Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269270 | sp|Q9FZ45|Y1686_ARATH | 74.741 | 483 | 108 | 5 | 1 | 478 | 1 | 474 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269270 | A0A072UHD8 | 99.582 | 478 | 2 | 0 | 1 | 478 | 1 | 478 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0672420 | Msa1269270 | 0.807293 | 5.425350e-50 | -8.615850e-47 |
| Msa1089870 | Msa1269270 | 0.968724 | 4.372187e-129 | -8.615850e-47 |
| Msa0945080 | Msa1269270 | 0.839822 | 1.259103e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269270 | MtrunA17_Chr4g0000411 | 99.582 | 478 | 2 | 0 | 1 | 478 | 1 | 478 | 0.0 | 974 |
| Msa1269270 | MtrunA17_Chr4g0002141 | 70.637 | 487 | 83 | 4 | 1 | 478 | 1 | 436 | 0.0 | 678 |
| Msa1269270 | MtrunA17_Chr2g0289421 | 49.068 | 483 | 186 | 10 | 1 | 478 | 1 | 428 | 2.02e-150 | 435 |
| Msa1269270 | MtrunA17_Chr4g0051481 | 96.364 | 110 | 4 | 0 | 341 | 450 | 15 | 124 | 1.86e-71 | 222 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269270 | AT1G16860.1 | 74.741 | 483 | 108 | 5 | 1 | 478 | 1 | 474 | 0.0 | 723 |
| Msa1269270 | AT1G78880.1 | 74.741 | 483 | 102 | 6 | 1 | 478 | 1 | 468 | 0.0 | 719 |
| Msa1269270 | AT4G22290.1 | 49.170 | 482 | 204 | 9 | 1 | 478 | 1 | 445 | 1.21e-146 | 427 |
Find 165 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 8_3:+2486297 | Msa1269270:CDS |
| TTCTATCTTCTTCATTCTTC+AGG | 0.199375 | 8_3:+2484519 | Msa1269270:five_prime_UTR |
| CTTGAAGGAGCGTTATTTAA+TGG | 0.218734 | 8_3:-2485640 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 8_3:+2485568 | Msa1269270:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 8_3:-2485502 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 8_3:+2489069 | Msa1269270:CDS |
| TGTTTCGATCTGTTGATTAA+TGG | 0.256726 | 8_3:+2489732 | Msa1269270:three_prime_UTR |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 8_3:-2486289 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 8_3:+2485943 | Msa1269270:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 8_3:-2485550 | None:intergenic |
| TTCTTTGATAAAACAATTGA+TGG | 0.320664 | 8_3:+2489467 | Msa1269270:three_prime_UTR |
| AGGAAATTCACGGATGTAAA+TGG | 0.325990 | 8_3:-2489566 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 8_3:+2485658 | Msa1269270:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 8_3:+2485922 | Msa1269270:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 8_3:+2488946 | Msa1269270:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 8_3:+2485616 | Msa1269270:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 8_3:+2489068 | Msa1269270:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 8_3:-2485892 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 8_3:-2489070 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.376875 | 8_3:+2486108 | Msa1269270:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 8_3:-2486075 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 8_3:-2485870 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 8_3:+2488970 | Msa1269270:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 8_3:-2485883 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 8_3:+2485961 | Msa1269270:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 8_3:-2485967 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 8_3:-2489069 | None:intergenic |
| GGGGACATGTCTTTATTCTC+TGG | 0.394165 | 8_3:-2489048 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 8_3:-2486160 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 8_3:+2488976 | Msa1269270:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 8_3:+2489241 | Msa1269270:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 8_3:-2486081 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 8_3:-2485511 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 8_3:+2485889 | Msa1269270:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 8_3:+2486298 | Msa1269270:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 8_3:-2485901 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 8_3:-2489360 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 8_3:+2485807 | Msa1269270:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 8_3:+2485708 | Msa1269270:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 8_3:-2486167 | None:intergenic |
| TGTAAGCATATATGTGTTGT+TGG | 0.422451 | 8_3:+2489522 | Msa1269270:three_prime_UTR |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 8_3:-2488960 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 8_3:+2485904 | Msa1269270:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 8_3:-2486267 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 8_3:+2486196 | Msa1269270:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 8_3:-2485826 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 8_3:+2486043 | Msa1269270:CDS |
| TGATGGTGGTGGTGGGTGGG+TGG | 0.447382 | 8_3:+2489484 | Msa1269270:three_prime_UTR |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 8_3:+2485962 | Msa1269270:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 8_3:+2485835 | Msa1269270:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 8_3:+2489070 | Msa1269270:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 8_3:-2486074 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 8_3:+2485676 | Msa1269270:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 8_3:+2485569 | Msa1269270:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 8_3:+2489117 | Msa1269270:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 8_3:+2489304 | Msa1269270:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 8_3:-2486688 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 8_3:-2485655 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 8_3:-2489307 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 8_3:+2485923 | Msa1269270:CDS |
| AAAACAGGTGCTGCAACAAC+TGG | 0.464653 | 8_3:-2484274 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 8_3:+2486228 | Msa1269270:CDS |
| CATTAAATAACGCTCCTTCA+AGG | 0.473559 | 8_3:+2485641 | Msa1269270:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 8_3:+2485858 | Msa1269270:CDS |
| CAATTGATGGTGGTGGTGGG+TGG | 0.479323 | 8_3:+2489480 | Msa1269270:three_prime_UTR |
| TGAGAGAAAGAGAAAGACAA+TGG | 0.479606 | 8_3:+2484453 | Msa1269270:five_prime_UTR |
| TGAGTTGAGTATGAAACAAA+AGG | 0.481992 | 8_3:-2489586 | None:intergenic |
| CTGAGTGAGTGAGTCTCTCT+AGG | 0.482847 | 8_3:+2489436 | Msa1269270:three_prime_UTR |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 8_3:+2485724 | Msa1269270:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 8_3:+2486632 | Msa1269270:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 8_3:-2485977 | None:intergenic |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 8_3:+2489240 | Msa1269270:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 8_3:-2489313 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 8_3:-2489323 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 8_3:-2485949 | None:intergenic |
| AAAACAATTGATGGTGGTGG+TGG | 0.496287 | 8_3:+2489476 | Msa1269270:three_prime_UTR |
| ATTAGCTATACAACAAACTA+AGG | 0.496458 | 8_3:-2489610 | None:intergenic |
| AATTGATGGTGGTGGTGGGT+GGG | 0.496921 | 8_3:+2489481 | Msa1269270:three_prime_UTR |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 8_3:-2489301 | None:intergenic |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 8_3:+2485770 | Msa1269270:CDS |
| ACAATACCTTCAAGGCTAGC+AGG | 0.499834 | 8_3:-2489352 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.500838 | 8_3:-2485607 | None:intergenic |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 8_3:-2489012 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 8_3:-2485526 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 8_3:+2485559 | Msa1269270:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 8_3:-2486611 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 8_3:+2488960 | Msa1269270:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 8_3:-2486058 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 8_3:+2485742 | Msa1269270:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 8_3:+2485500 | Msa1269270:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 8_3:+2485841 | Msa1269270:CDS |
| GAGAGAAAGAGAAAGACAAT+GGG | 0.524985 | 8_3:+2484454 | Msa1269270:five_prime_UTR |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 8_3:+2486276 | Msa1269270:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 8_3:+2485475 | Msa1269270:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 8_3:+2485538 | Msa1269270:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 8_3:+2485823 | Msa1269270:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 8_3:+2488984 | Msa1269270:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 8_3:-2485460 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 8_3:+2488983 | Msa1269270:CDS |
| ATGAAACAAAAGGAAATTCA+CGG | 0.533327 | 8_3:-2489576 | None:intergenic |
| ATCAGCGAAGCGAACTAGTA+CGG | 0.537951 | 8_3:+2485374 | Msa1269270:five_prime_UTR |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 8_3:+2485474 | Msa1269270:CDS |
| AATAACGCTCCTTCAAGGAC+TGG | 0.539760 | 8_3:+2485646 | Msa1269270:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 8_3:+2485936 | Msa1269270:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 8_3:-2485927 | None:intergenic |
| ATTTGAAAAGATATCAGTGA+TGG | 0.540525 | 8_3:+2485426 | Msa1269270:exon |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 8_3:+2486636 | Msa1269270:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 8_3:-2489077 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 8_3:+2485434 | Msa1269270:exon |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 8_3:+2486214 | Msa1269270:CDS |
| TAGATTTGGAACCATCCATA+GGG | 0.554139 | 8_3:-2485606 | None:intergenic |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 8_3:-2485483 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 8_3:-2486630 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 8_3:-2486696 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 8_3:-2489101 | None:intergenic |
| GAAAATGTTTGATATCCCTA+TGG | 0.559261 | 8_3:+2485591 | Msa1269270:CDS |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 8_3:+2485932 | Msa1269270:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 8_3:+2485838 | Msa1269270:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 8_3:-2485459 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 8_3:-2486021 | None:intergenic |
| ATGTTTGATATCCCTATGGA+TGG | 0.566234 | 8_3:+2485595 | Msa1269270:CDS |
| CTAGAGAGACTCACTCACTC+AGG | 0.567812 | 8_3:-2489435 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 8_3:+2486290 | Msa1269270:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 8_3:-2485498 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 8_3:-2489304 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 8_3:+2486637 | Msa1269270:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 8_3:+2485859 | Msa1269270:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 8_3:-2486570 | None:intergenic |
| AAACAATTGATGGTGGTGGT+GGG | 0.585983 | 8_3:+2489477 | Msa1269270:three_prime_UTR |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 8_3:+2486210 | Msa1269270:CDS |
| GATAAAACAATTGATGGTGG+TGG | 0.587903 | 8_3:+2489473 | Msa1269270:three_prime_UTR |
| TAGAGAGACTCACTCACTCA+GGG | 0.589043 | 8_3:-2489434 | None:intergenic |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 8_3:-2485805 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 8_3:+2489314 | Msa1269270:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 8_3:-2485557 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 8_3:+2486111 | Msa1269270:CDS |
| TTTGAAAAGATATCAGTGAT+GGG | 0.606674 | 8_3:+2485427 | Msa1269270:exon |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 8_3:+2485781 | Msa1269270:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 8_3:-2485545 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 8_3:-2485928 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 8_3:+2485460 | Msa1269270:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 8_3:+2489118 | Msa1269270:CDS |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 8_3:+2488915 | Msa1269270:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 8_3:+2485800 | Msa1269270:CDS |
| TTTGATAAAACAATTGATGG+TGG | 0.633000 | 8_3:+2489470 | Msa1269270:three_prime_UTR |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 8_3:-2485889 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 8_3:-2485839 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 8_3:+2486299 | Msa1269270:CDS |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 8_3:-2489068 | None:intergenic |
| CAGGTGCTGCAACAACTGGT+AGG | 0.646360 | 8_3:-2484270 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 8_3:+2485799 | Msa1269270:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 8_3:+2486262 | Msa1269270:CDS |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 8_3:+2485924 | Msa1269270:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 8_3:+2489228 | Msa1269270:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 8_3:+2489315 | Msa1269270:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 8_3:+2485541 | Msa1269270:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 8_3:+2486697 | Msa1269270:CDS |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 8_3:+2486070 | Msa1269270:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 8_3:-2486152 | None:intergenic |
| TGGATTGACATCAATTACAA+CGG | 0.676526 | 8_3:-2489028 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 8_3:-2485847 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 8_3:+2486023 | Msa1269270:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 8_3:-2489067 | None:intergenic |
| AGAGAGACTCACTCACTCAG+GGG | 0.726067 | 8_3:-2489433 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 8_3:+2485801 | Msa1269270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAATTCTATATAATTAT+TGG | + | chr8_3:2485006-2485025 | Msa1269270:intron | 10.0% |
| !!! | TATATTTTTCTTTCAAATAA+AGG | - | chr8_3:2488563-2488582 | None:intergenic | 10.0% |
| !!! | TTTTTTAACTTTTATAGTAG+TGG | + | chr8_3:2484335-2484354 | Msa1269270:intron | 15.0% |
| !!! | AAAAATAGATTTTTCGAAAT+GGG | - | chr8_3:2484652-2484671 | None:intergenic | 15.0% |
| !!! | AAAAAATAGATTTTTCGAAA+TGG | - | chr8_3:2484653-2484672 | None:intergenic | 15.0% |
| !! | TATATAGAATTGAAATTGAA+AGG | - | chr8_3:2485001-2485020 | None:intergenic | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | + | chr8_3:2488284-2488303 | Msa1269270:intron | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | + | chr8_3:2488492-2488511 | Msa1269270:intron | 15.0% |
| !!! | ATTTATCAGATTATGACTTT+TGG | + | chr8_3:2484683-2484702 | Msa1269270:intron | 20.0% |
| !!! | TTTATCAGATTATGACTTTT+GGG | + | chr8_3:2484684-2484703 | Msa1269270:intron | 20.0% |
| !! | ACTCAATAATGATATATGAA+TGG | + | chr8_3:2484766-2484785 | Msa1269270:intron | 20.0% |
| !!! | CTATCTAACTAATTTTACTT+TGG | + | chr8_3:2484859-2484878 | Msa1269270:intron | 20.0% |
| !! | TAAAAACAAAAACTATGTAG+TGG | - | chr8_3:2484967-2484986 | None:intergenic | 20.0% |
| !!! | GTAATTAGTTTATCTTATCT+TGG | + | chr8_3:2485115-2485134 | Msa1269270:intron | 20.0% |
| !! | AATTATCATAATAACAATGC+TGG | - | chr8_3:2485165-2485184 | None:intergenic | 20.0% |
| !!! | ATTCTGTTTCAATCTTTTTT+AGG | + | chr8_3:2485317-2485336 | Msa1269270:intron | 20.0% |
| !! | AAAGAATTACTACAACAATA+AGG | - | chr8_3:2486170-2486189 | None:intergenic | 20.0% |
| !! | CAAAAGTTACAATATATCAA+TGG | - | chr8_3:2486540-2486559 | None:intergenic | 20.0% |
| !!! | TGATATATTGTAACTTTTGA+AGG | + | chr8_3:2486541-2486560 | Msa1269270:intron | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | - | chr8_3:2486812-2486831 | None:intergenic | 20.0% |
| !! | TATTGAATGAACCTAAAAAA+TGG | + | chr8_3:2487069-2487088 | Msa1269270:intron | 20.0% |
| !!! | TAAGCAAAAATCCATTTTTT+AGG | - | chr8_3:2487083-2487102 | None:intergenic | 20.0% |
| !! | TCTAACTTATACAATGAATT+TGG | + | chr8_3:2487127-2487146 | Msa1269270:intron | 20.0% |
| !! | CTAACTTATACAATGAATTT+GGG | + | chr8_3:2487128-2487147 | Msa1269270:intron | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | + | chr8_3:2487231-2487250 | Msa1269270:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | + | chr8_3:2487232-2487251 | Msa1269270:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | - | chr8_3:2487845-2487864 | None:intergenic | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | + | chr8_3:2488294-2488313 | Msa1269270:intron | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | - | chr8_3:2488351-2488370 | None:intergenic | 20.0% |
| !!! | ATCATTATTTCTTTCTTGTT+TGG | + | chr8_3:2488438-2488457 | Msa1269270:intron | 20.0% |
| !!! | TCATTATTTCTTTCTTGTTT+GGG | + | chr8_3:2488439-2488458 | Msa1269270:intron | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | - | chr8_3:2488484-2488503 | None:intergenic | 20.0% |
| !!! | AGAATGCAAATTGTATATTT+TGG | + | chr8_3:2488834-2488853 | Msa1269270:intron | 20.0% |
| !!! | GAATGCAAATTGTATATTTT+GGG | + | chr8_3:2488835-2488854 | Msa1269270:intron | 20.0% |
| !!! | AATGCAAATTGTATATTTTG+GGG | + | chr8_3:2488836-2488855 | Msa1269270:intron | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | - | chr8_3:2488908-2488927 | None:intergenic | 20.0% |
| !! | TTCTTTGATAAAACAATTGA+TGG | + | chr8_3:2489467-2489486 | Msa1269270:three_prime_UTR | 20.0% |
| !!! | AGAATTTCAAACTTTTTGAA+TGG | + | chr8_3:2489662-2489681 | Msa1269270:three_prime_UTR | 20.0% |
| ! | TAGAATAGAATCAAAAAGAG+TGG | - | chr8_3:2484504-2484523 | None:intergenic | 25.0% |
| !! | TTATCAGATTATGACTTTTG+GGG | + | chr8_3:2484685-2484704 | Msa1269270:intron | 25.0% |
| ! | TTGCACATTGTAATAAAACT+TGG | + | chr8_3:2484716-2484735 | Msa1269270:intron | 25.0% |
| ! | TGCACATTGTAATAAAACTT+GGG | + | chr8_3:2484717-2484736 | Msa1269270:intron | 25.0% |
| !! | CTAACTAATTTTACTTTGGA+TGG | + | chr8_3:2484863-2484882 | Msa1269270:intron | 25.0% |
| !! | TAATTTTACTTTGGATGGTA+AGG | + | chr8_3:2484868-2484887 | Msa1269270:intron | 25.0% |
| ! | GTAAAGTAAGAATGAAGAAA+AGG | - | chr8_3:2484914-2484933 | None:intergenic | 25.0% |
| ! | GAAAGGGTAAATTAAAATGA+TGG | - | chr8_3:2484936-2484955 | None:intergenic | 25.0% |
| ! | TTCATCATAGTTATAGTCTA+AGG | + | chr8_3:2485213-2485232 | Msa1269270:intron | 25.0% |
| ! | ATTTGAAAAGATATCAGTGA+TGG | + | chr8_3:2485426-2485445 | Msa1269270:exon | 25.0% |
| ! | TTTGAAAAGATATCAGTGAT+GGG | + | chr8_3:2485427-2485446 | Msa1269270:exon | 25.0% |
| ! | TTCAAAACATGAATGATTGA+TGG | + | chr8_3:2486507-2486526 | Msa1269270:intron | 25.0% |
| !!! | TATATTGTAACTTTTGAAGG+TGG | + | chr8_3:2486544-2486563 | Msa1269270:intron | 25.0% |
| ! | TGTCGAATTCAAATAAAACT+TGG | - | chr8_3:2486760-2486779 | None:intergenic | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | - | chr8_3:2486901-2486920 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | + | chr8_3:2486950-2486969 | Msa1269270:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr8_3:2487093-2487112 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr8_3:2487019-2487038 | Msa1269270:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr8_3:2487093-2487112 | Msa1269270:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | + | chr8_3:2487198-2487217 | Msa1269270:intron | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | + | chr8_3:2487199-2487218 | Msa1269270:intron | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | - | chr8_3:2487281-2487300 | None:intergenic | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | + | chr8_3:2487382-2487401 | Msa1269270:intron | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | + | chr8_3:2487383-2487402 | Msa1269270:intron | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | - | chr8_3:2487763-2487782 | None:intergenic | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | - | chr8_3:2487764-2487783 | None:intergenic | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | - | chr8_3:2487788-2487807 | None:intergenic | 25.0% |
| !! | AATTTTTCTTCATTTTGTGC+CGG | - | chr8_3:2487962-2487981 | None:intergenic | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | - | chr8_3:2488034-2488053 | None:intergenic | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | + | chr8_3:2488031-2488050 | Msa1269270:intron | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | + | chr8_3:2488593-2488612 | Msa1269270:intron | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | + | chr8_3:2488771-2488790 | Msa1269270:intron | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | - | chr8_3:2488775-2488794 | None:intergenic | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | + | chr8_3:2488793-2488812 | Msa1269270:intron | 25.0% |
| ! | TACAATTTGCATTCTGATAT+AGG | - | chr8_3:2488829-2488848 | None:intergenic | 25.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | + | chr8_3:2489185-2489204 | Msa1269270:intron | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | + | chr8_3:2489220-2489239 | Msa1269270:intron | 25.0% |
| ! | TTTGATAAAACAATTGATGG+TGG | + | chr8_3:2489470-2489489 | Msa1269270:three_prime_UTR | 25.0% |
| ! | ATGAAACAAAAGGAAATTCA+CGG | - | chr8_3:2489579-2489598 | None:intergenic | 25.0% |
| ! | ATTAGCTATACAACAAACTA+AGG | - | chr8_3:2489613-2489632 | None:intergenic | 25.0% |
| !! | CAAAAAGTTTGAAATTCTCA+AGG | - | chr8_3:2489660-2489679 | None:intergenic | 25.0% |
| TCTCTCTCTCTTAAAAAAAC+AGG | - | chr8_3:2484292-2484311 | None:intergenic | 30.0% | |
| TTCTATCTTCTTCATTCTTC+AGG | + | chr8_3:2484519-2484538 | Msa1269270:five_prime_UTR | 30.0% | |
| TTGCATTCATACTCTTCAAA+TGG | + | chr8_3:2484620-2484639 | Msa1269270:intron | 30.0% | |
| TGCATTCATACTCTTCAAAT+GGG | + | chr8_3:2484621-2484640 | Msa1269270:intron | 30.0% | |
| AGAGAAATTTGGAAGTGAAA+TGG | - | chr8_3:2484824-2484843 | None:intergenic | 30.0% | |
| ATCTAGAGGAAAGAGAAATT+TGG | - | chr8_3:2484835-2484854 | None:intergenic | 30.0% | |
| AGTTAGATAGATAGATCTAG+AGG | - | chr8_3:2484849-2484868 | None:intergenic | 30.0% | |
| TGTAGTGGTGTTTAAAGAAA+GGG | - | chr8_3:2484952-2484971 | None:intergenic | 30.0% | |
| ATGTAGTGGTGTTTAAAGAA+AGG | - | chr8_3:2484953-2484972 | None:intergenic | 30.0% | |
| ! | AATAACAATGCTGGATTTTC+TGG | - | chr8_3:2485156-2485175 | None:intergenic | 30.0% |
| !!! | CTGTTTCAATCTTTTTTAGG+TGG | + | chr8_3:2485320-2485339 | Msa1269270:intron | 30.0% |
| GAAAATGTTTGATATCCCTA+TGG | + | chr8_3:2485591-2485610 | Msa1269270:CDS | 30.0% | |
| ! | ATTTGATTTCATTGACCCTA+AGG | - | chr8_3:2485980-2485999 | None:intergenic | 30.0% |
| ! | TGTGATTCTGATTTTCGTTA+TGG | + | chr8_3:2486095-2486114 | Msa1269270:CDS | 30.0% |
| ! | GTGATTCTGATTTTCGTTAT+GGG | + | chr8_3:2486096-2486115 | Msa1269270:CDS | 30.0% |
| TACTACAACAATAAGGAGTA+TGG | - | chr8_3:2486163-2486182 | None:intergenic | 30.0% | |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | + | chr8_3:2486176-2486195 | Msa1269270:CDS | 30.0% |
| AAATACAGTCAAACAATGTG+TGG | - | chr8_3:2486413-2486432 | None:intergenic | 30.0% | |
| ! | GTATTTTTCTCATTCATCCA+TGG | + | chr8_3:2486427-2486446 | Msa1269270:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | - | chr8_3:2486600-2486619 | None:intergenic | 30.0% |
| TCTATATTCATACAAGCTAG+TGG | - | chr8_3:2486633-2486652 | None:intergenic | 30.0% | |
| ! | ACTAGCTTGTATGAATATAG+AGG | + | chr8_3:2486632-2486651 | Msa1269270:CDS | 30.0% |
| CTTGTATGAATATAGAGGAT+GGG | + | chr8_3:2486637-2486656 | Msa1269270:CDS | 30.0% | |
| !! | TGTAATTTGCTTATGTGAAC+TGG | + | chr8_3:2486847-2486866 | Msa1269270:intron | 30.0% |
| ACTGGTAAGAGATAATCAAA+AGG | + | chr8_3:2486865-2486884 | Msa1269270:intron | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | + | chr8_3:2486866-2486885 | Msa1269270:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | - | chr8_3:2487154-2487173 | None:intergenic | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | - | chr8_3:2487282-2487301 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | + | chr8_3:2487279-2487298 | Msa1269270:intron | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | + | chr8_3:2487282-2487301 | Msa1269270:intron | 30.0% | |
| ! | ATGGACAATGTATCTAGAAT+AGG | + | chr8_3:2487349-2487368 | Msa1269270:intron | 30.0% |
| TCTTACAAACCAACTTTGTA+GGG | - | chr8_3:2487425-2487444 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | - | chr8_3:2487426-2487445 | None:intergenic | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | - | chr8_3:2487457-2487476 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | - | chr8_3:2487458-2487477 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | + | chr8_3:2487458-2487477 | Msa1269270:intron | 30.0% | |
| !! | TCTTCTTTAGGGCTAATAAT+GGG | - | chr8_3:2487752-2487771 | None:intergenic | 30.0% |
| !! | TTCTTCTTTAGGGCTAATAA+TGG | - | chr8_3:2487753-2487772 | None:intergenic | 30.0% |
| ATGCAACTTATAAATGGTAG+AGG | - | chr8_3:2487839-2487858 | None:intergenic | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | + | chr8_3:2487856-2487875 | Msa1269270:intron | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | - | chr8_3:2487877-2487896 | None:intergenic | 30.0% | |
| TTTCTTTCAATCTACAGTGA+GGG | - | chr8_3:2487900-2487919 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | + | chr8_3:2488087-2488106 | Msa1269270:intron | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | + | chr8_3:2488116-2488135 | Msa1269270:intron | 30.0% |
| ! | TTAGTTACTTAAGCTTTGGT+GGG | + | chr8_3:2488164-2488183 | Msa1269270:intron | 30.0% |
| TAAAGGCTAGATAGAAACTA+GGG | - | chr8_3:2488546-2488565 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | - | chr8_3:2488547-2488566 | None:intergenic | 30.0% | |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | + | chr8_3:2488646-2488665 | Msa1269270:intron | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | + | chr8_3:2488647-2488666 | Msa1269270:intron | 30.0% |
| ATCAAGAATAGTCCCTTATT+AGG | + | chr8_3:2488705-2488724 | Msa1269270:intron | 30.0% | |
| GAAGACATACTACCTAATAA+GGG | - | chr8_3:2488720-2488739 | None:intergenic | 30.0% | |
| TGAAGACATACTACCTAATA+AGG | - | chr8_3:2488721-2488740 | None:intergenic | 30.0% | |
| !! | ATTGTATATTTTGGGGACTT+TGG | + | chr8_3:2488843-2488862 | Msa1269270:intron | 30.0% |
| TGGATTGACATCAATTACAA+CGG | - | chr8_3:2489031-2489050 | None:intergenic | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | + | chr8_3:2489118-2489137 | Msa1269270:CDS | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | - | chr8_3:2489363-2489382 | None:intergenic | 30.0% | |
| GGATAAAAAGATAACTACAC+TGG | - | chr8_3:2489415-2489434 | None:intergenic | 30.0% | |
| TGTAAGCATATATGTGTTGT+TGG | + | chr8_3:2489522-2489541 | Msa1269270:three_prime_UTR | 30.0% | |
| ! | TGAGTTGAGTATGAAACAAA+AGG | - | chr8_3:2489589-2489608 | None:intergenic | 30.0% |
| ! | TGTTTCGATCTGTTGATTAA+TGG | + | chr8_3:2489732-2489751 | Msa1269270:three_prime_UTR | 30.0% |
| AGAGAGAGAGAAGAAAAAAG+AGG | + | chr8_3:2484399-2484418 | Msa1269270:five_prime_UTR | 35.0% | |
| TGAGAGAAAGAGAAAGACAA+TGG | + | chr8_3:2484453-2484472 | Msa1269270:five_prime_UTR | 35.0% | |
| GAGAGAAAGAGAAAGACAAT+GGG | + | chr8_3:2484454-2484473 | Msa1269270:five_prime_UTR | 35.0% | |
| AGCGAAGATCTGAGAAAAAT+GGG | - | chr8_3:2484598-2484617 | None:intergenic | 35.0% | |
| GCATTCATACTCTTCAAATG+GGG | + | chr8_3:2484622-2484641 | Msa1269270:intron | 35.0% | |
| CATTCATACTCTTCAAATGG+GGG | + | chr8_3:2484623-2484642 | Msa1269270:intron | 35.0% | |
| ! | CGCAACATGTTTACATTTTG+AGG | + | chr8_3:2484793-2484812 | Msa1269270:intron | 35.0% |
| !! | TTTTAGGTGGCATTGTTTTG+CGG | + | chr8_3:2485333-2485352 | Msa1269270:intron | 35.0% |
| ATTGTTGGAGTCCTTTCTTT+CGG | - | chr8_3:2485514-2485533 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | + | chr8_3:2485568-2485587 | Msa1269270:CDS | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | + | chr8_3:2485569-2485588 | Msa1269270:CDS | 35.0% | |
| ATGTTTGATATCCCTATGGA+TGG | + | chr8_3:2485595-2485614 | Msa1269270:CDS | 35.0% | |
| ! | TAGATTTGGAACCATCCATA+GGG | - | chr8_3:2485609-2485628 | None:intergenic | 35.0% |
| GGTTCCAAATCTAGAAAATC+TGG | + | chr8_3:2485616-2485635 | Msa1269270:CDS | 35.0% | |
| ! | TGGACCAGATTTTCTAGATT+TGG | - | chr8_3:2485623-2485642 | None:intergenic | 35.0% |
| !! | CTTGAAGGAGCGTTATTTAA+TGG | - | chr8_3:2485643-2485662 | None:intergenic | 35.0% |
| CATTAAATAACGCTCCTTCA+AGG | + | chr8_3:2485641-2485660 | Msa1269270:CDS | 35.0% | |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | - | chr8_3:2485782-2485801 | None:intergenic | 35.0% |
| TCAATGAAAAGGACAAACTC+AGG | + | chr8_3:2485781-2485800 | Msa1269270:CDS | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | - | chr8_3:2485904-2485923 | None:intergenic | 35.0% | |
| !! | ACAACTGGTTTGATTACATC+TGG | + | chr8_3:2485904-2485923 | Msa1269270:CDS | 35.0% |
| TGGATGATGAATATTCCTTC+AGG | + | chr8_3:2486043-2486062 | Msa1269270:CDS | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | - | chr8_3:2486084-2486103 | None:intergenic | 35.0% | |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | + | chr8_3:2486123-2486142 | Msa1269270:CDS | 35.0% |
| CCACTTTATGAACTAATCCA+TGG | - | chr8_3:2486447-2486466 | None:intergenic | 35.0% | |
| !! | CCATGGATTAGTTCATAAAG+TGG | + | chr8_3:2486444-2486463 | Msa1269270:intron | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | - | chr8_3:2486587-2486606 | None:intergenic | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | - | chr8_3:2486597-2486616 | None:intergenic | 35.0% |
| GTGGATGTATATACACATCT+TGG | - | chr8_3:2486614-2486633 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | + | chr8_3:2486636-2486655 | Msa1269270:CDS | 35.0% | |
| AAGTTAGATTATACACCCTC+CGG | - | chr8_3:2487115-2487134 | None:intergenic | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | + | chr8_3:2487145-2487164 | Msa1269270:intron | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | - | chr8_3:2487388-2487407 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | - | chr8_3:2487462-2487481 | None:intergenic | 35.0% | |
| ! | CCAACACTTTCATTGTTGTT+GGG | - | chr8_3:2487515-2487534 | None:intergenic | 35.0% |
| TCCAACACTTTCATTGTTGT+TGG | - | chr8_3:2487516-2487535 | None:intergenic | 35.0% | |
| !! | AACAACAATGAAAGTGTTGG+AGG | + | chr8_3:2487515-2487534 | Msa1269270:intron | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | - | chr8_3:2487681-2487700 | None:intergenic | 35.0% |
| TGACATAGCAAACATCAGAA+TGG | + | chr8_3:2487687-2487706 | Msa1269270:intron | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | + | chr8_3:2487691-2487710 | Msa1269270:intron | 35.0% | |
| GTTTCTTTCAATCTACAGTG+AGG | - | chr8_3:2487901-2487920 | None:intergenic | 35.0% | |
| ! | TACACGTTCAACCAATTTTC+CGG | + | chr8_3:2487940-2487959 | Msa1269270:intron | 35.0% |
| ! | TTCATTTTGTGCCGGAAAAT+TGG | - | chr8_3:2487954-2487973 | None:intergenic | 35.0% |
| CATATAAGCATCTTCTAACG+TGG | + | chr8_3:2488006-2488025 | Msa1269270:intron | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | - | chr8_3:2488088-2488107 | None:intergenic | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | + | chr8_3:2488086-2488105 | Msa1269270:intron | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | + | chr8_3:2488129-2488148 | Msa1269270:intron | 35.0% |
| !! | TGGGTTAGTTACTTAAGCTT+TGG | + | chr8_3:2488160-2488179 | Msa1269270:intron | 35.0% |
| ! | GTTAGTTACTTAAGCTTTGG+TGG | + | chr8_3:2488163-2488182 | Msa1269270:intron | 35.0% |
| ! | TAGTTACTTAAGCTTTGGTG+GGG | + | chr8_3:2488165-2488184 | Msa1269270:intron | 35.0% |
| TCATCTTCGATGAAAGTTCT+TGG | - | chr8_3:2488209-2488228 | None:intergenic | 35.0% | |
| AACTTTCATCGAAGATGAGA+TGG | + | chr8_3:2488211-2488230 | Msa1269270:intron | 35.0% | |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | - | chr8_3:2488340-2488359 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | + | chr8_3:2488648-2488667 | Msa1269270:intron | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | + | chr8_3:2488649-2488668 | Msa1269270:intron | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | + | chr8_3:2488660-2488679 | Msa1269270:intron | 35.0% |
| TGTCTTCATGTCTGATGTTA+TGG | + | chr8_3:2488733-2488752 | Msa1269270:intron | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | + | chr8_3:2488915-2488934 | Msa1269270:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | - | chr8_3:2489104-2489123 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | + | chr8_3:2489117-2489136 | Msa1269270:CDS | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | + | chr8_3:2489188-2489207 | Msa1269270:intron | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | + | chr8_3:2489228-2489247 | Msa1269270:CDS | 35.0% | |
| !! | GATAAAACAATTGATGGTGG+TGG | + | chr8_3:2489473-2489492 | Msa1269270:three_prime_UTR | 35.0% |
| AGGAAATTCACGGATGTAAA+TGG | - | chr8_3:2489569-2489588 | None:intergenic | 35.0% | |
| AGAATCAAAAAGAGTGGCGA+TGG | - | chr8_3:2484498-2484517 | None:intergenic | 40.0% | |
| GAGCGAAGATCTGAGAAAAA+TGG | - | chr8_3:2484599-2484618 | None:intergenic | 40.0% | |
| !! | CTGGATTTTCTGGTACATGA+TGG | - | chr8_3:2485146-2485165 | None:intergenic | 40.0% |
| CATTGCTTAGCTGATGAGAT+GGG | - | chr8_3:2485462-2485481 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | + | chr8_3:2485474-2485493 | Msa1269270:CDS | 40.0% | |
| ! | CTAGATTTGGAACCATCCAT+AGG | - | chr8_3:2485610-2485629 | None:intergenic | 40.0% |
| CTACTTCAGCCTCAATGAAA+AGG | + | chr8_3:2485770-2485789 | Msa1269270:CDS | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | + | chr8_3:2485799-2485818 | Msa1269270:CDS | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | - | chr8_3:2485895-2485914 | None:intergenic | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | - | chr8_3:2485970-2485989 | None:intergenic | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | + | chr8_3:2486070-2486089 | Msa1269270:CDS | 40.0% | |
| !! | CAGACCACAATATTGGCTTT+GGG | - | chr8_3:2486077-2486096 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | - | chr8_3:2486078-2486097 | None:intergenic | 40.0% |
| TTCGTTATGGGATTCATTGC+TGG | + | chr8_3:2486108-2486127 | Msa1269270:CDS | 40.0% | |
| ! | CAATAAGGAGTATGGCATTG+CGG | - | chr8_3:2486155-2486174 | None:intergenic | 40.0% |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | + | chr8_3:2486179-2486198 | Msa1269270:CDS | 40.0% |
| TTCACTTGGAATAGTTGTCG+TGG | + | chr8_3:2486210-2486229 | Msa1269270:CDS | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | - | chr8_3:2486292-2486311 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | + | chr8_3:2486290-2486309 | Msa1269270:CDS | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | + | chr8_3:2486298-2486317 | Msa1269270:CDS | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | + | chr8_3:2486299-2486318 | Msa1269270:CDS | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | - | chr8_3:2486387-2486406 | None:intergenic | 40.0% | |
| AAACAATGTGTGGCAAGTGT+TGG | - | chr8_3:2486403-2486422 | None:intergenic | 40.0% | |
| !! | TAAACATCGCCGTTTTACCT+GGG | + | chr8_3:2486679-2486698 | Msa1269270:CDS | 40.0% |
| TGCGACTGCTTGAAATACTT+TGG | + | chr8_3:2486786-2486805 | Msa1269270:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | + | chr8_3:2486792-2486811 | Msa1269270:intron | 40.0% | |
| ! | GAGGGTGTACCATGTAATTA+GGG | - | chr8_3:2486962-2486981 | None:intergenic | 40.0% |
| TAATTACATGGTACACCCTC+CGG | + | chr8_3:2486962-2486981 | Msa1269270:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr8_3:2487097-2487116 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr8_3:2487096-2487115 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr8_3:2487096-2487115 | Msa1269270:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | + | chr8_3:2487097-2487116 | Msa1269270:intron | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | - | chr8_3:2487295-2487314 | None:intergenic | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | - | chr8_3:2487344-2487363 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | - | chr8_3:2487415-2487434 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | + | chr8_3:2487413-2487432 | Msa1269270:intron | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | + | chr8_3:2487471-2487490 | Msa1269270:intron | 40.0% | |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | - | chr8_3:2487508-2487527 | None:intergenic | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | + | chr8_3:2487512-2487531 | Msa1269270:intron | 40.0% |
| TATCTGCACTATGTCGTAGT+GGG | - | chr8_3:2487643-2487662 | None:intergenic | 40.0% | |
| ATATCTGCACTATGTCGTAG+TGG | - | chr8_3:2487644-2487663 | None:intergenic | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | - | chr8_3:2487827-2487846 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | - | chr8_3:2487828-2487847 | None:intergenic | 40.0% | |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | + | chr8_3:2488106-2488125 | Msa1269270:intron | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | + | chr8_3:2488128-2488147 | Msa1269270:intron | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | + | chr8_3:2488130-2488149 | Msa1269270:intron | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | + | chr8_3:2488131-2488150 | Msa1269270:intron | 40.0% |
| ATGAAACAAGGGGGGATATT+TGG | + | chr8_3:2488140-2488159 | Msa1269270:intron | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | + | chr8_3:2488141-2488160 | Msa1269270:intron | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | - | chr8_3:2488408-2488427 | None:intergenic | 40.0% | |
| ! | CCATCATAGTCATCGACTAT+TGG | + | chr8_3:2488405-2488424 | Msa1269270:intron | 40.0% |
| GATGATGTTATGGTGCAACA+AGG | - | chr8_3:2488474-2488493 | None:intergenic | 40.0% | |
| !! | TATATTTTGGGGACTTTGGC+AGG | + | chr8_3:2488847-2488866 | Msa1269270:intron | 40.0% |
| TACATCTCTGACTTCCAATC+TGG | + | chr8_3:2488946-2488965 | Msa1269270:CDS | 40.0% | |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | - | chr8_3:2488972-2488991 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | + | chr8_3:2488970-2488989 | Msa1269270:CDS | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | + | chr8_3:2488976-2488995 | Msa1269270:CDS | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | + | chr8_3:2488983-2489002 | Msa1269270:CDS | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | + | chr8_3:2488984-2489003 | Msa1269270:CDS | 40.0% |
| ACAACGGAATCGTCAACATA+AGG | - | chr8_3:2489015-2489034 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | - | chr8_3:2489333-2489352 | None:intergenic | 40.0% | |
| !!! | ATTTTTCCTGCTAGCCTTGA+AGG | + | chr8_3:2489346-2489365 | Msa1269270:CDS | 40.0% |
| !! | AAAACAATTGATGGTGGTGG+TGG | + | chr8_3:2489476-2489495 | Msa1269270:three_prime_UTR | 40.0% |
| !! | AAACAATTGATGGTGGTGGT+GGG | + | chr8_3:2489477-2489496 | Msa1269270:three_prime_UTR | 40.0% |
| ! | AAAACAGGTGCTGCAACAAC+TGG | - | chr8_3:2484277-2484296 | None:intergenic | 45.0% |
| ATCAGCGAAGCGAACTAGTA+CGG | + | chr8_3:2485374-2485393 | Msa1269270:five_prime_UTR | 45.0% | |
| !! | AGATATCAGTGATGGGTTCG+AGG | + | chr8_3:2485434-2485453 | Msa1269270:exon | 45.0% |
| CCATTGCTTAGCTGATGAGA+TGG | - | chr8_3:2485463-2485482 | None:intergenic | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | + | chr8_3:2485460-2485479 | Msa1269270:CDS | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | + | chr8_3:2485475-2485494 | Msa1269270:CDS | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | - | chr8_3:2485501-2485520 | None:intergenic | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | - | chr8_3:2485529-2485548 | None:intergenic | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | + | chr8_3:2485538-2485557 | Msa1269270:CDS | 45.0% | |
| AATAACGCTCCTTCAAGGAC+TGG | + | chr8_3:2485646-2485665 | Msa1269270:CDS | 45.0% | |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | - | chr8_3:2485703-2485722 | None:intergenic | 45.0% |
| TCAGGTAATCTATCTGCTGC+AGG | + | chr8_3:2485742-2485761 | Msa1269270:CDS | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | + | chr8_3:2485800-2485819 | Msa1269270:CDS | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | + | chr8_3:2485801-2485820 | Msa1269270:CDS | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | - | chr8_3:2485808-2485827 | None:intergenic | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | + | chr8_3:2485807-2485826 | Msa1269270:CDS | 45.0% | |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | - | chr8_3:2485886-2485905 | None:intergenic | 45.0% |
| AATGGACCAGAAACCTTCCT+TGG | - | chr8_3:2485952-2485971 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | + | chr8_3:2485961-2485980 | Msa1269270:CDS | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | + | chr8_3:2485962-2485981 | Msa1269270:CDS | 45.0% | |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | - | chr8_3:2486061-2486080 | None:intergenic | 45.0% |
| GTTATGGGATTCATTGCTGG+AGG | + | chr8_3:2486111-2486130 | Msa1269270:CDS | 45.0% | |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | + | chr8_3:2486182-2486201 | Msa1269270:CDS | 45.0% |
| CTTGGAATAGTTGTCGTGGA+AGG | + | chr8_3:2486214-2486233 | Msa1269270:CDS | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | + | chr8_3:2486228-2486247 | Msa1269270:CDS | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | + | chr8_3:2486262-2486281 | Msa1269270:CDS | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | + | chr8_3:2486297-2486316 | Msa1269270:CDS | 45.0% | |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | + | chr8_3:2486554-2486573 | Msa1269270:intron | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | + | chr8_3:2486678-2486697 | Msa1269270:CDS | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | + | chr8_3:2486680-2486699 | Msa1269270:CDS | 45.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | - | chr8_3:2486691-2486710 | None:intergenic | 45.0% | |
| ! | GGAGGGTGTACCATGTAATT+AGG | - | chr8_3:2486963-2486982 | None:intergenic | 45.0% |
| GCCATATCTCTAGGCAATGT+GGG | + | chr8_3:2487480-2487499 | Msa1269270:intron | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | - | chr8_3:2487484-2487503 | None:intergenic | 45.0% | |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | - | chr8_3:2487507-2487526 | None:intergenic | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | - | chr8_3:2487509-2487528 | None:intergenic | 45.0% |
| TTAGCTGATCCCACTTGTGT+TGG | - | chr8_3:2488099-2488118 | None:intergenic | 45.0% | |
| ! | GTAAAGGCATGAAACAAGGG+GGG | + | chr8_3:2488132-2488151 | Msa1269270:intron | 45.0% |
| TCATCGAAGATGAGATGGAG+TGG | + | chr8_3:2488216-2488235 | Msa1269270:intron | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | + | chr8_3:2488663-2488682 | Msa1269270:intron | 45.0% | |
| GGGGACATGTCTTTATTCTC+TGG | - | chr8_3:2489051-2489070 | None:intergenic | 45.0% | |
| !! | GGCGGCTATGATGTTTTTGT+AGG | + | chr8_3:2489206-2489225 | Msa1269270:intron | 45.0% |
| ACAATACCTTCAAGGCTAGC+AGG | - | chr8_3:2489355-2489374 | None:intergenic | 45.0% | |
| TAGAGAGACTCACTCACTCA+GGG | - | chr8_3:2489437-2489456 | None:intergenic | 45.0% | |
| !! | TTAAATTAAAACTATTAATA+TGG | + | chr8_3:2488362-2488381 | Msa1269270:intron | 5.0% |
| GTCCTGAACAGCCGAAAGAA+AGG | + | chr8_3:2485500-2485519 | Msa1269270:CDS | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | - | chr8_3:2485505-2485524 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | - | chr8_3:2485553-2485572 | None:intergenic | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | - | chr8_3:2485560-2485579 | None:intergenic | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | - | chr8_3:2485658-2485677 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | + | chr8_3:2485658-2485677 | Msa1269270:CDS | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | + | chr8_3:2485724-2485743 | Msa1269270:CDS | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | + | chr8_3:2485823-2485842 | Msa1269270:CDS | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | - | chr8_3:2485829-2485848 | None:intergenic | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | + | chr8_3:2485835-2485854 | Msa1269270:CDS | 50.0% | |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | - | chr8_3:2485873-2485892 | None:intergenic | 50.0% |
| CCAGTTGTTGGAAGAACTGG+AGG | - | chr8_3:2485892-2485911 | None:intergenic | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | + | chr8_3:2485889-2485908 | Msa1269270:CDS | 50.0% | |
| ! | TGAATTCATCTGGGGCTCCA+AGG | + | chr8_3:2485932-2485951 | Msa1269270:CDS | 50.0% |
| ACACTGAGAGTAGTCACAGC+TGG | - | chr8_3:2486024-2486043 | None:intergenic | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | + | chr8_3:2486023-2486042 | Msa1269270:CDS | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | - | chr8_3:2486573-2486592 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | + | chr8_3:2487479-2487498 | Msa1269270:intron | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | + | chr8_3:2487710-2487729 | Msa1269270:intron | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | + | chr8_3:2487724-2487743 | Msa1269270:intron | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | + | chr8_3:2488225-2488244 | Msa1269270:intron | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | + | chr8_3:2488226-2488245 | Msa1269270:intron | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | - | chr8_3:2489070-2489089 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | - | chr8_3:2489071-2489090 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | - | chr8_3:2489072-2489091 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | + | chr8_3:2489069-2489088 | Msa1269270:CDS | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | - | chr8_3:2489073-2489092 | None:intergenic | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | + | chr8_3:2489070-2489089 | Msa1269270:CDS | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | - | chr8_3:2489080-2489099 | None:intergenic | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | + | chr8_3:2489240-2489259 | Msa1269270:CDS | 50.0% | |
| AGAGAGACTCACTCACTCAG+GGG | - | chr8_3:2489436-2489455 | None:intergenic | 50.0% | |
| CTAGAGAGACTCACTCACTC+AGG | - | chr8_3:2489438-2489457 | None:intergenic | 50.0% | |
| CTGAGTGAGTGAGTCTCTCT+AGG | + | chr8_3:2489436-2489455 | Msa1269270:three_prime_UTR | 50.0% | |
| !! | AATTGATGGTGGTGGTGGGT+GGG | + | chr8_3:2489481-2489500 | Msa1269270:three_prime_UTR | 50.0% |
| ! | CAGGTGCTGCAACAACTGGT+AGG | - | chr8_3:2484273-2484292 | None:intergenic | 55.0% |
| GTTGCCATGCCTTATACCGG+CGG | + | chr8_3:2485541-2485560 | Msa1269270:CDS | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | + | chr8_3:2485559-2485578 | Msa1269270:CDS | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | + | chr8_3:2485708-2485727 | Msa1269270:CDS | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | + | chr8_3:2485838-2485857 | Msa1269270:CDS | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | - | chr8_3:2485842-2485861 | None:intergenic | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | + | chr8_3:2485841-2485860 | Msa1269270:CDS | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | + | chr8_3:2485858-2485877 | Msa1269270:CDS | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | + | chr8_3:2485922-2485941 | Msa1269270:CDS | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | + | chr8_3:2485923-2485942 | Msa1269270:CDS | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | + | chr8_3:2485924-2485943 | Msa1269270:CDS | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | - | chr8_3:2485930-2485949 | None:intergenic | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | - | chr8_3:2485931-2485950 | None:intergenic | 55.0% | |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | + | chr8_3:2485936-2485955 | Msa1269270:CDS | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | + | chr8_3:2486196-2486215 | Msa1269270:CDS | 55.0% |
| GAGCTGAGGACAGCCAAGAA+TGG | + | chr8_3:2486276-2486295 | Msa1269270:CDS | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | - | chr8_3:2486699-2486718 | None:intergenic | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | + | chr8_3:2486697-2486716 | Msa1269270:CDS | 55.0% | |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | - | chr8_3:2487318-2487337 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | - | chr8_3:2487319-2487338 | None:intergenic | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | - | chr8_3:2487320-2487339 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | - | chr8_3:2487321-2487340 | None:intergenic | 55.0% |
| CCCTCATGACCAAACCCGAT+GGG | + | chr8_3:2487318-2487337 | Msa1269270:intron | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | + | chr8_3:2487527-2487546 | Msa1269270:intron | 55.0% |
| CAACGAAGGCAGCTCAAGTG+TGG | + | chr8_3:2487541-2487560 | Msa1269270:intron | 55.0% | |
| ! | GGCACCAGATTCGAGTTTCC+TGG | - | chr8_3:2487731-2487750 | None:intergenic | 55.0% |
| ! | AAGCTTTGGTGGGGTCAGAC+TGG | + | chr8_3:2488174-2488193 | Msa1269270:intron | 55.0% |
| GAGATGGAGTGGTTGCAGAG+GGG | + | chr8_3:2488227-2488246 | Msa1269270:intron | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | - | chr8_3:2488963-2488982 | None:intergenic | 55.0% | |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | + | chr8_3:2488960-2488979 | Msa1269270:CDS | 55.0% |
| TGTCCCCCGATTTCCTTCGA+TGG | + | chr8_3:2489064-2489083 | Msa1269270:CDS | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | + | chr8_3:2489068-2489087 | Msa1269270:CDS | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | + | chr8_3:2489315-2489334 | Msa1269270:CDS | 55.0% | |
| ACATTTCGCCCACTGGCATC+CGG | - | chr8_3:2489326-2489345 | None:intergenic | 55.0% | |
| !! | CAATTGATGGTGGTGGTGGG+TGG | + | chr8_3:2489480-2489499 | Msa1269270:three_prime_UTR | 55.0% |
| CAGGACGGCCCGATACATAC+AGG | - | chr8_3:2485486-2485505 | None:intergenic | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | - | chr8_3:2485548-2485567 | None:intergenic | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | - | chr8_3:2485850-2485869 | None:intergenic | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | + | chr8_3:2485859-2485878 | Msa1269270:CDS | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | + | chr8_3:2485943-2485962 | Msa1269270:CDS | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | - | chr8_3:2486270-2486289 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | - | chr8_3:2487313-2487332 | None:intergenic | 60.0% | |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | - | chr8_3:2487317-2487336 | None:intergenic | 60.0% |
| CCCCTCATGACCAAACCCGA+TGG | + | chr8_3:2487317-2487336 | Msa1269270:intron | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | - | chr8_3:2487322-2487341 | None:intergenic | 60.0% |
| CATGACCAAACCCGATGGGC+CGG | + | chr8_3:2487322-2487341 | Msa1269270:intron | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | - | chr8_3:2487336-2487355 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | - | chr8_3:2489304-2489323 | None:intergenic | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | + | chr8_3:2489304-2489323 | Msa1269270:CDS | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | - | chr8_3:2489310-2489329 | None:intergenic | 60.0% | |
| CACTGGCATCCGGTCGTCAA+AGG | - | chr8_3:2489316-2489335 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | + | chr8_3:2489314-2489333 | Msa1269270:CDS | 60.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | - | chr8_3:2487330-2487349 | None:intergenic | 65.0% | |
| AACCCGATGGGCCGGAAGCA+TGG | + | chr8_3:2487330-2487349 | Msa1269270:intron | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | - | chr8_3:2487335-2487354 | None:intergenic | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | - | chr8_3:2489307-2489326 | None:intergenic | 65.0% | |
| !! | TGATGGTGGTGGTGGGTGGG+TGG | + | chr8_3:2489484-2489503 | Msa1269270:three_prime_UTR | 65.0% |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | + | chr8_3:2485676-2485695 | Msa1269270:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 2484264 | 2489770 | 2484264 | ID=Msa1269270;Name=Msa1269270 |
| chr8_3 | mRNA | 2484264 | 2489770 | 2484264 | ID=Msa1269270-mRNA-1;Parent=Msa1269270;Name=Msa1269270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=299|1|1|1|0.6|0.5|6|350|478 |
| chr8_3 | exon | 2484264 | 2484302 | 2484264 | ID=Msa1269270-mRNA-1:exon:775;Parent=Msa1269270-mRNA-1 |
| chr8_3 | exon | 2484387 | 2484540 | 2484387 | ID=Msa1269270-mRNA-1:exon:776;Parent=Msa1269270-mRNA-1 |
| chr8_3 | exon | 2485339 | 2486320 | 2485339 | ID=Msa1269270-mRNA-1:exon:777;Parent=Msa1269270-mRNA-1 |
| chr8_3 | exon | 2486563 | 2486718 | 2486563 | ID=Msa1269270-mRNA-1:exon:778;Parent=Msa1269270-mRNA-1 |
| chr8_3 | exon | 2488928 | 2489139 | 2488928 | ID=Msa1269270-mRNA-1:exon:779;Parent=Msa1269270-mRNA-1 |
| chr8_3 | exon | 2489228 | 2489770 | 2489228 | ID=Msa1269270-mRNA-1:exon:780;Parent=Msa1269270-mRNA-1 |
| chr8_3 | five_prime_UTR | 2484264 | 2484302 | 2484264 | ID=Msa1269270-mRNA-1:five_prime_utr;Parent=Msa1269270-mRNA-1 |
| chr8_3 | five_prime_UTR | 2484387 | 2484540 | 2484387 | ID=Msa1269270-mRNA-1:five_prime_utr;Parent=Msa1269270-mRNA-1 |
| chr8_3 | five_prime_UTR | 2485339 | 2485444 | 2485339 | ID=Msa1269270-mRNA-1:five_prime_utr;Parent=Msa1269270-mRNA-1 |
| chr8_3 | CDS | 2485445 | 2486320 | 2485445 | ID=Msa1269270-mRNA-1:cds;Parent=Msa1269270-mRNA-1 |
| chr8_3 | CDS | 2486563 | 2486718 | 2486563 | ID=Msa1269270-mRNA-1:cds;Parent=Msa1269270-mRNA-1 |
| chr8_3 | CDS | 2488928 | 2489139 | 2488928 | ID=Msa1269270-mRNA-1:cds;Parent=Msa1269270-mRNA-1 |
| chr8_3 | CDS | 2489228 | 2489420 | 2489228 | ID=Msa1269270-mRNA-1:cds;Parent=Msa1269270-mRNA-1 |
| chr8_3 | three_prime_UTR | 2489421 | 2489770 | 2489421 | ID=Msa1269270-mRNA-1:three_prime_utr;Parent=Msa1269270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
