AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1273630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1273630 MtrunA17_Chr8g0339291 97.863 468 7 1 1 468 1 465 0.0 937
Msa1273630 MtrunA17_Chr7g0235071 74.464 466 107 3 1 466 1 454 0.0 704
Msa1273630 MtrunA17_Chr8g0341821 71.150 461 117 7 1 458 1 448 0.0 619
Msa1273630 MtrunA17_Chr7g0238471 79.012 81 16 1 73 153 34 113 6.06e-41 142
Msa1273630 MtrunA17_Chr7g0238481 59.804 102 34 2 186 287 3 97 1.69e-30 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1273630 AT3G07270.1 61.028 467 160 10 1 460 1 452 0.0 548
Msa1273630 AT3G07270.2 60.814 467 161 10 1 460 1 452 0.0 544

Find 164 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGTATTTGGGATAATT+TGG 0.105309 8_3:+7380038 None:intergenic
CGTCCACTAACTAATGTATT+TGG 0.132612 8_3:+7380028 None:intergenic
CCAACCTTTGTAAATTAAAT+AGG 0.136027 8_3:+7376889 None:intergenic
TTTGATACTTTCTGCAAATC+TGG 0.223431 8_3:-7379666 Msa1273630:five_prime_UTR
TTTCAACTGACATTGCTTCT+AGG 0.247277 8_3:-7377345 Msa1273630:CDS
TCCACCTAAAAGTGGTGATA+TGG 0.266701 8_3:+7377468 None:intergenic
ATTGCAAATGCTACATCTTC+TGG 0.267208 8_3:-7377304 Msa1273630:CDS
TGCAATACTTTGCAAGAATA+AGG 0.267255 8_3:+7377321 None:intergenic
CTTACCTCCCGACTAATCTT+TGG 0.270087 8_3:-7377109 Msa1273630:three_prime_UTR
ACATAACGAACATTGGATTA+AGG 0.275924 8_3:+7379786 None:intergenic
GGCATAGATAATAATAAAAT+TGG 0.281629 8_3:-7378417 Msa1273630:CDS
TTTCTAGAATCAAGCCTAAA+AGG 0.282324 8_3:-7378096 Msa1273630:CDS
GTCTTGGTGAAGATATTAAT+AGG 0.315735 8_3:-7379475 Msa1273630:CDS
TGCTTAATCCAACAACTCTT+TGG 0.318636 8_3:+7378277 None:intergenic
TCTAGGGGAATTGAAAAGTT+TGG 0.319552 8_3:-7377403 Msa1273630:CDS
TAAATCTAGAGGCATTGATA+TGG 0.321920 8_3:-7377989 Msa1273630:CDS
TTATTATCTATGCCAGCTTC+AGG 0.326221 8_3:+7378426 None:intergenic
ATGGAAATGGAATGATTTAA+TGG 0.332206 8_3:-7376800 Msa1273630:three_prime_UTR
ATACATGTTTCGTCAGGTTC+CGG 0.333764 8_3:-7378063 Msa1273630:CDS
GAAAATGGAGTGAGTTTGTT+TGG 0.336188 8_3:-7379566 Msa1273630:CDS
CCGAGCTGAACTTGCCGTTT+TGG 0.340238 8_3:-7377657 Msa1273630:CDS
AGTATCAAACTTTCCAATAA+AGG 0.340635 8_3:+7379680 None:intergenic
CGGATTGATAGGTCCCGTTT+TGG 0.343833 8_3:+7377891 None:intergenic
GTCACACATGCATGATTTCT+AGG 0.349323 8_3:-7377420 Msa1273630:CDS
AGAAAGATTGTTTCTATGTC+AGG 0.355506 8_3:+7378114 None:intergenic
CTCCTAATCGTTTCGTGAAA+TGG 0.361018 8_3:-7377795 Msa1273630:CDS
TGGTTTCAAGCTCCAAGTTC+AGG 0.361526 8_3:-7377518 Msa1273630:CDS
AGGGTGATTATAATTCTTCT+TGG 0.375973 8_3:-7377281 Msa1273630:exon
ATCTAATAATCAGAAGAATA+TGG 0.376853 8_3:+7379852 None:intergenic
TCACATCCCTGTCAATGCTT+TGG 0.377050 8_3:+7377761 None:intergenic
TTGTAAGCCTTTCCTGAACT+TGG 0.378188 8_3:+7377506 None:intergenic
TCAGTTAGGAAGGAGCTTGC+AGG 0.382040 8_3:-7377820 Msa1273630:CDS
CATGTCGGTTACGTCCCTTC+TGG 0.382316 8_3:-7378300 Msa1273630:CDS
TACAATGGTGAGCTTGAAAA+TGG 0.382873 8_3:-7379581 Msa1273630:CDS
CAACCTTTGTAAATTAAATA+GGG 0.385863 8_3:+7376890 None:intergenic
CCTTCTGGCCAAAGAGTTGT+TGG 0.387250 8_3:-7378285 Msa1273630:CDS
AATACTGCGGTGACCATTGC+CGG 0.396163 8_3:+7377871 None:intergenic
CACCAAAGTTTCCTCCAAAA+CGG 0.401213 8_3:-7377905 Msa1273630:CDS
GTCCACTAACTAATGTATTT+GGG 0.403798 8_3:+7380029 None:intergenic
GATTATAATTCTTCTTGGAT+TGG 0.407694 8_3:-7377276 Msa1273630:three_prime_UTR
GTGTGTGATGATCAAATAAA+AGG 0.408208 8_3:+7376982 None:intergenic
ACCAAAGTTTCCTCCAAAAC+GGG 0.409382 8_3:-7377904 Msa1273630:CDS
TATAACCATCAATTCAAAAC+TGG 0.409554 8_3:+7376761 None:intergenic
CCTATTTAATTTACAAAGGT+TGG 0.412363 8_3:-7376889 Msa1273630:three_prime_UTR
ACAGCTACCATTGCTGTGTT+AGG 0.412616 8_3:-7377373 Msa1273630:CDS
ATGTGAACAACGCCGTGAAA+TGG 0.413540 8_3:+7377610 None:intergenic
GTGACCATTGCCGGATTGAT+AGG 0.415847 8_3:+7377880 None:intergenic
ATTGGTCATGCTGGCGGTGC+AGG 0.418734 8_3:-7378399 Msa1273630:CDS
CATTGGATTAAGGTTAATGT+TGG 0.422264 8_3:+7379796 None:intergenic
AGTCGGGAGGTAAGTAGAAT+TGG 0.422731 8_3:+7377118 None:intergenic
TACTTAACACTCTAGTTCTC+AGG 0.422840 8_3:+7377068 None:intergenic
ATCCCAAATACATTAGTTAG+TGG 0.426390 8_3:-7380031 Msa1273630:five_prime_UTR
CTTTCCAATAAAGGTCCAAA+AGG 0.428836 8_3:+7379689 None:intergenic
TCAGAAGAATATGGCATTTG+TGG 0.429253 8_3:+7379861 None:intergenic
GGACGATGTGATTGGTCATT+CGG 0.429425 8_3:-7380010 Msa1273630:five_prime_UTR
ATATTAATAGGGAAGGTCTT+AGG 0.430481 8_3:-7379463 Msa1273630:CDS
TATAGAGAAGAAGACTATAA+AGG 0.432062 8_3:+7376701 None:intergenic
AGCCATTTCACGAAACGATT+AGG 0.432174 8_3:+7377793 None:intergenic
ATGTTTGACTGCCATGGAAA+TGG 0.434237 8_3:-7376813 Msa1273630:three_prime_UTR
CTTTGGGAGAAGATTCAGTT+AGG 0.436286 8_3:-7377834 Msa1273630:CDS
ACTTCAAGAGCCTCAGCGTC+TGG 0.438758 8_3:-7378220 Msa1273630:CDS
AATAATAAAATTGGTCATGC+TGG 0.444404 8_3:-7378408 Msa1273630:CDS
GGGGATTGCCCGACCAATGC+TGG 0.454343 8_3:-7377951 Msa1273630:CDS
AGTGTGTTCAGCTTTACAAC+AGG 0.460100 8_3:-7378190 Msa1273630:CDS
ACACTCTAGTTCTCAGGAAA+AGG 0.460141 8_3:+7377074 None:intergenic
GGTGCTTTATTTCCTGAAGC+TGG 0.460502 8_3:-7378438 Msa1273630:CDS
AAAATGGAGTGAGTTTGTTT+GGG 0.462166 8_3:-7379565 Msa1273630:CDS
TTCAAAACTGGTAGAAGCTA+TGG 0.472542 8_3:+7376773 None:intergenic
TTGATACTTTCTGCAAATCT+GGG 0.475166 8_3:-7379665 Msa1273630:five_prime_UTR
TATGGAAAATATTCATGCTC+GGG 0.478199 8_3:-7377971 Msa1273630:CDS
CATCATATACTTCCATTTCA+CGG 0.483542 8_3:-7377622 Msa1273630:CDS
TCTTGGTGAAGATATTAATA+GGG 0.485627 8_3:-7379474 Msa1273630:CDS
CAGAAGAATATGGCATTTGT+GGG 0.489954 8_3:+7379862 None:intergenic
TGAACTTCCAAAGCATTGAC+AGG 0.490128 8_3:-7377768 Msa1273630:CDS
GGGAGAAGATTCAGTTAGGA+AGG 0.492445 8_3:-7377830 Msa1273630:CDS
GATGGACACCAGCATTGGTC+GGG 0.492769 8_3:+7377943 None:intergenic
TAGTTAGTGGACGATGTGAT+TGG 0.492827 8_3:-7380018 Msa1273630:five_prime_UTR
GTGATGCTCTATTGAGATAG+AGG 0.493671 8_3:-7379914 Msa1273630:five_prime_UTR
ATGGTAATCCAAAGATTAGT+CGG 0.496910 8_3:+7377101 None:intergenic
GCGAAGATACATGTTTCGTC+AGG 0.498142 8_3:-7378069 Msa1273630:CDS
GGAAACTTTGGTGGAAAGAG+TGG 0.500080 8_3:+7377915 None:intergenic
AACCGACATGACATTTGACT+TGG 0.512030 8_3:+7378313 None:intergenic
GTGGAAAGAGTGGAGAGAGA+TGG 0.512679 8_3:+7377925 None:intergenic
ATTAAATCATTCCATTTCCA+TGG 0.514829 8_3:+7376802 None:intergenic
ATAGGATATTTCCTTTCAGA+AGG 0.515226 8_3:-7377589 Msa1273630:CDS
ATTACATTTCCACCTAAAAG+TGG 0.515978 8_3:+7377460 None:intergenic
ATAAAACCTTTGAATGCTGC+TGG 0.516330 8_3:-7377712 Msa1273630:CDS
TGTGGGGAGGATGTTGTTGT+CGG 0.519500 8_3:+7379879 None:intergenic
CAACAGGGAATTCAACCAGC+AGG 0.521643 8_3:-7378174 Msa1273630:CDS
TCACACATGCATGATTTCTA+GGG 0.524065 8_3:-7377419 Msa1273630:CDS
TCAGAAGGATTCAGTCCGAT+TGG 0.524883 8_3:-7377574 Msa1273630:CDS
AAGGTTAATGTTGGAATGTG+TGG 0.531091 8_3:+7379805 None:intergenic
AGTACGATGGCTACCCCTGC+TGG 0.534876 8_3:+7378159 None:intergenic
GTCACCAAAATAAAACTTGG+TGG 0.535321 8_3:+7377034 None:intergenic
ATATGGAAAATATTCATGCT+CGG 0.536544 8_3:-7377972 Msa1273630:CDS
GTGTGTAGACTCTGCATTGG+TGG 0.537769 8_3:+7377197 None:intergenic
CAGTTAGGAAGGAGCTTGCA+GGG 0.539632 8_3:-7377819 Msa1273630:CDS
GTTGGAATGTGTGGATCCTA+AGG 0.544756 8_3:+7379814 None:intergenic
CAAAACGGGACCTATCAATC+CGG 0.547377 8_3:-7377890 Msa1273630:CDS
ACATGACATTTGACTTGGAA+AGG 0.549188 8_3:+7378318 None:intergenic
TTACAATACAGAGAAACCTT+AGG 0.550665 8_3:-7379830 Msa1273630:five_prime_UTR
TCAAGCTCCAAGTTCAGGAA+AGG 0.552246 8_3:-7377513 Msa1273630:CDS
TGGTAATCCAAAGATTAGTC+GGG 0.553278 8_3:+7377102 None:intergenic
TGCTCACATTGTGACCAAAA+CGG 0.553718 8_3:+7377643 None:intergenic
AAGATTCACAGTAGGAATAG+AGG 0.553746 8_3:+7378349 None:intergenic
ACCTCGCCAGCAGCATTCAA+AGG 0.556508 8_3:+7377706 None:intergenic
TAGAATCAAGCCTAAAAGGT+GGG 0.558239 8_3:-7378092 Msa1273630:CDS
AAAGGTGAGAAGACAAAACT+TGG 0.558987 8_3:+7377000 None:intergenic
CAACAACTCTTTGGCCAGAA+GGG 0.562430 8_3:+7378286 None:intergenic
GGTCATGCTGGCGGTGCAGG+CGG 0.562662 8_3:-7378396 Msa1273630:CDS
ATTCCCTATTTAATTTACAA+AGG 0.563853 8_3:-7376893 Msa1273630:three_prime_UTR
AAAGTGAAGGACATTGTTGA+AGG 0.564141 8_3:-7378459 Msa1273630:CDS
TTGCAAATGTTTGACTGCCA+TGG 0.565324 8_3:-7376819 Msa1273630:three_prime_UTR
AGAGAGATGGACACCAGCAT+TGG 0.567275 8_3:+7377938 None:intergenic
GACAGGGATGTGAAGCTGAA+TGG 0.568364 8_3:-7377751 Msa1273630:CDS
TTTCCAATAAAGGTCCAAAA+GGG 0.569415 8_3:+7379690 None:intergenic
CTGAATGGCTCCATCTGTGG+CGG 0.572648 8_3:-7377736 Msa1273630:CDS
CCAACAACTCTTTGGCCAGA+AGG 0.572834 8_3:+7378285 None:intergenic
TTTCACGGCGTTGTTCACAT+AGG 0.573583 8_3:-7377607 Msa1273630:CDS
TGTGTCACCAAAATAAAACT+TGG 0.579168 8_3:+7377031 None:intergenic
ACCTTTGAATGCTGCTGGCG+AGG 0.582613 8_3:-7377707 Msa1273630:CDS
TGAATGGCTCCATCTGTGGC+GGG 0.585957 8_3:-7377735 Msa1273630:CDS
AATAAAATTGGTCATGCTGG+CGG 0.590054 8_3:-7378405 Msa1273630:CDS
AGATGGACACCAGCATTGGT+CGG 0.590547 8_3:+7377942 None:intergenic
AGGAATAGAGGTCAATGTCT+CGG 0.592016 8_3:+7378361 None:intergenic
GACACCACATCGTGTTGCAA+AGG 0.593098 8_3:-7379438 Msa1273630:CDS
GGGACCTATCAATCCGGCAA+TGG 0.594081 8_3:-7377884 Msa1273630:CDS
CTATGTCAAGATTTACATGA+TGG 0.594768 8_3:-7376927 Msa1273630:three_prime_UTR
GCAAATGCTACATCTTCTGG+AGG 0.595070 8_3:-7377301 Msa1273630:CDS
AACAGGGAATTCAACCAGCA+GGG 0.596189 8_3:-7378173 Msa1273630:CDS
AAGTCGTTTAGCAAATACTT+CGG 0.596692 8_3:+7378239 None:intergenic
AAGCTGAATGGCTCCATCTG+TGG 0.597856 8_3:-7377739 Msa1273630:CDS
GGTGAAGATATTAATAGGGA+AGG 0.598277 8_3:-7379470 Msa1273630:CDS
TTTGATGAGGTGTGTTACAA+TGG 0.598703 8_3:-7379596 Msa1273630:CDS
GTTCTCAGGAAAAGGAGTCA+TGG 0.605666 8_3:+7377082 None:intergenic
AAATGTAATAGTAGTTGTAG+AGG 0.609306 8_3:-7377446 Msa1273630:CDS
TCGGACTGAATCCTTCTGAA+AGG 0.610194 8_3:+7377578 None:intergenic
GTTGCAAAGGCTCTTCGTGA+AGG 0.616197 8_3:-7379425 Msa1273630:CDS
CCAAAACGGCAAGTTCAGCT+CGG 0.621341 8_3:+7377657 None:intergenic
AGAATCAAGCCTAAAAGGTG+GGG 0.621752 8_3:-7378091 Msa1273630:CDS
GAGTTTGTTTGGGTGCAGTG+AGG 0.622421 8_3:-7379555 Msa1273630:CDS
AGAATATGGCATTTGTGGGG+AGG 0.623911 8_3:+7379866 None:intergenic
GCTCTTCGTGAAGGAACTAG+AGG 0.624632 8_3:-7379416 Msa1273630:intron
TAGCAAACAAGATTCACAGT+AGG 0.626754 8_3:+7378341 None:intergenic
TTCCAAGTCAAATGTCATGT+CGG 0.630990 8_3:-7378315 Msa1273630:CDS
CTAGAATCAAGCCTAAAAGG+TGG 0.636682 8_3:-7378093 Msa1273630:CDS
ACTTCGTCTGCCAGACGCTG+AGG 0.637304 8_3:+7378210 None:intergenic
GAACTTCCAAAGCATTGACA+GGG 0.642979 8_3:-7377767 Msa1273630:CDS
AGAGCCTTTGCAACACGATG+TGG 0.644665 8_3:+7379434 None:intergenic
ATGGAAAATATTCATGCTCG+GGG 0.645748 8_3:-7377970 Msa1273630:CDS
AAAGCATCCTAACACAGCAA+TGG 0.646055 8_3:+7377366 None:intergenic
GATGTCTTCTGACTTTATCG+AGG 0.647860 8_3:+7377173 None:intergenic
GGTGTGTGTAGACTCTGCAT+TGG 0.649317 8_3:+7377194 None:intergenic
TAATCCAAAGATTAGTCGGG+AGG 0.657655 8_3:+7377105 None:intergenic
GTGTGTTCAGCTTTACAACA+GGG 0.658653 8_3:-7378189 Msa1273630:CDS
CACACATGCATGATTTCTAG+GGG 0.664632 8_3:-7377418 Msa1273630:CDS
TGAGATAGAGGATATCTATG+TGG 0.670816 8_3:-7379902 Msa1273630:five_prime_UTR
TTTGAATGCTGCTGGCGAGG+TGG 0.672064 8_3:-7377704 Msa1273630:CDS
GTGCAGTGAGGTTGAAGATG+AGG 0.675141 8_3:-7379543 Msa1273630:CDS
ACAGGGAATTCAACCAGCAG+GGG 0.676707 8_3:-7378172 Msa1273630:CDS
CAAATGCTACATCTTCTGGA+GGG 0.677186 8_3:-7377300 Msa1273630:CDS
AGAAGAATATGGCATTTGTG+GGG 0.703428 8_3:+7379863 None:intergenic
ATGTGTACACTGAAGTACGA+TGG 0.705661 8_3:+7378146 None:intergenic
TTGCTATTGAAGATGCTGTG+AGG 0.756355 8_3:-7379511 Msa1273630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTATTTGTTTAAATATT+TGG - chr8_3:7377480-7377499 Msa1273630:CDS 10.0%
!!! TCTTAATTTTTGCTATTTTT+TGG - chr8_3:7377111-7377130 Msa1273630:three_prime_UTR 15.0%
!!! CATTGATGTTTTTTTTTTAT+GGG - chr8_3:7377549-7377568 Msa1273630:CDS 15.0%
!!! ATTAATCTTTTAACCATTTT+AGG - chr8_3:7377804-7377823 Msa1273630:CDS 15.0%
!!! TTAATCTTTTAACCATTTTA+GGG - chr8_3:7377805-7377824 Msa1273630:CDS 15.0%
!!! TTTTATCTTATTAAATCTAG+AGG - chr8_3:7378749-7378768 Msa1273630:intron 15.0%
!!! ATTTTCAATTCTAAAATCTT+TGG - chr8_3:7378898-7378917 Msa1273630:intron 15.0%
!!! TTTTCAATTCTAAAATCTTT+GGG - chr8_3:7378899-7378918 Msa1273630:intron 15.0%
!!! ATAATTTTGACATCCAAAAA+GGG + chr8_3:7376789-7376808 None:intergenic 20.0%
!! ATCTAATAATCAGAAGAATA+TGG + chr8_3:7376900-7376919 None:intergenic 20.0%
!! TAAAAAAACATAACGAACAT+TGG + chr8_3:7376973-7376992 None:intergenic 20.0%
!!! GCATTGATGTTTTTTTTTTA+TGG - chr8_3:7377548-7377567 Msa1273630:CDS 20.0%
!! GGAAGAGAATAATAATTATT+GGG + chr8_3:7378170-7378189 None:intergenic 20.0%
!! TGGAAGAGAATAATAATTAT+TGG + chr8_3:7378171-7378190 None:intergenic 20.0%
!! GGCATAGATAATAATAAAAT+TGG - chr8_3:7378332-7378351 Msa1273630:CDS 20.0%
!!! TTTTAGAATTGAAAATACTG+CGG + chr8_3:7378894-7378913 None:intergenic 20.0%
!!! ATTCCCTATTTAATTTACAA+AGG - chr8_3:7379856-7379875 Msa1273630:five_prime_UTR 20.0%
!! CAACCTTTGTAAATTAAATA+GGG + chr8_3:7379862-7379881 None:intergenic 20.0%
!! CTAATGTATTTGGGATAATT+TGG + chr8_3:7376714-7376733 None:intergenic 25.0%
!!! CATAATTTTGACATCCAAAA+AGG + chr8_3:7376790-7376809 None:intergenic 25.0%
!! TTTTGGATGTCAAAATTATG+AGG - chr8_3:7376790-7376809 Msa1273630:three_prime_UTR 25.0%
!!! AATTTTTTCTATCACCCTTT+TGG - chr8_3:7377045-7377064 Msa1273630:three_prime_UTR 25.0%
! AGTATCAAACTTTCCAATAA+AGG + chr8_3:7377072-7377091 None:intergenic 25.0%
!!! ATTTTTTGGTGTGATATCAA+TGG - chr8_3:7377125-7377144 Msa1273630:three_prime_UTR 25.0%
!!! TTTTTTGGTGTGATATCAAT+GGG - chr8_3:7377126-7377145 Msa1273630:three_prime_UTR 25.0%
! TCTTGGTGAAGATATTAATA+GGG - chr8_3:7377275-7377294 Msa1273630:three_prime_UTR 25.0%
!! GAACACTAATGATTTTTGTT+TGG - chr8_3:7377358-7377377 Msa1273630:CDS 25.0%
! TTATCTAGAGATTAATGAGT+TGG - chr8_3:7377590-7377609 Msa1273630:CDS 25.0%
! TAGTATATGATAGAACATTC+TGG - chr8_3:7377622-7377641 Msa1273630:CDS 25.0%
! GTATGGTTCAATATCTAAAT+TGG - chr8_3:7377737-7377756 Msa1273630:CDS 25.0%
! GTTCAATATCTAAATTGGAT+AGG - chr8_3:7377742-7377761 Msa1273630:CDS 25.0%
! ATATTCAAACTTCCCTAAAA+TGG + chr8_3:7377820-7377839 None:intergenic 25.0%
! GAAAAAAATGATTGTAGTCA+AGG - chr8_3:7377853-7377872 Msa1273630:CDS 25.0%
! TATTTAAGTGAGAGATAAAG+AGG - chr8_3:7378080-7378099 Msa1273630:CDS 25.0%
! AATTATTGGGCTAATATGTT+AGG + chr8_3:7378157-7378176 None:intergenic 25.0%
! AAAACAAGAGAGCAAATTAT+TGG + chr8_3:7378191-7378210 None:intergenic 25.0%
! AATAATAAAATTGGTCATGC+TGG - chr8_3:7378341-7378360 Msa1273630:CDS 25.0%
! ATATGGAAAATATTCATGCT+CGG - chr8_3:7378777-7378796 Msa1273630:intron 25.0%
!! TGTAAAAGTGATTTTCCAAT+CGG + chr8_3:7379193-7379212 None:intergenic 25.0%
! AAATGTAATAGTAGTTGTAG+AGG - chr8_3:7379303-7379322 Msa1273630:intron 25.0%
! GATTATAATTCTTCTTGGAT+TGG - chr8_3:7379473-7379492 Msa1273630:CDS 25.0%
!!! AAATCCACCAAGTTTTATTT+TGG - chr8_3:7379711-7379730 Msa1273630:five_prime_UTR 25.0%
! CCAACCTTTGTAAATTAAAT+AGG + chr8_3:7379863-7379882 None:intergenic 25.0%
!! CCTATTTAATTTACAAAGGT+TGG - chr8_3:7379860-7379879 Msa1273630:five_prime_UTR 25.0%
!!! GATTGTTTTGTGTAATGTAA+AGG - chr8_3:7379893-7379912 Msa1273630:five_prime_UTR 25.0%
! ATTAAATCATTCCATTTCCA+TGG + chr8_3:7379950-7379969 None:intergenic 25.0%
! ATGGAAATGGAATGATTTAA+TGG - chr8_3:7379949-7379968 Msa1273630:five_prime_UTR 25.0%
! TATAACCATCAATTCAAAAC+TGG + chr8_3:7379991-7380010 None:intergenic 25.0%
! TATAGAGAAGAAGACTATAA+AGG + chr8_3:7380051-7380070 None:intergenic 25.0%
ATCCCAAATACATTAGTTAG+TGG - chr8_3:7376718-7376737 Msa1273630:three_prime_UTR 30.0%
GTCCACTAACTAATGTATTT+GGG + chr8_3:7376723-7376742 None:intergenic 30.0%
! TACATGTTTAAGTCCCTTTT+TGG - chr8_3:7376773-7376792 Msa1273630:three_prime_UTR 30.0%
TTACAATACAGAGAAACCTT+AGG - chr8_3:7376919-7376938 Msa1273630:three_prime_UTR 30.0%
CATTGGATTAAGGTTAATGT+TGG + chr8_3:7376956-7376975 None:intergenic 30.0%
ACATAACGAACATTGGATTA+AGG + chr8_3:7376966-7376985 None:intergenic 30.0%
TTTCCAATAAAGGTCCAAAA+GGG + chr8_3:7377062-7377081 None:intergenic 30.0%
TTTGATACTTTCTGCAAATC+TGG - chr8_3:7377083-7377102 Msa1273630:three_prime_UTR 30.0%
TTGATACTTTCTGCAAATCT+GGG - chr8_3:7377084-7377103 Msa1273630:three_prime_UTR 30.0%
! AAAATGGAGTGAGTTTGTTT+GGG - chr8_3:7377184-7377203 Msa1273630:three_prime_UTR 30.0%
GTCTTGGTGAAGATATTAAT+AGG - chr8_3:7377274-7377293 Msa1273630:three_prime_UTR 30.0%
ATATTAATAGGGAAGGTCTT+AGG - chr8_3:7377286-7377305 Msa1273630:exon 30.0%
GGTATAAGATTTCTTTCAAG+TGG - chr8_3:7377501-7377520 Msa1273630:CDS 30.0%
! TAAGATTTCTTTCAAGTGGT+TGG - chr8_3:7377505-7377524 Msa1273630:CDS 30.0%
!! ATAGTTTTTCAACTTTCCTG+CGG - chr8_3:7377703-7377722 Msa1273630:CDS 30.0%
AGGAAATTCGTGTGATTTAT+TGG - chr8_3:7377873-7377892 Msa1273630:CDS 30.0%
TACGAAAATATTCGATCAAC+AGG - chr8_3:7377964-7377983 Msa1273630:CDS 30.0%
ACGAAAATATTCGATCAACA+GGG - chr8_3:7377965-7377984 Msa1273630:CDS 30.0%
CAGAAACAAGAGAAAGAAAT+CGG + chr8_3:7378119-7378138 None:intergenic 30.0%
! TTTTGTCTATAACCTGGAAA+AGG + chr8_3:7378272-7378291 None:intergenic 30.0%
!!! TTCACTTTTTGTCTATAACC+TGG + chr8_3:7378278-7378297 None:intergenic 30.0%
AGGTTATAGACAAAAAGTGA+AGG - chr8_3:7378277-7378296 Msa1273630:CDS 30.0%
AAGTCGTTTAGCAAATACTT+CGG + chr8_3:7378513-7378532 None:intergenic 30.0%
!! AGAAAGATTGTTTCTATGTC+AGG + chr8_3:7378638-7378657 None:intergenic 30.0%
!! TTTCTAGAATCAAGCCTAAA+AGG - chr8_3:7378653-7378672 Msa1273630:intron 30.0%
!! TAAATCTAGAGGCATTGATA+TGG - chr8_3:7378760-7378779 Msa1273630:intron 30.0%
TATGGAAAATATTCATGCTC+GGG - chr8_3:7378778-7378797 Msa1273630:intron 30.0%
CATCATATACTTCCATTTCA+CGG - chr8_3:7379127-7379146 Msa1273630:intron 30.0%
ATAGGATATTTCCTTTCAGA+AGG - chr8_3:7379160-7379179 Msa1273630:intron 30.0%
ATTACATTTCCACCTAAAAG+TGG + chr8_3:7379292-7379311 None:intergenic 30.0%
TGCAATACTTTGCAAGAATA+AGG + chr8_3:7379431-7379450 None:intergenic 30.0%
AGGGTGATTATAATTCTTCT+TGG - chr8_3:7379468-7379487 Msa1273630:CDS 30.0%
! TCGTTTTCTGCAATTTTTGA+AGG - chr8_3:7379521-7379540 Msa1273630:CDS 30.0%
ATGGTAATCCAAAGATTAGT+CGG + chr8_3:7379651-7379670 None:intergenic 30.0%
TGTGTCACCAAAATAAAACT+TGG + chr8_3:7379721-7379740 None:intergenic 30.0%
!!! AAGTTTTATTTTGGTGACAC+AGG - chr8_3:7379720-7379739 Msa1273630:five_prime_UTR 30.0%
GTGTGTGATGATCAAATAAA+AGG + chr8_3:7379770-7379789 None:intergenic 30.0%
CTATGTCAAGATTTACATGA+TGG - chr8_3:7379822-7379841 Msa1273630:five_prime_UTR 30.0%
!!! TTCTACCAGTTTTGAATTGA+TGG - chr8_3:7379983-7380002 Msa1273630:five_prime_UTR 30.0%
CGTCCACTAACTAATGTATT+TGG + chr8_3:7376724-7376743 None:intergenic 35.0%
TGAGATAGAGGATATCTATG+TGG - chr8_3:7376847-7376866 Msa1273630:three_prime_UTR 35.0%
AGAAGAATATGGCATTTGTG+GGG + chr8_3:7376889-7376908 None:intergenic 35.0%
CAGAAGAATATGGCATTTGT+GGG + chr8_3:7376890-7376909 None:intergenic 35.0%
TCAGAAGAATATGGCATTTG+TGG + chr8_3:7376891-7376910 None:intergenic 35.0%
AAGGTTAATGTTGGAATGTG+TGG + chr8_3:7376947-7376966 None:intergenic 35.0%
CTTTCCAATAAAGGTCCAAA+AGG + chr8_3:7377063-7377082 None:intergenic 35.0%
!!! ATCAATGGGATGTTTTGATG+AGG - chr8_3:7377140-7377159 Msa1273630:three_prime_UTR 35.0%
TTTGATGAGGTGTGTTACAA+TGG - chr8_3:7377153-7377172 Msa1273630:three_prime_UTR 35.0%
TACAATGGTGAGCTTGAAAA+TGG - chr8_3:7377168-7377187 Msa1273630:three_prime_UTR 35.0%
! GAAAATGGAGTGAGTTTGTT+TGG - chr8_3:7377183-7377202 Msa1273630:three_prime_UTR 35.0%
GGTGAAGATATTAATAGGGA+AGG - chr8_3:7377279-7377298 Msa1273630:exon 35.0%
TAGGAAGTTGTTCATGTTAG+TGG - chr8_3:7377761-7377780 Msa1273630:CDS 35.0%
AGGAAGTTGTTCATGTTAGT+GGG - chr8_3:7377762-7377781 Msa1273630:CDS 35.0%
CATGTTAGTGGGATGTATAT+AGG - chr8_3:7377773-7377792 Msa1273630:CDS 35.0%
CATAGTATGTGATTAGTGCA+TGG - chr8_3:7377901-7377920 Msa1273630:CDS 35.0%
AAGTGAGAGATAAAGAGGAA+TGG - chr8_3:7378085-7378104 Msa1273630:CDS 35.0%
AAAGTGAAGGACATTGTTGA+AGG - chr8_3:7378290-7378309 Msa1273630:CDS 35.0%
TTATTATCTATGCCAGCTTC+AGG + chr8_3:7378326-7378345 None:intergenic 35.0%
AATAAAATTGGTCATGCTGG+CGG - chr8_3:7378344-7378363 Msa1273630:CDS 35.0%
AAGATTCACAGTAGGAATAG+AGG + chr8_3:7378403-7378422 None:intergenic 35.0%
TAGCAAACAAGATTCACAGT+AGG + chr8_3:7378411-7378430 None:intergenic 35.0%
!! ACATGACATTTGACTTGGAA+AGG + chr8_3:7378434-7378453 None:intergenic 35.0%
TTCCAAGTCAAATGTCATGT+CGG - chr8_3:7378434-7378453 Msa1273630:CDS 35.0%
TGCTTAATCCAACAACTCTT+TGG + chr8_3:7378475-7378494 None:intergenic 35.0%
TAGAATCAAGCCTAAAAGGT+GGG - chr8_3:7378657-7378676 Msa1273630:intron 35.0%
!!! GTTTTTGTTTTCAAAGACGC+CGG + chr8_3:7378708-7378727 None:intergenic 35.0%
AAAACAAAAACGCAGACGTA+TGG - chr8_3:7378717-7378736 Msa1273630:intron 35.0%
AAACAAAAACGCAGACGTAT+GGG - chr8_3:7378718-7378737 Msa1273630:intron 35.0%
ATGGAAAATATTCATGCTCG+GGG - chr8_3:7378779-7378798 Msa1273630:intron 35.0%
ATAAAACCTTTGAATGCTGC+TGG - chr8_3:7379037-7379056 Msa1273630:intron 35.0%
! CAGTCGATAGTGCATTTTTA+TGG - chr8_3:7379211-7379230 Msa1273630:intron 35.0%
!! GAAACCATATCACCACTTTT+AGG - chr8_3:7379277-7379296 Msa1273630:intron 35.0%
TCACACATGCATGATTTCTA+GGG - chr8_3:7379330-7379349 Msa1273630:intron 35.0%
TCTAGGGGAATTGAAAAGTT+TGG - chr8_3:7379346-7379365 Msa1273630:intron 35.0%
TTTCAACTGACATTGCTTCT+AGG - chr8_3:7379404-7379423 Msa1273630:intron 35.0%
ATTGCAAATGCTACATCTTC+TGG - chr8_3:7379445-7379464 Msa1273630:CDS 35.0%
! TGGTAATCCAAAGATTAGTC+GGG + chr8_3:7379650-7379669 None:intergenic 35.0%
!! TACTTAACACTCTAGTTCTC+AGG + chr8_3:7379684-7379703 None:intergenic 35.0%
GTCACCAAAATAAAACTTGG+TGG + chr8_3:7379718-7379737 None:intergenic 35.0%
AAAGGTGAGAAGACAAAACT+TGG + chr8_3:7379752-7379771 None:intergenic 35.0%
AAACCACCTCAGAAAAATTC+AGG - chr8_3:7379793-7379812 Msa1273630:five_prime_UTR 35.0%
AACCACCTCAGAAAAATTCA+GGG - chr8_3:7379794-7379813 Msa1273630:five_prime_UTR 35.0%
TTCAAAACTGGTAGAAGCTA+TGG + chr8_3:7379979-7379998 None:intergenic 35.0%
! TAGTTAGTGGACGATGTGAT+TGG - chr8_3:7376731-7376750 Msa1273630:three_prime_UTR 40.0%
GTGATGCTCTATTGAGATAG+AGG - chr8_3:7376835-7376854 Msa1273630:three_prime_UTR 40.0%
! TCACCCTTTTGGACCTTTAT+TGG - chr8_3:7377056-7377075 Msa1273630:three_prime_UTR 40.0%
! TTGCTATTGAAGATGCTGTG+AGG - chr8_3:7377238-7377257 Msa1273630:three_prime_UTR 40.0%
! TGCTGTGAGGATTCTTTTGT+TGG - chr8_3:7377251-7377270 Msa1273630:three_prime_UTR 40.0%
! GCTGTGAGGATTCTTTTGTT+GGG - chr8_3:7377252-7377271 Msa1273630:three_prime_UTR 40.0%
! AGGATTCTTTTGTTGGGTCT+TGG - chr8_3:7377258-7377277 Msa1273630:three_prime_UTR 40.0%
CATACACAATTCTATTCCGC+AGG + chr8_3:7377722-7377741 None:intergenic 40.0%
CTGCGGAATAGAATTGTGTA+TGG - chr8_3:7377720-7377739 Msa1273630:CDS 40.0%
!! CTTTTTGCTGTGTTGAGCAT+TGG - chr8_3:7378025-7378044 Msa1273630:CDS 40.0%
! TGAAGCAATGAACCTTTTCC+AGG - chr8_3:7378257-7378276 Msa1273630:CDS 40.0%
AGGAATAGAGGTCAATGTCT+CGG + chr8_3:7378391-7378410 None:intergenic 40.0%
AACCGACATGACATTTGACT+TGG + chr8_3:7378439-7378458 None:intergenic 40.0%
AGTGTGTTCAGCTTTACAAC+AGG - chr8_3:7378559-7378578 Msa1273630:intron 40.0%
GTGTGTTCAGCTTTACAACA+GGG - chr8_3:7378560-7378579 Msa1273630:intron 40.0%
ATGTGTACACTGAAGTACGA+TGG + chr8_3:7378606-7378625 None:intergenic 40.0%
CTAGAATCAAGCCTAAAAGG+TGG - chr8_3:7378656-7378675 Msa1273630:intron 40.0%
AGAATCAAGCCTAAAAGGTG+GGG - chr8_3:7378658-7378677 Msa1273630:intron 40.0%
ATACATGTTTCGTCAGGTTC+CGG - chr8_3:7378686-7378705 Msa1273630:intron 40.0%
CACCAAAGTTTCCTCCAAAA+CGG - chr8_3:7378844-7378863 Msa1273630:intron 40.0%
ACCAAAGTTTCCTCCAAAAC+GGG - chr8_3:7378845-7378864 Msa1273630:intron 40.0%
! CTTTGGGAGAAGATTCAGTT+AGG - chr8_3:7378915-7378934 Msa1273630:intron 40.0%
CTCCTAATCGTTTCGTGAAA+TGG - chr8_3:7378954-7378973 Msa1273630:intron 40.0%
AGCCATTTCACGAAACGATT+AGG + chr8_3:7378959-7378978 None:intergenic 40.0%
!! TGAACTTCCAAAGCATTGAC+AGG - chr8_3:7378981-7379000 Msa1273630:intron 40.0%
!! GAACTTCCAAAGCATTGACA+GGG - chr8_3:7378982-7379001 Msa1273630:intron 40.0%
TGCTCACATTGTGACCAAAA+CGG + chr8_3:7379109-7379128 None:intergenic 40.0%
TTGTAAGCCTTTCCTGAACT+TGG + chr8_3:7379246-7379265 None:intergenic 40.0%
!! ACCATATCACCACTTTTAGG+TGG - chr8_3:7379280-7379299 Msa1273630:intron 40.0%
TCCACCTAAAAGTGGTGATA+TGG + chr8_3:7379284-7379303 None:intergenic 40.0%
GTCACACATGCATGATTTCT+AGG - chr8_3:7379329-7379348 Msa1273630:intron 40.0%
! CACACATGCATGATTTCTAG+GGG - chr8_3:7379331-7379350 Msa1273630:intron 40.0%
! AAAGCATCCTAACACAGCAA+TGG + chr8_3:7379386-7379405 None:intergenic 40.0%
CAAATGCTACATCTTCTGGA+GGG - chr8_3:7379449-7379468 Msa1273630:CDS 40.0%
GATGTCTTCTGACTTTATCG+AGG + chr8_3:7379579-7379598 None:intergenic 40.0%
! TAATCCAAAGATTAGTCGGG+AGG + chr8_3:7379647-7379666 None:intergenic 40.0%
!! ACACTCTAGTTCTCAGGAAA+AGG + chr8_3:7379678-7379697 None:intergenic 40.0%
ACCACCTCAGAAAAATTCAG+GGG - chr8_3:7379795-7379814 Msa1273630:five_prime_UTR 40.0%
TTGCAAATGTTTGACTGCCA+TGG - chr8_3:7379930-7379949 Msa1273630:five_prime_UTR 40.0%
ATGTTTGACTGCCATGGAAA+TGG - chr8_3:7379936-7379955 Msa1273630:five_prime_UTR 40.0%
! GGACGATGTGATTGGTCATT+CGG - chr8_3:7376739-7376758 Msa1273630:three_prime_UTR 45.0%
AGAATATGGCATTTGTGGGG+AGG + chr8_3:7376886-7376905 None:intergenic 45.0%
GTTGGAATGTGTGGATCCTA+AGG + chr8_3:7376938-7376957 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr8_3:7377671-7377690 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr8_3:7377672-7377691 None:intergenic 45.0%
!! GGTGCTTTATTTCCTGAAGC+TGG - chr8_3:7378311-7378330 Msa1273630:CDS 45.0%
CAACAACTCTTTGGCCAGAA+GGG + chr8_3:7378466-7378485 None:intergenic 45.0%
AACAGGGAATTCAACCAGCA+GGG - chr8_3:7378576-7378595 Msa1273630:intron 45.0%
GCGAAGATACATGTTTCGTC+AGG - chr8_3:7378680-7378699 Msa1273630:intron 45.0%
GGAAACTTTGGTGGAAAGAG+TGG + chr8_3:7378837-7378856 None:intergenic 45.0%
!!! CGTTTTGGAGGAAACTTTGG+TGG + chr8_3:7378846-7378865 None:intergenic 45.0%
!!! TCCCGTTTTGGAGGAAACTT+TGG + chr8_3:7378849-7378868 None:intergenic 45.0%
! ATTGATAGGTCCCGTTTTGG+AGG + chr8_3:7378858-7378877 None:intergenic 45.0%
CAAAACGGGACCTATCAATC+CGG - chr8_3:7378859-7378878 Msa1273630:intron 45.0%
GGGAGAAGATTCAGTTAGGA+AGG - chr8_3:7378919-7378938 Msa1273630:intron 45.0%
TCACATCCCTGTCAATGCTT+TGG + chr8_3:7378991-7379010 None:intergenic 45.0%
ATGTGAACAACGCCGTGAAA+TGG + chr8_3:7379142-7379161 None:intergenic 45.0%
TTTCACGGCGTTGTTCACAT+AGG - chr8_3:7379142-7379161 Msa1273630:intron 45.0%
TCGGACTGAATCCTTCTGAA+AGG + chr8_3:7379174-7379193 None:intergenic 45.0%
TCAGAAGGATTCAGTCCGAT+TGG - chr8_3:7379175-7379194 Msa1273630:intron 45.0%
TGGTTTCAAGCTCCAAGTTC+AGG - chr8_3:7379231-7379250 Msa1273630:intron 45.0%
TCAAGCTCCAAGTTCAGGAA+AGG - chr8_3:7379236-7379255 Msa1273630:intron 45.0%
ACAGCTACCATTGCTGTGTT+AGG - chr8_3:7379376-7379395 Msa1273630:intron 45.0%
GCAAATGCTACATCTTCTGG+AGG - chr8_3:7379448-7379467 Msa1273630:CDS 45.0%
AGTCGGGAGGTAAGTAGAAT+TGG + chr8_3:7379634-7379653 None:intergenic 45.0%
CTTACCTCCCGACTAATCTT+TGG - chr8_3:7379640-7379659 Msa1273630:five_prime_UTR 45.0%
GTTCTCAGGAAAAGGAGTCA+TGG + chr8_3:7379670-7379689 None:intergenic 45.0%
CCACCTCAGAAAAATTCAGG+GGG - chr8_3:7379796-7379815 Msa1273630:five_prime_UTR 45.0%
! TGACCCCCTGAATTTTTCTG+AGG + chr8_3:7379802-7379821 None:intergenic 45.0%
TGTGGGGAGGATGTTGTTGT+CGG + chr8_3:7376873-7376892 None:intergenic 50.0%
! GAGTTTGTTTGGGTGCAGTG+AGG - chr8_3:7377194-7377213 Msa1273630:three_prime_UTR 50.0%
GTGCAGTGAGGTTGAAGATG+AGG - chr8_3:7377206-7377225 Msa1273630:three_prime_UTR 50.0%
GACACCACATCGTGTTGCAA+AGG - chr8_3:7377311-7377330 Msa1273630:CDS 50.0%
AGAGCCTTTGCAACACGATG+TGG + chr8_3:7377318-7377337 None:intergenic 50.0%
GTTGCAAAGGCTCTTCGTGA+AGG - chr8_3:7377324-7377343 Msa1273630:CDS 50.0%
GCTCTTCGTGAAGGAACTAG+AGG - chr8_3:7377333-7377352 Msa1273630:CDS 50.0%
ACTAAGTGGGGTCAGCTACA+TGG + chr8_3:7377659-7377678 None:intergenic 50.0%
ATGTAGCTGACCCCACTTAG+TGG - chr8_3:7377658-7377677 Msa1273630:CDS 50.0%
TGTAGCTGACCCCACTTAGT+GGG - chr8_3:7377659-7377678 Msa1273630:CDS 50.0%
TGACCCCACTTAGTGGGATA+AGG - chr8_3:7377665-7377684 Msa1273630:CDS 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr8_3:7377673-7377692 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr8_3:7377670-7377689 Msa1273630:CDS 50.0%
GTGCATGGAGAGATGTTCTG+AGG - chr8_3:7377916-7377935 Msa1273630:CDS 50.0%
CCAACAACTCTTTGGCCAGA+AGG + chr8_3:7378467-7378486 None:intergenic 50.0%
CCTTCTGGCCAAAGAGTTGT+TGG - chr8_3:7378464-7378483 Msa1273630:CDS 50.0%
CAACAGGGAATTCAACCAGC+AGG - chr8_3:7378575-7378594 Msa1273630:intron 50.0%
ACAGGGAATTCAACCAGCAG+GGG - chr8_3:7378577-7378596 Msa1273630:intron 50.0%
! GTATCTTCGCCCCACCTTTT+AGG + chr8_3:7378670-7378689 None:intergenic 50.0%
!! AGATGGACACCAGCATTGGT+CGG + chr8_3:7378810-7378829 None:intergenic 50.0%
AGAGAGATGGACACCAGCAT+TGG + chr8_3:7378814-7378833 None:intergenic 50.0%
GTGGAAAGAGTGGAGAGAGA+TGG + chr8_3:7378827-7378846 None:intergenic 50.0%
! CGGATTGATAGGTCCCGTTT+TGG + chr8_3:7378861-7378880 None:intergenic 50.0%
GTGACCATTGCCGGATTGAT+AGG + chr8_3:7378872-7378891 None:intergenic 50.0%
AATACTGCGGTGACCATTGC+CGG + chr8_3:7378881-7378900 None:intergenic 50.0%
TCAGTTAGGAAGGAGCTTGC+AGG - chr8_3:7378929-7378948 Msa1273630:intron 50.0%
CAGTTAGGAAGGAGCTTGCA+GGG - chr8_3:7378930-7378949 Msa1273630:intron 50.0%
GACAGGGATGTGAAGCTGAA+TGG - chr8_3:7378998-7379017 Msa1273630:intron 50.0%
AAGCTGAATGGCTCCATCTG+TGG - chr8_3:7379010-7379029 Msa1273630:intron 50.0%
!! AGGTTTTATCCCGCCACAGA+TGG + chr8_3:7379026-7379045 None:intergenic 50.0%
CCAAAACGGCAAGTTCAGCT+CGG + chr8_3:7379095-7379114 None:intergenic 50.0%
GTGTGTAGACTCTGCATTGG+TGG + chr8_3:7379555-7379574 None:intergenic 50.0%
GGTGTGTGTAGACTCTGCAT+TGG + chr8_3:7379558-7379577 None:intergenic 50.0%
!! CCCCCTGAATTTTTCTGAGG+TGG + chr8_3:7379799-7379818 None:intergenic 50.0%
! CATGTCGGTTACGTCCCTTC+TGG - chr8_3:7378449-7378468 Msa1273630:CDS 55.0%
ACTTCAAGAGCCTCAGCGTC+TGG - chr8_3:7378529-7378548 Msa1273630:intron 55.0%
!! GATGGACACCAGCATTGGTC+GGG + chr8_3:7378809-7378828 None:intergenic 55.0%
GGGACCTATCAATCCGGCAA+TGG - chr8_3:7378865-7378884 Msa1273630:intron 55.0%
CTGAATGGCTCCATCTGTGG+CGG - chr8_3:7379013-7379032 Msa1273630:intron 55.0%
TGAATGGCTCCATCTGTGGC+GGG - chr8_3:7379014-7379033 Msa1273630:intron 55.0%
ACCTTTGAATGCTGCTGGCG+AGG - chr8_3:7379042-7379061 Msa1273630:intron 55.0%
ACCTCGCCAGCAGCATTCAA+AGG + chr8_3:7379046-7379065 None:intergenic 55.0%
TTTGAATGCTGCTGGCGAGG+TGG - chr8_3:7379045-7379064 Msa1273630:intron 55.0%
!! CCGAGCTGAACTTGCCGTTT+TGG - chr8_3:7379092-7379111 Msa1273630:intron 55.0%
ATTGGTCATGCTGGCGGTGC+AGG - chr8_3:7378350-7378369 Msa1273630:CDS 60.0%
ACTTCGTCTGCCAGACGCTG+AGG + chr8_3:7378542-7378561 None:intergenic 60.0%
AGTACGATGGCTACCCCTGC+TGG + chr8_3:7378593-7378612 None:intergenic 60.0%
GGGGATTGCCCGACCAATGC+TGG - chr8_3:7378798-7378817 Msa1273630:intron 65.0%
GGTCATGCTGGCGGTGCAGG+CGG - chr8_3:7378353-7378372 Msa1273630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 7376681 7380090 7376681 ID=Msa1273630;Name=Msa1273630
chr8_3 mRNA 7376681 7380090 7376681 ID=Msa1273630-mRNA-1;Parent=Msa1273630;Name=Msa1273630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=463|1|1|1|1|1|2|616|468
chr8_3 exon 7376681 7378492 7376681 ID=Msa1273630-mRNA-1:exon:2905;Parent=Msa1273630-mRNA-1
chr8_3 exon 7379417 7380090 7379417 ID=Msa1273630-mRNA-1:exon:2904;Parent=Msa1273630-mRNA-1
chr8_3 five_prime_UTR 7379628 7380090 7379628 ID=Msa1273630-mRNA-1:five_prime_utr;Parent=Msa1273630-mRNA-1
chr8_3 CDS 7379417 7379627 7379417 ID=Msa1273630-mRNA-1:cds;Parent=Msa1273630-mRNA-1
chr8_3 CDS 7377297 7378492 7377297 ID=Msa1273630-mRNA-1:cds;Parent=Msa1273630-mRNA-1
chr8_3 three_prime_UTR 7376681 7377296 7376681 ID=Msa1273630-mRNA-1:three_prime_utr;Parent=Msa1273630-mRNA-1
Gene Sequence

>Msa1273630

ATGGGATGTTTTGATGAGGTGTGTTACAATGGTGAGCTTGAAAATGGAGTGAGTTTGTTTGGGTGCAGTGAGGTTGAAGATGAGGCTAATACAGTTGCTATTGAAGATGCTGTGAGGATTCTTTTGTTGGGTCTTGGTGAAGATATTAATAGGGAAGGTCTTAGGAAGACACCACATCGTGTTGCAAAGGCTCTTCGTGAAGGAACTAGAGGTTATAGACAAAAAGTGAAGGACATTGTTGAAGGTGCTTTATTTCCTGAAGCTGGCATAGATAATAATAAAATTGGTCATGCTGGCGGTGCAGGCGGACTTGTGATTGTCCGAGACATTGACCTCTATTCCTACTGTGAATCTTGTTTGCTACCTTTCCAAGTCAAATGTCATGTCGGTTACGTCCCTTCTGGCCAAAGAGTTGTTGGATTAAGCAAGCTCTCTCGCGTCGCCGAAGTATTTGCTAAACGACTTCAAGAGCCTCAGCGTCTGGCAGACGAAGTGTGTTCAGCTTTACAACAGGGAATTCAACCAGCAGGGGTAGCCATCGTACTTCAGTGTACACATATTCACTTTCCTGACATAGAAACAATCTTTCTAGAATCAAGCCTAAAAGGTGGGGCGAAGATACATGTTTCGTCAGGTTCCGGCGTCTTTGAAAACAAAAACGCAGACGTATGGGCTGATTTCTTTTATCTTATTAAATCTAGAGGCATTGATATGGAAAATATTCATGCTCGGGGATTGCCCGACCAATGCTGGTGTCCATCTCTCTCCACTCTTTCCACCAAAGTTTCCTCCAAAACGGGACCTATCAATCCGGCAATGGTCACCGCAGTATTTTCAATTCTAAAATCTTTGGGAGAAGATTCAGTTAGGAAGGAGCTTGCAGGGACTCCTAATCGTTTCGTGAAATGGCTGTTGAACTTCCAAAGCATTGACAGGGATGTGAAGCTGAATGGCTCCATCTGTGGCGGGATAAAACCTTTGAATGCTGCTGGCGAGGTGGTAAATAATGATAAACAAATATACACCGAGCTGAACTTGCCGTTTTGGTCACAATGTGAGCATCATATACTTCCATTTCACGGCGTTGTTCACATAGGATATTTCCTTTCAGAAGGATTCAGTCCGATTGGAAAATCACTTTTACAGTCGATAGTGCATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACAAAGCAAATAGCAGAAACCATATCACCACTTTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCAAGTCACACATGCATGATTTCTAGGGGAATTGAAAAGTTTGGAAGCAGTACAGCTACCATTGCTGTGTTAGGATGCTTTTCAACTGACATTGCTTCTAGGACCTTATTCTTGCAAAGTATTGCAAATGCTACATCTTCTGGAGGGTGA
Protein sequence

>Msa1273630

MGCFDEVCYNGELENGVSLFGCSEVEDEANTVAIEDAVRILLLGLGEDINREGLRKTPHRVAKALREGTRGYRQKVKDIVEGALFPEAGIDNNKIGHAGGAGGLVIVRDIDLYSYCESCLLPFQVKCHVGYVPSGQRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALQQGIQPAGVAIVLQCTHIHFPDIETIFLESSLKGGAKIHVSSGSGVFENKNADVWADFFYLIKSRGIDMENIHARGLPDQCWCPSLSTLSTKVSSKTGPINPAMVTAVFSILKSLGEDSVRKELAGTPNRFVKWLLNFQSIDRDVKLNGSICGGIKPLNAAGEVVNNDKQIYTELNLPFWSQCEHHILPFHGVVHIGYFLSEGFSPIGKSLLQSIVHFYGFKLQVQERLTKQIAETISPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGCFSTDIASRTLFLQSIANATSSGG*