AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1273650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1273650 MtrunA17_Chr8g0339311 92.871 533 35 3 1 533 1 530 0.0 1023
Msa1273650 MtrunA17_Chr6g0458561 45.507 523 268 8 11 531 26 533 1.36e-158 462
Msa1273650 MtrunA17_Chr6g0466941 45.200 500 266 5 40 533 28 525 1.32e-155 454
Msa1273650 MtrunA17_Chr6g0451741 45.287 488 257 4 52 531 66 551 3.95e-153 449
Msa1273650 MtrunA17_Chr8g0339331 46.721 488 252 6 45 530 38 519 6.73e-153 447
Msa1273650 MtrunA17_Chr6g0466901 44.848 495 263 6 44 530 29 521 2.10e-150 441
Msa1273650 MtrunA17_Chr6g0451751 45.726 503 261 7 39 533 33 531 3.69e-150 441
Msa1273650 MtrunA17_Chr2g0304871 43.893 524 281 7 8 529 6 518 2.11e-148 436
Msa1273650 MtrunA17_Chr6g0451641 41.264 538 297 8 1 533 1 524 2.21e-148 436
Msa1273650 MtrunA17_Chr6g0451691 44.376 489 261 5 52 531 47 533 2.67e-148 436
Msa1273650 MtrunA17_Chr4g0046631 47.035 489 242 7 47 530 47 523 1.80e-146 431
Msa1273650 MtrunA17_Chr6g0451781 44.088 499 271 6 39 531 66 562 5.65e-142 421
Msa1273650 MtrunA17_Chr4g0008101 41.750 503 283 5 39 533 31 531 1.71e-139 413
Msa1273650 MtrunA17_Chr3g0082701 42.449 490 272 5 52 533 45 532 2.31e-137 408
Msa1273650 MtrunA17_Chr4g0053621 37.859 523 290 8 5 524 4 494 3.38e-113 345
Msa1273650 MtrunA17_Chr5g0401681 36.812 527 296 10 5 529 4 495 1.65e-111 340
Msa1273650 MtrunA17_Chr6g0451681 36.981 530 252 9 6 531 31 482 3.41e-108 331
Msa1273650 MtrunA17_Chr4g0039391 38.526 475 268 8 55 524 44 499 1.21e-107 331
Msa1273650 MtrunA17_Chr5g0401691 37.728 493 279 9 35 524 40 507 2.77e-105 325
Msa1273650 MtrunA17_Chr8g0344181 37.705 488 288 10 46 530 38 512 9.52e-103 318
Msa1273650 MtrunA17_Chr8g0344151 37.166 487 287 11 47 530 40 510 5.35e-101 314
Msa1273650 MtrunA17_Chr1g0174461 34.535 527 318 10 2 525 3 505 1.32e-99 310
Msa1273650 MtrunA17_Chr4g0061381 36.910 466 278 6 71 530 54 509 1.17e-98 308
Msa1273650 MtrunA17_Chr4g0052861 35.029 511 297 9 15 524 14 490 1.46e-98 307
Msa1273650 MtrunA17_Chr3g0086691 34.894 470 290 5 70 532 54 514 3.06e-98 306
Msa1273650 MtrunA17_Chr8g0390881 37.670 515 290 13 13 517 4 497 6.14e-98 306
Msa1273650 MtrunA17_Chr3g0086651 35.897 468 288 6 70 532 54 514 2.07e-96 302
Msa1273650 MtrunA17_Chr8g0344191 35.405 531 314 11 3 530 40 544 7.04e-96 301
Msa1273650 MtrunA17_Chr3g0084921 34.196 541 313 13 1 527 2 513 1.08e-95 300
Msa1273650 MtrunA17_Chr6g0484841 37.113 485 276 11 42 517 33 497 1.34e-95 300
Msa1273650 MtrunA17_Chr4g0052851 36.100 482 276 7 44 524 32 482 8.04e-95 297
Msa1273650 MtrunA17_Chr3g0086661 35.470 468 290 6 70 532 54 514 1.47e-94 297
Msa1273650 MtrunA17_Chr4g0052881 35.742 512 293 11 15 524 14 491 2.20e-94 296
Msa1273650 MtrunA17_Chr1g0174451 34.702 487 303 7 42 525 32 506 1.88e-93 294
Msa1273650 MtrunA17_Chr3g0094171 34.170 518 317 10 15 530 18 513 6.23e-93 293
Msa1273650 MtrunA17_Chr1g0174441 34.331 501 304 9 36 525 41 527 1.13e-92 293
Msa1273650 MtrunA17_Chr1g0174481 34.231 520 317 9 6 525 6 500 1.64e-92 291
Msa1273650 MtrunA17_Chr6g0484811 36.253 491 289 8 42 525 33 506 1.18e-91 289
Msa1273650 MtrunA17_Chr2g0296651 36.601 459 264 6 71 524 54 490 1.78e-91 289
Msa1273650 MtrunA17_Chr4g0017411 35.744 484 275 9 44 524 29 479 2.80e-91 288
Msa1273650 MtrunA17_Chr1g0174471 36.722 482 288 12 49 525 52 521 1.21e-90 287
Msa1273650 MtrunA17_Chr5g0430101 34.818 494 292 10 40 525 31 502 2.45e-90 286
Msa1273650 MtrunA17_Chr4g0058231 33.591 518 306 12 9 517 3 491 2.98e-90 285
Msa1273650 MtrunA17_Chr4g0030701 35.529 501 295 9 43 527 32 520 4.89e-90 286
Msa1273650 MtrunA17_Chr7g0235551 35.146 478 281 9 40 505 28 488 1.68e-88 281
Msa1273650 MtrunA17_Chr7g0258221 34.774 486 301 8 44 525 32 505 3.99e-88 280
Msa1273650 MtrunA17_Chr5g0430131 34.818 494 293 10 40 525 32 504 4.23e-88 280
Msa1273650 MtrunA17_Chr2g0296661 36.441 472 280 8 58 527 44 497 1.71e-87 278
Msa1273650 MtrunA17_Chr8g0362701 35.106 470 294 7 57 525 46 505 4.54e-87 278
Msa1273650 MtrunA17_Chr8g0361471 34.004 497 296 11 7 498 3 472 6.62e-87 277
Msa1273650 MtrunA17_Chr5g0430081 34.195 503 297 12 33 525 25 503 1.02e-86 276
Msa1273650 MtrunA17_Chr7g0254641 32.525 495 319 8 44 531 35 521 1.20e-85 274
Msa1273650 MtrunA17_Chr5g0430031 32.857 490 295 11 11 492 6 469 2.11e-85 273
Msa1273650 MtrunA17_Chr5g0430091 33.401 494 301 10 40 525 32 505 5.30e-85 272
Msa1273650 MtrunA17_Chr7g0258211 31.770 469 298 9 56 517 49 502 1.24e-84 271
Msa1273650 MtrunA17_Chr3g0101611 33.333 483 295 11 42 517 34 496 3.23e-84 270
Msa1273650 MtrunA17_Chr1g0207841 34.151 489 285 11 57 525 49 520 3.74e-84 270
Msa1273650 MtrunA17_Chr6g0466331 33.602 497 298 11 7 498 3 472 1.07e-83 269
Msa1273650 MtrunA17_Chr2g0310381 32.505 483 302 11 42 517 21 486 1.70e-83 268
Msa1273650 MtrunA17_Chr3g0101601 33.333 483 289 11 46 520 36 493 2.41e-83 268
Msa1273650 MtrunA17_Chr3g0116681 32.895 532 303 18 4 523 13 502 2.91e-83 268
Msa1273650 MtrunA17_Chr5g0431641 31.569 529 324 11 4 526 6 502 2.93e-83 267
Msa1273650 MtrunA17_Chr4g0011961 34.141 495 287 11 38 517 18 488 4.43e-83 266
Msa1273650 MtrunA17_Chr8g0362481 34.615 442 280 5 85 525 3 436 5.81e-83 265
Msa1273650 MtrunA17_Chr4g0058281 33.678 484 298 12 42 519 43 509 6.01e-83 267
Msa1273650 MtrunA17_Chr6g0465511 33.400 497 299 11 7 498 3 472 6.74e-83 266
Msa1273650 MtrunA17_Chr1g0156101 33.551 459 286 11 47 498 36 482 7.36e-83 266
Msa1273650 MtrunA17_Chr4g0058201 32.317 492 304 12 40 523 22 492 8.70e-83 266
Msa1273650 MtrunA17_Chr3g0094231 33.051 472 301 9 54 525 44 500 1.78e-82 265
Msa1273650 MtrunA17_Chr3g0116741 33.063 493 301 13 39 523 42 513 2.37e-82 265
Msa1273650 MtrunA17_Chr3g0101691 33.144 528 312 15 1 517 1 498 2.64e-82 265
Msa1273650 MtrunA17_Chr2g0310391 31.884 483 305 11 42 517 21 486 3.48e-82 264
Msa1273650 MtrunA17_Chr5g0419691 32.661 496 304 11 40 527 24 497 3.54e-82 264
Msa1273650 MtrunA17_Chr3g0101721 33.542 480 291 12 46 517 37 496 4.55e-82 265
Msa1273650 MtrunA17_Chr4g0011921 33.269 520 302 13 7 517 6 489 6.01e-82 264
Msa1273650 MtrunA17_Chr4g0057001 32.784 485 307 9 43 525 47 514 1.04e-81 264
Msa1273650 MtrunA17_Chr5g0445461 32.558 516 314 9 4 515 6 491 1.14e-81 263
Msa1273650 MtrunA17_Chr4g0011871 32.863 496 304 11 40 527 24 498 1.51e-81 263
Msa1273650 MtrunA17_Chr4g0058191 33.194 479 289 13 53 523 32 487 2.79e-81 262
Msa1273650 MtrunA17_Chr7g0255531 31.944 504 319 10 37 533 19 505 3.04e-81 262
Msa1273650 MtrunA17_Chr3g0101711 33.017 527 313 16 1 517 1 497 3.09e-81 262
Msa1273650 MtrunA17_Chr3g0101581 31.679 524 319 13 6 520 5 498 3.82e-81 262
Msa1273650 MtrunA17_Chr3g0101661 32.381 525 319 13 1 517 1 497 7.56e-81 261
Msa1273650 MtrunA17_Chr1g0162811 30.093 535 332 14 1 527 1 501 2.14e-80 260
Msa1273650 MtrunA17_Chr4g0030711 33.888 481 283 11 57 517 48 513 4.02e-80 260
Msa1273650 MtrunA17_Chr8g0351801 32.848 481 291 10 56 517 44 511 5.33e-80 259
Msa1273650 MtrunA17_Chr3g0101621 32.988 482 289 10 46 520 33 487 5.41e-80 258
Msa1273650 MtrunA17_Chr3g0101631 31.939 526 314 13 9 523 6 498 6.44e-80 258
Msa1273650 MtrunA17_Chr4g0056951 32.189 466 304 5 60 525 56 509 8.38e-80 259
Msa1273650 MtrunA17_Chr5g0431671 32.099 486 305 9 46 526 38 503 1.77e-79 258
Msa1273650 MtrunA17_Chr3g0101671 32.353 510 309 14 17 517 16 498 1.85e-79 258
Msa1273650 MtrunA17_Chr8g0382901 33.753 477 279 9 44 517 26 468 1.99e-79 267
Msa1273650 MtrunA17_Chr8g0382901 33.196 485 302 10 44 525 490 955 1.29e-76 259
Msa1273650 MtrunA17_Chr4g0024771 30.593 523 323 12 11 526 13 502 2.15e-79 257
Msa1273650 MtrunA17_Chr4g0011901 33.951 486 299 11 42 522 26 494 2.46e-79 257
Msa1273650 MtrunA17_Chr4g0047641 31.274 518 325 11 5 517 18 509 5.10e-79 257
Msa1273650 MtrunA17_Chr6g0472311 31.978 541 326 13 3 525 2 518 1.06e-78 256
Msa1273650 MtrunA17_Chr7g0218611 32.906 468 290 10 47 509 34 482 1.90e-78 254
Msa1273650 MtrunA17_Chr3g0101571 30.426 516 326 11 7 517 5 492 1.90e-78 254
Msa1273650 MtrunA17_Chr6g0463801 32.150 479 299 8 46 520 37 493 3.73e-78 254
Msa1273650 MtrunA17_Chr3g0101731 31.677 483 295 12 46 517 36 494 4.17e-78 254
Msa1273650 MtrunA17_Chr4g0011881 33.891 478 285 10 40 507 25 481 4.63e-78 254
Msa1273650 MtrunA17_Chr5g0445441 31.081 518 323 9 4 517 47 534 5.68e-78 254
Msa1273650 MtrunA17_Chr5g0402971 44.755 286 150 4 42 324 36 316 1.20e-77 247
Msa1273650 MtrunA17_Chr5g0403321 33.333 486 292 12 45 517 33 499 2.63e-77 252
Msa1273650 MtrunA17_Chr4g0011981 33.469 490 296 10 39 517 19 489 3.21e-77 251
Msa1273650 MtrunA17_Chr7g0218601 32.389 494 303 14 33 517 21 492 5.88e-77 251
Msa1273650 MtrunA17_Chr5g0445381 30.916 524 327 12 6 524 38 531 9.08e-77 251
Msa1273650 MtrunA17_Chr4g0047631 32.115 520 316 13 3 517 18 505 9.10e-77 251
Msa1273650 MtrunA17_Chr4g0058261 32.377 488 302 14 42 519 59 528 9.74e-77 251
Msa1273650 MtrunA17_Chr5g0403351 30.247 486 310 10 42 517 30 496 1.86e-76 249
Msa1273650 MtrunA17_Chr3g0101811 32.317 492 294 13 46 517 37 509 2.51e-76 250
Msa1273650 MtrunA17_Chr4g0020041 29.693 522 326 11 5 517 6 495 3.39e-76 249
Msa1273650 MtrunA17_Chr5g0430111 36.098 410 240 8 40 444 32 424 3.64e-76 246
Msa1273650 MtrunA17_Chr5g0403331 30.361 527 327 11 1 517 1 497 5.49e-76 248
Msa1273650 MtrunA17_Chr5g0445451 30.116 518 328 8 4 517 6 493 6.89e-76 248
Msa1273650 MtrunA17_Chr3g0101701 31.743 482 298 12 46 517 38 498 8.22e-76 248
Msa1273650 MtrunA17_Chr7g0224551 32.000 500 294 11 36 513 22 497 1.27e-75 248
Msa1273650 MtrunA17_Chr3g0101651 32.099 486 295 13 44 517 36 498 1.68e-75 247
Msa1273650 MtrunA17_Chr8g0372251 32.558 430 261 9 52 472 41 450 5.17e-75 246
Msa1273650 MtrunA17_Chr4g0047691 31.081 518 323 12 5 517 20 508 5.22e-75 246
Msa1273650 MtrunA17_Chr1g0162801 32.463 536 321 14 1 526 1 505 1.05e-74 245
Msa1273650 MtrunA17_Chr7g0224561 31.928 498 297 11 36 513 22 497 1.06e-74 245
Msa1273650 MtrunA17_Chr5g0446161 29.679 529 333 14 5 526 6 502 1.50e-74 244
Msa1273650 MtrunA17_Chr5g0406651 32.227 512 306 10 14 517 12 490 5.14e-74 243
Msa1273650 MtrunA17_Chr4g0047661 30.134 521 331 11 3 517 17 510 7.90e-74 243
Msa1273650 MtrunA17_Chr3g0101821 33.266 493 298 12 33 517 25 494 8.82e-74 243
Msa1273650 MtrunA17_Chr5g0405001 28.872 523 326 10 7 517 18 506 8.91e-74 243
Msa1273650 MtrunA17_Chr3g0101801 31.887 530 313 15 3 520 11 504 9.80e-74 243
Msa1273650 MtrunA17_Chr3g0101751 31.358 523 315 15 3 517 15 501 1.39e-73 242
Msa1273650 MtrunA17_Chr3g0101761 31.549 523 314 15 3 517 8 494 1.86e-73 242
Msa1273650 MtrunA17_Chr1g0156081 32.207 503 321 12 5 498 15 506 3.70e-73 242
Msa1273650 MtrunA17_Chr5g0445421 30.888 518 303 11 4 517 80 546 7.94e-73 241
Msa1273650 MtrunA17_Chr5g0445531 30.515 485 294 11 46 517 38 492 2.49e-72 239
Msa1273650 MtrunA17_Chr4g0046681 53.883 206 94 1 325 530 31 235 2.92e-72 230
Msa1273650 MtrunA17_Chr4g0039901 31.809 481 308 8 45 522 34 497 3.14e-72 238
Msa1273650 MtrunA17_Chr5g0446151 30.595 487 312 10 44 526 39 503 3.29e-72 238
Msa1273650 MtrunA17_Chr5g0431501 31.185 481 308 12 52 525 39 503 4.03e-71 236
Msa1273650 MtrunA17_Chr5g0431461 31.185 481 308 12 52 525 39 503 4.03e-71 236
Msa1273650 MtrunA17_Chr4g0035921 30.769 494 304 12 39 513 28 502 6.35e-71 235
Msa1273650 MtrunA17_Chr1g0200961 33.402 485 297 12 44 520 27 493 2.70e-70 233
Msa1273650 MtrunA17_Chr4g0076161 29.699 532 335 13 1 523 1 502 3.70e-70 233
Msa1273650 MtrunA17_Chr1g0213671 32.136 501 310 15 35 523 24 506 1.13e-69 232
Msa1273650 MtrunA17_Chr3g0101831 30.754 517 328 11 7 517 3 495 1.19e-69 232
Msa1273650 MtrunA17_Chr8g0357421 30.268 522 323 13 7 517 3 494 1.87e-69 231
Msa1273650 MtrunA17_Chr3g0101741 31.350 437 273 10 85 517 3 416 5.42e-69 228
Msa1273650 MtrunA17_Chr2g0280261 33.603 494 299 11 41 528 30 500 8.93e-69 229
Msa1273650 MtrunA17_Chr1g0160851 31.470 483 302 14 45 520 33 493 1.05e-68 229
Msa1273650 MtrunA17_Chr6g0463791 31.094 521 314 13 7 517 7 492 1.80e-68 228
Msa1273650 MtrunA17_Chr4g0046691 40.493 284 154 5 41 324 34 302 3.12e-67 219
Msa1273650 MtrunA17_Chr1g0167321 31.679 524 316 17 17 530 13 504 4.32e-67 225
Msa1273650 MtrunA17_Chr4g0046351 30.567 494 296 14 47 517 36 505 5.83e-67 225
Msa1273650 MtrunA17_Chr6g0451811 48.341 211 106 2 323 531 1 210 1.24e-66 214
Msa1273650 MtrunA17_Chr4g0046321 30.162 494 298 14 47 517 36 505 1.53e-66 224
Msa1273650 MtrunA17_Chr7g0265611 29.184 490 326 8 35 517 35 510 2.28e-66 223
Msa1273650 MtrunA17_Chr8g0357431 29.456 533 334 12 7 527 3 505 2.99e-66 223
Msa1273650 MtrunA17_Chr4g0046331 28.277 534 330 14 10 517 1 507 4.21e-66 223
Msa1273650 MtrunA17_Chr4g0046661 53.023 215 100 1 311 525 11 224 2.22e-65 212
Msa1273650 MtrunA17_Chr5g0431511 28.395 486 327 10 46 525 33 503 2.46e-65 220
Msa1273650 MtrunA17_Chr6g0451771 47.887 213 108 2 323 533 18 229 1.19e-64 210
Msa1273650 MtrunA17_Chr5g0395321 31.068 515 306 16 17 520 18 494 1.40e-64 219
Msa1273650 MtrunA17_Chr4g0046671 40.283 283 155 6 47 324 45 318 1.79e-64 213
Msa1273650 MtrunA17_Chr5g0395331 30.495 505 318 13 25 520 21 501 1.83e-64 218
Msa1273650 MtrunA17_Chr1g0205361 30.247 486 310 11 45 523 33 496 1.96e-64 218
Msa1273650 MtrunA17_Chr6g0451801 39.865 296 165 7 39 324 31 323 6.72e-64 211
Msa1273650 MtrunA17_Chr5g0419451 29.876 482 308 14 46 523 61 516 9.19e-64 216
Msa1273650 MtrunA17_Chr1g0164211 31.967 488 306 13 39 520 23 490 9.90e-64 216
Msa1273650 MtrunA17_Chr5g0402981 48.744 199 100 2 335 532 2 199 3.49e-63 205
Msa1273650 MtrunA17_Chr8g0356001 28.926 484 323 9 41 520 36 502 1.21e-62 213
Msa1273650 MtrunA17_Chr3g0107611 28.757 539 361 9 4 530 10 537 2.11e-62 213
Msa1273650 MtrunA17_Chr7g0246221 29.757 494 306 13 42 519 30 498 7.81e-62 211
Msa1273650 MtrunA17_Chr2g0314731 28.889 495 324 10 5 498 1 468 9.02e-61 207
Msa1273650 MtrunA17_Chr2g0314721 29.630 486 316 9 14 498 19 479 1.89e-60 207
Msa1273650 MtrunA17_Chr5g0395381 29.344 518 292 14 14 520 15 469 4.57e-60 206
Msa1273650 MtrunA17_Chr8g0370641 28.571 525 346 9 17 530 18 524 2.66e-59 205
Msa1273650 MtrunA17_Chr8g0346261 31.263 483 306 14 46 524 85 545 4.57e-59 204
Msa1273650 MtrunA17_Chr1g0205371 30.228 526 329 12 1 520 1 494 6.09e-59 203
Msa1273650 MtrunA17_Chr8g0355961 29.461 482 321 9 42 520 37 502 1.85e-58 202
Msa1273650 MtrunA17_Chr8g0370651 27.757 526 357 9 14 530 17 528 2.10e-58 202
Msa1273650 MtrunA17_Chr1g0197851 29.638 469 282 12 50 492 14 460 4.18e-58 201
Msa1273650 MtrunA17_Chr1g0197871 29.550 467 290 12 39 492 20 460 7.44e-58 200
Msa1273650 MtrunA17_Chr1g0197881 30.211 427 272 10 70 492 55 459 1.49e-57 199
Msa1273650 MtrunA17_Chr1g0197891 30.211 427 272 10 70 492 56 460 3.60e-57 198
Msa1273650 MtrunA17_Chr7g0246151 28.540 459 311 9 65 519 52 497 4.32e-57 198
Msa1273650 MtrunA17_Chr1g0176831 28.802 434 293 6 65 498 81 498 6.33e-57 198
Msa1273650 MtrunA17_Chr3g0107541 29.253 482 324 9 56 530 60 531 1.28e-56 197
Msa1273650 MtrunA17_Chr4g0046701 54.878 164 73 1 367 530 1 163 2.20e-56 186
Msa1273650 MtrunA17_Chr7g0246121 28.785 469 299 12 65 521 52 497 2.35e-56 196
Msa1273650 MtrunA17_Chr5g0430071 34.132 334 198 7 200 525 39 358 1.24e-55 191
Msa1273650 MtrunA17_Chr1g0200951 29.691 485 308 15 52 525 67 529 4.67e-54 191
Msa1273650 MtrunA17_Chr5g0432751 28.228 457 303 10 45 493 32 471 3.96e-52 185
Msa1273650 MtrunA17_Chr7g0246131 28.942 501 322 14 35 522 23 502 4.55e-51 182
Msa1273650 MtrunA17_Chr8g0377341 28.995 438 289 12 82 518 103 519 2.27e-50 181
Msa1273650 MtrunA17_Chr1g0174431 42.365 203 110 3 329 525 5 206 8.87e-50 170
Msa1273650 MtrunA17_Chr1g0210091 28.266 467 303 13 70 523 88 535 2.95e-48 175
Msa1273650 MtrunA17_Chr5g0431591 33.129 326 198 7 197 517 1 311 3.42e-48 169
Msa1273650 MtrunA17_Chr8g0390871 43.069 202 107 4 316 513 18 215 2.34e-47 164
Msa1273650 MtrunA17_Chr7g0246181 27.862 463 309 12 65 519 52 497 2.99e-47 172
Msa1273650 MtrunA17_Chr1g0160861 32.012 328 209 8 197 520 17 334 1.14e-46 166
Msa1273650 MtrunA17_Chr1g0198191 24.190 525 368 13 6 524 15 515 3.64e-46 169
Msa1273650 MtrunA17_Chr6g0451761 32.770 296 161 5 11 304 14 273 2.10e-44 158
Msa1273650 MtrunA17_Chr4g0011941 40.777 206 114 4 325 527 1 201 3.22e-44 155
Msa1273650 MtrunA17_Chr4g0011851 37.089 213 126 3 318 527 9 216 4.24e-44 155
Msa1273650 MtrunA17_Chr2g0334021 26.804 485 316 12 52 524 41 498 5.00e-43 160
Msa1273650 MtrunA17_Chr5g0446101 30.211 331 208 8 197 523 1 312 5.14e-42 152
Msa1273650 MtrunA17_Chr2g0280121 25.532 470 329 9 63 525 55 510 8.85e-41 154
Msa1273650 MtrunA17_Chr4g0074581 24.593 492 340 12 46 524 69 542 1.73e-40 154
Msa1273650 MtrunA17_Chr2g0280081 25.370 473 318 13 66 525 555 1005 2.21e-40 156
Msa1273650 MtrunA17_Chr2g0280081 25.000 456 309 11 62 505 50 484 2.14e-36 144
Msa1273650 MtrunA17_Chr2g0310351 35.204 196 121 3 325 517 1 193 5.54e-40 144
Msa1273650 MtrunA17_Chr4g0058211 35.644 202 122 4 325 523 19 215 2.75e-39 142
Msa1273650 MtrunA17_Chr5g0409051 23.242 512 351 12 36 525 18 509 3.85e-39 149
Msa1273650 MtrunA17_Chr1g0174421 29.814 322 201 6 7 328 23 319 5.14e-39 145
Msa1273650 MtrunA17_Chr2g0280071 25.147 509 338 15 36 524 51 536 1.13e-38 150
Msa1273650 MtrunA17_Chr6g0463621 37.379 206 118 4 325 523 1 202 1.90e-38 139
Msa1273650 MtrunA17_Chr2g0280041 24.632 475 325 13 63 525 83 536 6.71e-37 143
Msa1273650 MtrunA17_Chr8g0387101 25.586 469 321 11 67 525 57 507 5.52e-36 140
Msa1273650 MtrunA17_Chr3g0101591 35.233 193 119 2 328 517 42 231 6.33e-36 134
Msa1273650 MtrunA17_Chr2g0314781 39.873 158 92 1 341 498 1 155 6.95e-36 132
Msa1273650 MtrunA17_Chr3g0086681 40.230 174 98 3 363 532 5 176 5.05e-35 129
Msa1273650 MtrunA17_Chr3g0105761 36.979 192 119 1 339 530 14 203 1.92e-34 129
Msa1273650 MtrunA17_Chr1g0156061 32.669 251 161 7 251 498 193 438 2.14e-34 135
Msa1273650 MtrunA17_Chr1g0156061 36.879 141 85 2 47 187 59 195 1.65e-22 100
Msa1273650 MtrunA17_Chr4g0011931 32.014 278 163 6 3 279 2 254 1.91e-33 129
Msa1273650 MtrunA17_Chr4g0011861 31.120 241 156 5 40 279 24 255 2.86e-33 129
Msa1273650 MtrunA17_Chr5g0413911 22.929 519 350 15 35 525 33 529 2.83e-32 130
Msa1273650 MtrunA17_Chr5g0445761 36.782 174 107 2 325 498 1 171 4.47e-32 122
Msa1273650 MtrunA17_Chr5g0445351 38.095 168 98 3 353 517 52 216 1.11e-31 121
Msa1273650 MtrunA17_Chr8g0364651 23.178 535 356 14 6 525 5 499 2.20e-31 127
Msa1273650 MtrunA17_Chr5g0423621 36.994 173 98 5 351 520 14 178 2.39e-31 119
Msa1273650 MtrunA17_Chr6g0477081 29.771 262 162 5 175 435 1 241 2.78e-31 121
Msa1273650 MtrunA17_Chr5g0430151 35.754 179 108 4 351 525 1 176 4.82e-31 119
Msa1273650 MtrunA17_Chr5g0430041 37.762 143 85 2 351 492 1 140 2.64e-30 116
Msa1273650 MtrunA17_Chr4g0030741 30.464 302 175 9 56 348 74 349 5.05e-30 120
Msa1273650 MtrunA17_Chr3g0107551 30.769 208 142 2 325 531 5 211 1.25e-29 115
Msa1273650 MtrunA17_Chr3g0135841 23.950 476 319 11 45 491 42 503 2.75e-29 121
Msa1273650 MtrunA17_Chr1g0207851 29.078 282 171 8 57 326 49 313 3.03e-29 118
Msa1273650 MtrunA17_Chr3g0116731 40.000 150 73 3 376 525 1 133 1.09e-28 110
Msa1273650 MtrunA17_Chr0c19g0493771 23.874 444 306 12 66 500 205 625 7.42e-28 118
Msa1273650 MtrunA17_Chr1g0151221 24.948 477 308 15 45 491 39 495 1.59e-27 116
Msa1273650 MtrunA17_Chr5g0445371 29.044 272 145 7 261 525 1 231 2.19e-27 110
Msa1273650 MtrunA17_Chr3g0117301 40.171 117 67 1 376 492 1 114 2.41e-27 106
Msa1273650 MtrunA17_Chr2g0280011 30.693 202 134 2 329 525 12 212 2.86e-27 109
Msa1273650 MtrunA17_Chr5g0430171 33.333 213 127 5 40 252 32 229 1.19e-26 108
Msa1273650 MtrunA17_Chr5g0445751 27.273 297 191 8 14 309 19 291 3.57e-26 108
Msa1273650 MtrunA17_Chr1g0163451 30.126 239 156 4 272 501 267 503 3.49e-25 108
Msa1273650 MtrunA17_Chr5g0396521 31.604 212 116 6 323 507 346 555 4.45e-25 108
Msa1273650 MtrunA17_Chr3g0101541 35.252 139 84 2 373 508 1 136 1.42e-24 99.4
Msa1273650 MtrunA17_Chr2g0280061 29.208 202 137 2 329 525 12 212 9.17e-24 99.4
Msa1273650 MtrunA17_Chr1g0163371 33.161 193 120 4 315 501 12 201 9.76e-24 99.8
Msa1273650 MtrunA17_Chr2g0293411 25.259 483 292 20 9 472 6 438 1.47e-23 103
Msa1273650 MtrunA17_Chr8g0364631 23.800 500 335 13 46 524 32 506 2.44e-23 103
Msa1273650 MtrunA17_Chr4g0076171 34.375 192 93 6 341 523 1 168 3.00e-23 96.7
Msa1273650 MtrunA17_Chr1g0203141 23.448 435 287 12 69 491 84 484 3.60e-23 102
Msa1273650 MtrunA17_Chr6g0463611 27.236 246 164 4 41 284 44 276 4.32e-23 100
Msa1273650 MtrunA17_Chr5g0445411 36.154 130 83 0 46 175 45 174 4.63e-23 96.3
Msa1273650 MtrunA17_Chr6g0458571 41.228 114 60 2 11 124 26 132 6.62e-23 94.4
Msa1273650 MtrunA17_Chr1g0163281 28.000 250 163 4 262 501 256 498 1.52e-22 101
Msa1273650 MtrunA17_Chr1g0163421 28.163 245 153 6 272 501 283 519 1.85e-22 100
Msa1273650 MtrunA17_Chr5g0444981 40.268 149 85 3 344 492 30 174 2.17e-22 95.5
Msa1273650 MtrunA17_Chr1g0163491 29.537 281 185 6 231 501 223 500 5.86e-22 99.4
Msa1273650 MtrunA17_Chr4g0028321 35.484 124 75 2 393 513 25 146 1.54e-21 91.7
Msa1273650 MtrunA17_Chr5g0445361 37.705 122 70 3 399 517 12 130 1.92e-21 90.5
Msa1273650 MtrunA17_Chr4g0063221 23.709 426 277 13 79 489 94 486 4.43e-21 96.7
Msa1273650 MtrunA17_Chr1g0179811 28.634 227 133 4 283 509 329 526 1.15e-20 95.5
Msa1273650 MtrunA17_Chr5g0429651 25.553 407 259 16 137 524 127 508 1.38e-20 95.1
Msa1273650 MtrunA17_Chr1g0183611 25.797 345 234 12 171 501 68 404 1.75e-20 94.0
Msa1273650 MtrunA17_Chr1g0203151 26.866 268 174 9 262 523 259 510 4.86e-20 93.2
Msa1273650 MtrunA17_Chr6g0484771 39.844 128 72 2 83 209 1 124 1.01e-19 85.9
Msa1273650 MtrunA17_Chr2g0310371 38.017 121 73 2 45 165 27 145 1.19e-19 85.9
Msa1273650 MtrunA17_Chr3g0105751 27.915 283 195 6 45 324 46 322 1.34e-19 90.9
Msa1273650 MtrunA17_Chr1g0171041 28.115 313 194 11 228 513 197 505 1.39e-19 92.0
Msa1273650 MtrunA17_Chr1g0163461 26.971 241 155 5 272 498 262 495 1.57e-19 91.7
Msa1273650 MtrunA17_Chr3g0128461 24.605 443 282 17 67 494 91 496 1.65e-19 91.7
Msa1273650 MtrunA17_Chr8g0336361 24.536 485 276 19 62 494 84 530 2.37e-19 91.3
Msa1273650 MtrunA17_Chr1g0163391 26.757 370 230 15 175 524 154 502 3.32e-19 90.9
Msa1273650 MtrunA17_Chr8g0339861 25.403 496 278 23 6 472 5 437 8.72e-19 89.4
Msa1273650 MtrunA17_Chr2g0293421 23.992 471 300 19 36 493 35 460 9.88e-19 89.4
Msa1273650 MtrunA17_Chr7g0248991 31.073 177 92 5 284 460 221 367 1.69e-18 87.4
Msa1273650 MtrunA17_Chr5g0431631 37.500 112 70 0 46 157 50 161 2.37e-18 82.4
Msa1273650 MtrunA17_Chr1g0163211 28.800 250 163 6 279 524 263 501 2.80e-18 87.8
Msa1273650 MtrunA17_Chr6g0472221 22.902 441 293 16 63 491 90 495 3.10e-18 87.8
Msa1273650 MtrunA17_Chr6g0479681 22.965 479 314 18 67 523 83 528 3.37e-18 87.8
Msa1273650 MtrunA17_Chr8g0351401 25.132 378 237 16 137 491 124 478 6.89e-18 86.7
Msa1273650 MtrunA17_Chr1g0163511 29.231 195 130 4 313 501 306 498 8.23e-18 86.7
Msa1273650 MtrunA17_Chr1g0184461 28.342 187 128 4 310 493 290 473 8.36e-18 86.3
Msa1273650 MtrunA17_Chr4g0004481 25.292 257 179 5 271 522 242 490 1.44e-17 85.5
Msa1273650 MtrunA17_Chr8g0381571 27.468 233 142 7 252 476 231 444 2.21e-17 84.7
Msa1273650 MtrunA17_Chr4g0030761 34.641 153 71 6 376 517 1 135 2.23e-17 79.3
Msa1273650 MtrunA17_Chr8g0381541 27.468 233 142 7 252 476 231 444 2.71e-17 84.7
Msa1273650 MtrunA17_Chr3g0107561 25.658 304 209 7 6 302 7 300 3.98e-17 82.8
Msa1273650 MtrunA17_Chr1g0163351 28.054 221 146 5 311 524 291 505 4.35e-17 84.3
Msa1273650 MtrunA17_Chr8g0364081 21.705 516 350 17 9 495 24 514 7.47e-17 83.6
Msa1273650 MtrunA17_Chr8g0372591 29.752 121 85 0 325 445 3 123 7.68e-17 77.4
Msa1273650 MtrunA17_Chr6g0449331 22.162 370 254 15 175 524 160 515 8.00e-17 83.6
Msa1273650 MtrunA17_Chr8g0371761 28.767 146 93 1 344 478 1 146 9.33e-17 77.4
Msa1273650 MtrunA17_Chr1g0204271 24.731 372 236 14 137 488 124 471 1.98e-16 82.0
Msa1273650 MtrunA17_Chr3g0117321 35.398 113 71 1 53 165 14 124 2.23e-16 75.5
Msa1273650 MtrunA17_Chr1g0154731 21.445 429 295 13 71 492 80 473 2.43e-16 81.6
Msa1273650 MtrunA17_Chr8g0351391 23.797 374 242 12 137 491 130 479 2.48e-16 81.6
Msa1273650 MtrunA17_Chr8g0369791 26.124 467 269 27 35 483 24 432 3.13e-16 81.3
Msa1273650 MtrunA17_Chr1g0163501 28.718 195 131 4 315 503 288 480 3.38e-16 81.3
Msa1273650 MtrunA17_Chr1g0163431 28.085 235 156 5 228 450 161 394 3.53e-16 80.9
Msa1273650 MtrunA17_Chr5g0400421 28.387 155 99 3 323 473 296 442 4.23e-16 80.9
Msa1273650 MtrunA17_Chr5g0400411 27.861 201 130 5 277 473 252 441 4.81e-16 80.9
Msa1273650 MtrunA17_Chr2g0308651 28.495 186 126 4 310 492 204 385 8.07e-16 79.7
Msa1273650 MtrunA17_Chr2g0288661 23.462 439 286 18 67 491 85 487 1.42e-15 79.3
Msa1273650 MtrunA17_Chr1g0184421 27.273 187 130 4 310 493 290 473 1.99e-15 79.0
Msa1273650 MtrunA17_Chr2g0313771 23.744 438 291 17 67 492 87 493 2.48e-15 78.6
Msa1273650 MtrunA17_Chr7g0227281 22.636 349 249 9 182 524 161 494 2.72e-15 78.6
Msa1273650 MtrunA17_Chr4g0046651 33.333 105 59 3 130 228 1 100 2.73e-15 72.4
Msa1273650 MtrunA17_Chr6g0472171 33.913 115 71 3 379 492 18 128 4.85e-15 72.8
Msa1273650 MtrunA17_Chr1g0163401 28.638 213 142 5 318 524 304 512 6.32e-15 77.4
Msa1273650 MtrunA17_Chr1g0164321 24.335 263 178 8 285 533 301 556 6.75e-15 77.4
Msa1273650 MtrunA17_Chr6g0449341 27.941 204 137 7 327 524 364 563 7.73e-15 77.4
Msa1273650 MtrunA17_Chr8g0380471 27.309 249 161 6 281 523 241 475 9.43e-15 76.6
Msa1273650 MtrunA17_Chr4g0076181 43.678 87 46 1 85 171 3 86 1.16e-14 72.0
Msa1273650 MtrunA17_Chr6g0449361 21.429 378 269 12 163 524 138 503 1.45e-14 76.3
Msa1273650 MtrunA17_Chr1g0182861 32.479 117 74 3 379 494 23 135 1.92e-14 71.2
Msa1273650 MtrunA17_Chr5g0431601 38.272 81 49 1 85 165 3 82 2.47e-14 68.6
Msa1273650 MtrunA17_Chr8g0351311 23.360 381 236 15 137 491 130 480 2.53e-14 75.5
Msa1273650 MtrunA17_Chr7g0260831 26.203 187 132 4 310 493 288 471 2.66e-14 75.5
Msa1273650 MtrunA17_Chr4g0038271 23.372 261 180 6 285 533 317 569 3.93e-14 75.1
Msa1273650 MtrunA17_Chr2g0307291 25.333 375 229 17 137 492 146 488 4.34e-14 74.7
Msa1273650 MtrunA17_Chr2g0321171 23.702 443 290 16 90 519 86 493 6.72e-14 74.3
Msa1273650 MtrunA17_Chr8g0387001 24.439 401 271 14 137 524 124 505 9.85e-14 73.6
Msa1273650 MtrunA17_Chr6g0449351 21.690 355 244 15 164 498 99 439 1.50e-13 72.8
Msa1273650 MtrunA17_Chr8g0372711 27.136 199 132 5 297 491 265 454 1.54e-13 73.2
Msa1273650 MtrunA17_Chr8g0372341 27.215 158 114 1 54 210 52 209 1.92e-13 69.7
Msa1273650 MtrunA17_Chr3g0089351 27.064 218 137 7 278 491 166 365 2.33e-13 72.0
Msa1273650 MtrunA17_Chr4g0056981 40.278 72 43 0 351 422 1 72 2.43e-13 65.1
Msa1273650 MtrunA17_Chr5g0430051 42.529 87 47 3 40 126 33 116 3.27e-13 66.2
Msa1273650 MtrunA17_Chr7g0260821 26.203 187 132 4 310 493 289 472 3.82e-13 71.6
Msa1273650 MtrunA17_Chr1g0193811 22.152 474 311 17 67 523 83 515 4.45e-13 71.6
Msa1273650 MtrunA17_Chr7g0262111 24.654 434 280 16 67 492 81 475 6.22e-13 71.2
Msa1273650 MtrunA17_Chr7g0227291 20.718 362 263 10 171 524 149 494 6.45e-13 71.2
Msa1273650 MtrunA17_Chr8g0348751 28.804 184 118 6 318 489 296 478 1.11e-12 70.5
Msa1273650 MtrunA17_Chr5g0443731 21.896 443 292 17 45 476 28 427 1.19e-12 70.1
Msa1273650 MtrunA17_Chr4g0026941 25.417 240 156 9 262 493 285 509 2.51e-12 69.3
Msa1273650 MtrunA17_Chr8g0372331 29.688 128 88 2 404 530 3 129 2.57e-12 64.3
Msa1273650 MtrunA17_Chr8g0351461 23.483 379 256 13 137 498 123 484 2.92e-12 68.9
Msa1273650 MtrunA17_Chr6g0449381 23.602 322 216 14 181 487 165 471 3.44e-12 68.9
Msa1273650 MtrunA17_Chr5g0445341 36.585 82 51 1 85 165 3 84 6.29e-12 61.6
Msa1273650 MtrunA17_Chr4g0067191 22.762 391 235 15 137 485 113 478 7.89e-12 67.8
Msa1273650 MtrunA17_Chr8g0351441 23.421 380 255 13 137 498 123 484 2.95e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1273650 AT3G25180.1 48.503 501 247 5 33 533 26 515 6.37e-172 496
Msa1273650 AT4G31970.1 48.163 490 248 5 47 530 33 522 5.00e-166 481
Msa1273650 AT4G31940.1 48.065 491 248 5 47 530 33 523 2.18e-163 474
Msa1273650 AT4G31950.1 44.603 491 253 6 47 530 33 511 1.67e-140 416
Msa1273650 AT2G25160.1 38.619 536 307 8 1 531 1 519 1.19e-121 368
Msa1273650 AT3G25180.2 46.032 378 196 4 33 410 26 395 9.43e-116 348
Msa1273650 AT4G37320.1 37.121 528 288 13 1 524 1 488 7.67e-111 339
Msa1273650 AT4G37370.1 39.175 485 264 12 44 524 29 486 3.92e-107 329
Msa1273650 AT5G07990.1 36.090 532 307 11 5 530 4 508 9.78e-105 324
Msa1273650 AT4G37430.1 36.140 487 281 10 46 524 28 492 7.91e-104 321
Msa1273650 AT4G37310.1 35.656 488 295 7 42 524 27 500 6.81e-103 319
Msa1273650 AT2G23190.1 39.113 496 269 12 36 524 63 532 9.54e-103 320
Msa1273650 AT4G37360.1 37.810 484 274 9 44 524 29 488 7.23e-101 313
Msa1273650 AT4G37330.1 35.260 519 296 10 8 524 5 485 3.69e-100 311
Msa1273650 AT4G37340.1 36.756 487 276 10 44 524 29 489 5.35e-100 311
Msa1273650 AT4G37400.1 36.017 472 276 9 56 524 41 489 6.01e-99 308
Msa1273650 AT5G67310.1 33.855 511 300 8 9 517 18 492 1.04e-98 308
Msa1273650 AT5G36220.1 33.969 524 305 13 7 524 6 494 1.95e-96 302
Msa1273650 AT4G37410.1 34.917 484 283 12 47 524 32 489 4.41e-93 293
Msa1273650 AT2G23220.1 38.852 453 247 11 44 492 45 471 1.61e-92 292
Msa1273650 AT3G28740.1 37.449 486 273 12 44 524 38 497 9.07e-91 287
Msa1273650 AT5G57220.1 35.181 469 277 9 46 513 30 472 7.61e-90 285
Msa1273650 AT2G42250.1 32.505 483 307 7 40 517 35 503 2.41e-87 279
Msa1273650 AT2G25160.2 37.713 411 237 6 1 408 1 395 2.65e-83 265
Msa1273650 AT5G06900.1 31.836 512 317 9 6 517 6 485 1.07e-82 266
Msa1273650 AT4G12320.1 35.052 485 295 11 46 525 42 511 1.94e-82 266
Msa1273650 AT1G01280.1 30.886 463 311 4 70 530 54 509 2.02e-80 260
Msa1273650 AT3G26330.1 32.186 494 307 11 43 529 28 500 4.26e-79 257
Msa1273650 AT4G12300.1 32.869 502 307 10 37 525 25 509 5.04e-79 257
Msa1273650 AT1G66540.1 36.962 395 222 9 134 524 4 375 3.71e-77 248
Msa1273650 AT3G26300.1 30.561 517 324 12 14 523 6 494 4.83e-77 251
Msa1273650 AT3G48280.1 31.048 496 304 11 39 525 23 489 5.71e-77 251
Msa1273650 AT3G48270.1 32.432 481 289 15 44 517 30 481 2.96e-76 249
Msa1273650 AT3G48310.1 30.608 477 298 12 47 517 33 482 1.58e-75 247
Msa1273650 AT4G12310.1 32.292 480 295 8 56 525 54 513 3.12e-75 247
Msa1273650 AT5G04330.1 32.091 483 304 11 52 525 38 505 9.87e-75 246
Msa1273650 AT2G45560.1 32.432 481 290 12 53 520 45 503 1.37e-74 245
Msa1273650 AT4G31500.1 31.799 478 307 10 45 517 28 491 1.53e-74 245
Msa1273650 AT2G40890.1 30.242 496 322 10 45 533 26 504 1.83e-74 245
Msa1273650 AT5G10610.1 28.862 492 323 10 35 523 22 489 2.36e-74 244
Msa1273650 AT3G26290.1 31.743 482 302 11 43 517 29 490 2.46e-74 244
Msa1273650 AT3G26290.2 31.743 482 302 11 43 517 42 503 4.25e-74 244
Msa1273650 AT3G26310.1 30.645 496 311 13 42 525 21 495 9.71e-74 243
Msa1273650 AT5G57260.1 30.977 481 303 12 47 517 32 493 1.08e-73 243
Msa1273650 AT5G44620.1 33.047 466 293 9 55 517 55 504 4.30e-73 241
Msa1273650 AT3G32047.1 32.522 452 283 11 57 505 53 485 6.39e-73 241
Msa1273650 AT3G48300.1 30.913 482 300 13 44 520 25 478 8.75e-73 239
Msa1273650 AT3G48300.2 30.913 482 300 13 44 520 27 480 9.21e-73 239
Msa1273650 AT1G74550.1 31.743 482 292 12 55 530 36 486 2.09e-72 239
Msa1273650 AT3G26320.1 30.470 489 312 11 42 523 27 494 3.01e-72 239
Msa1273650 AT5G10600.1 28.157 483 321 9 45 523 45 505 4.80e-72 239
Msa1273650 AT4G13310.1 31.198 484 303 12 42 517 29 490 8.37e-72 238
Msa1273650 AT2G14100.1 31.933 476 302 10 57 528 54 511 1.02e-71 238
Msa1273650 AT3G48290.1 30.913 482 301 12 44 520 32 486 1.18e-71 237
Msa1273650 AT5G25120.1 31.933 476 294 12 53 520 36 489 2.66e-71 236
Msa1273650 AT2G30770.1 30.498 482 300 13 46 517 33 489 1.38e-70 234
Msa1273650 AT4G36220.1 30.738 488 303 11 54 525 48 516 1.34e-69 232
Msa1273650 AT4G22710.1 30.021 473 311 9 56 525 63 518 1.40e-69 233
Msa1273650 AT1G13080.1 30.943 488 303 15 46 520 31 497 1.63e-69 232
Msa1273650 AT3G48320.1 30.705 482 291 11 47 517 33 482 2.69e-69 231
Msa1273650 AT5G25140.1 31.202 516 316 15 15 520 3 489 3.18e-69 231
Msa1273650 AT1G50520.1 31.263 483 310 12 56 532 53 519 4.40e-69 231
Msa1273650 AT4G13290.1 30.228 483 306 11 40 517 27 483 5.73e-69 230
Msa1273650 AT5G25130.1 31.656 477 294 12 53 520 36 489 9.57e-69 229
Msa1273650 AT4G22690.1 30.197 457 300 8 72 525 109 549 1.40e-68 231
Msa1273650 AT5G25180.1 32.025 484 297 12 46 520 29 489 1.87e-68 229
Msa1273650 AT3G20110.1 30.126 478 304 11 52 524 45 497 2.10e-68 229
Msa1273650 AT3G26270.1 30.928 485 295 11 46 511 32 495 3.80e-68 228
Msa1273650 AT2G45570.1 32.700 474 293 12 56 520 48 504 1.53e-67 227
Msa1273650 AT2G45550.1 30.417 480 309 10 46 517 38 500 2.22e-67 226
Msa1273650 AT3G48290.2 29.724 508 299 14 44 520 32 512 3.62e-67 226
Msa1273650 AT2G30750.1 30.309 485 309 13 40 517 27 489 6.23e-67 224
Msa1273650 AT4G15350.1 31.656 477 298 12 57 524 45 502 7.21e-67 225
Msa1273650 AT4G12330.1 30.538 465 303 9 56 517 56 503 9.35e-67 225
Msa1273650 AT4G15330.1 29.810 473 306 11 41 508 34 485 1.05e-66 224
Msa1273650 AT4G39950.1 30.241 539 344 15 5 533 24 540 1.47e-66 225
Msa1273650 AT3G26280.1 30.444 496 308 12 46 527 32 504 2.47e-66 223
Msa1273650 AT5G24950.1 29.532 491 310 13 40 519 26 491 2.48e-66 223
Msa1273650 AT3G26280.2 30.444 496 308 12 46 527 49 521 3.09e-66 223
Msa1273650 AT5G42590.1 30.385 520 321 13 9 519 5 492 4.46e-66 223
Msa1273650 AT4G39950.2 30.241 539 344 15 5 533 64 580 4.53e-66 224
Msa1273650 AT3G20940.1 29.938 481 310 13 46 518 42 503 5.07e-66 223
Msa1273650 AT1G11610.1 29.916 478 308 11 46 517 33 489 7.15e-66 222
Msa1273650 AT3G20130.1 30.083 482 301 13 57 526 53 510 7.28e-66 222
Msa1273650 AT2G22330.1 30.143 491 324 8 5 491 25 500 9.54e-66 223
Msa1273650 AT2G24180.1 28.601 479 318 10 46 520 36 494 1.45e-65 221
Msa1273650 AT3G20140.1 30.189 477 313 10 46 520 42 500 1.65e-65 221
Msa1273650 AT2G22330.2 30.143 491 324 8 5 491 48 523 1.82e-65 223
Msa1273650 AT1G11610.2 29.895 475 306 11 46 514 33 486 2.27e-65 221
Msa1273650 AT1G13090.2 31.140 456 286 10 45 492 27 462 3.04e-65 220
Msa1273650 AT3G61040.1 31.489 470 285 11 60 517 45 489 6.93e-65 219
Msa1273650 AT3G20120.4 30.526 475 303 12 57 524 52 506 9.48e-65 219
Msa1273650 AT4G13770.1 29.607 483 317 11 45 520 29 495 1.25e-64 219
Msa1273650 AT1G50560.1 30.544 478 304 12 57 525 54 512 6.37e-64 217
Msa1273650 AT3G20950.1 30.000 480 306 12 54 524 54 512 6.49e-64 218
Msa1273650 AT1G13110.1 29.490 451 302 8 45 492 31 468 8.15e-64 216
Msa1273650 AT3G20090.2 30.361 471 310 11 57 524 54 509 1.20e-63 217
Msa1273650 AT1G66540.2 35.714 336 195 6 190 524 1 316 4.51e-63 209
Msa1273650 AT5G47990.1 29.299 471 314 9 57 524 53 507 7.91e-63 214
Msa1273650 AT1G33720.1 29.014 517 332 13 9 517 11 500 8.78e-63 214
Msa1273650 AT3G26200.1 30.785 497 312 13 39 523 21 497 1.65e-62 213
Msa1273650 AT3G26230.1 30.738 488 312 15 42 520 23 493 5.43e-62 211
Msa1273650 AT5G06905.1 28.875 471 306 9 40 496 25 480 7.79e-62 212
Msa1273650 AT2G02580.1 30.309 518 322 17 15 523 7 494 1.20e-61 211
Msa1273650 AT3G20100.1 30.417 480 305 13 56 526 51 510 1.55e-61 211
Msa1273650 AT2G45580.1 29.386 456 300 9 70 517 60 501 2.84e-61 210
Msa1273650 AT3G26190.1 29.918 488 316 11 42 520 24 494 3.93e-61 209
Msa1273650 AT3G44250.1 31.707 492 304 13 42 522 24 494 9.70e-61 208
Msa1273650 AT1G13710.1 28.778 483 316 15 46 524 54 512 1.51e-60 208
Msa1273650 AT3G52970.1 29.495 495 320 12 43 523 33 512 2.41e-60 207
Msa1273650 AT3G26210.1 29.512 471 311 10 56 520 41 496 7.84e-60 206
Msa1273650 AT3G26170.1 28.986 483 310 10 46 511 30 496 8.01e-60 206
Msa1273650 AT2G46660.1 28.660 485 317 11 44 524 69 528 1.35e-59 206
Msa1273650 AT3G26180.1 29.388 490 311 11 41 511 23 496 1.40e-59 205
Msa1273650 AT5G05260.2 28.651 541 350 15 10 532 7 529 1.45e-59 206
Msa1273650 AT4G15360.1 29.053 475 318 12 46 517 40 498 1.59e-59 206
Msa1273650 AT3G61880.1 30.321 498 315 14 32 524 59 529 3.11e-59 205
Msa1273650 AT1G74540.1 27.715 534 310 11 5 518 3 480 3.55e-59 204
Msa1273650 AT3G61880.2 30.321 498 315 14 32 524 59 529 5.15e-59 205
Msa1273650 AT5G24960.1 29.752 484 314 12 46 523 33 496 1.59e-58 202
Msa1273650 AT3G20080.2 31.504 492 306 12 43 524 39 509 3.64e-58 202
Msa1273650 AT3G20080.1 31.504 492 306 12 43 524 39 509 3.64e-58 202
Msa1273650 AT3G26830.1 30.131 458 288 11 45 492 27 462 4.60e-58 201
Msa1273650 AT3G26220.1 30.061 489 321 10 39 520 22 496 6.27e-58 201
Msa1273650 AT5G36220.2 33.234 337 205 6 188 524 32 348 1.06e-57 196
Msa1273650 AT1G13100.1 29.004 462 307 9 55 511 37 482 1.31e-57 200
Msa1273650 AT1G74110.1 28.455 492 320 15 46 524 64 536 2.18e-57 200
Msa1273650 AT3G52970.2 28.515 505 326 12 43 523 33 526 3.37e-57 199
Msa1273650 AT3G20130.2 30.394 431 265 12 108 526 75 482 3.56e-57 198
Msa1273650 AT3G20960.2 29.913 458 294 12 75 524 69 507 6.82e-57 199
Msa1273650 AT4G15330.2 28.541 473 284 12 41 508 34 457 7.33e-57 197
Msa1273650 AT2G27000.1 29.536 474 311 13 57 524 50 506 8.14e-57 198
Msa1273650 AT5G35715.1 29.605 456 291 12 85 529 3 439 3.82e-56 194
Msa1273650 AT1G28430.1 27.848 474 321 10 57 525 51 508 6.56e-56 196
Msa1273650 AT3G26150.1 28.629 496 307 15 41 511 23 496 9.90e-55 192
Msa1273650 AT3G53280.1 29.435 496 306 14 42 520 24 492 1.10e-54 192
Msa1273650 AT5G42580.1 29.204 452 291 10 70 518 62 487 1.54e-54 192
Msa1273650 AT3G53300.1 29.697 495 312 12 45 526 27 498 2.06e-54 191
Msa1273650 AT3G26160.1 29.039 489 302 15 46 511 30 496 1.14e-53 189
Msa1273650 AT1G01190.1 27.778 486 320 14 44 524 72 531 1.46e-53 190
Msa1273650 AT1G01190.2 27.778 486 320 14 44 524 77 536 2.46e-53 189
Msa1273650 AT5G05260.1 27.307 531 334 13 14 532 7 497 2.50e-53 188
Msa1273650 AT2G30490.1 29.828 466 298 13 70 524 56 503 6.71e-53 187
Msa1273650 AT5G09970.1 29.184 490 306 17 46 521 70 532 1.48e-51 184
Msa1273650 AT1G58260.1 26.063 541 370 10 4 533 7 528 2.06e-51 184
Msa1273650 AT4G15380.1 28.602 465 305 12 75 533 70 513 2.25e-51 184
Msa1273650 AT1G16410.1 26.740 546 362 16 3 530 8 533 2.88e-51 184
Msa1273650 AT3G20960.1 30.000 420 267 12 113 524 4 404 7.03e-51 180
Msa1273650 AT1G16400.1 26.852 540 361 16 7 530 11 532 2.12e-50 181
Msa1273650 AT4G13310.2 30.159 378 247 7 42 418 29 390 6.90e-50 176
Msa1273650 AT2G05180.1 28.934 394 255 9 57 444 52 426 1.70e-49 177
Msa1273650 AT1G79370.1 26.978 556 353 19 7 533 10 541 4.69e-49 178
Msa1273650 AT3G20120.2 30.334 389 245 11 143 524 1 370 5.52e-49 174
Msa1273650 AT3G20120.3 30.334 389 245 11 143 524 1 370 5.52e-49 174
Msa1273650 AT3G20120.1 30.334 389 245 11 143 524 1 370 5.52e-49 174
Msa1273650 AT5G04660.1 26.013 469 324 9 64 525 60 512 2.94e-48 175
Msa1273650 AT3G20090.1 29.870 385 253 10 143 524 1 371 2.27e-47 169
Msa1273650 AT3G10560.1 24.131 489 349 11 42 525 42 513 9.54e-47 171
Msa1273650 AT5G04630.1 25.678 479 334 10 54 525 46 509 2.45e-46 169
Msa1273650 AT4G20240.1 28.993 407 259 10 45 444 32 415 2.67e-46 168
Msa1273650 AT1G33720.4 29.058 382 249 8 143 517 2 368 1.69e-45 164
Msa1273650 AT1G33720.3 29.058 382 249 8 143 517 2 368 1.69e-45 164
Msa1273650 AT1G33720.5 29.058 382 249 8 143 517 2 368 1.69e-45 164
Msa1273650 AT2G45580.2 28.691 359 231 9 167 517 6 347 7.05e-45 162
Msa1273650 AT1G13080.2 28.497 386 244 13 148 520 13 379 1.06e-44 162
Msa1273650 AT2G27010.1 27.673 477 298 14 57 524 46 484 1.60e-44 164
Msa1273650 AT3G20080.4 29.668 391 247 11 143 524 1 372 2.46e-44 161
Msa1273650 AT3G20080.5 29.668 391 247 11 143 524 1 372 2.46e-44 161
Msa1273650 AT3G20080.6 29.668 391 247 11 143 524 1 372 2.46e-44 161
Msa1273650 AT3G20080.3 29.668 391 247 11 143 524 1 372 2.46e-44 161
Msa1273650 AT3G20935.1 28.909 339 206 11 213 524 4 334 2.97e-44 160
Msa1273650 AT1G33720.2 28.465 404 248 9 143 517 2 393 3.05e-44 161
Msa1273650 AT1G33730.1 29.787 376 240 10 150 517 5 364 4.17e-44 160
Msa1273650 AT1G33730.2 29.787 376 240 10 150 517 5 364 4.17e-44 160
Msa1273650 AT5G25900.1 25.510 490 317 12 52 524 49 507 4.94e-44 163
Msa1273650 AT3G10570.1 25.376 465 323 10 68 525 66 513 4.38e-43 160
Msa1273650 AT1G64940.1 24.673 535 352 15 9 524 6 508 1.34e-40 154
Msa1273650 AT1G64930.1 26.104 498 328 14 46 524 32 508 3.01e-39 150
Msa1273650 AT5G35917.1 26.448 518 306 18 35 532 28 490 1.51e-36 142
Msa1273650 AT1G11600.1 24.395 496 337 14 46 524 35 509 1.77e-36 142
Msa1273650 AT3G61040.2 28.455 369 233 8 60 419 45 391 3.15e-36 139
Msa1273650 AT1G64950.1 24.540 489 343 12 47 524 34 507 1.95e-35 139
Msa1273650 AT4G20240.2 27.368 380 247 9 45 418 32 388 2.31e-35 137
Msa1273650 AT5G24960.2 28.457 376 250 9 46 419 33 391 6.81e-35 135
Msa1273650 AT2G45580.3 26.836 354 243 7 70 418 60 402 7.74e-34 133
Msa1273650 AT3G03470.1 22.863 503 356 12 38 524 23 509 7.99e-34 134
Msa1273650 AT3G26180.2 30.075 266 164 5 260 511 105 362 1.07e-33 132
Msa1273650 AT2G12190.1 24.894 470 329 12 47 505 34 490 1.87e-33 134
Msa1273650 AT1G16410.2 25.472 424 284 12 3 412 8 413 1.64e-32 129
Msa1273650 AT1G64900.1 23.819 487 335 14 53 524 38 503 9.21e-31 125
Msa1273650 AT5G61320.1 25.053 471 302 13 68 524 54 487 1.89e-30 124
Msa1273650 AT3G53290.1 27.336 428 266 12 101 520 11 401 1.30e-29 120
Msa1273650 AT2G26170.1 24.569 464 311 12 46 491 46 488 4.94e-29 120
Msa1273650 AT1G31800.1 25.000 480 322 14 66 528 126 584 1.45e-27 117
Msa1273650 AT3G53130.1 30.263 228 128 5 283 509 329 526 1.31e-24 107
Msa1273650 AT4G15110.1 31.132 212 117 7 323 507 354 563 1.89e-23 104
Msa1273650 AT1G13090.1 28.996 269 169 7 45 308 27 278 7.34e-23 99.4
Msa1273650 AT5G24900.1 25.400 437 285 17 69 491 87 496 8.66e-23 102
Msa1273650 AT5G02900.1 26.871 294 183 12 247 514 192 479 1.71e-22 100
Msa1273650 AT2G26170.2 28.992 238 159 4 261 491 171 405 2.55e-22 100
Msa1273650 AT2G26710.1 24.524 420 286 12 79 494 95 487 4.55e-22 100
Msa1273650 AT2G45560.2 28.731 268 166 9 53 310 45 297 8.60e-22 96.7
Msa1273650 AT4G39480.1 26.772 254 165 6 261 498 241 489 1.43e-21 98.6
Msa1273650 AT3G14610.1 25.175 429 277 16 75 492 87 482 3.76e-21 97.1
Msa1273650 AT5G52400.1 29.020 255 164 9 265 511 269 514 3.92e-21 97.1
Msa1273650 AT5G24900.2 33.540 161 101 4 332 491 224 379 1.04e-20 95.1
Msa1273650 AT1G24540.1 25.194 258 173 6 281 524 269 520 3.56e-20 94.4
Msa1273650 AT5G52320.2 28.514 249 164 7 258 498 236 478 6.62e-20 93.2
Msa1273650 AT5G52320.1 28.514 249 164 7 258 498 236 478 6.77e-20 93.2
Msa1273650 AT4G39490.1 21.867 407 264 11 137 511 121 505 1.03e-19 92.8
Msa1273650 AT1G57750.1 24.681 235 165 4 281 511 259 485 1.09e-19 92.4
Msa1273650 AT4G32170.1 21.750 400 283 14 138 524 121 503 1.15e-19 92.4
Msa1273650 AT2G45560.3 31.100 209 125 7 53 255 45 240 1.46e-19 88.6
Msa1273650 AT3G14640.1 24.941 425 282 17 75 491 88 483 1.57e-19 92.0
Msa1273650 AT3G14640.2 24.941 425 282 17 75 491 110 505 1.97e-19 92.0
Msa1273650 AT3G14660.1 24.057 424 287 16 75 492 88 482 6.89e-19 90.1
Msa1273650 AT3G53305.1 32.984 191 108 4 315 505 139 309 1.05e-18 87.8
Msa1273650 AT4G27710.1 23.028 469 311 15 69 523 84 516 1.52e-18 89.4
Msa1273650 AT2G46950.1 22.467 454 312 13 78 523 148 569 1.74e-18 89.4
Msa1273650 AT3G14620.1 24.863 366 234 15 137 491 149 484 2.23e-18 88.6
Msa1273650 AT2G23180.1 23.509 285 191 9 247 511 224 501 2.25e-18 88.6
Msa1273650 AT1G65340.1 25.490 255 174 5 261 507 242 488 2.47e-18 88.6
Msa1273650 AT3G14650.1 24.823 423 285 15 75 492 88 482 4.00e-18 87.8
Msa1273650 AT4G39510.1 24.221 289 203 8 247 524 222 505 4.24e-18 87.8
Msa1273650 AT2G42850.1 22.075 453 292 11 52 492 51 454 7.09e-18 87.0
Msa1273650 AT3G14630.1 23.889 360 248 10 137 492 141 478 8.12e-18 87.0
Msa1273650 AT2G45510.1 25.290 431 264 18 88 491 77 476 8.43e-18 86.7
Msa1273650 AT3G14660.2 23.765 324 216 10 178 494 39 338 1.29e-17 85.1
Msa1273650 AT3G14630.2 23.889 360 248 10 137 492 196 533 1.36e-17 86.3
Msa1273650 AT3G14680.1 24.377 361 245 11 137 492 145 482 1.85e-17 85.9
Msa1273650 AT1G19630.3 21.932 497 320 18 8 491 3 444 2.06e-17 85.1
Msa1273650 AT1G19630.1 22.200 491 314 18 14 491 9 444 2.24e-17 85.5
Msa1273650 AT1G13150.1 27.074 229 142 6 285 495 269 490 3.95e-17 84.7
Msa1273650 AT5G45340.1 24.486 486 297 20 46 522 36 460 4.29e-17 84.3
Msa1273650 AT5G35920.1 30.769 156 97 3 382 532 6 155 4.49e-17 79.0
Msa1273650 AT2G21910.1 22.338 385 256 14 140 502 123 486 6.34e-17 84.0
Msa1273650 AT1G05160.2 24.153 443 282 19 42 472 41 441 9.22e-17 83.6
Msa1273650 AT1G05160.1 24.153 443 282 19 42 472 41 441 9.22e-17 83.6
Msa1273650 AT1G47620.1 22.553 235 175 4 293 524 285 515 3.20e-16 82.0
Msa1273650 AT2G27690.1 22.556 399 276 12 137 524 118 494 6.13e-16 80.9
Msa1273650 AT3G26125.1 23.798 416 265 16 140 524 138 532 6.29e-16 81.3
Msa1273650 AT3G19270.2 23.046 499 318 20 6 498 5 443 1.43e-15 79.7
Msa1273650 AT1G13140.1 24.021 383 245 16 137 494 135 496 2.13e-15 79.3
Msa1273650 AT3G14690.2 23.953 430 280 17 75 492 123 517 2.22e-15 79.3
Msa1273650 AT3G14690.1 24.728 368 246 15 132 492 139 482 2.49e-15 79.0
Msa1273650 AT1G13140.2 28.177 181 115 5 325 494 294 470 3.69e-15 78.6
Msa1273650 AT1G19630.2 22.494 449 288 17 8 443 3 404 3.79e-15 78.2
Msa1273650 AT3G19270.1 22.967 492 313 20 6 491 5 436 7.65e-15 77.4
Msa1273650 AT2G46960.2 22.609 460 308 15 78 523 91 516 8.35e-15 77.4
Msa1273650 AT2G46960.1 26.160 237 160 6 292 523 174 400 9.82e-14 73.6
Msa1273650 AT3G56630.1 26.582 237 159 8 262 491 238 466 1.05e-13 73.9
Msa1273650 AT1G34540.1 27.778 216 143 7 283 491 257 466 1.08e-13 73.9
Msa1273650 AT2G34490.1 23.774 265 188 7 259 515 226 484 1.11e-13 73.9
Msa1273650 AT2G32440.2 25.472 212 143 6 294 501 268 468 1.27e-13 73.6
Msa1273650 AT2G32440.1 25.472 212 143 6 294 501 268 468 1.27e-13 73.6
Msa1273650 AT4G00360.1 26.042 288 186 11 261 528 244 524 2.22e-13 73.2
Msa1273650 AT2G28850.1 20.238 504 341 16 39 525 30 489 2.66e-13 72.8
Msa1273650 AT1G57750.2 25.444 169 116 3 281 445 259 421 2.94e-13 72.4
Msa1273650 AT5G08250.1 21.235 405 279 14 140 524 94 478 6.52e-13 71.6
Msa1273650 AT1G63710.1 25.405 370 241 13 137 489 124 475 9.05e-13 71.2
Msa1273650 AT5G08250.2 22.041 245 171 5 294 524 302 540 9.71e-13 71.2
Msa1273650 AT2G45970.1 29.661 236 140 12 272 489 251 478 1.24e-12 70.9
Msa1273650 AT5G23190.1 22.991 448 292 16 80 502 101 520 1.29e-12 70.9
Msa1273650 AT1G55940.2 22.105 475 293 19 45 494 44 466 4.57e-12 68.9
Msa1273650 AT1G01600.1 29.101 189 118 7 315 489 295 481 3.38e-11 66.2
Msa1273650 AT3G50660.1 22.379 496 317 17 33 497 31 489 4.32e-11 65.9
Msa1273650 AT1G67110.1 28.758 153 101 4 346 497 340 485 9.25e-11 64.7

Find 161 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAGATGTGAAGTATTTA+TGG 0.210827 8_3:+7397392 Msa1273650:five_prime_UTR
AATCATATCATTGGCCCTTT+TGG 0.215158 8_3:+7400440 Msa1273650:three_prime_UTR
ATACACTATGTAAGCATATT+TGG 0.247948 8_3:+7400747 Msa1273650:three_prime_UTR
TCCATGCCTCACTATCTTCT+TGG 0.256146 8_3:-7398096 None:intergenic
GTTGAAAAGGTTCTAAAATA+TGG 0.263492 8_3:-7397644 None:intergenic
GAAGATCCATGGAGACTTCT+TGG 0.294394 8_3:-7397433 None:intergenic
CTCTCAGGTTGAAATTCATT+AGG 0.295667 8_3:-7400041 None:intergenic
CCGAAGTGTCTCTTTGATAA+TGG 0.303713 8_3:-7399880 None:intergenic
GGCTTCTCTTATTCCTGTTA+AGG 0.304649 8_3:-7399919 None:intergenic
TCATGTGCTGGTACAACATT+TGG 0.305910 8_3:+7400143 Msa1273650:CDS
AGGCAAATTTCCAAAATAAA+AGG 0.307255 8_3:-7400695 None:intergenic
ATTGTTTGTTTACGTCTATT+AGG 0.313378 8_3:-7397536 None:intergenic
TCAACCATGGCTGAGAAATA+TGG 0.313658 8_3:+7397662 Msa1273650:CDS
ATAATAATTTGAAAATAAAA+AGG 0.320591 8_3:-7397455 None:intergenic
CTTATTCCTGTTAAGGGTGC+TGG 0.321080 8_3:-7399912 None:intergenic
TTGCCCCTTATGGAGATTAT+TGG 0.324571 8_3:+7397843 Msa1273650:CDS
GACCTTCTTCCATAGCTAAA+TGG 0.326991 8_3:-7400122 None:intergenic
GCTTCTCTTATTCCTGTTAA+GGG 0.344767 8_3:-7399918 None:intergenic
CTCGTTTGCTTATTAACCTA+TGG 0.354177 8_3:+7399985 Msa1273650:CDS
ATGAGTTATCGGGACAAATT+CGG 0.356127 8_3:+7400627 Msa1273650:three_prime_UTR
TCTCAGGTTGAAATTCATTA+GGG 0.368158 8_3:-7400040 None:intergenic
TGAGTTATCGGGACAAATTC+GGG 0.370191 8_3:+7400628 Msa1273650:three_prime_UTR
CATGCATGAAGTTCACGATA+TGG 0.372397 8_3:-7397316 None:intergenic
GAGGTGGTGGGGCTTAATTT+TGG 0.373324 8_3:-7400568 None:intergenic
TGATAACTGTCTCCCGTTTG+TGG 0.376192 8_3:-7398378 None:intergenic
TATCTCCCTGCTGCTACATT+AGG 0.376844 8_3:-7397791 None:intergenic
ATAGTGAGGCATGGAGATTA+AGG 0.380205 8_3:+7398104 Msa1273650:CDS
TTGATTGGAGGATGAGTTAT+CGG 0.380277 8_3:+7400616 Msa1273650:three_prime_UTR
TGGGCAGGTAGGAAATTGAT+TGG 0.382001 8_3:+7400601 Msa1273650:three_prime_UTR
TACCCACCAGCACCCTTAAC+AGG 0.382590 8_3:+7399906 Msa1273650:CDS
GGAAGTACAGCAATAACATT+AGG 0.384728 8_3:+7399729 Msa1273650:CDS
CCACAAATCATGGGAGGTGG+TGG 0.385088 8_3:-7400581 None:intergenic
TCCTACCTGCCCACAAATCA+TGG 0.385215 8_3:-7400591 None:intergenic
AGATTTGTCAATGTCGTGTC+GGG 0.388642 8_3:-7400793 None:intergenic
ATGAAATTTGTGGCCACAAA+CGG 0.393133 8_3:+7398365 Msa1273650:CDS
CCAATCTTCTCCCTTAGGCT+TGG 0.398283 8_3:+7397686 Msa1273650:CDS
TGTTGTGCCTTACCTTTCAT+AGG 0.406310 8_3:+7397593 Msa1273650:CDS
AGGTAAGGCACAACATGGTT+CGG 0.407430 8_3:-7397585 None:intergenic
ATATTCTCTCGGGATATTAT+CGG 0.407884 8_3:-7400531 None:intergenic
AAACCTTAGTGGTGAATAGT+AGG 0.408234 8_3:+7397717 Msa1273650:CDS
CCTTTGGATGGTTTATAAGT+AGG 0.410257 8_3:-7399764 None:intergenic
AAAACAAGCACAGCAAGAAT+TGG 0.411036 8_3:+7399791 Msa1273650:CDS
GAAGAGGACTGCTAAGGAAA+TGG 0.412580 8_3:+7398228 Msa1273650:CDS
TACTATTCACCACTAAGGTT+TGG 0.415021 8_3:-7397715 None:intergenic
ACTTTGGCTAGGTTGATTCA+AGG 0.416065 8_3:+7400185 Msa1273650:CDS
CACCACCTCCCATGATTTGT+GGG 0.418636 8_3:+7400582 Msa1273650:three_prime_UTR
AAGTTGCACAATCATCAATA+AGG 0.422709 8_3:-7397492 None:intergenic
CAAACATAGGAAAAGACAAA+TGG 0.425719 8_3:+7399817 Msa1273650:CDS
TGCAAAGGGACCCACAAGTA+TGG 0.429584 8_3:+7400012 Msa1273650:CDS
CCACCACCTCCCATGATTTG+TGG 0.433140 8_3:+7400581 Msa1273650:three_prime_UTR
AATCATCAATAAGGCTAAGA+TGG 0.435832 8_3:-7397483 None:intergenic
GAAGAAGATGATGAAATTTG+TGG 0.436406 8_3:+7398355 Msa1273650:CDS
ATAGTTGGCAAGAGATTTAG+TGG 0.436461 8_3:+7398061 Msa1273650:CDS
ACACCTTCAATCATATCAAC+TGG 0.437436 8_3:-7400236 None:intergenic
TTCGCCAATAATCTCCATAA+GGG 0.440258 8_3:-7397847 None:intergenic
CTTTGGATGGTTTATAAGTA+GGG 0.440861 8_3:-7399763 None:intergenic
ATGCTATTCCTAGCCTAAGT+TGG 0.446932 8_3:+7398176 Msa1273650:CDS
TTTCTCAGCCATGGTTGAAA+AGG 0.451409 8_3:-7397657 None:intergenic
GGTAAGGCACAACATGGTTC+GGG 0.452040 8_3:-7397584 None:intergenic
TCTAGCATTCATGTGGATCA+AGG 0.455837 8_3:-7400715 None:intergenic
GCTCAAAATAATCATATCAT+TGG 0.456381 8_3:+7400431 Msa1273650:three_prime_UTR
TTCCCTACTATTCACCACTA+AGG 0.457474 8_3:-7397720 None:intergenic
CTGTACTTCCTGAGGCTGTA+AGG 0.458373 8_3:-7399716 None:intergenic
AAGATCCATGGAGACTTCTT+GGG 0.459033 8_3:-7397432 None:intergenic
TGGATTTCATTCTTGATAAG+TGG 0.459646 8_3:+7398248 Msa1273650:CDS
ATTCTTATCCTTACAGCCTC+AGG 0.463217 8_3:+7399708 Msa1273650:CDS
ATGGTCCAATCTTCTCCCTT+AGG 0.463960 8_3:+7397681 Msa1273650:CDS
TGAAATTTGTGGCCACAAAC+GGG 0.467992 8_3:+7398366 Msa1273650:CDS
GCAAGTGTTGCATTTGACTT+TGG 0.469819 8_3:+7400169 Msa1273650:CDS
GGTCCCTTTGCAATTTCCAT+AGG 0.473199 8_3:-7400001 None:intergenic
ATTATTGAAAATGAATATGT+AGG 0.474578 8_3:-7397348 None:intergenic
TAGGGTTTGACCATACTTGT+GGG 0.476283 8_3:-7400022 None:intergenic
CTTGAAAATCAAACCAACTT+AGG 0.478835 8_3:-7398189 None:intergenic
TGATCTAGAAACTTGCTCAT+AGG 0.479773 8_3:-7398010 None:intergenic
TGGTTGCAACCAAACCTTAG+TGG 0.483377 8_3:+7397706 Msa1273650:CDS
TTTGGTTGCAACCAAGCCTA+AGG 0.484787 8_3:-7397697 None:intergenic
TTTCGCCAATAATCTCCATA+AGG 0.487721 8_3:-7397848 None:intergenic
ACCTCCCATGATTTGTGGGC+AGG 0.487873 8_3:+7400586 Msa1273650:three_prime_UTR
TAAATGTGCAGATGATTTCA+TGG 0.488450 8_3:+7398312 Msa1273650:CDS
TCAAGACCTAATGTAGCAGC+AGG 0.489816 8_3:+7397785 Msa1273650:CDS
ATTAACGCGCATAACCCAAA+AGG 0.490930 8_3:-7400455 None:intergenic
TATTCTCTCGGGATATTATC+GGG 0.492846 8_3:-7400530 None:intergenic
ACTGATGATTGCCACGTGGC+AGG 0.492990 8_3:+7399942 Msa1273650:CDS
ACAAATCATGGGAGGTGGTG+GGG 0.494534 8_3:-7400579 None:intergenic
ATAATTGTGAAGATGATAGT+TGG 0.499191 8_3:+7398046 Msa1273650:CDS
CTTTAGTGCTTAGAAGATGA+AGG 0.503772 8_3:-7397619 None:intergenic
TTAGGGTTTGACCATACTTG+TGG 0.503962 8_3:-7400023 None:intergenic
AAACATAGGAAAAGACAAAT+GGG 0.507327 8_3:+7399818 Msa1273650:CDS
GGCTTTCATAAAGCTCCAAT+GGG 0.507465 8_3:-7400313 None:intergenic
CTTTGGCTAGGTTGATTCAA+GGG 0.515978 8_3:+7400186 Msa1273650:CDS
CACAAATCATGGGAGGTGGT+GGG 0.518525 8_3:-7400580 None:intergenic
TAACCTATGGAAATTGCAAA+GGG 0.520685 8_3:+7399998 Msa1273650:CDS
TTAACCTATGGAAATTGCAA+AGG 0.523137 8_3:+7399997 Msa1273650:CDS
AGGCTTTCATAAAGCTCCAA+TGG 0.524060 8_3:-7400314 None:intergenic
ATTATCGGGACAATAGTTCT+CGG 0.524735 8_3:-7400516 None:intergenic
TATAATTTCTAGCATTCATG+TGG 0.527236 8_3:-7400722 None:intergenic
TTTGATATAAACACAAAAGA+AGG 0.528739 8_3:+7400209 Msa1273650:CDS
CATGTGCTGGTACAACATTT+GGG 0.530721 8_3:+7400144 Msa1273650:CDS
GTAGCAGCAGGGAGATACTT+AGG 0.534053 8_3:+7397797 Msa1273650:CDS
CACTGAGTAAATATTCTCTC+GGG 0.535399 8_3:-7400541 None:intergenic
TGTAGGATTGGCATTGCCTA+AGG 0.536515 8_3:+7400256 Msa1273650:CDS
ATTCCTGTTAAGGGTGCTGG+TGG 0.537448 8_3:-7399909 None:intergenic
TAGATTTGTCAATGTCGTGT+CGG 0.538462 8_3:-7400794 None:intergenic
TGGACCATATTTCTCAGCCA+TGG 0.538576 8_3:-7397666 None:intergenic
ACACTTGATACAAATATCAA+AGG 0.539549 8_3:-7400334 None:intergenic
TGCTGCTACATTAGGTCTTG+AGG 0.539660 8_3:-7397783 None:intergenic
TGGAGACTTCTTGGGTTGAG+AGG 0.542841 8_3:-7397424 None:intergenic
GCCACGTTGGTTTCATGAAG+AGG 0.545120 8_3:+7398212 Msa1273650:CDS
CCAAGCCTAAGGGAGAAGAT+TGG 0.545200 8_3:-7397686 None:intergenic
TGTTGCATTTGACTTTGGCT+AGG 0.545521 8_3:+7400174 Msa1273650:CDS
GCTGCAACCACGTCTCCCAT+TGG 0.546447 8_3:+7400298 Msa1273650:CDS
GGATATGTGCCATTTAGCTA+TGG 0.551786 8_3:+7400113 Msa1273650:CDS
TTATCGGGACAATAGTTCTC+GGG 0.555359 8_3:-7400515 None:intergenic
CAAGAATTGGACACAAACAT+AGG 0.556602 8_3:+7399804 Msa1273650:CDS
TGCCATTTAGCTATGGAAGA+AGG 0.558898 8_3:+7400120 Msa1273650:CDS
AACCTTAGTGGTGAATAGTA+GGG 0.567602 8_3:+7397718 Msa1273650:CDS
CTCAACCCAAGAAGTCTCCA+TGG 0.569162 8_3:+7397427 Msa1273650:exon
TATGATTGAAGGTGTAGGAT+TGG 0.569237 8_3:+7400244 Msa1273650:CDS
TGATTGGAGGATGAGTTATC+GGG 0.569347 8_3:+7400617 Msa1273650:three_prime_UTR
ACACTGAGTAAATATTCTCT+CGG 0.571390 8_3:-7400542 None:intergenic
GTACAGCAATAACATTAGGA+TGG 0.572625 8_3:+7399733 Msa1273650:CDS
GGTTGCAGCATAACTTCAAG+TGG 0.575115 8_3:-7400284 None:intergenic
TACAGCAATAACATTAGGAT+GGG 0.578014 8_3:+7399734 Msa1273650:CDS
AGATGAAGGTGGCCTATGAA+AGG 0.578822 8_3:-7397605 None:intergenic
GTTGATATGATTGAAGGTGT+AGG 0.580866 8_3:+7400239 Msa1273650:CDS
TTTCATGAAGAGGACTGCTA+AGG 0.581298 8_3:+7398222 Msa1273650:CDS
TTAACGCGCATAACCCAAAA+GGG 0.581580 8_3:-7400454 None:intergenic
TGCCCACAAATCATGGGAGG+TGG 0.581969 8_3:-7400584 None:intergenic
GCAGGCTACCATGTGATCAA+AGG 0.584972 8_3:+7399960 Msa1273650:CDS
TGTTATTGCTGTACTTCCTG+AGG 0.585057 8_3:-7399724 None:intergenic
CTAATGAATTTCAACCTGAG+AGG 0.587907 8_3:+7400042 Msa1273650:CDS
AAATCAAACCAACTTAGGCT+AGG 0.591051 8_3:-7398184 None:intergenic
ACCAAGAAGATAGTGAGGCA+TGG 0.593249 8_3:+7398095 Msa1273650:CDS
CCATTATCAAAGAGACACTT+CGG 0.593830 8_3:+7399880 Msa1273650:CDS
TATGGAAGAAGGTCATGTGC+TGG 0.596783 8_3:+7400131 Msa1273650:CDS
AAGAGAGATGAGGTACAAAG+TGG 0.597988 8_3:+7398289 Msa1273650:CDS
CCTACCTGCCCACAAATCAT+GGG 0.599193 8_3:-7400590 None:intergenic
TTGGTTGCAACCAAGCCTAA+GGG 0.599480 8_3:-7397696 None:intergenic
TTCCTGTTAAGGGTGCTGGT+GGG 0.603062 8_3:-7399908 None:intergenic
TGCCACGTGGCAATCATCAG+TGG 0.604616 8_3:-7399940 None:intergenic
AACGAGTGCCTTTGATCACA+TGG 0.605097 8_3:-7399968 None:intergenic
GAATAGTAGGGAAATTGCCA+AGG 0.607094 8_3:+7397730 Msa1273650:CDS
GCAGGTAGGAAATTGATTGG+AGG 0.612532 8_3:+7400604 Msa1273650:three_prime_UTR
AGTTATCAAAGCAACAACCT+TGG 0.619780 8_3:+7398393 Msa1273650:CDS
GGTCCAGTTGATATGATTGA+AGG 0.623743 8_3:+7400233 Msa1273650:CDS
AATAAACCAAGAAGATAGTG+AGG 0.628813 8_3:+7398090 Msa1273650:CDS
AAAGATACTACATATCTATG+TGG 0.630395 8_3:+7398136 Msa1273650:CDS
CCTACTTATAAACCATCCAA+AGG 0.633459 8_3:+7399764 Msa1273650:CDS
ATGAAAGGTAAGGCACAACA+TGG 0.635212 8_3:-7397590 None:intergenic
AAGGTGGCCTATGAAAGGTA+AGG 0.638379 8_3:-7397600 None:intergenic
CCCATGATTTGTGGGCAGGT+AGG 0.639450 8_3:+7400590 Msa1273650:three_prime_UTR
TCGCCAATAATCTCCATAAG+GGG 0.640986 8_3:-7397846 None:intergenic
GATATAAACACAAAAGAAGG+TGG 0.646350 8_3:+7400212 Msa1273650:CDS
TAAAGCTCCAATGGGAGACG+TGG 0.653424 8_3:-7400305 None:intergenic
ACCTGCCCACAAATCATGGG+AGG 0.664022 8_3:-7400587 None:intergenic
TAGTGCTTAGAAGATGAAGG+TGG 0.670199 8_3:-7397616 None:intergenic
GATTTGTCAATGTCGTGTCG+GGG 0.674090 8_3:-7400792 None:intergenic
CAAGACCTAATGTAGCAGCA+GGG 0.703407 8_3:+7397786 Msa1273650:CDS
TCCTCTTCATGAAACCAACG+TGG 0.743480 8_3:-7398213 None:intergenic
TCACATGGTAGCCTGCCACG+TGG 0.746003 8_3:-7399953 None:intergenic
AGCCACTGATGATTGCCACG+TGG 0.771511 8_3:+7399938 Msa1273650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAATCTATTATTTGA+TGG + chr8_3:7398498-7398517 Msa1273650:intron 10.0%
!! AAAATAAGTATGATATTTAA+TGG - chr8_3:7398972-7398991 None:intergenic 10.0%
!! CATATATTTATTTAATTGAA+AGG - chr8_3:7399089-7399108 None:intergenic 10.0%
!!! TATCAAATATTCTAAATTTT+AGG + chr8_3:7399562-7399581 Msa1273650:intron 10.0%
!!! GTTTTTCATAATGTTAATAT+TGG + chr8_3:7397283-7397302 Msa1273650:five_prime_UTR 15.0%
!! ATTATTGAAAATGAATATGT+AGG - chr8_3:7397351-7397370 None:intergenic 15.0%
!! ACATTTGTAAAAAATTCAAA+TGG + chr8_3:7397974-7397993 Msa1273650:CDS 15.0%
!!! AAAAGTATGATATGAATATA+TGG - chr8_3:7398447-7398466 None:intergenic 15.0%
!!! AAAATTGATCTAATTCATTT+TGG - chr8_3:7398737-7398756 None:intergenic 15.0%
!! TAAATCAATATATTTGAATG+AGG - chr8_3:7398768-7398787 None:intergenic 15.0%
!!! ACAAATGAAAAATATTTTGA+TGG - chr8_3:7398878-7398897 None:intergenic 15.0%
!!! ATATTTTTCATTTGTTACTT+AGG + chr8_3:7398883-7398902 Msa1273650:intron 15.0%
!!! ATGTAATTAGACTTTAAAAT+AGG + chr8_3:7399177-7399196 Msa1273650:intron 15.0%
!!! AATTCTTTCTAAAATAATGA+TGG + chr8_3:7399244-7399263 Msa1273650:intron 15.0%
!! AGAGAGAAAAAATTATATAT+TGG - chr8_3:7399665-7399684 None:intergenic 15.0%
!!! TTTTTGTGTGATAAAATATA+TGG + chr8_3:7400384-7400403 Msa1273650:three_prime_UTR 15.0%
!!! AAATAGATGTGAAGTATTTA+TGG + chr8_3:7397392-7397411 Msa1273650:five_prime_UTR 20.0%
!! TAAAATAGGCATATATATCT+TGG + chr8_3:7399191-7399210 Msa1273650:intron 20.0%
!! AGAATTACCACAAAATATTT+GGG - chr8_3:7399230-7399249 None:intergenic 20.0%
!! AAGAATTACCACAAAATATT+TGG - chr8_3:7399231-7399250 None:intergenic 20.0%
!!! CTTGACTATTTTATCTATAT+AGG - chr8_3:7399450-7399469 None:intergenic 20.0%
!! TTTGATATAAACACAAAAGA+AGG + chr8_3:7400209-7400228 Msa1273650:CDS 20.0%
!!! ATGTAATGTACCTTTTATTT+TGG + chr8_3:7400685-7400704 Msa1273650:three_prime_UTR 20.0%
! AAAATAAAAAGGAAGATCCA+TGG - chr8_3:7397447-7397466 None:intergenic 25.0%
! ATTGTTTGTTTACGTCTATT+AGG - chr8_3:7397539-7397558 None:intergenic 25.0%
!!! GTTGAAAAGGTTCTAAAATA+TGG - chr8_3:7397647-7397666 None:intergenic 25.0%
! ATAATTGTGAAGATGATAGT+TGG + chr8_3:7398046-7398065 Msa1273650:CDS 25.0%
! AAAGATACTACATATCTATG+TGG + chr8_3:7398136-7398155 Msa1273650:CDS 25.0%
! ACATTATAAAAAGAGAGATG+AGG + chr8_3:7398279-7398298 Msa1273650:CDS 25.0%
! TGGAGATTAAAAGTTCATTT+AGG - chr8_3:7398909-7398928 None:intergenic 25.0%
!! AATTTGTTCAACATGATCAT+TGG - chr8_3:7398997-7399016 None:intergenic 25.0%
! GAATTACCACAAAATATTTG+GGG - chr8_3:7399229-7399248 None:intergenic 25.0%
! GCACAATTACAAATGATAAA+AGG + chr8_3:7399274-7399293 Msa1273650:intron 25.0%
!!! TTTTCTATTTTTCTCTCTCA+AGG - chr8_3:7399335-7399354 None:intergenic 25.0%
! TTATTGGAGTATATAGTAGT+AGG - chr8_3:7399628-7399647 None:intergenic 25.0%
! AAACATAGGAAAAGACAAAT+GGG + chr8_3:7399818-7399837 Msa1273650:CDS 25.0%
!! TAATGGCTTGAAGATATTTT+AGG - chr8_3:7399866-7399885 None:intergenic 25.0%
!!! CATTGATAATTTTCAGAATC+AGG + chr8_3:7400085-7400104 Msa1273650:CDS 25.0%
! ACACTTGATACAAATATCAA+AGG - chr8_3:7400337-7400356 None:intergenic 25.0%
! GCTCAAAATAATCATATCAT+TGG + chr8_3:7400431-7400450 Msa1273650:three_prime_UTR 25.0%
! AGGCAAATTTCCAAAATAAA+AGG - chr8_3:7400698-7400717 None:intergenic 25.0%
!!! TATAATTTCTAGCATTCATG+TGG - chr8_3:7400725-7400744 None:intergenic 25.0%
! ATACACTATGTAAGCATATT+TGG + chr8_3:7400747-7400766 Msa1273650:three_prime_UTR 25.0%
AATCATCAATAAGGCTAAGA+TGG - chr8_3:7397486-7397505 None:intergenic 30.0%
AAGTTGCACAATCATCAATA+AGG - chr8_3:7397495-7397514 None:intergenic 30.0%
!!! TTTTAGAACCTTTTCAACCA+TGG + chr8_3:7397649-7397668 Msa1273650:CDS 30.0%
!!! ATTTTTTGTGAGACATTCCT+TGG - chr8_3:7397750-7397769 None:intergenic 30.0%
! TTGAGCTTTTATCAAGTCAT+AGG + chr8_3:7397891-7397910 Msa1273650:CDS 30.0%
AATAAACCAAGAAGATAGTG+AGG + chr8_3:7398090-7398109 Msa1273650:CDS 30.0%
!! TCTATGTGGTGTTTTTGTTA+TGG + chr8_3:7398150-7398169 Msa1273650:CDS 30.0%
CTTGAAAATCAAACCAACTT+AGG - chr8_3:7398192-7398211 None:intergenic 30.0%
!!! CTAAGTTGGTTTGATTTTCA+AGG + chr8_3:7398190-7398209 Msa1273650:CDS 30.0%
TGGATTTCATTCTTGATAAG+TGG + chr8_3:7398248-7398267 Msa1273650:CDS 30.0%
TAAATGTGCAGATGATTTCA+TGG + chr8_3:7398312-7398331 Msa1273650:CDS 30.0%
GAAGAAGATGATGAAATTTG+TGG + chr8_3:7398355-7398374 Msa1273650:CDS 30.0%
! AATTCAACATAGGGTGTTTA+CGG - chr8_3:7398824-7398843 None:intergenic 30.0%
AAAATCGTGAAACAGACATA+TGG - chr8_3:7398929-7398948 None:intergenic 30.0%
AAATAGTCAAGACCATACTT+TGG + chr8_3:7399459-7399478 Msa1273650:intron 30.0%
TGACCAAGCAAATGTATATA+TGG - chr8_3:7399489-7399508 None:intergenic 30.0%
!!! TAGACTTGAGTTTTTAGAAC+AGG - chr8_3:7399532-7399551 None:intergenic 30.0%
!! GCTTTGAAAAAAGGCAAATT+AGG - chr8_3:7399589-7399608 None:intergenic 30.0%
CTACTATATACTCCAATAAG+TGG + chr8_3:7399629-7399648 Msa1273650:intron 30.0%
TACAGCAATAACATTAGGAT+GGG + chr8_3:7399734-7399753 Msa1273650:CDS 30.0%
CTTTGGATGGTTTATAAGTA+GGG - chr8_3:7399766-7399785 None:intergenic 30.0%
CAAACATAGGAAAAGACAAA+TGG + chr8_3:7399817-7399836 Msa1273650:CDS 30.0%
TTAACCTATGGAAATTGCAA+AGG + chr8_3:7399997-7400016 Msa1273650:CDS 30.0%
TAACCTATGGAAATTGCAAA+GGG + chr8_3:7399998-7400017 Msa1273650:CDS 30.0%
!! TCTCAGGTTGAAATTCATTA+GGG - chr8_3:7400043-7400062 None:intergenic 30.0%
TGAATATTGAAAAACCTCTC+AGG - chr8_3:7400059-7400078 None:intergenic 30.0%
! AATTTTCAGAATCAGGACTT+TGG + chr8_3:7400092-7400111 Msa1273650:CDS 30.0%
GATATAAACACAAAAGAAGG+TGG + chr8_3:7400212-7400231 Msa1273650:CDS 30.0%
ATATTCTCTCGGGATATTAT+CGG - chr8_3:7400534-7400553 None:intergenic 30.0%
ACACTGAGTAAATATTCTCT+CGG - chr8_3:7400545-7400564 None:intergenic 30.0%
CTTTAGTGCTTAGAAGATGA+AGG - chr8_3:7397622-7397641 None:intergenic 35.0%
TACTATTCACCACTAAGGTT+TGG - chr8_3:7397718-7397737 None:intergenic 35.0%
AAACCTTAGTGGTGAATAGT+AGG + chr8_3:7397717-7397736 Msa1273650:CDS 35.0%
AACCTTAGTGGTGAATAGTA+GGG + chr8_3:7397718-7397737 Msa1273650:CDS 35.0%
TTCGCCAATAATCTCCATAA+GGG - chr8_3:7397850-7397869 None:intergenic 35.0%
TTTCGCCAATAATCTCCATA+AGG - chr8_3:7397851-7397870 None:intergenic 35.0%
! TGATCTAGAAACTTGCTCAT+AGG - chr8_3:7398013-7398032 None:intergenic 35.0%
ATAGTTGGCAAGAGATTTAG+TGG + chr8_3:7398061-7398080 Msa1273650:CDS 35.0%
AAATCAAACCAACTTAGGCT+AGG - chr8_3:7398187-7398206 None:intergenic 35.0%
ATGAAATTTGTGGCCACAAA+CGG + chr8_3:7398365-7398384 Msa1273650:CDS 35.0%
AGTTATCAAAGCAACAACCT+TGG + chr8_3:7398393-7398412 Msa1273650:CDS 35.0%
GCAGCTCAAAATTCAACATA+GGG - chr8_3:7398833-7398852 None:intergenic 35.0%
TGCAGCTCAAAATTCAACAT+AGG - chr8_3:7398834-7398853 None:intergenic 35.0%
! ATGTTGAATTTTGAGCTGCA+AGG + chr8_3:7398834-7398853 Msa1273650:intron 35.0%
! TCATAGCCCCAAATATTTTG+TGG + chr8_3:7399220-7399239 Msa1273650:intron 35.0%
! GAGGTGTTAAATGAGTATCA+AGG + chr8_3:7399388-7399407 Msa1273650:intron 35.0%
ATATATGGACGTCCAAAGTA+TGG - chr8_3:7399474-7399493 None:intergenic 35.0%
CGTCCATATATACATTTGCT+TGG + chr8_3:7399483-7399502 Msa1273650:intron 35.0%
!! CACATGCAAGCTTTGAAAAA+AGG - chr8_3:7399598-7399617 None:intergenic 35.0%
! GGAAGTACAGCAATAACATT+AGG + chr8_3:7399729-7399748 Msa1273650:CDS 35.0%
GTACAGCAATAACATTAGGA+TGG + chr8_3:7399733-7399752 Msa1273650:CDS 35.0%
CCTTTGGATGGTTTATAAGT+AGG - chr8_3:7399767-7399786 None:intergenic 35.0%
CCTACTTATAAACCATCCAA+AGG + chr8_3:7399764-7399783 Msa1273650:CDS 35.0%
!!! CTTGTTTTAAGACCTTTGGA+TGG - chr8_3:7399779-7399798 None:intergenic 35.0%
!!! TGTGCTTGTTTTAAGACCTT+TGG - chr8_3:7399783-7399802 None:intergenic 35.0%
AAAACAAGCACAGCAAGAAT+TGG + chr8_3:7399791-7399810 Msa1273650:CDS 35.0%
CAAGAATTGGACACAAACAT+AGG + chr8_3:7399804-7399823 Msa1273650:CDS 35.0%
! GGTTTTTGATGTCACATTCT+TGG - chr8_3:7399845-7399864 None:intergenic 35.0%
CCATTATCAAAGAGACACTT+CGG + chr8_3:7399880-7399899 Msa1273650:CDS 35.0%
GCTTCTCTTATTCCTGTTAA+GGG - chr8_3:7399921-7399940 None:intergenic 35.0%
CTCGTTTGCTTATTAACCTA+TGG + chr8_3:7399985-7400004 Msa1273650:CDS 35.0%
!! CTCTCAGGTTGAAATTCATT+AGG - chr8_3:7400044-7400063 None:intergenic 35.0%
CTAATGAATTTCAACCTGAG+AGG + chr8_3:7400042-7400061 Msa1273650:CDS 35.0%
ACACCTTCAATCATATCAAC+TGG - chr8_3:7400239-7400258 None:intergenic 35.0%
! GTTGATATGATTGAAGGTGT+AGG + chr8_3:7400239-7400258 Msa1273650:CDS 35.0%
! TATGATTGAAGGTGTAGGAT+TGG + chr8_3:7400244-7400263 Msa1273650:CDS 35.0%
!! ACTTCAAGTGGATTTTCCTT+AGG - chr8_3:7400275-7400294 None:intergenic 35.0%
! AATCATATCATTGGCCCTTT+TGG + chr8_3:7400440-7400459 Msa1273650:three_prime_UTR 35.0%
! ATCATATCATTGGCCCTTTT+GGG + chr8_3:7400441-7400460 Msa1273650:three_prime_UTR 35.0%
ATTATCGGGACAATAGTTCT+CGG - chr8_3:7400519-7400538 None:intergenic 35.0%
TATTCTCTCGGGATATTATC+GGG - chr8_3:7400533-7400552 None:intergenic 35.0%
CACTGAGTAAATATTCTCTC+GGG - chr8_3:7400544-7400563 None:intergenic 35.0%
TTGATTGGAGGATGAGTTAT+CGG + chr8_3:7400616-7400635 Msa1273650:three_prime_UTR 35.0%
ATGAGTTATCGGGACAAATT+CGG + chr8_3:7400627-7400646 Msa1273650:three_prime_UTR 35.0%
TAGATTTGTCAATGTCGTGT+CGG - chr8_3:7400797-7400816 None:intergenic 35.0%
CATGCATGAAGTTCACGATA+TGG - chr8_3:7397319-7397338 None:intergenic 40.0%
AAGATCCATGGAGACTTCTT+GGG - chr8_3:7397435-7397454 None:intergenic 40.0%
!! ATGGTTCGGGTATTTTGTTG+TGG - chr8_3:7397574-7397593 None:intergenic 40.0%
ATGAAAGGTAAGGCACAACA+TGG - chr8_3:7397593-7397612 None:intergenic 40.0%
TGTTGTGCCTTACCTTTCAT+AGG + chr8_3:7397593-7397612 Msa1273650:CDS 40.0%
TAGTGCTTAGAAGATGAAGG+TGG - chr8_3:7397619-7397638 None:intergenic 40.0%
TTTCTCAGCCATGGTTGAAA+AGG - chr8_3:7397660-7397679 None:intergenic 40.0%
TCAACCATGGCTGAGAAATA+TGG + chr8_3:7397662-7397681 Msa1273650:CDS 40.0%
TTCCCTACTATTCACCACTA+AGG - chr8_3:7397723-7397742 None:intergenic 40.0%
GAATAGTAGGGAAATTGCCA+AGG + chr8_3:7397730-7397749 Msa1273650:CDS 40.0%
!!! ATTTTAGCTCTTGCCCCTTA+TGG + chr8_3:7397833-7397852 Msa1273650:CDS 40.0%
TTGCCCCTTATGGAGATTAT+TGG + chr8_3:7397843-7397862 Msa1273650:CDS 40.0%
TCGCCAATAATCTCCATAAG+GGG - chr8_3:7397849-7397868 None:intergenic 40.0%
ATAGTGAGGCATGGAGATTA+AGG + chr8_3:7398104-7398123 Msa1273650:CDS 40.0%
ATGCTATTCCTAGCCTAAGT+TGG + chr8_3:7398176-7398195 Msa1273650:CDS 40.0%
!! TTTGATTTTCAAGGCCACGT+TGG + chr8_3:7398199-7398218 Msa1273650:CDS 40.0%
TTTCATGAAGAGGACTGCTA+AGG + chr8_3:7398222-7398241 Msa1273650:CDS 40.0%
AAGAGAGATGAGGTACAAAG+TGG + chr8_3:7398289-7398308 Msa1273650:CDS 40.0%
TGAAATTTGTGGCCACAAAC+GGG + chr8_3:7398366-7398385 Msa1273650:CDS 40.0%
TTTCCTTCATGCTTAGCAAC+AGG + chr8_3:7398421-7398440 Msa1273650:intron 40.0%
CTCTCTCAAGGTGTATATGA+GGG - chr8_3:7399323-7399342 None:intergenic 40.0%
TCTCTCTCAAGGTGTATATG+AGG - chr8_3:7399324-7399343 None:intergenic 40.0%
AGCGAGACACAAAGAAAATG+AGG + chr8_3:7399369-7399388 Msa1273650:intron 40.0%
GGTCTTCATGTACCACTTAT+TGG - chr8_3:7399644-7399663 None:intergenic 40.0%
ATTCTTATCCTTACAGCCTC+AGG + chr8_3:7399708-7399727 Msa1273650:CDS 40.0%
TGTTATTGCTGTACTTCCTG+AGG - chr8_3:7399727-7399746 None:intergenic 40.0%
! CCGAAGTGTCTCTTTGATAA+TGG - chr8_3:7399883-7399902 None:intergenic 40.0%
GGCTTCTCTTATTCCTGTTA+AGG - chr8_3:7399922-7399941 None:intergenic 40.0%
TAGGGTTTGACCATACTTGT+GGG - chr8_3:7400025-7400044 None:intergenic 40.0%
TTAGGGTTTGACCATACTTG+TGG - chr8_3:7400026-7400045 None:intergenic 40.0%
!! GGATATGTGCCATTTAGCTA+TGG + chr8_3:7400113-7400132 Msa1273650:CDS 40.0%
! TGCCATTTAGCTATGGAAGA+AGG + chr8_3:7400120-7400139 Msa1273650:CDS 40.0%
GACCTTCTTCCATAGCTAAA+TGG - chr8_3:7400125-7400144 None:intergenic 40.0%
! TCATGTGCTGGTACAACATT+TGG + chr8_3:7400143-7400162 Msa1273650:CDS 40.0%
! CATGTGCTGGTACAACATTT+GGG + chr8_3:7400144-7400163 Msa1273650:CDS 40.0%
! GCAAGTGTTGCATTTGACTT+TGG + chr8_3:7400169-7400188 Msa1273650:CDS 40.0%
! TGTTGCATTTGACTTTGGCT+AGG + chr8_3:7400174-7400193 Msa1273650:CDS 40.0%
!! ACTTTGGCTAGGTTGATTCA+AGG + chr8_3:7400185-7400204 Msa1273650:CDS 40.0%
!! CTTTGGCTAGGTTGATTCAA+GGG + chr8_3:7400186-7400205 Msa1273650:CDS 40.0%
! GGTCCAGTTGATATGATTGA+AGG + chr8_3:7400233-7400252 Msa1273650:CDS 40.0%
GGCTTTCATAAAGCTCCAAT+GGG - chr8_3:7400316-7400335 None:intergenic 40.0%
AGGCTTTCATAAAGCTCCAA+TGG - chr8_3:7400317-7400336 None:intergenic 40.0%
TTAACGCGCATAACCCAAAA+GGG - chr8_3:7400457-7400476 None:intergenic 40.0%
ATTAACGCGCATAACCCAAA+AGG - chr8_3:7400458-7400477 None:intergenic 40.0%
TTATCGGGACAATAGTTCTC+GGG - chr8_3:7400518-7400537 None:intergenic 40.0%
TGATTGGAGGATGAGTTATC+GGG + chr8_3:7400617-7400636 Msa1273650:three_prime_UTR 40.0%
TGAGTTATCGGGACAAATTC+GGG + chr8_3:7400628-7400647 Msa1273650:three_prime_UTR 40.0%
TCTAGCATTCATGTGGATCA+AGG - chr8_3:7400718-7400737 None:intergenic 40.0%
AGATTTGTCAATGTCGTGTC+GGG - chr8_3:7400796-7400815 None:intergenic 40.0%
GAAGATCCATGGAGACTTCT+TGG - chr8_3:7397436-7397455 None:intergenic 45.0%
AGGTAAGGCACAACATGGTT+CGG - chr8_3:7397588-7397607 None:intergenic 45.0%
AAGGTGGCCTATGAAAGGTA+AGG - chr8_3:7397603-7397622 None:intergenic 45.0%
AGATGAAGGTGGCCTATGAA+AGG - chr8_3:7397608-7397627 None:intergenic 45.0%
TGGACCATATTTCTCAGCCA+TGG - chr8_3:7397669-7397688 None:intergenic 45.0%
ATGGTCCAATCTTCTCCCTT+AGG + chr8_3:7397681-7397700 Msa1273650:CDS 45.0%
TTGGTTGCAACCAAGCCTAA+GGG - chr8_3:7397699-7397718 None:intergenic 45.0%
TTTGGTTGCAACCAAGCCTA+AGG - chr8_3:7397700-7397719 None:intergenic 45.0%
TGGTTGCAACCAAACCTTAG+TGG + chr8_3:7397706-7397725 Msa1273650:CDS 45.0%
TGCTGCTACATTAGGTCTTG+AGG - chr8_3:7397786-7397805 None:intergenic 45.0%
TCAAGACCTAATGTAGCAGC+AGG + chr8_3:7397785-7397804 Msa1273650:CDS 45.0%
CAAGACCTAATGTAGCAGCA+GGG + chr8_3:7397786-7397805 Msa1273650:CDS 45.0%
TATCTCCCTGCTGCTACATT+AGG - chr8_3:7397794-7397813 None:intergenic 45.0%
ACCAAGAAGATAGTGAGGCA+TGG + chr8_3:7398095-7398114 Msa1273650:CDS 45.0%
TCCATGCCTCACTATCTTCT+TGG - chr8_3:7398099-7398118 None:intergenic 45.0%
TCCTCTTCATGAAACCAACG+TGG - chr8_3:7398216-7398235 None:intergenic 45.0%
GAAGAGGACTGCTAAGGAAA+TGG + chr8_3:7398228-7398247 Msa1273650:CDS 45.0%
TGATAACTGTCTCCCGTTTG+TGG - chr8_3:7398381-7398400 None:intergenic 45.0%
GCATGAAGGAAAACGTACCA+AGG - chr8_3:7398413-7398432 None:intergenic 45.0%
! CAACATAGGGTGTTTACGGT+CGG - chr8_3:7398820-7398839 None:intergenic 45.0%
! CAAGGTGTATATGAGGGCAT+GGG - chr8_3:7399317-7399336 None:intergenic 45.0%
TCAAGGTGTATATGAGGGCA+TGG - chr8_3:7399318-7399337 None:intergenic 45.0%
! CTTATTCCTGTTAAGGGTGC+TGG - chr8_3:7399915-7399934 None:intergenic 45.0%
AACGAGTGCCTTTGATCACA+TGG - chr8_3:7399971-7399990 None:intergenic 45.0%
GGTCCCTTTGCAATTTCCAT+AGG - chr8_3:7400004-7400023 None:intergenic 45.0%
TATGGAAGAAGGTCATGTGC+TGG + chr8_3:7400131-7400150 Msa1273650:CDS 45.0%
! TGTAGGATTGGCATTGCCTA+AGG + chr8_3:7400256-7400275 Msa1273650:CDS 45.0%
GGTTGCAGCATAACTTCAAG+TGG - chr8_3:7400287-7400306 None:intergenic 45.0%
TGGGCAGGTAGGAAATTGAT+TGG + chr8_3:7400601-7400620 Msa1273650:three_prime_UTR 45.0%
GCAGGTAGGAAATTGATTGG+AGG + chr8_3:7400604-7400623 Msa1273650:three_prime_UTR 45.0%
GATTTGTCAATGTCGTGTCG+GGG - chr8_3:7400795-7400814 None:intergenic 45.0%
!! ATAATAATTTGAAAATAAAA+AGG - chr8_3:7397458-7397477 None:intergenic 5.0%
!! TGGAGACTTCTTGGGTTGAG+AGG - chr8_3:7397427-7397446 None:intergenic 50.0%
CTCAACCCAAGAAGTCTCCA+TGG + chr8_3:7397427-7397446 Msa1273650:exon 50.0%
GGTAAGGCACAACATGGTTC+GGG - chr8_3:7397587-7397606 None:intergenic 50.0%
CCAAGCCTAAGGGAGAAGAT+TGG - chr8_3:7397689-7397708 None:intergenic 50.0%
CCAATCTTCTCCCTTAGGCT+TGG + chr8_3:7397686-7397705 Msa1273650:CDS 50.0%
GTAGCAGCAGGGAGATACTT+AGG + chr8_3:7397797-7397816 Msa1273650:CDS 50.0%
!! GCCACGTTGGTTTCATGAAG+AGG + chr8_3:7398212-7398231 Msa1273650:CDS 50.0%
TGGCCTGTTGCTAAGCATGA+AGG - chr8_3:7398427-7398446 None:intergenic 50.0%
CTGTACTTCCTGAGGCTGTA+AGG - chr8_3:7399719-7399738 None:intergenic 50.0%
!! TTCCTGTTAAGGGTGCTGGT+GGG - chr8_3:7399911-7399930 None:intergenic 50.0%
!! ATTCCTGTTAAGGGTGCTGG+TGG - chr8_3:7399912-7399931 None:intergenic 50.0%
GCAGGCTACCATGTGATCAA+AGG + chr8_3:7399960-7399979 Msa1273650:CDS 50.0%
TGCAAAGGGACCCACAAGTA+TGG + chr8_3:7400012-7400031 Msa1273650:CDS 50.0%
TAAAGCTCCAATGGGAGACG+TGG - chr8_3:7400308-7400327 None:intergenic 50.0%
!!! GAGGTGGTGGGGCTTAATTT+TGG - chr8_3:7400571-7400590 None:intergenic 50.0%
ACAAATCATGGGAGGTGGTG+GGG - chr8_3:7400582-7400601 None:intergenic 50.0%
CACAAATCATGGGAGGTGGT+GGG - chr8_3:7400583-7400602 None:intergenic 50.0%
! CACCACCTCCCATGATTTGT+GGG + chr8_3:7400582-7400601 Msa1273650:three_prime_UTR 50.0%
CCTACCTGCCCACAAATCAT+GGG - chr8_3:7400593-7400612 None:intergenic 50.0%
TCCTACCTGCCCACAAATCA+TGG - chr8_3:7400594-7400613 None:intergenic 50.0%
TACCCACCAGCACCCTTAAC+AGG + chr8_3:7399906-7399925 Msa1273650:CDS 55.0%
AGCCACTGATGATTGCCACG+TGG + chr8_3:7399938-7399957 Msa1273650:CDS 55.0%
TGCCACGTGGCAATCATCAG+TGG - chr8_3:7399943-7399962 None:intergenic 55.0%
ACTGATGATTGCCACGTGGC+AGG + chr8_3:7399942-7399961 Msa1273650:CDS 55.0%
CCACAAATCATGGGAGGTGG+TGG - chr8_3:7400584-7400603 None:intergenic 55.0%
CCACCACCTCCCATGATTTG+TGG + chr8_3:7400581-7400600 Msa1273650:three_prime_UTR 55.0%
TGCCCACAAATCATGGGAGG+TGG - chr8_3:7400587-7400606 None:intergenic 55.0%
! ACCTCCCATGATTTGTGGGC+AGG + chr8_3:7400586-7400605 Msa1273650:three_prime_UTR 55.0%
ACCTGCCCACAAATCATGGG+AGG - chr8_3:7400590-7400609 None:intergenic 55.0%
! CCCATGATTTGTGGGCAGGT+AGG + chr8_3:7400590-7400609 Msa1273650:three_prime_UTR 55.0%
TCACATGGTAGCCTGCCACG+TGG - chr8_3:7399956-7399975 None:intergenic 60.0%
GCTGCAACCACGTCTCCCAT+TGG + chr8_3:7400298-7400317 Msa1273650:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 7397246 7400832 7397246 ID=Msa1273650;Name=Msa1273650
chr8_3 mRNA 7397246 7400832 7397246 ID=Msa1273650-mRNA-1;Parent=Msa1273650;Name=Msa1273650-mRNA-1;_AED=0.24;_eAED=0.24;_QI=200|1|1|1|1|1|2|492|533
chr8_3 exon 7397246 7398414 7397246 ID=Msa1273650-mRNA-1:exon:2911;Parent=Msa1273650-mRNA-1
chr8_3 exon 7399708 7400832 7399708 ID=Msa1273650-mRNA-1:exon:2912;Parent=Msa1273650-mRNA-1
chr8_3 five_prime_UTR 7397246 7397445 7397246 ID=Msa1273650-mRNA-1:five_prime_utr;Parent=Msa1273650-mRNA-1
chr8_3 CDS 7397446 7398414 7397446 ID=Msa1273650-mRNA-1:cds;Parent=Msa1273650-mRNA-1
chr8_3 CDS 7399708 7400340 7399708 ID=Msa1273650-mRNA-1:cds;Parent=Msa1273650-mRNA-1
chr8_3 three_prime_UTR 7400341 7400832 7400341 ID=Msa1273650-mRNA-1:three_prime_utr;Parent=Msa1273650-mRNA-1
Gene Sequence

>Msa1273650

ATGGATCTTCCTTTTTATTTTCAAATTATTATTGCATCCATCTTAGCCTTATTGATGATTGTGCAACTTCAATTTAGATCTATTAGATCACCTAATAGACGTAAACAAACAATATTCAGCATAAACCACAACAAAATACCCGAACCATGTTGTGCCTTACCTTTCATAGGCCACCTTCATCTTCTAAGCACTAAAGAGCCATATTTTAGAACCTTTTCAACCATGGCTGAGAAATATGGTCCAATCTTCTCCCTTAGGCTTGGTTGCAACCAAACCTTAGTGGTGAATAGTAGGGAAATTGCCAAGGAATGTCTCACAAAAAATGACAAAGTTTTTTCCTCAAGACCTAATGTAGCAGCAGGGAGATACTTAGGTTACAACAATGCTATTTTAGCTCTTGCCCCTTATGGAGATTATTGGCGAAACATGAGAAAAATTTCAACTCTTGAGCTTTTATCAAGTCATAGGCTTGAAAAGCTAAAGCATGTTAGAGATTTTGAGATATACTCTCTAGTCAAAAATTTGTACACATTTGTAAAAAATTCAAATGGTTCAATTGAAGTACCTATGAGCAAGTTTCTAGATCATATGACATTTAATATAATTGTGAAGATGATAGTTGGCAAGAGATTTAGTGGTGAAACAATAAACCAAGAAGATAGTGAGGCATGGAGATTAAGGAATGCAATTAAAGATACTACATATCTATGTGGTGTTTTTGTTATGGCTGATGCTATTCCTAGCCTAAGTTGGTTTGATTTTCAAGGCCACGTTGGTTTCATGAAGAGGACTGCTAAGGAAATGGATTTCATTCTTGATAAGTGGTTGTGTGAACATTATAAAAAGAGAGATGAGGTACAAAGTGGTAAATGTGCAGATGATTTCATGGATGTATTGATATCAATGTTTGAAGAAGATGATGAAATTTGTGGCCACAAACGGGAGACAGTTATCAAAGCAACAACCTTGATTCTTATCCTTACAGCCTCAGGAAGTACAGCAATAACATTAGGATGGGCTCTTTCCCTACTTATAAACCATCCAAAGGTCTTAAAACAAGCACAGCAAGAATTGGACACAAACATAGGAAAAGACAAATGGGTCCAAGAATGTGACATCAAAAACCTAAAATATCTTCAAGCCATTATCAAAGAGACACTTCGGTTATACCCACCAGCACCCTTAACAGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAGGCTACCATGTGATCAAAGGCACTCGTTTGCTTATTAACCTATGGAAATTGCAAAGGGACCCACAAGTATGGTCAAACCCTAATGAATTTCAACCTGAGAGGTTTTTCAATATTCATGATCACATTGATAATTTTCAGAATCAGGACTTTGGATATGTGCCATTTAGCTATGGAAGAAGGTCATGTGCTGGTACAACATTTGGGTTGCAAGTGTTGCATTTGACTTTGGCTAGGTTGATTCAAGGGTTTGATATAAACACAAAAGAAGGTGGTCCAGTTGATATGATTGAAGGTGTAGGATTGGCATTGCCTAAGGAAAATCCACTTGAAGTTATGCTGCAACCACGTCTCCCATTGGAGCTTTATGAAAGCCTTTGA
Protein sequence

>Msa1273650

MDLPFYFQIIIASILALLMIVQLQFRSIRSPNRRKQTIFSINHNKIPEPCCALPFIGHLHLLSTKEPYFRTFSTMAEKYGPIFSLRLGCNQTLVVNSREIAKECLTKNDKVFSSRPNVAAGRYLGYNNAILALAPYGDYWRNMRKISTLELLSSHRLEKLKHVRDFEIYSLVKNLYTFVKNSNGSIEVPMSKFLDHMTFNIIVKMIVGKRFSGETINQEDSEAWRLRNAIKDTTYLCGVFVMADAIPSLSWFDFQGHVGFMKRTAKEMDFILDKWLCEHYKKRDEVQSGKCADDFMDVLISMFEEDDEICGHKRETVIKATTLILILTASGSTAITLGWALSLLINHPKVLKQAQQELDTNIGKDKWVQECDIKNLKYLQAIIKETLRLYPPAPLTGIREATDDCHVAGYHVIKGTRLLINLWKLQRDPQVWSNPNEFQPERFFNIHDHIDNFQNQDFGYVPFSYGRRSCAGTTFGLQVLHLTLARLIQGFDINTKEGGPVDMIEGVGLALPKENPLEVMLQPRLPLELYESL*