDS
GGGAACATTCTGAAATTGGT+TGG 0.502141 8_3:+1718293 Msa1268650:five_prime_UTR
TATGTTATGCAGGAACATCC+TGG 0.502662 8_3:+1722647 Msa1268650:intron
TGTATAATCGTCGATCACTT+TGG 0.503342 8_3:+1723301 Msa1268650:three_prime_UTR
GCTTCAACAACATCATCATC+AGG 0.503463 8_3:+1722812 Msa1268650:CDS
ATATGTGCAAAGTTCTGTTA+TGG 0.503531 8_3:+1721498 Msa1268650:CDS
GACTGTGGCTTGAGGTATGA+TGG 0.504805 8_3:+1723371 Msa1268650:three_prime_UTR
GTGAGAGGAAAAGAATATGT+AGG 0.505622 8_3:+1722681 Msa1268650:CDS
GACCAACACAGAAGAGGAAT+GGG 0.506254 8_3:+1722916 Msa1268650:CDS
TGAACTACCGTGAGAACCAC+CGG 0.506443 8_3:-1722882 None:intergenic
CGGTGTGAGGAAACAACTAA+TGG 0.506709 8_3:+1721851 Msa1268650:CDS
AATCTACGCCATCTAGAAGT+AGG 0.507067 8_3:+1723215 Msa1268650:CDS
ACCGGGATGCAATGCCCTGA+TGG 0.507424 8_3:-1722864 None:intergenic
TCCTGAAAATGCTGGAGTTG+AGG 0.508475 8_3:-1721635 None:intergenic
TGCCCCGGAAACATTTCCAT+TGG 0.509798 8_3:-1721952 None:intergenic
CTGTCAACTATTACAACCAA+TGG 0.510029 8_3:+1721936 Msa1268650:CDS
ACCTGTACAACGACACGTAA+AGG 0.510885 8_3:-1722767 None:intergenic
TATGACCACTCCACCTTGGA+TGG 0.511110 8_3:-1721774 None:intergenic
TCAAAAGCAACAGGTCCTCC+AGG 0.511400 8_3:-1721474 None:intergenic
CATCGAAGCCTTGGTAGCTA+TGG 0.511487 8_3:-1721748 None:intergenic
AATGTTTCCGGGGCAGTTGT+CGG 0.511899 8_3:+1721960 Msa1268650:CDS
TTTAATAGAGAGTGGGGCGG+TGG 0.512625 8_3:+1719103 Msa1268650:five_prime_UTR
CGACCAACACAGAAGAGGAA+TGG 0.512670 8_3:+1722915 Msa1268650:CDS
CAGGTATGTGGCAACTGAGC+TGG 0.513876 8_3:+1721145 Msa1268650:intron
CCCTGCTTCTACTGTTGTTG+AGG 0.513974 8_3:+1723186 Msa1268650:CDS
ATTGTTGCAATTTATTTGCA+GGG 0.515311 8_3:+1723728 Msa1268650:three_prime_UTR
GGTTAATGAGAAACAAAGAA+AGG 0.515408 8_3:+1718190 None:intergenic
TTTCCAGCTCCTGAAAATGC+TGG 0.516969 8_3:-1721643 None:intergenic
CAACCAAATCACTTCTTCCA+TGG 0.518084 8_3:+1721688 Msa1268650:CDS
GGATGGATCCATCGAAGCCT+TGG 0.518873 8_3:-1721757 None:intergenic
TCTGACATAGTTGTTAATGT+TGG 0.523484 8_3:+1721170 Msa1268650:CDS
GTTAATGAGAAACAAAGAAA+GGG 0.524317 8_3:+1718191 None:intergenic
TCCATCAGGGCATTGCATCC+CGG 0.525817 8_3:+1722863 Msa1268650:CDS
TACACCTCTAGAAGGTTGCC+TGG 0.530328 8_3:+1721999 Msa1268650:CDS
ATCTTAAGTTCCTCCGACCA+TGG 0.530439 8_3:-1721705 None:intergenic
TGCAATGCCCTGATGGAACC+GGG 0.532513 8_3:-1722857 None:intergenic
AGGAAAGCTTGATACCAAAT+CGG 0.533858 8_3:-1722480 None:intergenic
TAATGGTTCCAAAGGATTGG+TGG 0.538641 8_3:+1721868 Msa1268650:CDS
CCAGAGGCTTGAGGAGGCTA+CGG 0.540725 8_3:+1722208 Msa1268650:CDS
TTGCCGGTAGATATGGGAAG+TGG 0.543251 8_3:+1722095 Msa1268650:CDS
TATGTAGGTTGATGGACTGC+AGG 0.549606 8_3:+1722696 Msa1268650:CDS
GTAGCTGCTAACAAAATGAA+AGG 0.551181 8_3:+1723076 Msa1268650:CDS
TTGCATCCCGGTGGTTCTCA+CGG 0.551268 8_3:+1722875 Msa1268650:CDS
TCCGAACTGATGCGGAGGAT+AGG 0.560564 8_3:+1722185 Msa1268650:CDS
GGGAAAGATTCGGTCATACA+AGG 0.565114 8_3:+1719404 Msa1268650:five_prime_UTR
ACTAACTAGAATCAAATGCT+AGG 0.566777 8_3:+1723587 Msa1268650:three_prime_UTR
TGCAAAGTTCTGTTATGGTA+TGG 0.567366 8_3:+1721503 Msa1268650:CDS
TCTTTGTGATATCACCACTC+TGG 0.567643 8_3:-1722040 None:intergenic
TGTTGTACTATAATCAGAGA+AGG 0.567780 8_3:+1723468 Msa1268650:three_prime_UTR
GAAACAACTAATGGTTCCAA+AGG 0.569885 8_3:+1721860 Msa1268650:CDS
AGTTGCAGCTCGCTGTGCAG+CGG 0.570192 8_3:+1721551 Msa1268650:CDS
TAAGTGCGTACACCTCTAGA+AGG 0.571808 8_3:+1721991 Msa1268650:CDS
AGACCGTCATGAGACTGTCT+AGG 0.573268 8_3:-1722500 None:intergenic
GTGGTGTCAGATAGAACTAG+TGG 0.574514 8_3:+1719122 Msa1268650:five_prime_UTR
GAAGACGTAAAAGTTCTGAA+AGG 0.575342 8_3:+1722956 Msa1268650:CDS
TGACATAGTTGTTAATGTTG+GGG 0.576381 8_3:+1721172 Msa1268650:CDS
GTAACAAAGTCCAAAGAGAC+CGG 0.578877 8_3:-1719270 None:intergenic
AGATGAGCCTATGAGGGACC+CGG 0.580189 8_3:+1723442 Msa1268650:three_prime_UTR
GAGGATAGGCCAGAGGCTTG+AGG 0.582061 8_3:+1722199 Msa1268650:CDS
TGATCTTCCCGGTTCCATCA+GGG 0.583101 8_3:+1722850 Msa1268650:CDS
CACTTAAGATGAGCCTATGA+GGG 0.584475 8_3:+1723436 Msa1268650:three_prime_UTR
AATGGTTCCAAAGGATTGGT+GGG 0.585467 8_3:+1721869 Msa1268650:CDS
CAAAGGAATGGCAAAAGATG+AGG 0.585917 8_3:-1718387 None:intergenic
ACATGAACCAATCAAAGGAA+TGG 0.586672 8_3:-1718399 None:intergenic
TGTGTTTGTGTAGCTAGCTG+TGG 0.593299 8_3:+1718321 Msa1268650:five_prime_UTR
TATTGAGTCCATAGCTACCA+AGG 0.593774 8_3:+1721740 Msa1268650:CDS
GCTTTCGGACGTATCAGAGC+TGG 0.595171 8_3:-1723164 None:intergenic
GTTTGTGTAGCTAGCTGTGG+TGG 0.597001 8_3:+1718324 Msa1268650:five_prime_UTR
CTCGCTTATAGAGATCAAGT+TGG 0.598194 8_3:-1721911 None:intergenic
AAAATGGGAACGAAGCACAC+TGG 0.598218 8_3:+1721826 Msa1268650:CDS
GTTAGTTTCAAACACAGATG+AGG 0.598340 8_3:+1721422 Msa1268650:CDS
CAAATCACTTCTTCCATGGT+CGG 0.598798 8_3:+1721692 Msa1268650:CDS
TGGTGTCAGATAGAACTAGT+GGG 0.601505 8_3:+1719123 Msa1268650:five_prime_UTR
GAGCCACTTCCCATATCTAC+CGG 0.602916 8_3:-1722098 None:intergenic
AGCAACAACAATGACGGTGG+TGG 0.606571 8_3:+1723034 Msa1268650:CDS
AGAAGAGGAATGGGATGCTG+TGG 0.608026 8_3:+1722925 Msa1268650:CDS
GGCTTCGATGGATCCATCCA+AGG 0.608155 8_3:+1721761 Msa1268650:CDS
GAGGCTTGAGGAGGCTACGG+TGG 0.609045 8_3:+1722211 Msa1268650:CDS
AAACTACATGAACCAATCAA+AGG 0.610942 8_3:-1718404 None:intergenic
CGAATCTTTCCCACAAACCA+AGG 0.613263 8_3:-1719393 None:intergenic
GGAGATCAGAAGCCCCAAGA+TGG 0.614219 8_3:+1722352 Msa1268650:CDS
AGGAGTTCAAAGAAGGGACA+TGG 0.614723 8_3:+1718925 Msa1268650:intron
CATAAACATAAACATAAACA+AGG 0.615372 8_3:-1718430 None:intergenic
AAGTATTTGATACCATCTTG+GGG 0.615466 8_3:-1722364 None:intergenic
CGGTGAGATCCGAACTGATG+CGG 0.621378 8_3:+1722177 Msa1268650:CDS
GCCGCACTAAAACTATCAAG+TGG 0.621390 8_3:+1722986 Msa1268650:CDS
AAGCACACTGGAACGGTGTG+AGG 0.624811 8_3:+1721838 Msa1268650:CDS
CTGAGACTGACTGTGGCTTG+AGG 0.625186 8_3:+1723363 Msa1268650:three_prime_UTR
AAACCAATACAAACTACACT+AGG 0.625511 8_3:-1723618 None:intergenic
CAGGTCCTCCAGGAATGTCG+TGG 0.625588 8_3:-1721464 None:intergenic
GATTATAGTACAACAAAACC+GGG 0.627016 8_3:-1723460 None:intergenic
TGGATCCATCCAAGGTGGAG+TGG 0.627703 8_3:+1721769 Msa1268650:CDS
TGTGTATGACCACTCCACCT+TGG 0.631504 8_3:-1721778 None:intergenic
CTGGAATCAGCAAAAGTGAG+AGG 0.633326 8_3:+1722666 Msa1268650:CDS
TACCACGACCAACACAGAAG+AGG 0.634888 8_3:+1722910 Msa1268650:CDS
ACACGAGCATCAATCTTCGA+TGG 0.639556 8_3:+1722316 Msa1268650:CDS
ATGTTCACAAAACTGAGAAG+AGG 0.639567 8_3:-1722455 None:intergenic
GGGAACGAAGCACACTGGAA+CGG 0.640951 8_3:+1721831 Msa1268650:CDS
AGAAACAGCAACAACAATGA+CGG 0.642249 8_3:+1723028 Msa1268650:CDS
AATAAGGGTGTTATCCAGAG+TGG 0.642711 8_3:+1722026 Msa1268650:CDS
ATCACTTCTTCCATGGTCGG+AGG 0.648232 8_3:+1721695 Msa1268650:CDS
GGTGTCAGATAGAACTAGTG+GGG 0.648820 8_3:+1719124 Msa1268650:five_prime_UTR
TTGATATCAAAGAAACACAA+AGG 0.650391 8_3:-1718508 None:intergenic
GAAACCAGGCAACCTTCTAG+AGG 0.650655 8_3:-1722003 None:intergenic
GATATGGGAAGTGGCTCATG+CGG 0.650973 8_3:+1722104 Msa1268650:CDS
AGACGTAAAAGTTCTGAAAG+GGG 0.651354 8_3:+1722958 Msa1268650:CDS
TCAACTGGATTGTGAAGTGT+CGG 0.651439 8_3:+1722157 Msa1268650:CDS
CCTCAACAACAGTAGAAGCA+GGG 0.658156 8_3:-1723186 None:intergenic
GAACTACCGTGAGAACCACC+GGG 0.662467 8_3:-1722881 None:intergenic
GATAGGCCAGAGGCTTGAGG+AGG 0.663205 8_3:+1722202 Msa1268650:CDS
ATCAGGGCATTGCATCCCGG+TGG 0.664334 8_3:+1722866 Msa1268650:CDS
TGAGATCCGAACTGATGCGG+AGG 0.666675 8_3:+1722180 Msa1268650:CDS
ATAACACCCTTATTGAAACC+AGG 0.668210 8_3:-1722017 None:intergenic
AACCAATGGAAATGTTTCCG+GGG 0.669317 8_3:+1721950 Msa1268650:CDS
GGTTCCAAAGGATTGGTGGG+TGG 0.674076 8_3:+1721872 Msa1268650:CDS
CATAAGTTGAGAGAGAAAGT+GGG 0.674517 8_3:+1718273 Msa1268650:five_prime_UTR
CGCTTAACCTAACAAAACAG+TGG 0.676154 8_3:-1723661 None:intergenic
TTTCCTAGACAGTCTCATGA+CGG 0.681338 8_3:+1722497 Msa1268650:CDS
TGCATGCAGTGCAGAATGAG+CGG 0.681971 8_3:+1722741 Msa1268650:CDS
ACGATTATACAACGATGCAA+CGG 0.685114 8_3:-1723289 None:intergenic
CTTCTAGCTGAGACTGACTG+TGG 0.687790 8_3:+1723356 Msa1268650:three_prime_UTR
GTAGGTTGATGGACTGCAGG+AGG 0.689904 8_3:+1722699 Msa1268650:CDS
GCACTAAAACTATCAAGTGG+AGG 0.693236 8_3:+1722989 Msa1268650:CDS
GATCACGTGCAATCTCAGCA+AGG 0.693796 8_3:-1722424 None:intergenic
TAGCTATGGACTCAATACAA+TGG 0.696715 8_3:-1721734 None:intergenic
TGATGCGGAGGATAGGCCAG+AGG 0.699869 8_3:+1722192 Msa1268650:CDS
AACAGCAACAACAATGACGG+TGG 0.701652 8_3:+1723031 Msa1268650:CDS
GTGGCTGTCATCAAAAGATG+AGG 0.704835 8_3:+1718343 Msa1268650:five_prime_UTR
TCAACAACATCATCATCAGG+AGG 0.705468 8_3:+1722815 Msa1268650:CDS
CACATCCACGACATTCCTGG+AGG 0.714031 8_3:+1721459 Msa1268650:CDS
GTGTCAGATAGAACTAGTGG+GGG 0.721905 8_3:+1719125 Msa1268650:five_prime_UTR
TTCGATGGATCCATCCAAGG+TGG 0.725031 8_3:+1721764 Msa1268650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTACAAAATAAAGTTTAA+CGG + chr8_3:1720060-1720079 Msa1268650:intron 10.0%
!! ACATATTAAATACAAAATTA+AGG - chr8_3:1720997-1721016 None:intergenic 10.0%
!!! AAAATTTAAAATAAGAGGAT+CGG - chr8_3:1720654-1720673 None:intergenic 15.0%
!! TATTAAATACAAAATTAAGG+CGG - chr8_3:1720994-1721013 None:intergenic 15.0%
!!! TGATATTTTATGTTTTCTTT+TGG + chr8_3:1721076-1721095 Msa1268650:intron 15.0%
!! TTGTATACAATAATTACAAA+AGG - chr8_3:1721267-1721286 None:intergenic 15.0%
!! CATAAACATAAACATAAACA+AGG - chr8_3:1718433-1718452 None:intergenic 20.0%
!! TGAAACATAAAAATCAACAT+GGG - chr8_3:1718654-1718673 None:intergenic 20.0%
!! ATGAAACATAAAAATCAACA+TGG - chr8_3:1718655-1718674 None:intergenic 20.0%
!!! AAGCATTTTTTTTAATCCAA+TGG + chr8_3:1718792-1718811 Msa1268650:intron 20.0%
!!! AAAATTATGTTTCTGAATCT+TGG - chr8_3:1719086-1719105 None:intergenic 20.0%
!!! AACATAATTTTAATAGAGAG+TGG + chr8_3:1719095-1719114 Msa1268650:five_prime_UTR 20.0%
!!! ACATAATTTTAATAGAGAGT+GGG + chr8_3:1719096-1719115 Msa1268650:five_prime_UTR 20.0%
!!! TTTGAATCATATGTTATTTC+AGG + chr8_3:1719658-1719677 Msa1268650:intron 20.0%
!!! TTAGTATTATTTTGTCATGA+TGG + chr8_3:1719782-1719801 Msa1268650:intron 20.0%
!!! TTAAGTTGTTTATTGAAACA+GGG - chr8_3:1719992-1720011 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTGAAAC+AGG - chr8_3:1719993-1720012 None:intergenic 20.0%
!! TTATACATAAGCACTTATAT+TGG - chr8_3:1720025-1720044 None:intergenic 20.0%
!! TCAAATAATCAAATCTAAAC+AGG + chr8_3:1720184-1720203 Msa1268650:intron 20.0%
!! ATCTATAGTGAAAAAATTCT+TGG - chr8_3:1720575-1720594 None:intergenic 20.0%
!!! GTGTGAAAATTTAAAATAAG+AGG - chr8_3:1720659-1720678 None:intergenic 20.0%
!!! ATTTCATTCACTGTTTTTTA+CGG + chr8_3:1720773-1720792 Msa1268650:intron 20.0%
!! ATTAAATACAAAATTAAGGC+GGG - chr8_3:1720993-1721012 None:intergenic 20.0%
!!! CGTAAAATTTTATCTACATA+AGG + chr8_3:1721196-1721215 Msa1268650:CDS 20.0%
!! CACAAAGAATAGATTATTAT+TGG + chr8_3:1722055-1722074 Msa1268650:CDS 20.0%
!! AAACATGTTAAATACATGTA+TGG - chr8_3:1722568-1722587 None:intergenic 20.0%
!! CTGTTTAAAAACTAGTTATT+AGG + chr8_3:1723779-1723798 Msa1268650:three_prime_UTR 20.0%
! TTGATATCAAAGAAACACAA+AGG - chr8_3:1718511-1718530 None:intergenic 25.0%
!! AAACAATATCTGTGTTTTCT+AGG + chr8_3:1718542-1718561 Msa1268650:five_prime_UTR 25.0%
! ATGCTTTATGTCTACAAAAT+AGG + chr8_3:1718859-1718878 Msa1268650:intron 25.0%
!!! AAACAAAAGACAGCATTTTT+TGG - chr8_3:1718903-1718922 None:intergenic 25.0%
!!! CATAATTTTAATAGAGAGTG+GGG + chr8_3:1719097-1719116 Msa1268650:five_prime_UTR 25.0%
! AGATCAAAGTAGAAGATAAA+AGG - chr8_3:1719448-1719467 None:intergenic 25.0%
!! TTTTCTGTTTTATCCAAACT+TGG + chr8_3:1719487-1719506 Msa1268650:five_prime_UTR 25.0%
!!! TTTTGGAGCTTTTTTCTTTT+TGG + chr8_3:1719545-1719564 Msa1268650:five_prime_UTR 25.0%
! AAGATGAAGTTTATGAAACT+TGG + chr8_3:1719570-1719589 Msa1268650:exon 25.0%
!! AAAATGATGGAGATAATGTT+AGG + chr8_3:1719613-1719632 Msa1268650:CDS 25.0%
! GGAAATAAGAAAACAACTTA+TGG + chr8_3:1720133-1720152 Msa1268650:intron 25.0%
! AAGAAGATATATCTGAACTA+TGG - chr8_3:1720281-1720300 None:intergenic 25.0%
! GATAAATCTGAAAAGAAAGA+TGG - chr8_3:1720532-1720551 None:intergenic 25.0%
!! GGAAAGGAAAATTATTTTCA+AGG - chr8_3:1720554-1720573 None:intergenic 25.0%
! TAGTGAAAAAATTCTTGGAA+AGG - chr8_3:1720570-1720589 None:intergenic 25.0%
! ATTGTTCGTAAATATGCAAA+AGG - chr8_3:1720886-1720905 None:intergenic 25.0%
! CATTCAAAATTAATGTGAAG+TGG + chr8_3:1721110-1721129 Msa1268650:intron 25.0%
!! ATTACAAAAGGTGTATTCTT+TGG - chr8_3:1721255-1721274 None:intergenic 25.0%
! TTATTATTGGAGACTATTGT+CGG + chr8_3:1722068-1722087 Msa1268650:CDS 25.0%
! AACCTTTAAATACATGTCAA+TGG - chr8_3:1722534-1722553 None:intergenic 25.0%
! TGATTATAGTACAACAAAAC+CGG - chr8_3:1723464-1723483 None:intergenic 25.0%
!!! TAACTAATTTTGACCTATGA+TGG + chr8_3:1723691-1723710 Msa1268650:three_prime_UTR 25.0%
!!! TCTATTTTTACAACCATCAT+AGG - chr8_3:1723707-1723726 None:intergenic 25.0%
! ATTGTTGCAATTTATTTGCA+GGG + chr8_3:1723728-1723747 Msa1268650:three_prime_UTR 25.0%
AAAGGGAAAAAGGAAAAGTT+AGG + chr8_3:1718208-1718227 Msa1268650:five_prime_UTR 30.0%
AAGGGAAAAAGGAAAAGTTA+GGG + chr8_3:1718209-1718228 Msa1268650:five_prime_UTR 30.0%
AAACTACATGAACCAATCAA+AGG - chr8_3:1718407-1718426 None:intergenic 30.0%
AAGAAACACAAAGGTTTAGT+TGG - chr8_3:1718502-1718521 None:intergenic 30.0%
!! CAGATATTGTTTCAGGTTTA+TGG - chr8_3:1718534-1718553 None:intergenic 30.0%
GAAAACACAGATATTGTTTC+AGG - chr8_3:1718541-1718560 None:intergenic 30.0%
! TCACAAGTTGGAATAATGAT+GGG - chr8_3:1718701-1718720 None:intergenic 30.0%
!!! ACATAAAGCATCGTTTTTTG+TGG - chr8_3:1718850-1718869 None:intergenic 30.0%
CTTTATGTCTACAAAATAGG+TGG + chr8_3:1718862-1718881 Msa1268650:intron 30.0%
!!! AAATGCTGTCTTTTGTTTTC+AGG + chr8_3:1718905-1718924 Msa1268650:intron 30.0%
TGAATGTTGAGTATGGAATT+TGG + chr8_3:1718964-1718983 Msa1268650:five_prime_UTR 30.0%
!!! GTGTTTTGTTTGTTACTTTG+TGG + chr8_3:1719020-1719039 Msa1268650:five_prime_UTR 30.0%
!! TTTGTTGTTGTTTCCAACAA+TGG - chr8_3:1719055-1719074 None:intergenic 30.0%
!!! TTGGAGATAGTTTGTTTTGT+TGG + chr8_3:1719219-1719238 Msa1268650:five_prime_UTR 30.0%
! GAACATGTTGCTTACTAAAA+TGG - chr8_3:1719295-1719314 None:intergenic 30.0%
! AAATTTCATCTAACTAGCCT+TGG + chr8_3:1719376-1719395 Msa1268650:five_prime_UTR 30.0%
! GGTGATTTGAAAAGCTATTT+TGG + chr8_3:1719528-1719547 Msa1268650:five_prime_UTR 30.0%
!! CCATCATTTTGAAAAGAATC+AGG - chr8_3:1719603-1719622 None:intergenic 30.0%
! CCTGATTCTTTTCAAAATGA+TGG + chr8_3:1719600-1719619 Msa1268650:CDS 30.0%
AACATATGATTCAAAGCAAG+AGG - chr8_3:1719653-1719672 None:intergenic 30.0%
AAACATAAGAAACCAACCAA+TGG - chr8_3:1719724-1719743 None:intergenic 30.0%
TATATGCTGAGGAACTAATT+AGG - chr8_3:1719873-1719892 None:intergenic 30.0%
TAGCATTATCATATATGCTG+AGG - chr8_3:1719884-1719903 None:intergenic 30.0%
ACATAAGCACTTATATTGGA+AGG - chr8_3:1720021-1720040 None:intergenic 30.0%
ATTACGTAATCCTCAATTTG+AGG - chr8_3:1720211-1720230 None:intergenic 30.0%
TATCCTTGACTGATAAAGAA+TGG - chr8_3:1720246-1720265 None:intergenic 30.0%
TATATCTGAACTATGGAGAT+GGG - chr8_3:1720274-1720293 None:intergenic 30.0%
ATATATCTGAACTATGGAGA+TGG - chr8_3:1720275-1720294 None:intergenic 30.0%
GTGAGATAGAAATGTATCAT+TGG - chr8_3:1720311-1720330 None:intergenic 30.0%
! TGTTAACTTTTGCTTCTTTC+TGG - chr8_3:1720385-1720404 None:intergenic 30.0%
! TTTAAATTTTCACACGACAG+TGG + chr8_3:1720664-1720683 Msa1268650:intron 30.0%
GTATGCTTTCATGTAAGATT+TGG + chr8_3:1720688-1720707 Msa1268650:intron 30.0%
TAGTACATAACACACATTGA+TGG - chr8_3:1720745-1720764 None:intergenic 30.0%
! ACAAGCAATAGTATGTTTTC+TGG - chr8_3:1721025-1721044 None:intergenic 30.0%
CATATATTTGTTCAGGTATG+TGG + chr8_3:1721133-1721152 Msa1268650:intron 30.0%
TCTGACATAGTTGTTAATGT+TGG + chr8_3:1721170-1721189 Msa1268650:CDS 30.0%
CTGACATAGTTGTTAATGTT+GGG + chr8_3:1721171-1721190 Msa1268650:CDS 30.0%
TGACATAGTTGTTAATGTTG+GGG + chr8_3:1721172-1721191 Msa1268650:CDS 30.0%
ATGTGGTTTGATTATCCTTT+AGG + chr8_3:1721325-1721344 Msa1268650:intron 30.0%
ATATGTGCAAAGTTCTGTTA+TGG + chr8_3:1721498-1721517 Msa1268650:CDS 30.0%
AAGTATTTGATACCATCTTG+GGG - chr8_3:1722367-1722386 None:intergenic 30.0%
! GAAGTATTTGATACCATCTT+GGG - chr8_3:1722368-1722387 None:intergenic 30.0%
AAATACTTCGAGCAAGATAA+AGG + chr8_3:1722379-1722398 Msa1268650:CDS 30.0%
TGCCATTGACATGTATTTAA+AGG + chr8_3:1722529-1722548 Msa1268650:CDS 30.0%
CATGTTAAATACATGTATGG+TGG - chr8_3:1722565-1722584 None:intergenic 30.0%
! GAAAAGAATATGTAGGTTGA+TGG + chr8_3:1722688-1722707 Msa1268650:CDS 30.0%
!! AAGACGTAAAAGTTCTGAAA+GGG + chr8_3:1722957-1722976 Msa1268650:CDS 30.0%
AGAATAACTTCTTGGACATA+AGG - chr8_3:1723105-1723124 None:intergenic 30.0%
AAGCTTAGAGAATAACTTCT+TGG - chr8_3:1723113-1723132 None:intergenic 30.0%
AGAAGTTATTCTCTAAGCTT+TGG + chr8_3:1723113-1723132 Msa1268650:CDS 30.0%
GATTATAGTACAACAAAACC+GGG - chr8_3:1723463-1723482 None:intergenic 30.0%
TGTTGTACTATAATCAGAGA+AGG + chr8_3:1723468-1723487 Msa1268650:three_prime_UTR 30.0%
ACTAACTAGAATCAAATGCT+AGG + chr8_3:1723587-1723606 Msa1268650:three_prime_UTR 30.0%
AAACCAATACAAACTACACT+AGG - chr8_3:1723621-1723640 None:intergenic 30.0%
CATTGTTGCAATTTATTTGC+AGG + chr8_3:1723727-1723746 Msa1268650:three_prime_UTR 30.0%
AGGGAAAAAGGAAAAGTTAG+GGG + chr8_3:1718210-1718229 Msa1268650:five_prime_UTR 35.0%
! CATAAGTTGAGAGAGAAAGT+GGG + chr8_3:1718273-1718292 Msa1268650:five_prime_UTR 35.0%
!! AAGTGGGAACATTCTGAAAT+TGG + chr8_3:1718289-1718308 Msa1268650:five_prime_UTR 35.0%
CAAAAGATGAGGCTTGAAAA+AGG - chr8_3:1718379-1718398 None:intergenic 35.0%
! TCTTTTGCCATTCCTTTGAT+TGG + chr8_3:1718392-1718411 Msa1268650:five_prime_UTR 35.0%
ACATGAACCAATCAAAGGAA+TGG - chr8_3:1718402-1718421 None:intergenic 35.0%
CGAGTATGAGAAAAAAGAAG+AGG - chr8_3:1718478-1718497 None:intergenic 35.0%
! GTCACAAGTTGGAATAATGA+TGG - chr8_3:1718702-1718721 None:intergenic 35.0%
TATTCCAACTTGTGACCAAT+TGG + chr8_3:1718706-1718725 Msa1268650:intron 35.0%
ATTCCAACTTGTGACCAATT+GGG + chr8_3:1718707-1718726 Msa1268650:intron 35.0%
!! TGTTTTCAGGAGTTCAAAGA+AGG + chr8_3:1718918-1718937 Msa1268650:intron 35.0%
!! GTTTTCAGGAGTTCAAAGAA+GGG + chr8_3:1718919-1718938 Msa1268650:intron 35.0%
TAGTGTGTGAATGTTGAGTA+TGG + chr8_3:1718957-1718976 Msa1268650:five_prime_UTR 35.0%
!! AATTTTAATAGAGAGTGGGG+CGG + chr8_3:1719100-1719119 Msa1268650:five_prime_UTR 35.0%
ATGAATGTGTTTGTGTGTGT+TGG + chr8_3:1719200-1719219 Msa1268650:five_prime_UTR 35.0%
TCTCCTAACATGGTTTATCT+TGG + chr8_3:1719247-1719266 Msa1268650:five_prime_UTR 35.0%
CACAAACTCTTAACCAAGTT+TGG - chr8_3:1719503-1719522 None:intergenic 35.0%
CAAACTTGGTTAAGAGTTTG+TGG + chr8_3:1719501-1719520 Msa1268650:five_prime_UTR 35.0%
TGATTTCCTTCCAAATCCAT+TGG + chr8_3:1719705-1719724 Msa1268650:intron 35.0%
! AAGAAACCAACCAATGGATT+TGG - chr8_3:1719718-1719737 None:intergenic 35.0%
GTTCCATTCTTTATCAGTCA+AGG + chr8_3:1720240-1720259 Msa1268650:intron 35.0%
!! AACTTTTGCTTCTTTCTGGT+TGG - chr8_3:1720381-1720400 None:intergenic 35.0%
GCAAAAGTTAACATTGTCAC+AGG + chr8_3:1720392-1720411 Msa1268650:intron 35.0%
AAGAAAGATGGAACACTATG+TGG - chr8_3:1720520-1720539 None:intergenic 35.0%
TCCAAAATCAATCTAGTTGG+TGG + chr8_3:1720797-1720816 Msa1268650:intron 35.0%
!! ACCACCAACTAGATTGATTT+TGG - chr8_3:1720801-1720820 None:intergenic 35.0%
CACAAAACCAAATATGGCTA+TGG - chr8_3:1720856-1720875 None:intergenic 35.0%
CAAATATGCGTTTCAGCAAT+TGG + chr8_3:1720939-1720958 Msa1268650:intron 35.0%
ATTGCTTGTCATACTGTAGT+AGG + chr8_3:1721036-1721055 Msa1268650:intron 35.0%
GAAGTGGCATATATTTGTTC+AGG + chr8_3:1721126-1721145 Msa1268650:intron 35.0%
AGCAGATATTGATCAGGTAA+AGG - chr8_3:1721363-1721382 None:intergenic 35.0%
! CGTAAACTTTTGGACAAAAG+TGG - chr8_3:1721393-1721412 None:intergenic 35.0%
! CTTTTGCAAGCGTAAACTTT+TGG - chr8_3:1721403-1721422 None:intergenic 35.0%
! GTTAGTTTCAAACACAGATG+AGG + chr8_3:1721422-1721441 Msa1268650:CDS 35.0%
GCACATATTTCAAAAGCAAC+AGG - chr8_3:1721486-1721505 None:intergenic 35.0%
TGCAAAGTTCTGTTATGGTA+TGG + chr8_3:1721503-1721522 Msa1268650:CDS 35.0%
ATGTACGAGACCATTGAAAA+GGG + chr8_3:1721585-1721604 Msa1268650:CDS 35.0%
! GATGAGATTTCCCTTTTCAA+TGG - chr8_3:1721598-1721617 None:intergenic 35.0%
TAGCTATGGACTCAATACAA+TGG - chr8_3:1721737-1721756 None:intergenic 35.0%
AGTGGTCATACACATATAAC+AGG + chr8_3:1721787-1721806 Msa1268650:CDS 35.0%
GAAACAACTAATGGTTCCAA+AGG + chr8_3:1721860-1721879 Msa1268650:CDS 35.0%
AACTAATGGTTCCAAAGGAT+TGG + chr8_3:1721865-1721884 Msa1268650:CDS 35.0%
! CATTGGTTGTAATAGTTGAC+AGG - chr8_3:1721938-1721957 None:intergenic 35.0%
CTGTCAACTATTACAACCAA+TGG + chr8_3:1721936-1721955 Msa1268650:CDS 35.0%
ACAACCAATGGAAATGTTTC+CGG + chr8_3:1721948-1721967 Msa1268650:CDS 35.0%
ATAACACCCTTATTGAAACC+AGG - chr8_3:1722020-1722039 None:intergenic 35.0%
ATTGAAAGTGGCTATTCAAC+TGG + chr8_3:1722142-1722161 Msa1268650:CDS 35.0%
! CGAAGTATTTGATACCATCT+TGG - chr8_3:1722369-1722388 None:intergenic 35.0%
ATGTTCACAAAACTGAGAAG+AGG - chr8_3:1722458-1722477 None:intergenic 35.0%
AGGAAAGCTTGATACCAAAT+CGG - chr8_3:1722483-1722502 None:intergenic 35.0%
ACTTCAACCGAACTGAATTT+CGG + chr8_3:1722611-1722630 Msa1268650:intron 35.0%
CTCACACTATTATGTTATGC+AGG + chr8_3:1722637-1722656 Msa1268650:intron 35.0%
GTGAGAGGAAAAGAATATGT+AGG + chr8_3:1722681-1722700 Msa1268650:CDS 35.0%
!! GAAGACGTAAAAGTTCTGAA+AGG + chr8_3:1722956-1722975 Msa1268650:CDS 35.0%
!! AGACGTAAAAGTTCTGAAAG+GGG + chr8_3:1722958-1722977 Msa1268650:CDS 35.0%
!!! TCCACTTGATAGTTTTAGTG+CGG - chr8_3:1722990-1723009 None:intergenic 35.0%
AGAAACAGCAACAACAATGA+CGG + chr8_3:1723028-1723047 Msa1268650:CDS 35.0%
GTAGCTGCTAACAAAATGAA+AGG + chr8_3:1723076-1723095 Msa1268650:CDS 35.0%
TGGTCGAGCAAAGAAAAAAA+CGG + chr8_3:1723133-1723152 Msa1268650:CDS 35.0%
ACGATTATACAACGATGCAA+CGG - chr8_3:1723292-1723311 None:intergenic 35.0%
TGTATAATCGTCGATCACTT+TGG + chr8_3:1723301-1723320 Msa1268650:three_prime_UTR 35.0%
! TTGCCTAGTGTAGTTTGTAT+TGG + chr8_3:1723615-1723634 Msa1268650:three_prime_UTR 35.0%
!! TTGTACACCACTGTTTTGTT+AGG + chr8_3:1723654-1723673 Msa1268650:three_prime_UTR 35.0%
GGGAAAAAGGAAAAGTTAGG+GGG + chr8_3:1718211-1718230 Msa1268650:five_prime_UTR 40.0%
AAAAAGGAAAAGTTAGGGGG+TGG + chr8_3:1718214-1718233 Msa1268650:five_prime_UTR 40.0%
CCACTTTCTCTCTCAACTTA+TGG - chr8_3:1718275-1718294 None:intergenic 40.0%
! CCATAAGTTGAGAGAGAAAG+TGG + chr8_3:1718272-1718291 Msa1268650:five_prime_UTR 40.0%
!! GGGAACATTCTGAAATTGGT+TGG + chr8_3:1718293-1718312 Msa1268650:five_prime_UTR 40.0%
CAAAGGAATGGCAAAAGATG+AGG - chr8_3:1718390-1718409 None:intergenic 40.0%
TGCATTGAAACCAACCCAAT+TGG - chr8_3:1718724-1718743 None:intergenic 40.0%
GACACGTTATACACTACCAT+TGG - chr8_3:1718811-1718830 None:intergenic 40.0%
CAAAACACACACACACTTTC+TGG - chr8_3:1719008-1719027 None:intergenic 40.0%
GTGGTGTCTAAATCCATTGT+TGG + chr8_3:1719039-1719058 Msa1268650:five_prime_UTR 40.0%
! TGGTGTCAGATAGAACTAGT+GGG + chr8_3:1719123-1719142 Msa1268650:five_prime_UTR 40.0%
!! GTTGGTAATGTCTCCTAACA+TGG + chr8_3:1719237-1719256 Msa1268650:five_prime_UTR 40.0%
CTAACATGGTTTATCTTGGC+CGG + chr8_3:1719251-1719270 Msa1268650:five_prime_UTR 40.0%
GTAACAAAGTCCAAAGAGAC+CGG - chr8_3:1719273-1719292 None:intergenic 40.0%
!! ATCTAACTAGCCTTGGTTTG+TGG + chr8_3:1719383-1719402 Msa1268650:five_prime_UTR 40.0%
!! TCTAACTAGCCTTGGTTTGT+GGG + chr8_3:1719384-1719403 Msa1268650:five_prime_UTR 40.0%
!! CTTGGTTTGTGGGAAAGATT+CGG + chr8_3:1719394-1719413 Msa1268650:five_prime_UTR 40.0%
TGGTTAAGAGTTTGTGGAGT+AGG + chr8_3:1719507-1719526 Msa1268650:five_prime_UTR 40.0%
TTCCTTCCAAATCCATTGGT+TGG + chr8_3:1719709-1719728 Msa1268650:intron 40.0%
! AACCAACCAATGGATTTGGA+AGG - chr8_3:1719714-1719733 None:intergenic 40.0%
ACTGCTTTCATAAGCAATCC+TGG + chr8_3:1720101-1720120 Msa1268650:intron 40.0%
CTAAACAGGTCCTCAAATTG+AGG + chr8_3:1720198-1720217 Msa1268650:intron 40.0%
TGTTGGAGTTAAGGGAGAAT+AGG - chr8_3:1720336-1720355 None:intergenic 40.0%
GAAGCTCTTGTTGGAGTTAA+GGG - chr8_3:1720344-1720363 None:intergenic 40.0%
AGTTGCATCTCTGACAAGTT+CGG + chr8_3:1720419-1720438 Msa1268650:intron 40.0%
TGTAGATGCTGAGTTACAGT+TGG + chr8_3:1720486-1720505 Msa1268650:intron 40.0%
GGCTCCAAAATCAATCTAGT+TGG + chr8_3:1720794-1720813 Msa1268650:intron 40.0%
!! ACACTCTGAAGTTTGGTTCA+GGG - chr8_3:1720831-1720850 None:intergenic 40.0%
!! TATGGTCACACTCTGAAGTT+TGG - chr8_3:1720838-1720857 None:intergenic 40.0%
AGTGTGACCATAGCCATATT+TGG + chr8_3:1720846-1720865 Msa1268650:intron 40.0%
GCAGGACACAAAACCAAATA+TGG - chr8_3:1720862-1720881 None:intergenic 40.0%
! CGTAAATATGCAAAAGGTGC+AGG - chr8_3:1720880-1720899 None:intergenic 40.0%
GCTCGCTACATAAGTTTATG+TGG + chr8_3:1721308-1721327 Msa1268650:intron 40.0%
AGGTTCAATAAGCAGCCTAA+AGG - chr8_3:1721343-1721362 None:intergenic 40.0%
AACTGCAGCAGATATTGATC+AGG - chr8_3:1721369-1721388 None:intergenic 40.0%
GATGTACGAGACCATTGAAA+AGG + chr8_3:1721584-1721603 Msa1268650:CDS 40.0%
CAACCAAATCACTTCTTCCA+TGG + chr8_3:1721688-1721707 Msa1268650:CDS 40.0%
CAAATCACTTCTTCCATGGT+CGG + chr8_3:1721692-1721711 Msa1268650:CDS 40.0%
TATTGAGTCCATAGCTACCA+AGG + chr8_3:1721740-1721759 Msa1268650:CDS 40.0%
TAACAGGAAAAAGCTCCCAT+CGG + chr8_3:1721803-1721822 Msa1268650:CDS 40.0%
AAAAAGCTCCCATCGGAAAA+TGG + chr8_3:1721810-1721829 Msa1268650:CDS 40.0%
AAAAGCTCCCATCGGAAAAT+GGG + chr8_3:1721811-1721830 Msa1268650:CDS 40.0%
TAATGGTTCCAAAGGATTGG+TGG + chr8_3:1721868-1721887 Msa1268650:CDS 40.0%
! AATGGTTCCAAAGGATTGGT+GGG + chr8_3:1721869-1721888 Msa1268650:CDS 40.0%
CTCGCTTATAGAGATCAAGT+TGG - chr8_3:1721914-1721933 None:intergenic 40.0%
CAACCAATGGAAATGTTTCC+GGG + chr8_3:1721949-1721968 Msa1268650:CDS 40.0%
AACCAATGGAAATGTTTCCG+GGG + chr8_3:1721950-1721969 Msa1268650:CDS 40.0%
AAGGTTGCCTGGTTTCAATA+AGG + chr8_3:1722010-1722029 Msa1268650:CDS 40.0%
AGGTTGCCTGGTTTCAATAA+GGG + chr8_3:1722011-1722030 Msa1268650:CDS 40.0%
!! AATAAGGGTGTTATCCAGAG+TGG + chr8_3:1722026-1722045 Msa1268650:CDS 40.0%
TCTTTGTGATATCACCACTC+TGG - chr8_3:1722043-1722062 None:intergenic 40.0%
!! GACTATTGTCGGTTTATTGC+CGG + chr8_3:1722079-1722098 Msa1268650:CDS 40.0%
GGTTTATTGCCGGTAGATAT+GGG + chr8_3:1722089-1722108 Msa1268650:CDS 40.0%
CTCGCTGAAGTTATTGAAAG+TGG + chr8_3:1722130-1722149 Msa1268650:CDS 40.0%
TCAACTGGATTGTGAAGTGT+CGG + chr8_3:1722157-1722176 Msa1268650:CDS 40.0%
AAACTGAGAAGAGGCAGATT+AGG - chr8_3:1722449-1722468 None:intergenic 40.0%
!! TTTTGTGAACATCGCCGATT+TGG + chr8_3:1722466-1722485 Msa1268650:CDS 40.0%
TTTCCTAGACAGTCTCATGA+CGG + chr8_3:1722497-1722516 Msa1268650:CDS 40.0%
TTCAGTTCGGTTGAAGTCAT+TGG - chr8_3:1722608-1722627 None:intergenic 40.0%
TGAGTCTCCGAAATTCAGTT+CGG - chr8_3:1722621-1722640 None:intergenic 40.0%
TATGTTATGCAGGAACATCC+TGG + chr8_3:1722647-1722666 Msa1268650:intron 40.0%
GCTTCAACAACATCATCATC+AGG + chr8_3:1722812-1722831 Msa1268650:CDS 40.0%
TCAACAACATCATCATCAGG+AGG + chr8_3:1722815-1722834 Msa1268650:CDS 40.0%
GCACTAAAACTATCAAGTGG+AGG + chr8_3:1722989-1723008 Msa1268650:CDS 40.0%
AATCTACGCCATCTAGAAGT+AGG + chr8_3:1723215-1723234 Msa1268650:CDS 40.0%
GAATGTCTCCTACTTCTAGA+TGG - chr8_3:1723226-1723245 None:intergenic 40.0%
! TCGATCACTTTGGTAGCATT+AGG + chr8_3:1723311-1723330 Msa1268650:three_prime_UTR 40.0%
TGAGGTATGATGGTTGTTTG+TGG + chr8_3:1723381-1723400 Msa1268650:three_prime_UTR 40.0%
CACTTAAGATGAGCCTATGA+GGG + chr8_3:1723436-1723455 Msa1268650:three_prime_UTR 40.0%
CGCTTAACCTAACAAAACAG+TGG - chr8_3:1723664-1723683 None:intergenic 40.0%
TGTGTTTGTGTAGCTAGCTG+TGG + chr8_3:1718321-1718340 Msa1268650:five_prime_UTR 45.0%
GTGGCTGTCATCAAAAGATG+AGG + chr8_3:1718343-1718362 Msa1268650:five_prime_UTR 45.0%
CAACCCAATTGGTCACAAGT+TGG - chr8_3:1718713-1718732 None:intergenic 45.0%
CAACTTGTGACCAATTGGGT+TGG + chr8_3:1718711-1718730 Msa1268650:intron 45.0%
AGGAGTTCAAAGAAGGGACA+TGG + chr8_3:1718925-1718944 Msa1268650:intron 45.0%
! GTGGTGTCAGATAGAACTAG+TGG + chr8_3:1719122-1719141 Msa1268650:five_prime_UTR 45.0%
GGTGTCAGATAGAACTAGTG+GGG + chr8_3:1719124-1719143 Msa1268650:five_prime_UTR 45.0%
GTGTCAGATAGAACTAGTGG+GGG + chr8_3:1719125-1719144 Msa1268650:five_prime_UTR 45.0%
CGGCCAAGATAAACCATGTT+AGG - chr8_3:1719253-1719272 None:intergenic 45.0%
TTTATCTTGGCCGGTCTCTT+TGG + chr8_3:1719260-1719279 Msa1268650:five_prime_UTR 45.0%
CGAATCTTTCCCACAAACCA+AGG - chr8_3:1719396-1719415 None:intergenic 45.0%
! GGGAAAGATTCGGTCATACA+AGG + chr8_3:1719404-1719423 Msa1268650:five_prime_UTR 45.0%
CTTATTTCCAGAAGCTCTCC+AGG - chr8_3:1720122-1720141 None:intergenic 45.0%
GGAAGCTCTTGTTGGAGTTA+AGG - chr8_3:1720345-1720364 None:intergenic 45.0%
AGTGAGATGGAAGCTCTTGT+TGG - chr8_3:1720353-1720372 None:intergenic 45.0%
ACAAGAGCTTCCATCTCACT+AGG + chr8_3:1720353-1720372 Msa1268650:intron 45.0%
CAAGAGCTTCCATCTCACTA+GGG + chr8_3:1720354-1720373 Msa1268650:intron 45.0%
!! CACACTCTGAAGTTTGGTTC+AGG - chr8_3:1720832-1720851 None:intergenic 45.0%
ATTCACATCCACGACATTCC+TGG + chr8_3:1721456-1721475 Msa1268650:CDS 45.0%
! TCCTCAACTCCAGCATTTTC+AGG + chr8_3:1721634-1721653 Msa1268650:CDS 45.0%
TCCTGAAAATGCTGGAGTTG+AGG - chr8_3:1721638-1721657 None:intergenic 45.0%
TTTCCAGCTCCTGAAAATGC+TGG - chr8_3:1721646-1721665 None:intergenic 45.0%
CGACCATGGAAGAAGTGATT+TGG - chr8_3:1721694-1721713 None:intergenic 45.0%
ATCTTAAGTTCCTCCGACCA+TGG - chr8_3:1721708-1721727 None:intergenic 45.0%
! CTTCGTTCCCATTTTCCGAT+GGG - chr8_3:1721821-1721840 None:intergenic 45.0%
AAAATGGGAACGAAGCACAC+TGG + chr8_3:1721826-1721845 Msa1268650:CDS 45.0%
CGGTGTGAGGAAACAACTAA+TGG + chr8_3:1721851-1721870 Msa1268650:CDS 45.0%
TAAGTGCGTACACCTCTAGA+AGG + chr8_3:1721991-1722010 Msa1268650:CDS 45.0%
CGGTTTATTGCCGGTAGATA+TGG + chr8_3:1722088-1722107 Msa1268650:CDS 45.0%
!!! CTTTTGATTTGTGCGTCAGC+TGG + chr8_3:1722239-1722258 Msa1268650:CDS 45.0%
ACACGAGCATCAATCTTCGA+TGG + chr8_3:1722316-1722335 Msa1268650:CDS 45.0%
TTCGATGGAAGACGAATTGC+AGG + chr8_3:1722331-1722350 Msa1268650:CDS 45.0%
!!! CTCTCACTTTTGCTGATTCC+AGG - chr8_3:1722668-1722687 None:intergenic 45.0%
CTGGAATCAGCAAAAGTGAG+AGG + chr8_3:1722666-1722685 Msa1268650:CDS 45.0%
!! TATGTAGGTTGATGGACTGC+AGG + chr8_3:1722696-1722715 Msa1268650:CDS 45.0%
! TCCTTTACGTGTCGTTGTAC+AGG + chr8_3:1722766-1722785 Msa1268650:CDS 45.0%
ACCTGTACAACGACACGTAA+AGG - chr8_3:1722770-1722789 None:intergenic 45.0%
GACCAACACAGAAGAGGAAT+GGG + chr8_3:1722916-1722935 Msa1268650:CDS 45.0%
ATCCCATTCCTCTTCTGTGT+TGG - chr8_3:1722921-1722940 None:intergenic 45.0%
GCCGCACTAAAACTATCAAG+TGG + chr8_3:1722986-1723005 Msa1268650:CDS 45.0%
!! TGCTGTTTCTGTCACTACTC+TGG - chr8_3:1723018-1723037 None:intergenic 45.0%
AACAGCAACAACAATGACGG+TGG + chr8_3:1723031-1723050 Msa1268650:CDS 45.0%
! AACAATGACGGTGGTGGTAT+AGG + chr8_3:1723040-1723059 Msa1268650:CDS 45.0%
AACAGTAGAAGCAGGGCTTT+CGG - chr8_3:1723182-1723201 None:intergenic 45.0%
CCTCATAGGCTCATCTTAAG+TGG - chr8_3:1723438-1723457 None:intergenic 45.0%
CCACTTAAGATGAGCCTATG+AGG + chr8_3:1723435-1723454 Msa1268650:three_prime_UTR 45.0%
AAGGAAAAGTTAGGGGGTGG+TGG + chr8_3:1718217-1718236 Msa1268650:five_prime_UTR 50.0%
AGGAAAAGTTAGGGGGTGGT+GGG + chr8_3:1718218-1718237 Msa1268650:five_prime_UTR 50.0%
GTTTGTGTAGCTAGCTGTGG+TGG + chr8_3:1718324-1718343 Msa1268650:five_prime_UTR 50.0%
TTTAATAGAGAGTGGGGCGG+TGG + chr8_3:1719103-1719122 Msa1268650:five_prime_UTR 50.0%
AAGCAATCCTGGAGAGCTTC+TGG + chr8_3:1720112-1720131 Msa1268650:intron 50.0%
TCAAAAGCAACAGGTCCTCC+AGG - chr8_3:1721477-1721496 None:intergenic 50.0%
!! ACTCCAGCATTTTCAGGAGC+TGG + chr8_3:1721640-1721659 Msa1268650:CDS 50.0%
ATCACTTCTTCCATGGTCGG+AGG + chr8_3:1721695-1721714 Msa1268650:CDS 50.0%
! CATCGAAGCCTTGGTAGCTA+TGG - chr8_3:1721751-1721770 None:intergenic 50.0%
CATAGCTACCAAGGCTTCGA+TGG + chr8_3:1721749-1721768 Msa1268650:CDS 50.0%
TTCGATGGATCCATCCAAGG+TGG + chr8_3:1721764-1721783 Msa1268650:CDS 50.0%
TATGACCACTCCACCTTGGA+TGG - chr8_3:1721777-1721796 None:intergenic 50.0%
TGTGTATGACCACTCCACCT+TGG - chr8_3:1721781-1721800 None:intergenic 50.0%
! GCTTCGTTCCCATTTTCCGA+TGG - chr8_3:1721822-1721841 None:intergenic 50.0%
TCTTCCACCCACCAATCCTT+TGG - chr8_3:1721879-1721898 None:intergenic 50.0%
TGCCCCGGAAACATTTCCAT+TGG - chr8_3:1721955-1721974 None:intergenic 50.0%
AATGTTTCCGGGGCAGTTGT+CGG + chr8_3:1721960-1721979 Msa1268650:CDS 50.0%
! TACACCTCTAGAAGGTTGCC+TGG + chr8_3:1721999-1722018 Msa1268650:CDS 50.0%
GAAACCAGGCAACCTTCTAG+AGG - chr8_3:1722006-1722025 None:intergenic 50.0%
TTGCCGGTAGATATGGGAAG+TGG + chr8_3:1722095-1722114 Msa1268650:CDS 50.0%
GAGCCACTTCCCATATCTAC+CGG - chr8_3:1722101-1722120 None:intergenic 50.0%
GATATGGGAAGTGGCTCATG+CGG + chr8_3:1722104-1722123 Msa1268650:CDS 50.0%
GATCACGTGCAATCTCAGCA+AGG - chr8_3:1722427-1722446 None:intergenic 50.0%
AGACCGTCATGAGACTGTCT+AGG - chr8_3:1722503-1722522 None:intergenic 50.0%
TGCATGCAGTGCAGAATGAG+CGG + chr8_3:1722741-1722760 Msa1268650:CDS 50.0%
TGATCTTCCCGGTTCCATCA+GGG + chr8_3:1722850-1722869 Msa1268650:CDS 50.0%
ATGCAATGCCCTGATGGAAC+CGG - chr8_3:1722861-1722880 None:intergenic 50.0%
TGAACTACCGTGAGAACCAC+CGG - chr8_3:1722885-1722904 None:intergenic 50.0%
GTGGTTCTCACGGTAGTTCA+AGG + chr8_3:1722885-1722904 Msa1268650:CDS 50.0%
TACCACGACCAACACAGAAG+AGG + chr8_3:1722910-1722929 Msa1268650:CDS 50.0%
! TTCCTCTTCTGTGTTGGTCG+TGG - chr8_3:1722915-1722934 None:intergenic 50.0%
CGACCAACACAGAAGAGGAA+TGG + chr8_3:1722915-1722934 Msa1268650:CDS 50.0%
AGAAGAGGAATGGGATGCTG+TGG + chr8_3:1722925-1722944 Msa1268650:CDS 50.0%
AGCAACAACAATGACGGTGG+TGG + chr8_3:1723034-1723053 Msa1268650:CDS 50.0%
! CTTCTAGCTGAGACTGACTG+TGG + chr8_3:1723356-1723375 Msa1268650:three_prime_UTR 50.0%
GACTGTGGCTTGAGGTATGA+TGG + chr8_3:1723371-1723390 Msa1268650:three_prime_UTR 50.0%
AACAAAACCGGGTCCCTCAT+AGG - chr8_3:1723452-1723471 None:intergenic 50.0%
GGAAAAGTTAGGGGGTGGTG+GGG + chr8_3:1718219-1718238 Msa1268650:five_prime_UTR 55.0%
! GAAAAGTTAGGGGGTGGTGG+GGG + chr8_3:1718220-1718239 Msa1268650:five_prime_UTR 55.0%
CTGGTTGGACCCTAGTGAGA+TGG - chr8_3:1720366-1720385 None:intergenic 55.0%
CAGGTATGTGGCAACTGAGC+TGG + chr8_3:1721145-1721164 Msa1268650:intron 55.0%
CACATCCACGACATTCCTGG+AGG + chr8_3:1721459-1721478 Msa1268650:CDS 55.0%
GGATGGATCCATCGAAGCCT+TGG - chr8_3:1721760-1721779 None:intergenic 55.0%
GGCTTCGATGGATCCATCCA+AGG + chr8_3:1721761-1721780 Msa1268650:CDS 55.0%
TGGATCCATCCAAGGTGGAG+TGG + chr8_3:1721769-1721788 Msa1268650:CDS 55.0%
GGGAACGAAGCACACTGGAA+CGG + chr8_3:1721831-1721850 Msa1268650:CDS 55.0%
AAGCACACTGGAACGGTGTG+AGG + chr8_3:1721838-1721857 Msa1268650:CDS 55.0%
! GGTTCCAAAGGATTGGTGGG+TGG + chr8_3:1721872-1721891 Msa1268650:CDS 55.0%
CGGTGAGATCCGAACTGATG+CGG + chr8_3:1722177-1722196 Msa1268650:CDS 55.0%
TGAGATCCGAACTGATGCGG+AGG + chr8_3:1722180-1722199 Msa1268650:CDS 55.0%
TCCGAACTGATGCGGAGGAT+AGG + chr8_3:1722185-1722204 Msa1268650:CDS 55.0%
GCCTATCCTCCGCATCAGTT+CGG - chr8_3:1722189-1722208 None:intergenic 55.0%
GGAGATCAGAAGCCCCAAGA+TGG + chr8_3:1722352-1722371 Msa1268650:CDS 55.0%
!! GTAGGTTGATGGACTGCAGG+AGG + chr8_3:1722699-1722718 Msa1268650:CDS 55.0%
ACGAGCACTCCTGATCTTCC+CGG + chr8_3:1722839-1722858 Msa1268650:CDS 55.0%
CTGATGGAACCGGGAAGATC+AGG - chr8_3:1722851-1722870 None:intergenic 55.0%
CTGATCTTCCCGGTTCCATC+AGG + chr8_3:1722849-1722868 Msa1268650:CDS 55.0%
TGCAATGCCCTGATGGAACC+GGG - chr8_3:1722860-1722879 None:intergenic 55.0%
!! TCCATCAGGGCATTGCATCC+CGG + chr8_3:1722863-1722882 Msa1268650:CDS 55.0%
TTGCATCCCGGTGGTTCTCA+CGG + chr8_3:1722875-1722894 Msa1268650:CDS 55.0%
GAACTACCGTGAGAACCACC+GGG - chr8_3:1722884-1722903 None:intergenic 55.0%
GCTTTCGGACGTATCAGAGC+TGG - chr8_3:1723167-1723186 None:intergenic 55.0%
CTGAGACTGACTGTGGCTTG+AGG + chr8_3:1723363-1723382 Msa1268650:three_prime_UTR 55.0%
AGATGAGCCTATGAGGGACC+CGG + chr8_3:1723442-1723461 Msa1268650:three_prime_UTR 55.0%
CAGGTCCTCCAGGAATGTCG+TGG - chr8_3:1721467-1721486 None:intergenic 60.0%
AGTTGCAGCTCGCTGTGCAG+CGG + chr8_3:1721551-1721570 Msa1268650:CDS 60.0%
AGCTTCTCCGACAACTGCCC+CGG - chr8_3:1721970-1721989 None:intergenic 60.0%
TGATGCGGAGGATAGGCCAG+AGG + chr8_3:1722192-1722211 Msa1268650:CDS 60.0%
GAGGATAGGCCAGAGGCTTG+AGG + chr8_3:1722199-1722218 Msa1268650:CDS 60.0%
GATAGGCCAGAGGCTTGAGG+AGG + chr8_3:1722202-1722221 Msa1268650:CDS 60.0%
CCAGAGGCTTGAGGAGGCTA+CGG + chr8_3:1722208-1722227 Msa1268650:CDS 60.0%
ACCGGGATGCAATGCCCTGA+TGG - chr8_3:1722867-1722886 None:intergenic 60.0%
!! ATCAGGGCATTGCATCCCGG+TGG + chr8_3:1722866-1722885 Msa1268650:CDS 60.0%
CCGTAGCCTCCTCAAGCCTC+TGG - chr8_3:1722211-1722230 None:intergenic 65.0%
GAGGCTTGAGGAGGCTACGG+TGG + chr8_3:1722211-1722230 Msa1268650:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1718205 1723817 1718205 ID=Msa1268650;Name=Msa1268650
chr8_3 mRNA 1718205 1723817 1718205 ID=Msa1268650-mRNA-1;Parent=Msa1268650;Name=Msa1268650-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1005|1|1|1|0.75|0.6|5|562|630
chr8_3 exon 1718205 1718563 1718205 ID=Msa1268650-mRNA-1:exon:496;Parent=Msa1268650-mRNA-1
chr8_3 exon 1718927 1719634 1718927 ID=Msa1268650-mRNA-1:exon:497;Parent=Msa1268650-mRNA-1
chr8_3 exon 1721148 1721217 1721148 ID=Msa1268650-mRNA-1:exon:498;Parent=Msa1268650-mRNA-1
chr8_3 exon 1721387 1722550 1721387 ID=Msa1268650-mRNA-1:exon:499;Parent=Msa1268650-mRNA-1
chr8_3 exon 1722659 1723817 1722659 ID=Msa1268650-mRNA-1:exon:500;Parent=Msa1268650-mRNA-1
chr8_3 five_prime_UTR 1718205 1718563 1718205 ID=Msa1268650-mRNA-1:five_prime_utr;Parent=Msa1268650-mRNA-1
chr8_3 five_prime_UTR 1718927 1719572 1718927 ID=Msa1268650-mRNA-1:five_prime_utr;Parent=Msa1268650-mRNA-1
chr8_3 CDS 1719573 1719634 1719573 ID=Msa1268650-mRNA-1:cds;Parent=Msa1268650-mRNA-1
chr8_3 CDS 1721148 1721217 1721148 ID=Msa1268650-mRNA-1:cds;Parent=Msa1268650-mRNA-1
chr8_3 CDS 1721387 1722550 1721387 ID=Msa1268650-mRNA-1:cds;Parent=Msa1268650-mRNA-1
chr8_3 CDS 1722659 1723255 1722659 ID=Msa1268650-mRNA-1:cds;Parent=Msa1268650-mRNA-1
chr8_3 three_prime_UTR 1723256 1723817 1723256 ID=Msa1268650-mRNA-1:three_prime_utr;Parent=Msa1268650-mRNA-1
Gene Sequence

>Msa1268650

ATGAAGTTTATGAAACTTGGATCTAAGCCTGATTCTTTTCAAAATGATGGAGATAATGTTAGGTATGTGGCAACTGAGCTGGCATCTGACATAGTTGTTAATGTTGGGGACGTAAAATTTTATCTACATAAGTTTCCACTTTTGTCCAAAAGTTTACGCTTGCAAAAGTTAGTTTCAAACACAGATGAGGAGAATGACGAAATTCACATCCACGACATTCCTGGAGGACCTGTTGCTTTTGAAATATGTGCAAAGTTCTGTTATGGTATGGTTGTCACTCTAAATGCATACAATGTAGTTGCAGCTCGCTGTGCAGCGGAGTATCTTGAGATGTACGAGACCATTGAAAAGGGAAATCTCATCTACAAGATTGAAGTTTTCCTCAACTCCAGCATTTTCAGGAGCTGGAAAGATTCTATTATTGTTCTACAAACAACCAAATCACTTCTTCCATGGTCGGAGGAACTTAAGATCGTGAGCCATTGTATTGAGTCCATAGCTACCAAGGCTTCGATGGATCCATCCAAGGTGGAGTGGTCATACACATATAACAGGAAAAAGCTCCCATCGGAAAATGGGAACGAAGCACACTGGAACGGTGTGAGGAAACAACTAATGGTTCCAAAGGATTGGTGGGTGGAAGATCTTTGCGAGCTCCAACTTGATCTCTATAAGCGAGTCCTGTCAACTATTACAACCAATGGAAATGTTTCCGGGGCAGTTGTCGGAGAAGCTCTAAGTGCGTACACCTCTAGAAGGTTGCCTGGTTTCAATAAGGGTGTTATCCAGAGTGGTGATATCACAAAGAATAGATTATTATTGGAGACTATTGTCGGTTTATTGCCGGTAGATATGGGAAGTGGCTCATGCGGTTTCTCGCTGAAGTTATTGAAAGTGGCTATTCAACTGGATTGTGAAGTGTCGGTGAGATCCGAACTGATGCGGAGGATAGGCCAGAGGCTTGAGGAGGCTACGGTGGCTGATCTTTTGATTTGTGCGTCAGCTGGTGAAACAACTCACGATGTTGAAACTGTGCAGAAGCTAGTTGAAGTGTTTGTAGCACACGAGCATCAATCTTCGATGGAAGACGAATTGCAGGAGATCAGAAGCCCCAAGATGGTATCAAATACTTCGAGCAAGATAAAGGTTGCAAAGCTTGTCGATAGCTACCTTGCTGAGATTGCACGTGATCCTAATCTGCCTCTTCTCAGTTTTGTGAACATCGCCGATTTGGTATCAAGCTTTCCTAGACAGTCTCATGACGGTCTTTATCGTGCCATTGACATGTATTTAAAGGAACATCCTGGAATCAGCAAAAGTGAGAGGAAAAGAATATGTAGGTTGATGGACTGCAGGAGGCTATCTGCAGAAGCTTGCATGCATGCAGTGCAGAATGAGCGGCTTCCTTTACGTGTCGTTGTACAGGTTCTCTTCTTTGAGCAGATGAGAGCTTCAACAACATCATCATCAGGAGGCACGAGCACTCCTGATCTTCCCGGTTCCATCAGGGCATTGCATCCCGGTGGTTCTCACGGTAGTTCAAGGTCTACCACGACCAACACAGAAGAGGAATGGGATGCTGTGGCAACAGCAGAAGACGTAAAAGTTCTGAAAGGGGAACTCGCCGCACTAAAACTATCAAGTGGAGGTAGCCAGAGTAGTGACAGAAACAGCAACAACAATGACGGTGGTGGTATAGGCAATGCAGAAAAAGTAGCTGCTAACAAAATGAAAGGCTTCCTTATGTCCAAGAAGTTATTCTCTAAGCTTTGGTCGAGCAAAGAAAAAAACGGAGAGATTACCAGCTCTGATACGTCCGAAAGCCCTGCTTCTACTGTTGTTGAGGAGACAAAATCTACGCCATCTAGAAGTAGGAGACATTCAGTATCTTAA
Protein sequence

>Msa1268650

MKFMKLGSKPDSFQNDGDNVRYVATELASDIVVNVGDVKFYLHKFPLLSKSLRLQKLVSNTDEENDEIHIHDIPGGPVAFEICAKFCYGMVVTLNAYNVVAARCAAEYLEMYETIEKGNLIYKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEELKIVSHCIESIATKASMDPSKVEWSYTYNRKKLPSENGNEAHWNGVRKQLMVPKDWWVEDLCELQLDLYKRVLSTITTNGNVSGAVVGEALSAYTSRRLPGFNKGVIQSGDITKNRLLLETIVGLLPVDMGSGSCGFSLKLLKVAIQLDCEVSVRSELMRRIGQRLEEATVADLLICASAGETTHDVETVQKLVEVFVAHEHQSSMEDELQEIRSPKMVSNTSSKIKVAKLVDSYLAEIARDPNLPLLSFVNIADLVSSFPRQSHDGLYRAIDMYLKEHPGISKSERKRICRLMDCRRLSAEACMHAVQNERLPLRVVVQVLFFEQMRASTTSSSGGTSTPDLPGSIRALHPGGSHGSSRSTTTNTEEEWDAVATAEDVKVLKGELAALKLSSGGSQSSDRNSNNNDGGGIGNAEKVAANKMKGFLMSKKLFSKLWSSKEKNGEITSSDTSESPASTVVEETKSTPSRSRRHSVS*