Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089870 | XP_013454502.1 | 99.582 | 478 | 2 | 0 | 1 | 478 | 1 | 478 | 0.0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089870 | sp|Q9FZ45|Y1686_ARATH | 74.741 | 483 | 108 | 5 | 1 | 478 | 1 | 474 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089870 | A0A072UHD8 | 99.582 | 478 | 2 | 0 | 1 | 478 | 1 | 478 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037660 | Msa1089870 | 0.801545 | 8.561214e-49 | -8.615850e-47 |
| Msa0672420 | Msa1089870 | 0.813583 | 2.378694e-51 | -8.615850e-47 |
| Msa1089870 | Msa1269270 | 0.968724 | 4.372187e-129 | -8.615850e-47 |
| Msa0945080 | Msa1089870 | 0.848345 | 6.504589e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089870 | MtrunA17_Chr4g0000411 | 99.582 | 478 | 2 | 0 | 1 | 478 | 1 | 478 | 0.0 | 974 |
| Msa1089870 | MtrunA17_Chr4g0002141 | 70.637 | 487 | 83 | 4 | 1 | 478 | 1 | 436 | 0.0 | 678 |
| Msa1089870 | MtrunA17_Chr2g0289421 | 49.068 | 483 | 186 | 10 | 1 | 478 | 1 | 428 | 2.02e-150 | 435 |
| Msa1089870 | MtrunA17_Chr4g0051481 | 96.364 | 110 | 4 | 0 | 341 | 450 | 15 | 124 | 1.86e-71 | 222 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089870 | AT1G16860.1 | 74.741 | 483 | 108 | 5 | 1 | 478 | 1 | 474 | 0.0 | 723 |
| Msa1089870 | AT1G78880.1 | 74.741 | 483 | 102 | 6 | 1 | 478 | 1 | 468 | 0.0 | 719 |
| Msa1089870 | AT4G22290.1 | 49.170 | 482 | 204 | 9 | 1 | 478 | 1 | 445 | 1.21e-146 | 427 |
Find 165 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 7_3:-3461915 | Msa1089870:CDS |
| TTCTATCTTCTTCATTCTTC+AGG | 0.199375 | 7_3:-3463693 | Msa1089870:intron |
| CTTGAAGGAGCGTTATTTAA+TGG | 0.218734 | 7_3:+3462572 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 7_3:-3462644 | Msa1089870:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 7_3:+3462710 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 7_3:-3459143 | Msa1089870:CDS |
| TGTTTCGATCTGTTGATTAA+TGG | 0.256726 | 7_3:-3458480 | Msa1089870:three_prime_UTR |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 7_3:+3461923 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 7_3:-3462269 | Msa1089870:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 7_3:+3462662 | None:intergenic |
| TTCTTTGATAAAACAATTGA+TGG | 0.320664 | 7_3:-3458745 | Msa1089870:three_prime_UTR |
| AGGAAATTCACGGATGTAAA+TGG | 0.325990 | 7_3:+3458646 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 7_3:-3462554 | Msa1089870:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 7_3:-3462290 | Msa1089870:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 7_3:-3459266 | Msa1089870:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 7_3:-3462596 | Msa1089870:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 7_3:-3459144 | Msa1089870:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 7_3:+3462320 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 7_3:+3459142 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.376875 | 7_3:-3462104 | Msa1089870:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 7_3:+3462137 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 7_3:+3462342 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 7_3:-3459242 | Msa1089870:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 7_3:+3462329 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 7_3:-3462251 | Msa1089870:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 7_3:+3462245 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 7_3:+3459143 | None:intergenic |
| GGGGACATGTCTTTATTCTC+TGG | 0.394165 | 7_3:+3459164 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 7_3:+3462052 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 7_3:-3459236 | Msa1089870:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 7_3:-3458971 | Msa1089870:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 7_3:+3462131 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 7_3:+3462701 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 7_3:-3462323 | Msa1089870:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 7_3:-3461914 | Msa1089870:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 7_3:+3462311 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 7_3:+3458852 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 7_3:-3462405 | Msa1089870:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 7_3:-3462504 | Msa1089870:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 7_3:+3462045 | None:intergenic |
| TGTAAGCATATATGTGTTGT+TGG | 0.422451 | 7_3:-3458690 | Msa1089870:three_prime_UTR |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 7_3:+3459252 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 7_3:-3462308 | Msa1089870:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 7_3:+3461945 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 7_3:-3462016 | Msa1089870:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 7_3:+3462386 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 7_3:-3462169 | Msa1089870:CDS |
| TGATGGTGGTGGTGGGTGGG+TGG | 0.447382 | 7_3:-3458728 | Msa1089870:three_prime_UTR |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 7_3:-3462250 | Msa1089870:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 7_3:-3462377 | Msa1089870:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 7_3:-3459142 | Msa1089870:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 7_3:+3462138 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 7_3:-3462536 | Msa1089870:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 7_3:-3462643 | Msa1089870:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 7_3:-3459095 | Msa1089870:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 7_3:-3458908 | Msa1089870:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 7_3:+3461524 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 7_3:+3462557 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 7_3:+3458905 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 7_3:-3462289 | Msa1089870:CDS |
| AAAACAGGTGCTGCAACAAC+TGG | 0.464653 | 7_3:+3463938 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 7_3:-3461984 | Msa1089870:CDS |
| CATTAAATAACGCTCCTTCA+AGG | 0.473559 | 7_3:-3462571 | Msa1089870:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 7_3:-3462354 | Msa1089870:CDS |
| CAATTGATGGTGGTGGTGGG+TGG | 0.479323 | 7_3:-3458732 | Msa1089870:three_prime_UTR |
| TGAGAGAAAGAGAAAGACAA+TGG | 0.479606 | 7_3:-3463759 | Msa1089870:five_prime_UTR |
| TGAGTTGAGTATGAAACAAA+AGG | 0.481992 | 7_3:+3458626 | None:intergenic |
| CTGAGTGAGTGAGTCTCTCT+AGG | 0.482847 | 7_3:-3458776 | Msa1089870:three_prime_UTR |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 7_3:-3462488 | Msa1089870:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 7_3:-3461580 | Msa1089870:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 7_3:+3462235 | None:intergenic |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 7_3:-3458972 | Msa1089870:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 7_3:+3458899 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 7_3:+3458889 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 7_3:+3462263 | None:intergenic |
| AAAACAATTGATGGTGGTGG+TGG | 0.496287 | 7_3:-3458736 | Msa1089870:three_prime_UTR |
| ATTAGCTATACAACAAACTA+AGG | 0.496458 | 7_3:+3458602 | None:intergenic |
| AATTGATGGTGGTGGTGGGT+GGG | 0.496921 | 7_3:-3458731 | Msa1089870:three_prime_UTR |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 7_3:+3458911 | None:intergenic |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 7_3:-3462442 | Msa1089870:CDS |
| ACAATACCTTCAAGGCTAGC+AGG | 0.499834 | 7_3:+3458860 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.500838 | 7_3:+3462605 | None:intergenic |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 7_3:+3459200 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 7_3:+3462686 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 7_3:-3462653 | Msa1089870:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 7_3:+3461601 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 7_3:-3459252 | Msa1089870:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 7_3:+3462154 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 7_3:-3462470 | Msa1089870:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 7_3:-3462712 | Msa1089870:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 7_3:-3462371 | Msa1089870:CDS |
| GAGAGAAAGAGAAAGACAAT+GGG | 0.524985 | 7_3:-3463758 | Msa1089870:five_prime_UTR |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 7_3:-3461936 | Msa1089870:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 7_3:-3462737 | Msa1089870:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 7_3:-3462674 | Msa1089870:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 7_3:-3462389 | Msa1089870:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 7_3:-3459228 | Msa1089870:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 7_3:+3462752 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 7_3:-3459229 | Msa1089870:CDS |
| ATGAAACAAAAGGAAATTCA+CGG | 0.533327 | 7_3:+3458636 | None:intergenic |
| ATCAGCGAAGCGAACTAGTA+CGG | 0.537951 | 7_3:-3462838 | Msa1089870:five_prime_UTR |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 7_3:-3462738 | Msa1089870:CDS |
| AATAACGCTCCTTCAAGGAC+TGG | 0.539760 | 7_3:-3462566 | Msa1089870:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 7_3:-3462276 | Msa1089870:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 7_3:+3462285 | None:intergenic |
| ATTTGAAAAGATATCAGTGA+TGG | 0.540525 | 7_3:-3462786 | Msa1089870:exon |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 7_3:-3461576 | Msa1089870:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 7_3:+3459135 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 7_3:-3462778 | Msa1089870:exon |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 7_3:-3461998 | Msa1089870:CDS |
| TAGATTTGGAACCATCCATA+GGG | 0.554139 | 7_3:+3462606 | None:intergenic |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 7_3:+3462729 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 7_3:+3461582 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 7_3:+3461516 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 7_3:+3459111 | None:intergenic |
| GAAAATGTTTGATATCCCTA+TGG | 0.559261 | 7_3:-3462621 | Msa1089870:CDS |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 7_3:-3462280 | Msa1089870:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 7_3:-3462374 | Msa1089870:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 7_3:+3462753 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 7_3:+3462191 | None:intergenic |
| ATGTTTGATATCCCTATGGA+TGG | 0.566234 | 7_3:-3462617 | Msa1089870:CDS |
| CTAGAGAGACTCACTCACTC+AGG | 0.567812 | 7_3:+3458777 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 7_3:-3461922 | Msa1089870:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 7_3:+3462714 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 7_3:+3458908 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 7_3:-3461575 | Msa1089870:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 7_3:-3462353 | Msa1089870:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 7_3:+3461642 | None:intergenic |
| AAACAATTGATGGTGGTGGT+GGG | 0.585983 | 7_3:-3458735 | Msa1089870:three_prime_UTR |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 7_3:-3462002 | Msa1089870:CDS |
| GATAAAACAATTGATGGTGG+TGG | 0.587903 | 7_3:-3458739 | Msa1089870:three_prime_UTR |
| TAGAGAGACTCACTCACTCA+GGG | 0.589043 | 7_3:+3458778 | None:intergenic |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 7_3:+3462407 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 7_3:-3458898 | Msa1089870:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 7_3:+3462655 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 7_3:-3462101 | Msa1089870:CDS |
| TTTGAAAAGATATCAGTGAT+GGG | 0.606674 | 7_3:-3462785 | Msa1089870:exon |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 7_3:-3462431 | Msa1089870:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 7_3:+3462667 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 7_3:+3462284 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 7_3:-3462752 | Msa1089870:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 7_3:-3459094 | Msa1089870:intron |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 7_3:-3459297 | Msa1089870:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 7_3:-3462412 | Msa1089870:CDS |
| TTTGATAAAACAATTGATGG+TGG | 0.633000 | 7_3:-3458742 | Msa1089870:three_prime_UTR |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 7_3:+3462323 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 7_3:+3462373 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 7_3:-3461913 | Msa1089870:intron |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 7_3:+3459144 | None:intergenic |
| CAGGTGCTGCAACAACTGGT+AGG | 0.646360 | 7_3:+3463942 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 7_3:-3462413 | Msa1089870:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 7_3:-3461950 | Msa1089870:CDS |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 7_3:-3462288 | Msa1089870:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 7_3:-3458984 | Msa1089870:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 7_3:-3458897 | Msa1089870:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 7_3:-3462671 | Msa1089870:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 7_3:-3461515 | Msa1089870:intron |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 7_3:-3462142 | Msa1089870:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 7_3:+3462060 | None:intergenic |
| TGGATTGACATCAATTACAA+CGG | 0.676526 | 7_3:+3459184 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 7_3:+3462365 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 7_3:-3462189 | Msa1089870:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 7_3:+3459145 | None:intergenic |
| AGAGAGACTCACTCACTCAG+GGG | 0.726067 | 7_3:+3458779 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 7_3:-3462411 | Msa1089870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAATTCTATATAATTAT+TGG | - | chr7_3:3459206-3459225 | Msa1089870:CDS | 10.0% |
| !!! | TATATTTTTCTTTCAAATAA+AGG | + | chr7_3:3462763-3462782 | None:intergenic | 10.0% |
| !!! | TTTTTTAACTTTTATAGTAG+TGG | - | chr7_3:3458535-3458554 | Msa1089870:three_prime_UTR | 15.0% |
| !!! | AAAAATAGATTTTTCGAAAT+GGG | + | chr7_3:3458852-3458871 | None:intergenic | 15.0% |
| !!! | AAAAAATAGATTTTTCGAAA+TGG | + | chr7_3:3458853-3458872 | None:intergenic | 15.0% |
| !! | TATATAGAATTGAAATTGAA+AGG | + | chr7_3:3459201-3459220 | None:intergenic | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | - | chr7_3:3462484-3462503 | Msa1089870:CDS | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | - | chr7_3:3462692-3462711 | Msa1089870:CDS | 15.0% |
| !!! | ATTTATCAGATTATGACTTT+TGG | - | chr7_3:3458883-3458902 | Msa1089870:CDS | 20.0% |
| !!! | TTTATCAGATTATGACTTTT+GGG | - | chr7_3:3458884-3458903 | Msa1089870:CDS | 20.0% |
| !! | ACTCAATAATGATATATGAA+TGG | - | chr7_3:3458966-3458985 | Msa1089870:CDS | 20.0% |
| !!! | CTATCTAACTAATTTTACTT+TGG | - | chr7_3:3459059-3459078 | Msa1089870:intron | 20.0% |
| !! | TAAAAACAAAAACTATGTAG+TGG | + | chr7_3:3459167-3459186 | None:intergenic | 20.0% |
| !!! | GTAATTAGTTTATCTTATCT+TGG | - | chr7_3:3459315-3459334 | Msa1089870:intron | 20.0% |
| !! | AATTATCATAATAACAATGC+TGG | + | chr7_3:3459365-3459384 | None:intergenic | 20.0% |
| !!! | ATTCTGTTTCAATCTTTTTT+AGG | - | chr7_3:3459517-3459536 | Msa1089870:intron | 20.0% |
| !! | AAAGAATTACTACAACAATA+AGG | + | chr7_3:3460370-3460389 | None:intergenic | 20.0% |
| !! | CAAAAGTTACAATATATCAA+TGG | + | chr7_3:3460740-3460759 | None:intergenic | 20.0% |
| !!! | TGATATATTGTAACTTTTGA+AGG | - | chr7_3:3460741-3460760 | Msa1089870:intron | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | + | chr7_3:3461012-3461031 | None:intergenic | 20.0% |
| !! | TATTGAATGAACCTAAAAAA+TGG | - | chr7_3:3461269-3461288 | Msa1089870:intron | 20.0% |
| !!! | TAAGCAAAAATCCATTTTTT+AGG | + | chr7_3:3461283-3461302 | None:intergenic | 20.0% |
| !! | TCTAACTTATACAATGAATT+TGG | - | chr7_3:3461327-3461346 | Msa1089870:intron | 20.0% |
| !! | CTAACTTATACAATGAATTT+GGG | - | chr7_3:3461328-3461347 | Msa1089870:intron | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | - | chr7_3:3461431-3461450 | Msa1089870:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | - | chr7_3:3461432-3461451 | Msa1089870:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | + | chr7_3:3462045-3462064 | None:intergenic | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | - | chr7_3:3462494-3462513 | Msa1089870:CDS | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | + | chr7_3:3462551-3462570 | None:intergenic | 20.0% |
| !!! | ATCATTATTTCTTTCTTGTT+TGG | - | chr7_3:3462638-3462657 | Msa1089870:CDS | 20.0% |
| !!! | TCATTATTTCTTTCTTGTTT+GGG | - | chr7_3:3462639-3462658 | Msa1089870:CDS | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | + | chr7_3:3462684-3462703 | None:intergenic | 20.0% |
| !!! | AGAATGCAAATTGTATATTT+TGG | - | chr7_3:3463034-3463053 | Msa1089870:intron | 20.0% |
| !!! | GAATGCAAATTGTATATTTT+GGG | - | chr7_3:3463035-3463054 | Msa1089870:intron | 20.0% |
| !!! | AATGCAAATTGTATATTTTG+GGG | - | chr7_3:3463036-3463055 | Msa1089870:intron | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | + | chr7_3:3463108-3463127 | None:intergenic | 20.0% |
| !! | TTCTTTGATAAAACAATTGA+TGG | - | chr7_3:3463667-3463686 | Msa1089870:intron | 20.0% |
| !!! | AGAATTTCAAACTTTTTGAA+TGG | - | chr7_3:3463862-3463881 | Msa1089870:intron | 20.0% |
| ! | TAGAATAGAATCAAAAAGAG+TGG | + | chr7_3:3458704-3458723 | None:intergenic | 25.0% |
| !! | TTATCAGATTATGACTTTTG+GGG | - | chr7_3:3458885-3458904 | Msa1089870:CDS | 25.0% |
| ! | TTGCACATTGTAATAAAACT+TGG | - | chr7_3:3458916-3458935 | Msa1089870:CDS | 25.0% |
| ! | TGCACATTGTAATAAAACTT+GGG | - | chr7_3:3458917-3458936 | Msa1089870:CDS | 25.0% |
| !! | CTAACTAATTTTACTTTGGA+TGG | - | chr7_3:3459063-3459082 | Msa1089870:intron | 25.0% |
| !! | TAATTTTACTTTGGATGGTA+AGG | - | chr7_3:3459068-3459087 | Msa1089870:intron | 25.0% |
| ! | GTAAAGTAAGAATGAAGAAA+AGG | + | chr7_3:3459114-3459133 | None:intergenic | 25.0% |
| ! | GAAAGGGTAAATTAAAATGA+TGG | + | chr7_3:3459136-3459155 | None:intergenic | 25.0% |
| ! | TTCATCATAGTTATAGTCTA+AGG | - | chr7_3:3459413-3459432 | Msa1089870:intron | 25.0% |
| ! | ATTTGAAAAGATATCAGTGA+TGG | - | chr7_3:3459626-3459645 | Msa1089870:intron | 25.0% |
| ! | TTTGAAAAGATATCAGTGAT+GGG | - | chr7_3:3459627-3459646 | Msa1089870:intron | 25.0% |
| ! | TTCAAAACATGAATGATTGA+TGG | - | chr7_3:3460707-3460726 | Msa1089870:intron | 25.0% |
| !!! | TATATTGTAACTTTTGAAGG+TGG | - | chr7_3:3460744-3460763 | Msa1089870:intron | 25.0% |
| ! | TGTCGAATTCAAATAAAACT+TGG | + | chr7_3:3460960-3460979 | None:intergenic | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | + | chr7_3:3461101-3461120 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | - | chr7_3:3461150-3461169 | Msa1089870:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr7_3:3461293-3461312 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr7_3:3461219-3461238 | Msa1089870:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr7_3:3461293-3461312 | Msa1089870:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | - | chr7_3:3461398-3461417 | Msa1089870:intron | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | - | chr7_3:3461399-3461418 | Msa1089870:intron | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | + | chr7_3:3461481-3461500 | None:intergenic | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | - | chr7_3:3461582-3461601 | Msa1089870:CDS | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | - | chr7_3:3461583-3461602 | Msa1089870:CDS | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | + | chr7_3:3461963-3461982 | None:intergenic | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | + | chr7_3:3461964-3461983 | None:intergenic | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | + | chr7_3:3461988-3462007 | None:intergenic | 25.0% |
| !! | AATTTTTCTTCATTTTGTGC+CGG | + | chr7_3:3462162-3462181 | None:intergenic | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | + | chr7_3:3462234-3462253 | None:intergenic | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | - | chr7_3:3462231-3462250 | Msa1089870:CDS | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | - | chr7_3:3462793-3462812 | Msa1089870:five_prime_UTR | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | - | chr7_3:3462971-3462990 | Msa1089870:intron | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | + | chr7_3:3462975-3462994 | None:intergenic | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | - | chr7_3:3462993-3463012 | Msa1089870:intron | 25.0% |
| ! | TACAATTTGCATTCTGATAT+AGG | + | chr7_3:3463029-3463048 | None:intergenic | 25.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | - | chr7_3:3463385-3463404 | Msa1089870:intron | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | - | chr7_3:3463420-3463439 | Msa1089870:intron | 25.0% |
| ! | TTTGATAAAACAATTGATGG+TGG | - | chr7_3:3463670-3463689 | Msa1089870:intron | 25.0% |
| ! | ATGAAACAAAAGGAAATTCA+CGG | + | chr7_3:3463779-3463798 | None:intergenic | 25.0% |
| ! | ATTAGCTATACAACAAACTA+AGG | + | chr7_3:3463813-3463832 | None:intergenic | 25.0% |
| !! | CAAAAAGTTTGAAATTCTCA+AGG | + | chr7_3:3463860-3463879 | None:intergenic | 25.0% |
| TCTCTCTCTCTTAAAAAAAC+AGG | + | chr7_3:3458492-3458511 | None:intergenic | 30.0% | |
| TTCTATCTTCTTCATTCTTC+AGG | - | chr7_3:3458719-3458738 | Msa1089870:three_prime_UTR | 30.0% | |
| TTGCATTCATACTCTTCAAA+TGG | - | chr7_3:3458820-3458839 | Msa1089870:CDS | 30.0% | |
| TGCATTCATACTCTTCAAAT+GGG | - | chr7_3:3458821-3458840 | Msa1089870:CDS | 30.0% | |
| AGAGAAATTTGGAAGTGAAA+TGG | + | chr7_3:3459024-3459043 | None:intergenic | 30.0% | |
| ATCTAGAGGAAAGAGAAATT+TGG | + | chr7_3:3459035-3459054 | None:intergenic | 30.0% | |
| AGTTAGATAGATAGATCTAG+AGG | + | chr7_3:3459049-3459068 | None:intergenic | 30.0% | |
| TGTAGTGGTGTTTAAAGAAA+GGG | + | chr7_3:3459152-3459171 | None:intergenic | 30.0% | |
| ATGTAGTGGTGTTTAAAGAA+AGG | + | chr7_3:3459153-3459172 | None:intergenic | 30.0% | |
| ! | AATAACAATGCTGGATTTTC+TGG | + | chr7_3:3459356-3459375 | None:intergenic | 30.0% |
| !!! | CTGTTTCAATCTTTTTTAGG+TGG | - | chr7_3:3459520-3459539 | Msa1089870:intron | 30.0% |
| GAAAATGTTTGATATCCCTA+TGG | - | chr7_3:3459791-3459810 | Msa1089870:intron | 30.0% | |
| ! | ATTTGATTTCATTGACCCTA+AGG | + | chr7_3:3460180-3460199 | None:intergenic | 30.0% |
| ! | TGTGATTCTGATTTTCGTTA+TGG | - | chr7_3:3460295-3460314 | Msa1089870:intron | 30.0% |
| ! | GTGATTCTGATTTTCGTTAT+GGG | - | chr7_3:3460296-3460315 | Msa1089870:intron | 30.0% |
| TACTACAACAATAAGGAGTA+TGG | + | chr7_3:3460363-3460382 | None:intergenic | 30.0% | |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | - | chr7_3:3460376-3460395 | Msa1089870:intron | 30.0% |
| AAATACAGTCAAACAATGTG+TGG | + | chr7_3:3460613-3460632 | None:intergenic | 30.0% | |
| ! | GTATTTTTCTCATTCATCCA+TGG | - | chr7_3:3460627-3460646 | Msa1089870:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | + | chr7_3:3460800-3460819 | None:intergenic | 30.0% |
| TCTATATTCATACAAGCTAG+TGG | + | chr7_3:3460833-3460852 | None:intergenic | 30.0% | |
| ! | ACTAGCTTGTATGAATATAG+AGG | - | chr7_3:3460832-3460851 | Msa1089870:intron | 30.0% |
| CTTGTATGAATATAGAGGAT+GGG | - | chr7_3:3460837-3460856 | Msa1089870:intron | 30.0% | |
| !! | TGTAATTTGCTTATGTGAAC+TGG | - | chr7_3:3461047-3461066 | Msa1089870:intron | 30.0% |
| ACTGGTAAGAGATAATCAAA+AGG | - | chr7_3:3461065-3461084 | Msa1089870:intron | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | - | chr7_3:3461066-3461085 | Msa1089870:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | + | chr7_3:3461354-3461373 | None:intergenic | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | + | chr7_3:3461482-3461501 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | - | chr7_3:3461479-3461498 | Msa1089870:intron | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | - | chr7_3:3461482-3461501 | Msa1089870:intron | 30.0% | |
| ! | ATGGACAATGTATCTAGAAT+AGG | - | chr7_3:3461549-3461568 | Msa1089870:CDS | 30.0% |
| TCTTACAAACCAACTTTGTA+GGG | + | chr7_3:3461625-3461644 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | + | chr7_3:3461626-3461645 | None:intergenic | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | + | chr7_3:3461657-3461676 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | + | chr7_3:3461658-3461677 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | - | chr7_3:3461658-3461677 | Msa1089870:intron | 30.0% | |
| !! | TCTTCTTTAGGGCTAATAAT+GGG | + | chr7_3:3461952-3461971 | None:intergenic | 30.0% |
| !! | TTCTTCTTTAGGGCTAATAA+TGG | + | chr7_3:3461953-3461972 | None:intergenic | 30.0% |
| ATGCAACTTATAAATGGTAG+AGG | + | chr7_3:3462039-3462058 | None:intergenic | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | - | chr7_3:3462056-3462075 | Msa1089870:CDS | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | + | chr7_3:3462077-3462096 | None:intergenic | 30.0% | |
| TTTCTTTCAATCTACAGTGA+GGG | + | chr7_3:3462100-3462119 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | - | chr7_3:3462287-3462306 | Msa1089870:CDS | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | - | chr7_3:3462316-3462335 | Msa1089870:CDS | 30.0% |
| ! | TTAGTTACTTAAGCTTTGGT+GGG | - | chr7_3:3462364-3462383 | Msa1089870:CDS | 30.0% |
| TAAAGGCTAGATAGAAACTA+GGG | + | chr7_3:3462746-3462765 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | + | chr7_3:3462747-3462766 | None:intergenic | 30.0% | |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | - | chr7_3:3462846-3462865 | Msa1089870:five_prime_UTR | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | - | chr7_3:3462847-3462866 | Msa1089870:five_prime_UTR | 30.0% |
| ATCAAGAATAGTCCCTTATT+AGG | - | chr7_3:3462905-3462924 | Msa1089870:intron | 30.0% | |
| GAAGACATACTACCTAATAA+GGG | + | chr7_3:3462920-3462939 | None:intergenic | 30.0% | |
| TGAAGACATACTACCTAATA+AGG | + | chr7_3:3462921-3462940 | None:intergenic | 30.0% | |
| !! | ATTGTATATTTTGGGGACTT+TGG | - | chr7_3:3463043-3463062 | Msa1089870:intron | 30.0% |
| TGGATTGACATCAATTACAA+CGG | + | chr7_3:3463231-3463250 | None:intergenic | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | - | chr7_3:3463318-3463337 | Msa1089870:intron | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | + | chr7_3:3463563-3463582 | None:intergenic | 30.0% | |
| GGATAAAAAGATAACTACAC+TGG | + | chr7_3:3463615-3463634 | None:intergenic | 30.0% | |
| TGTAAGCATATATGTGTTGT+TGG | - | chr7_3:3463722-3463741 | Msa1089870:five_prime_UTR | 30.0% | |
| ! | TGAGTTGAGTATGAAACAAA+AGG | + | chr7_3:3463789-3463808 | None:intergenic | 30.0% |
| ! | TGTTTCGATCTGTTGATTAA+TGG | - | chr7_3:3463932-3463951 | Msa1089870:five_prime_UTR | 30.0% |
| AGAGAGAGAGAAGAAAAAAG+AGG | - | chr7_3:3458599-3458618 | Msa1089870:three_prime_UTR | 35.0% | |
| TGAGAGAAAGAGAAAGACAA+TGG | - | chr7_3:3458653-3458672 | Msa1089870:three_prime_UTR | 35.0% | |
| GAGAGAAAGAGAAAGACAAT+GGG | - | chr7_3:3458654-3458673 | Msa1089870:three_prime_UTR | 35.0% | |
| AGCGAAGATCTGAGAAAAAT+GGG | + | chr7_3:3458798-3458817 | None:intergenic | 35.0% | |
| GCATTCATACTCTTCAAATG+GGG | - | chr7_3:3458822-3458841 | Msa1089870:CDS | 35.0% | |
| CATTCATACTCTTCAAATGG+GGG | - | chr7_3:3458823-3458842 | Msa1089870:CDS | 35.0% | |
| ! | CGCAACATGTTTACATTTTG+AGG | - | chr7_3:3458993-3459012 | Msa1089870:intron | 35.0% |
| !! | TTTTAGGTGGCATTGTTTTG+CGG | - | chr7_3:3459533-3459552 | Msa1089870:intron | 35.0% |
| ATTGTTGGAGTCCTTTCTTT+CGG | + | chr7_3:3459714-3459733 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | - | chr7_3:3459768-3459787 | Msa1089870:intron | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | - | chr7_3:3459769-3459788 | Msa1089870:intron | 35.0% | |
| ATGTTTGATATCCCTATGGA+TGG | - | chr7_3:3459795-3459814 | Msa1089870:intron | 35.0% | |
| ! | TAGATTTGGAACCATCCATA+GGG | + | chr7_3:3459809-3459828 | None:intergenic | 35.0% |
| GGTTCCAAATCTAGAAAATC+TGG | - | chr7_3:3459816-3459835 | Msa1089870:intron | 35.0% | |
| ! | TGGACCAGATTTTCTAGATT+TGG | + | chr7_3:3459823-3459842 | None:intergenic | 35.0% |
| !! | CTTGAAGGAGCGTTATTTAA+TGG | + | chr7_3:3459843-3459862 | None:intergenic | 35.0% |
| CATTAAATAACGCTCCTTCA+AGG | - | chr7_3:3459841-3459860 | Msa1089870:intron | 35.0% | |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | + | chr7_3:3459982-3460001 | None:intergenic | 35.0% |
| TCAATGAAAAGGACAAACTC+AGG | - | chr7_3:3459981-3460000 | Msa1089870:intron | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | + | chr7_3:3460104-3460123 | None:intergenic | 35.0% | |
| !! | ACAACTGGTTTGATTACATC+TGG | - | chr7_3:3460104-3460123 | Msa1089870:intron | 35.0% |
| TGGATGATGAATATTCCTTC+AGG | - | chr7_3:3460243-3460262 | Msa1089870:intron | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | + | chr7_3:3460284-3460303 | None:intergenic | 35.0% | |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | - | chr7_3:3460323-3460342 | Msa1089870:intron | 35.0% |
| CCACTTTATGAACTAATCCA+TGG | + | chr7_3:3460647-3460666 | None:intergenic | 35.0% | |
| !! | CCATGGATTAGTTCATAAAG+TGG | - | chr7_3:3460644-3460663 | Msa1089870:intron | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | + | chr7_3:3460787-3460806 | None:intergenic | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | + | chr7_3:3460797-3460816 | None:intergenic | 35.0% |
| GTGGATGTATATACACATCT+TGG | + | chr7_3:3460814-3460833 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | - | chr7_3:3460836-3460855 | Msa1089870:intron | 35.0% | |
| AAGTTAGATTATACACCCTC+CGG | + | chr7_3:3461315-3461334 | None:intergenic | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | - | chr7_3:3461345-3461364 | Msa1089870:intron | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | + | chr7_3:3461588-3461607 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | + | chr7_3:3461662-3461681 | None:intergenic | 35.0% | |
| ! | CCAACACTTTCATTGTTGTT+GGG | + | chr7_3:3461715-3461734 | None:intergenic | 35.0% |
| TCCAACACTTTCATTGTTGT+TGG | + | chr7_3:3461716-3461735 | None:intergenic | 35.0% | |
| !! | AACAACAATGAAAGTGTTGG+AGG | - | chr7_3:3461715-3461734 | Msa1089870:intron | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | + | chr7_3:3461881-3461900 | None:intergenic | 35.0% |
| TGACATAGCAAACATCAGAA+TGG | - | chr7_3:3461887-3461906 | Msa1089870:intron | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | - | chr7_3:3461891-3461910 | Msa1089870:intron | 35.0% | |
| GTTTCTTTCAATCTACAGTG+AGG | + | chr7_3:3462101-3462120 | None:intergenic | 35.0% | |
| ! | TACACGTTCAACCAATTTTC+CGG | - | chr7_3:3462140-3462159 | Msa1089870:CDS | 35.0% |
| ! | TTCATTTTGTGCCGGAAAAT+TGG | + | chr7_3:3462154-3462173 | None:intergenic | 35.0% |
| CATATAAGCATCTTCTAACG+TGG | - | chr7_3:3462206-3462225 | Msa1089870:CDS | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | + | chr7_3:3462288-3462307 | None:intergenic | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | - | chr7_3:3462286-3462305 | Msa1089870:CDS | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | - | chr7_3:3462329-3462348 | Msa1089870:CDS | 35.0% |
| !! | TGGGTTAGTTACTTAAGCTT+TGG | - | chr7_3:3462360-3462379 | Msa1089870:CDS | 35.0% |
| ! | GTTAGTTACTTAAGCTTTGG+TGG | - | chr7_3:3462363-3462382 | Msa1089870:CDS | 35.0% |
| ! | TAGTTACTTAAGCTTTGGTG+GGG | - | chr7_3:3462365-3462384 | Msa1089870:CDS | 35.0% |
| TCATCTTCGATGAAAGTTCT+TGG | + | chr7_3:3462409-3462428 | None:intergenic | 35.0% | |
| AACTTTCATCGAAGATGAGA+TGG | - | chr7_3:3462411-3462430 | Msa1089870:CDS | 35.0% | |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | + | chr7_3:3462540-3462559 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | - | chr7_3:3462848-3462867 | Msa1089870:five_prime_UTR | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | - | chr7_3:3462849-3462868 | Msa1089870:five_prime_UTR | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | - | chr7_3:3462860-3462879 | Msa1089870:five_prime_UTR | 35.0% |
| TGTCTTCATGTCTGATGTTA+TGG | - | chr7_3:3462933-3462952 | Msa1089870:intron | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | - | chr7_3:3463115-3463134 | Msa1089870:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | + | chr7_3:3463304-3463323 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | - | chr7_3:3463317-3463336 | Msa1089870:intron | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | - | chr7_3:3463388-3463407 | Msa1089870:intron | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | - | chr7_3:3463428-3463447 | Msa1089870:intron | 35.0% | |
| !! | GATAAAACAATTGATGGTGG+TGG | - | chr7_3:3463673-3463692 | Msa1089870:intron | 35.0% |
| AGGAAATTCACGGATGTAAA+TGG | + | chr7_3:3463769-3463788 | None:intergenic | 35.0% | |
| AGAATCAAAAAGAGTGGCGA+TGG | + | chr7_3:3458698-3458717 | None:intergenic | 40.0% | |
| GAGCGAAGATCTGAGAAAAA+TGG | + | chr7_3:3458799-3458818 | None:intergenic | 40.0% | |
| !! | CTGGATTTTCTGGTACATGA+TGG | + | chr7_3:3459346-3459365 | None:intergenic | 40.0% |
| CATTGCTTAGCTGATGAGAT+GGG | + | chr7_3:3459662-3459681 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | - | chr7_3:3459674-3459693 | Msa1089870:intron | 40.0% | |
| ! | CTAGATTTGGAACCATCCAT+AGG | + | chr7_3:3459810-3459829 | None:intergenic | 40.0% |
| CTACTTCAGCCTCAATGAAA+AGG | - | chr7_3:3459970-3459989 | Msa1089870:intron | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | - | chr7_3:3459999-3460018 | Msa1089870:intron | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | + | chr7_3:3460095-3460114 | None:intergenic | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | + | chr7_3:3460170-3460189 | None:intergenic | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | - | chr7_3:3460270-3460289 | Msa1089870:intron | 40.0% | |
| !! | CAGACCACAATATTGGCTTT+GGG | + | chr7_3:3460277-3460296 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | + | chr7_3:3460278-3460297 | None:intergenic | 40.0% |
| TTCGTTATGGGATTCATTGC+TGG | - | chr7_3:3460308-3460327 | Msa1089870:intron | 40.0% | |
| ! | CAATAAGGAGTATGGCATTG+CGG | + | chr7_3:3460355-3460374 | None:intergenic | 40.0% |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | - | chr7_3:3460379-3460398 | Msa1089870:intron | 40.0% |
| TTCACTTGGAATAGTTGTCG+TGG | - | chr7_3:3460410-3460429 | Msa1089870:intron | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | + | chr7_3:3460492-3460511 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | - | chr7_3:3460490-3460509 | Msa1089870:intron | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | - | chr7_3:3460498-3460517 | Msa1089870:intron | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | - | chr7_3:3460499-3460518 | Msa1089870:intron | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | + | chr7_3:3460587-3460606 | None:intergenic | 40.0% | |
| AAACAATGTGTGGCAAGTGT+TGG | + | chr7_3:3460603-3460622 | None:intergenic | 40.0% | |
| !! | TAAACATCGCCGTTTTACCT+GGG | - | chr7_3:3460879-3460898 | Msa1089870:intron | 40.0% |
| TGCGACTGCTTGAAATACTT+TGG | - | chr7_3:3460986-3461005 | Msa1089870:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | - | chr7_3:3460992-3461011 | Msa1089870:intron | 40.0% | |
| ! | GAGGGTGTACCATGTAATTA+GGG | + | chr7_3:3461162-3461181 | None:intergenic | 40.0% |
| TAATTACATGGTACACCCTC+CGG | - | chr7_3:3461162-3461181 | Msa1089870:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | + | chr7_3:3461297-3461316 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr7_3:3461296-3461315 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr7_3:3461296-3461315 | Msa1089870:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr7_3:3461297-3461316 | Msa1089870:intron | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | + | chr7_3:3461495-3461514 | None:intergenic | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | + | chr7_3:3461544-3461563 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | + | chr7_3:3461615-3461634 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | - | chr7_3:3461613-3461632 | Msa1089870:CDS | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | - | chr7_3:3461671-3461690 | Msa1089870:intron | 40.0% | |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | + | chr7_3:3461708-3461727 | None:intergenic | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | - | chr7_3:3461712-3461731 | Msa1089870:intron | 40.0% |
| TATCTGCACTATGTCGTAGT+GGG | + | chr7_3:3461843-3461862 | None:intergenic | 40.0% | |
| ATATCTGCACTATGTCGTAG+TGG | + | chr7_3:3461844-3461863 | None:intergenic | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | + | chr7_3:3462027-3462046 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | + | chr7_3:3462028-3462047 | None:intergenic | 40.0% | |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | - | chr7_3:3462306-3462325 | Msa1089870:CDS | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | - | chr7_3:3462328-3462347 | Msa1089870:CDS | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | - | chr7_3:3462330-3462349 | Msa1089870:CDS | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | - | chr7_3:3462331-3462350 | Msa1089870:CDS | 40.0% |
| ATGAAACAAGGGGGGATATT+TGG | - | chr7_3:3462340-3462359 | Msa1089870:CDS | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | - | chr7_3:3462341-3462360 | Msa1089870:CDS | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | + | chr7_3:3462608-3462627 | None:intergenic | 40.0% | |
| ! | CCATCATAGTCATCGACTAT+TGG | - | chr7_3:3462605-3462624 | Msa1089870:CDS | 40.0% |
| GATGATGTTATGGTGCAACA+AGG | + | chr7_3:3462674-3462693 | None:intergenic | 40.0% | |
| !! | TATATTTTGGGGACTTTGGC+AGG | - | chr7_3:3463047-3463066 | Msa1089870:intron | 40.0% |
| TACATCTCTGACTTCCAATC+TGG | - | chr7_3:3463146-3463165 | Msa1089870:intron | 40.0% | |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | + | chr7_3:3463172-3463191 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | - | chr7_3:3463170-3463189 | Msa1089870:intron | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | - | chr7_3:3463176-3463195 | Msa1089870:intron | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | - | chr7_3:3463183-3463202 | Msa1089870:intron | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | - | chr7_3:3463184-3463203 | Msa1089870:intron | 40.0% |
| ACAACGGAATCGTCAACATA+AGG | + | chr7_3:3463215-3463234 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | + | chr7_3:3463533-3463552 | None:intergenic | 40.0% | |
| !!! | ATTTTTCCTGCTAGCCTTGA+AGG | - | chr7_3:3463546-3463565 | Msa1089870:intron | 40.0% |
| !! | AAAACAATTGATGGTGGTGG+TGG | - | chr7_3:3463676-3463695 | Msa1089870:intron | 40.0% |
| !! | AAACAATTGATGGTGGTGGT+GGG | - | chr7_3:3463677-3463696 | Msa1089870:intron | 40.0% |
| ! | AAAACAGGTGCTGCAACAAC+TGG | + | chr7_3:3458477-3458496 | None:intergenic | 45.0% |
| ATCAGCGAAGCGAACTAGTA+CGG | - | chr7_3:3459574-3459593 | Msa1089870:intron | 45.0% | |
| !! | AGATATCAGTGATGGGTTCG+AGG | - | chr7_3:3459634-3459653 | Msa1089870:intron | 45.0% |
| CCATTGCTTAGCTGATGAGA+TGG | + | chr7_3:3459663-3459682 | None:intergenic | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | - | chr7_3:3459660-3459679 | Msa1089870:intron | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | - | chr7_3:3459675-3459694 | Msa1089870:intron | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | + | chr7_3:3459701-3459720 | None:intergenic | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | + | chr7_3:3459729-3459748 | None:intergenic | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | - | chr7_3:3459738-3459757 | Msa1089870:intron | 45.0% | |
| AATAACGCTCCTTCAAGGAC+TGG | - | chr7_3:3459846-3459865 | Msa1089870:intron | 45.0% | |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | + | chr7_3:3459903-3459922 | None:intergenic | 45.0% |
| TCAGGTAATCTATCTGCTGC+AGG | - | chr7_3:3459942-3459961 | Msa1089870:intron | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | - | chr7_3:3460000-3460019 | Msa1089870:intron | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | - | chr7_3:3460001-3460020 | Msa1089870:intron | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | + | chr7_3:3460008-3460027 | None:intergenic | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | - | chr7_3:3460007-3460026 | Msa1089870:intron | 45.0% | |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | + | chr7_3:3460086-3460105 | None:intergenic | 45.0% |
| AATGGACCAGAAACCTTCCT+TGG | + | chr7_3:3460152-3460171 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | - | chr7_3:3460161-3460180 | Msa1089870:intron | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | - | chr7_3:3460162-3460181 | Msa1089870:intron | 45.0% | |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | + | chr7_3:3460261-3460280 | None:intergenic | 45.0% |
| GTTATGGGATTCATTGCTGG+AGG | - | chr7_3:3460311-3460330 | Msa1089870:intron | 45.0% | |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | - | chr7_3:3460382-3460401 | Msa1089870:intron | 45.0% |
| CTTGGAATAGTTGTCGTGGA+AGG | - | chr7_3:3460414-3460433 | Msa1089870:intron | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | - | chr7_3:3460428-3460447 | Msa1089870:intron | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | - | chr7_3:3460462-3460481 | Msa1089870:intron | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | - | chr7_3:3460497-3460516 | Msa1089870:intron | 45.0% | |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | - | chr7_3:3460754-3460773 | Msa1089870:intron | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | - | chr7_3:3460878-3460897 | Msa1089870:intron | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | - | chr7_3:3460880-3460899 | Msa1089870:intron | 45.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | + | chr7_3:3460891-3460910 | None:intergenic | 45.0% | |
| ! | GGAGGGTGTACCATGTAATT+AGG | + | chr7_3:3461163-3461182 | None:intergenic | 45.0% |
| GCCATATCTCTAGGCAATGT+GGG | - | chr7_3:3461680-3461699 | Msa1089870:intron | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | + | chr7_3:3461684-3461703 | None:intergenic | 45.0% | |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | + | chr7_3:3461707-3461726 | None:intergenic | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | + | chr7_3:3461709-3461728 | None:intergenic | 45.0% |
| TTAGCTGATCCCACTTGTGT+TGG | + | chr7_3:3462299-3462318 | None:intergenic | 45.0% | |
| ! | GTAAAGGCATGAAACAAGGG+GGG | - | chr7_3:3462332-3462351 | Msa1089870:CDS | 45.0% |
| TCATCGAAGATGAGATGGAG+TGG | - | chr7_3:3462416-3462435 | Msa1089870:CDS | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | - | chr7_3:3462863-3462882 | Msa1089870:five_prime_UTR | 45.0% | |
| GGGGACATGTCTTTATTCTC+TGG | + | chr7_3:3463251-3463270 | None:intergenic | 45.0% | |
| !! | GGCGGCTATGATGTTTTTGT+AGG | - | chr7_3:3463406-3463425 | Msa1089870:intron | 45.0% |
| ACAATACCTTCAAGGCTAGC+AGG | + | chr7_3:3463555-3463574 | None:intergenic | 45.0% | |
| TAGAGAGACTCACTCACTCA+GGG | + | chr7_3:3463637-3463656 | None:intergenic | 45.0% | |
| !! | TTAAATTAAAACTATTAATA+TGG | - | chr7_3:3462562-3462581 | Msa1089870:CDS | 5.0% |
| GTCCTGAACAGCCGAAAGAA+AGG | - | chr7_3:3459700-3459719 | Msa1089870:intron | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | + | chr7_3:3459705-3459724 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | + | chr7_3:3459753-3459772 | None:intergenic | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | + | chr7_3:3459760-3459779 | None:intergenic | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | + | chr7_3:3459858-3459877 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | - | chr7_3:3459858-3459877 | Msa1089870:intron | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | - | chr7_3:3459924-3459943 | Msa1089870:intron | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | - | chr7_3:3460023-3460042 | Msa1089870:intron | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | + | chr7_3:3460029-3460048 | None:intergenic | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | - | chr7_3:3460035-3460054 | Msa1089870:intron | 50.0% | |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | + | chr7_3:3460073-3460092 | None:intergenic | 50.0% |
| CCAGTTGTTGGAAGAACTGG+AGG | + | chr7_3:3460092-3460111 | None:intergenic | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | - | chr7_3:3460089-3460108 | Msa1089870:intron | 50.0% | |
| ! | TGAATTCATCTGGGGCTCCA+AGG | - | chr7_3:3460132-3460151 | Msa1089870:intron | 50.0% |
| ACACTGAGAGTAGTCACAGC+TGG | + | chr7_3:3460224-3460243 | None:intergenic | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | - | chr7_3:3460223-3460242 | Msa1089870:intron | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | + | chr7_3:3460773-3460792 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | - | chr7_3:3461679-3461698 | Msa1089870:intron | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | - | chr7_3:3461910-3461929 | Msa1089870:intron | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | - | chr7_3:3461924-3461943 | Msa1089870:CDS | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | - | chr7_3:3462425-3462444 | Msa1089870:CDS | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | - | chr7_3:3462426-3462445 | Msa1089870:CDS | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | + | chr7_3:3463270-3463289 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | + | chr7_3:3463271-3463290 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | + | chr7_3:3463272-3463291 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | - | chr7_3:3463269-3463288 | Msa1089870:intron | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | + | chr7_3:3463273-3463292 | None:intergenic | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | - | chr7_3:3463270-3463289 | Msa1089870:intron | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | + | chr7_3:3463280-3463299 | None:intergenic | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | - | chr7_3:3463440-3463459 | Msa1089870:intron | 50.0% | |
| AGAGAGACTCACTCACTCAG+GGG | + | chr7_3:3463636-3463655 | None:intergenic | 50.0% | |
| CTAGAGAGACTCACTCACTC+AGG | + | chr7_3:3463638-3463657 | None:intergenic | 50.0% | |
| CTGAGTGAGTGAGTCTCTCT+AGG | - | chr7_3:3463636-3463655 | Msa1089870:intron | 50.0% | |
| !! | AATTGATGGTGGTGGTGGGT+GGG | - | chr7_3:3463681-3463700 | Msa1089870:intron | 50.0% |
| ! | CAGGTGCTGCAACAACTGGT+AGG | + | chr7_3:3458473-3458492 | None:intergenic | 55.0% |
| GTTGCCATGCCTTATACCGG+CGG | - | chr7_3:3459741-3459760 | Msa1089870:intron | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | - | chr7_3:3459759-3459778 | Msa1089870:intron | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | - | chr7_3:3459908-3459927 | Msa1089870:intron | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | - | chr7_3:3460038-3460057 | Msa1089870:intron | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | + | chr7_3:3460042-3460061 | None:intergenic | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | - | chr7_3:3460041-3460060 | Msa1089870:intron | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | - | chr7_3:3460058-3460077 | Msa1089870:intron | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | - | chr7_3:3460122-3460141 | Msa1089870:intron | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | - | chr7_3:3460123-3460142 | Msa1089870:intron | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | - | chr7_3:3460124-3460143 | Msa1089870:intron | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | + | chr7_3:3460130-3460149 | None:intergenic | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | + | chr7_3:3460131-3460150 | None:intergenic | 55.0% | |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | - | chr7_3:3460136-3460155 | Msa1089870:intron | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | - | chr7_3:3460396-3460415 | Msa1089870:intron | 55.0% |
| GAGCTGAGGACAGCCAAGAA+TGG | - | chr7_3:3460476-3460495 | Msa1089870:intron | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | + | chr7_3:3460899-3460918 | None:intergenic | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | - | chr7_3:3460897-3460916 | Msa1089870:intron | 55.0% | |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | + | chr7_3:3461518-3461537 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | + | chr7_3:3461519-3461538 | None:intergenic | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | + | chr7_3:3461520-3461539 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | + | chr7_3:3461521-3461540 | None:intergenic | 55.0% |
| CCCTCATGACCAAACCCGAT+GGG | - | chr7_3:3461518-3461537 | Msa1089870:CDS | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | - | chr7_3:3461727-3461746 | Msa1089870:intron | 55.0% |
| CAACGAAGGCAGCTCAAGTG+TGG | - | chr7_3:3461741-3461760 | Msa1089870:intron | 55.0% | |
| ! | GGCACCAGATTCGAGTTTCC+TGG | + | chr7_3:3461931-3461950 | None:intergenic | 55.0% |
| ! | AAGCTTTGGTGGGGTCAGAC+TGG | - | chr7_3:3462374-3462393 | Msa1089870:CDS | 55.0% |
| GAGATGGAGTGGTTGCAGAG+GGG | - | chr7_3:3462427-3462446 | Msa1089870:CDS | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | + | chr7_3:3463163-3463182 | None:intergenic | 55.0% | |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | - | chr7_3:3463160-3463179 | Msa1089870:intron | 55.0% |
| TGTCCCCCGATTTCCTTCGA+TGG | - | chr7_3:3463264-3463283 | Msa1089870:intron | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | - | chr7_3:3463268-3463287 | Msa1089870:intron | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | - | chr7_3:3463515-3463534 | Msa1089870:intron | 55.0% | |
| ACATTTCGCCCACTGGCATC+CGG | + | chr7_3:3463526-3463545 | None:intergenic | 55.0% | |
| !! | CAATTGATGGTGGTGGTGGG+TGG | - | chr7_3:3463680-3463699 | Msa1089870:intron | 55.0% |
| CAGGACGGCCCGATACATAC+AGG | + | chr7_3:3459686-3459705 | None:intergenic | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | + | chr7_3:3459748-3459767 | None:intergenic | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | + | chr7_3:3460050-3460069 | None:intergenic | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | - | chr7_3:3460059-3460078 | Msa1089870:intron | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | - | chr7_3:3460143-3460162 | Msa1089870:intron | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | + | chr7_3:3460470-3460489 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | + | chr7_3:3461513-3461532 | None:intergenic | 60.0% | |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | + | chr7_3:3461517-3461536 | None:intergenic | 60.0% |
| CCCCTCATGACCAAACCCGA+TGG | - | chr7_3:3461517-3461536 | Msa1089870:CDS | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | + | chr7_3:3461522-3461541 | None:intergenic | 60.0% |
| CATGACCAAACCCGATGGGC+CGG | - | chr7_3:3461522-3461541 | Msa1089870:CDS | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | + | chr7_3:3461536-3461555 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | + | chr7_3:3463504-3463523 | None:intergenic | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | - | chr7_3:3463504-3463523 | Msa1089870:intron | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | + | chr7_3:3463510-3463529 | None:intergenic | 60.0% | |
| CACTGGCATCCGGTCGTCAA+AGG | + | chr7_3:3463516-3463535 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | - | chr7_3:3463514-3463533 | Msa1089870:intron | 60.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | + | chr7_3:3461530-3461549 | None:intergenic | 65.0% | |
| AACCCGATGGGCCGGAAGCA+TGG | - | chr7_3:3461530-3461549 | Msa1089870:CDS | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | + | chr7_3:3461535-3461554 | None:intergenic | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | + | chr7_3:3463507-3463526 | None:intergenic | 65.0% | |
| !! | TGATGGTGGTGGTGGGTGGG+TGG | - | chr7_3:3463684-3463703 | Msa1089870:intron | 65.0% |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | - | chr7_3:3459876-3459895 | Msa1089870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 3458464 | 3463970 | 3458464 | ID=Msa1089870;Name=Msa1089870 |
| chr7_3 | mRNA | 3458464 | 3463970 | 3458464 | ID=Msa1089870-mRNA-1;Parent=Msa1089870;Name=Msa1089870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=299|1|1|1|0.6|0.5|6|350|478 |
| chr7_3 | exon | 3458464 | 3459006 | 3458464 | ID=Msa1089870-mRNA-1:exon:1359;Parent=Msa1089870-mRNA-1 |
| chr7_3 | exon | 3459095 | 3459306 | 3459095 | ID=Msa1089870-mRNA-1:exon:1358;Parent=Msa1089870-mRNA-1 |
| chr7_3 | exon | 3461516 | 3461671 | 3461516 | ID=Msa1089870-mRNA-1:exon:1357;Parent=Msa1089870-mRNA-1 |
| chr7_3 | exon | 3461914 | 3462895 | 3461914 | ID=Msa1089870-mRNA-1:exon:1356;Parent=Msa1089870-mRNA-1 |
| chr7_3 | exon | 3463694 | 3463847 | 3463694 | ID=Msa1089870-mRNA-1:exon:1355;Parent=Msa1089870-mRNA-1 |
| chr7_3 | exon | 3463932 | 3463970 | 3463932 | ID=Msa1089870-mRNA-1:exon:1354;Parent=Msa1089870-mRNA-1 |
| chr7_3 | five_prime_UTR | 3463932 | 3463970 | 3463932 | ID=Msa1089870-mRNA-1:five_prime_utr;Parent=Msa1089870-mRNA-1 |
| chr7_3 | five_prime_UTR | 3463694 | 3463847 | 3463694 | ID=Msa1089870-mRNA-1:five_prime_utr;Parent=Msa1089870-mRNA-1 |
| chr7_3 | five_prime_UTR | 3462790 | 3462895 | 3462790 | ID=Msa1089870-mRNA-1:five_prime_utr;Parent=Msa1089870-mRNA-1 |
| chr7_3 | CDS | 3461914 | 3462789 | 3461914 | ID=Msa1089870-mRNA-1:cds;Parent=Msa1089870-mRNA-1 |
| chr7_3 | CDS | 3461516 | 3461671 | 3461516 | ID=Msa1089870-mRNA-1:cds;Parent=Msa1089870-mRNA-1 |
| chr7_3 | CDS | 3459095 | 3459306 | 3459095 | ID=Msa1089870-mRNA-1:cds;Parent=Msa1089870-mRNA-1 |
| chr7_3 | CDS | 3458814 | 3459006 | 3458814 | ID=Msa1089870-mRNA-1:cds;Parent=Msa1089870-mRNA-1 |
| chr7_3 | three_prime_UTR | 3458464 | 3458813 | 3458464 | ID=Msa1089870-mRNA-1:three_prime_utr;Parent=Msa1089870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
