AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1311630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311630 MtrunA17_Chr8g0339311 92.871 533 35 3 1 533 1 530 0.0 1022
Msa1311630 MtrunA17_Chr6g0458561 45.507 523 268 8 11 531 26 533 3.30e-158 461
Msa1311630 MtrunA17_Chr6g0466941 45.000 500 267 5 40 533 28 525 4.77e-155 453
Msa1311630 MtrunA17_Chr8g0339331 46.721 488 252 6 45 530 38 519 9.23e-153 447
Msa1311630 MtrunA17_Chr6g0451741 45.082 488 258 4 52 531 66 551 1.17e-152 448
Msa1311630 MtrunA17_Chr6g0466901 45.051 495 262 6 44 530 29 521 1.03e-150 442
Msa1311630 MtrunA17_Chr6g0451751 45.527 503 262 7 39 533 33 531 5.69e-150 440
Msa1311630 MtrunA17_Chr6g0451641 41.078 538 298 8 1 533 1 524 4.51e-148 435
Msa1311630 MtrunA17_Chr2g0304871 43.702 524 282 7 8 529 6 518 5.08e-148 435
Msa1311630 MtrunA17_Chr6g0451691 44.172 489 262 5 52 531 47 533 5.53e-148 435
Msa1311630 MtrunA17_Chr4g0046631 47.239 489 241 7 47 530 47 523 5.47e-147 432
Msa1311630 MtrunA17_Chr6g0451781 43.888 499 272 6 39 531 66 562 1.34e-141 420
Msa1311630 MtrunA17_Chr4g0008101 41.551 503 284 5 39 533 31 531 4.74e-139 412
Msa1311630 MtrunA17_Chr3g0082701 42.245 490 273 5 52 533 45 532 5.93e-137 407
Msa1311630 MtrunA17_Chr4g0053621 38.050 523 289 8 5 524 4 494 4.91e-114 347
Msa1311630 MtrunA17_Chr5g0401681 37.002 527 295 10 5 529 4 495 2.91e-112 342
Msa1311630 MtrunA17_Chr4g0039391 38.737 475 267 8 55 524 44 499 3.93e-108 332
Msa1311630 MtrunA17_Chr6g0451681 36.792 530 253 9 6 531 31 482 8.14e-108 330
Msa1311630 MtrunA17_Chr5g0401691 37.931 493 278 9 35 524 40 507 7.47e-106 326
Msa1311630 MtrunA17_Chr8g0344181 37.910 488 287 10 46 530 38 512 3.47e-103 319
Msa1311630 MtrunA17_Chr8g0344151 37.372 487 286 11 47 530 40 510 2.50e-101 315
Msa1311630 MtrunA17_Chr4g0052861 35.225 511 296 9 15 524 14 490 3.79e-99 308
Msa1311630 MtrunA17_Chr1g0174461 34.345 527 319 10 2 525 3 505 4.61e-99 309
Msa1311630 MtrunA17_Chr4g0061381 36.695 466 279 6 71 530 54 509 2.69e-98 306
Msa1311630 MtrunA17_Chr3g0086691 34.681 470 291 5 70 532 54 514 5.16e-98 306
Msa1311630 MtrunA17_Chr8g0390881 37.282 515 292 13 13 517 4 497 9.82e-97 303
Msa1311630 MtrunA17_Chr3g0086651 35.684 468 289 6 70 532 54 514 4.98e-96 301
Msa1311630 MtrunA17_Chr8g0344191 35.405 531 314 11 3 530 40 544 6.96e-96 301
Msa1311630 MtrunA17_Chr6g0484841 37.526 485 274 11 42 517 33 497 1.47e-95 300
Msa1311630 MtrunA17_Chr3g0084921 34.196 541 313 13 1 527 2 513 1.70e-95 300
Msa1311630 MtrunA17_Chr4g0052881 35.938 512 292 11 15 524 14 491 6.44e-95 298
Msa1311630 MtrunA17_Chr4g0052851 35.892 482 277 7 44 524 32 482 1.06e-94 297
Msa1311630 MtrunA17_Chr3g0086661 35.256 468 291 6 70 532 54 514 3.82e-94 296
Msa1311630 MtrunA17_Chr1g0174451 34.497 487 304 7 42 525 32 506 8.65e-93 292
Msa1311630 MtrunA17_Chr3g0094171 33.977 518 318 10 15 530 18 513 1.30e-92 292
Msa1311630 MtrunA17_Chr1g0174481 34.038 520 318 9 6 525 6 500 5.08e-92 290
Msa1311630 MtrunA17_Chr2g0296651 36.819 459 263 6 71 524 54 490 5.87e-92 290
Msa1311630 MtrunA17_Chr1g0174441 34.132 501 305 9 36 525 41 527 5.95e-92 291
Msa1311630 MtrunA17_Chr6g0484811 36.049 491 290 8 42 525 33 506 2.42e-91 288
Msa1311630 MtrunA17_Chr4g0058231 33.977 518 304 12 9 517 3 491 2.59e-91 288
Msa1311630 MtrunA17_Chr4g0017411 35.537 484 276 9 44 524 29 479 6.18e-91 287
Msa1311630 MtrunA17_Chr5g0430101 35.020 494 291 10 40 525 31 502 8.71e-91 287
Msa1311630 MtrunA17_Chr1g0174471 36.515 482 289 12 49 525 52 521 3.13e-90 286
Msa1311630 MtrunA17_Chr4g0030701 35.529 501 295 9 43 527 32 520 4.45e-90 286
Msa1311630 MtrunA17_Chr5g0430131 35.020 494 292 10 40 525 32 504 1.82e-88 281
Msa1311630 MtrunA17_Chr2g0296661 36.653 472 279 8 58 527 44 497 3.72e-88 280
Msa1311630 MtrunA17_Chr7g0235551 34.937 478 282 9 40 505 28 488 1.03e-87 279
Msa1311630 MtrunA17_Chr7g0258221 34.774 486 301 8 44 525 32 505 1.30e-87 279
Msa1311630 MtrunA17_Chr8g0361471 34.205 497 295 11 7 498 3 472 2.68e-87 278
Msa1311630 MtrunA17_Chr5g0430081 34.442 511 299 13 33 533 25 509 6.25e-87 277
Msa1311630 MtrunA17_Chr8g0362701 34.894 470 295 7 57 525 46 505 1.53e-86 276
Msa1311630 MtrunA17_Chr7g0254641 32.727 495 318 8 44 531 35 521 6.32e-86 275
Msa1311630 MtrunA17_Chr5g0430031 33.061 490 294 11 11 492 6 469 6.49e-86 275
Msa1311630 MtrunA17_Chr5g0430091 33.603 494 300 10 40 525 32 505 1.95e-85 273
Msa1311630 MtrunA17_Chr2g0310381 32.919 483 300 11 42 517 21 486 1.86e-84 270
Msa1311630 MtrunA17_Chr7g0258211 31.702 470 297 10 56 517 49 502 3.99e-84 270
Msa1311630 MtrunA17_Chr6g0466331 33.803 497 297 11 7 498 3 472 4.69e-84 270
Msa1311630 MtrunA17_Chr3g0101601 33.540 483 288 11 46 520 36 493 6.72e-84 269
Msa1311630 MtrunA17_Chr4g0058201 32.724 492 302 12 40 523 22 492 9.34e-84 268
Msa1311630 MtrunA17_Chr3g0116681 33.083 532 302 18 4 523 13 502 1.04e-83 269
Msa1311630 MtrunA17_Chr3g0101611 33.126 483 296 11 42 517 34 496 1.08e-83 269
Msa1311630 MtrunA17_Chr1g0207841 33.947 489 286 11 57 525 49 520 1.28e-83 269
Msa1311630 MtrunA17_Chr1g0156101 33.551 459 286 11 47 498 36 482 1.83e-83 268
Msa1311630 MtrunA17_Chr6g0465511 33.602 497 298 11 7 498 3 472 2.41e-83 268
Msa1311630 MtrunA17_Chr2g0310391 32.298 483 303 11 42 517 21 486 3.09e-83 267
Msa1311630 MtrunA17_Chr3g0101691 33.333 528 311 15 1 517 1 498 7.70e-83 266
Msa1311630 MtrunA17_Chr4g0011961 33.809 491 294 10 38 517 18 488 7.78e-83 266
Msa1311630 MtrunA17_Chr3g0116741 33.266 493 300 13 39 523 42 513 8.46e-83 267
Msa1311630 MtrunA17_Chr8g0362481 34.389 442 281 5 85 525 3 436 1.16e-82 264
Msa1311630 MtrunA17_Chr5g0431641 31.380 529 325 11 4 526 6 502 1.19e-82 266
Msa1311630 MtrunA17_Chr4g0058191 33.612 479 287 13 53 523 32 487 2.94e-82 264
Msa1311630 MtrunA17_Chr4g0058281 33.126 483 302 10 42 519 43 509 3.02e-82 265
Msa1311630 MtrunA17_Chr3g0094231 32.839 472 302 9 54 525 44 500 5.04e-82 264
Msa1311630 MtrunA17_Chr3g0101721 33.542 480 291 12 46 517 37 496 6.13e-82 264
Msa1311630 MtrunA17_Chr5g0445461 32.558 516 314 9 4 515 6 491 6.44e-82 264
Msa1311630 MtrunA17_Chr3g0101711 33.207 527 312 16 1 517 1 497 9.83e-82 263
Msa1311630 MtrunA17_Chr3g0101581 31.870 524 318 13 6 520 5 498 1.23e-81 263
Msa1311630 MtrunA17_Chr4g0057001 32.784 485 307 9 43 525 47 514 1.65e-81 263
Msa1311630 MtrunA17_Chr4g0011921 32.759 522 302 13 7 517 6 489 2.04e-81 262
Msa1311630 MtrunA17_Chr1g0162811 30.280 535 331 14 1 527 1 501 3.21e-81 262
Msa1311630 MtrunA17_Chr5g0419691 32.258 496 306 11 40 527 24 497 3.85e-81 261
Msa1311630 MtrunA17_Chr7g0255531 31.944 504 319 10 37 533 19 505 5.11e-81 262
Msa1311630 MtrunA17_Chr3g0101661 32.700 526 316 14 1 517 1 497 7.56e-81 261
Msa1311630 MtrunA17_Chr3g0101621 33.195 482 288 11 46 520 33 487 1.13e-80 260
Msa1311630 MtrunA17_Chr4g0011871 32.460 496 306 11 40 527 24 498 1.77e-80 260
Msa1311630 MtrunA17_Chr8g0382901 34.172 477 277 9 44 517 26 468 1.77e-80 270
Msa1311630 MtrunA17_Chr8g0382901 33.608 485 300 10 44 525 490 955 1.28e-77 263
Msa1311630 MtrunA17_Chr5g0431671 32.305 486 304 9 46 526 38 503 4.14e-80 259
Msa1311630 MtrunA17_Chr3g0101631 31.939 526 314 13 9 523 6 498 4.21e-80 259
Msa1311630 MtrunA17_Chr3g0101671 31.827 509 313 12 17 517 16 498 8.83e-80 258
Msa1311630 MtrunA17_Chr8g0351801 32.500 480 294 9 56 517 44 511 1.52e-79 258
Msa1311630 MtrunA17_Chr4g0056951 32.189 466 304 5 60 525 56 509 1.76e-79 258
Msa1311630 MtrunA17_Chr4g0011901 33.745 486 300 11 42 522 26 494 2.06e-79 257
Msa1311630 MtrunA17_Chr4g0030711 33.472 481 285 11 57 517 48 513 4.39e-79 257
Msa1311630 MtrunA17_Chr4g0024771 30.402 523 324 12 11 526 13 502 7.04e-79 256
Msa1311630 MtrunA17_Chr3g0101571 30.426 516 326 11 7 517 5 492 1.09e-78 255
Msa1311630 MtrunA17_Chr6g0472311 32.117 548 316 14 3 525 2 518 1.34e-78 256
Msa1311630 MtrunA17_Chr3g0101731 31.884 483 294 12 46 517 36 494 1.56e-78 255
Msa1311630 MtrunA17_Chr5g0445441 31.081 518 323 9 4 517 47 534 2.66e-78 256
Msa1311630 MtrunA17_Chr6g0463801 32.359 479 298 8 46 520 37 493 3.77e-78 254
Msa1311630 MtrunA17_Chr4g0047641 30.888 518 327 11 5 517 18 509 5.06e-78 254
Msa1311630 MtrunA17_Chr7g0218611 32.692 468 291 10 47 509 34 482 6.34e-78 253
Msa1311630 MtrunA17_Chr5g0403321 33.539 486 291 12 45 517 33 499 1.00e-77 253
Msa1311630 MtrunA17_Chr5g0402971 44.406 286 151 4 42 324 36 316 3.56e-77 246
Msa1311630 MtrunA17_Chr4g0011881 33.473 478 287 10 40 507 25 481 4.85e-77 251
Msa1311630 MtrunA17_Chr5g0430111 36.341 410 239 8 40 444 32 424 1.37e-76 248
Msa1311630 MtrunA17_Chr4g0020041 29.771 524 323 12 5 517 6 495 1.41e-76 250
Msa1311630 MtrunA17_Chr3g0101811 32.520 492 293 13 46 517 37 509 1.43e-76 250
Msa1311630 MtrunA17_Chr5g0445381 30.725 524 328 12 6 524 38 531 1.71e-76 251
Msa1311630 MtrunA17_Chr4g0047631 31.923 520 317 13 3 517 18 505 1.87e-76 250
Msa1311630 MtrunA17_Chr4g0011981 32.927 492 296 10 39 517 19 489 1.96e-76 249
Msa1311630 MtrunA17_Chr7g0218601 32.186 494 304 14 33 517 21 492 2.14e-76 249
Msa1311630 MtrunA17_Chr5g0403351 30.470 489 305 11 42 517 30 496 2.28e-76 249
Msa1311630 MtrunA17_Chr3g0101701 31.950 482 297 12 46 517 38 498 2.68e-76 249
Msa1311630 MtrunA17_Chr4g0058261 32.172 488 303 14 42 519 59 528 2.86e-76 250
Msa1311630 MtrunA17_Chr5g0403331 30.550 527 326 11 1 517 1 497 2.88e-76 249
Msa1311630 MtrunA17_Chr5g0445451 30.116 518 328 8 4 517 6 493 3.81e-76 249
Msa1311630 MtrunA17_Chr1g0162801 32.463 536 321 14 1 526 1 505 2.57e-75 247
Msa1311630 MtrunA17_Chr3g0101651 31.893 486 296 13 44 517 36 498 4.26e-75 246
Msa1311630 MtrunA17_Chr7g0224551 32.000 500 294 11 36 513 22 497 5.25e-75 246
Msa1311630 MtrunA17_Chr4g0047691 31.081 518 323 12 5 517 20 508 6.24e-75 246
Msa1311630 MtrunA17_Chr8g0372251 32.326 430 262 9 52 472 41 450 8.41e-75 245
Msa1311630 MtrunA17_Chr5g0446161 29.679 529 333 14 5 526 6 502 1.47e-74 244
Msa1311630 MtrunA17_Chr5g0406651 32.087 508 312 9 14 517 12 490 3.26e-74 243
Msa1311630 MtrunA17_Chr7g0224561 31.928 498 297 11 36 513 22 497 3.81e-74 244
Msa1311630 MtrunA17_Chr3g0101761 31.740 523 313 15 3 517 8 494 5.97e-74 243
Msa1311630 MtrunA17_Chr3g0101801 31.887 530 313 15 3 520 11 504 7.37e-74 243
Msa1311630 MtrunA17_Chr4g0047661 30.268 522 329 12 3 517 17 510 7.42e-74 243
Msa1311630 MtrunA17_Chr1g0156081 32.406 503 320 12 5 498 15 506 8.58e-74 243
Msa1311630 MtrunA17_Chr5g0405001 28.681 523 327 10 7 517 18 506 2.03e-73 242
Msa1311630 MtrunA17_Chr3g0101751 31.358 523 315 15 3 517 15 501 2.88e-73 241
Msa1311630 MtrunA17_Chr3g0101821 33.063 493 299 12 33 517 25 494 3.33e-73 241
Msa1311630 MtrunA17_Chr5g0445421 30.695 518 304 11 4 517 80 546 1.23e-72 241
Msa1311630 MtrunA17_Chr5g0445531 30.515 485 294 11 46 517 38 492 1.91e-72 239
Msa1311630 MtrunA17_Chr4g0046681 53.883 206 94 1 325 530 31 235 2.82e-72 230
Msa1311630 MtrunA17_Chr4g0039901 31.601 481 309 8 45 522 34 497 3.38e-72 238
Msa1311630 MtrunA17_Chr5g0446151 30.550 491 307 11 44 526 39 503 1.13e-71 237
Msa1311630 MtrunA17_Chr4g0035921 30.972 494 303 12 39 513 28 502 5.78e-71 236
Msa1311630 MtrunA17_Chr5g0431501 30.977 481 309 12 52 525 39 503 1.33e-70 234
Msa1311630 MtrunA17_Chr5g0431461 30.977 481 309 12 52 525 39 503 1.33e-70 234
Msa1311630 MtrunA17_Chr4g0076161 29.887 532 334 13 1 523 1 502 3.33e-70 233
Msa1311630 MtrunA17_Chr3g0101831 30.948 517 327 11 7 517 3 495 3.68e-70 233
Msa1311630 MtrunA17_Chr1g0200961 33.402 485 297 12 44 520 27 493 3.73e-70 233
Msa1311630 MtrunA17_Chr8g0357421 30.651 522 321 13 7 517 3 494 8.15e-70 232
Msa1311630 MtrunA17_Chr1g0213671 32.136 501 310 15 35 523 24 506 2.03e-69 231
Msa1311630 MtrunA17_Chr3g0101741 31.579 437 272 10 85 517 3 416 3.06e-69 228
Msa1311630 MtrunA17_Chr1g0160851 31.056 483 304 13 45 520 33 493 8.54e-69 229
Msa1311630 MtrunA17_Chr6g0463791 31.094 521 314 13 7 517 7 492 9.31e-69 229
Msa1311630 MtrunA17_Chr2g0280261 33.401 494 300 11 41 528 30 500 3.92e-68 228
Msa1311630 MtrunA17_Chr4g0046691 40.845 284 153 5 41 324 34 302 4.47e-68 221
Msa1311630 MtrunA17_Chr4g0046351 30.769 494 295 14 47 517 36 505 4.18e-67 225
Msa1311630 MtrunA17_Chr1g0167321 31.679 524 316 17 17 530 13 504 4.46e-67 225
Msa1311630 MtrunA17_Chr4g0046321 30.364 494 297 14 47 517 36 505 1.04e-66 224
Msa1311630 MtrunA17_Chr6g0451811 48.341 211 106 2 323 531 1 210 1.27e-66 214
Msa1311630 MtrunA17_Chr8g0357431 29.644 533 333 12 7 527 3 505 1.42e-66 224
Msa1311630 MtrunA17_Chr4g0046331 28.464 534 329 14 10 517 1 507 2.52e-66 223
Msa1311630 MtrunA17_Chr7g0265611 28.980 490 327 8 35 517 35 510 1.24e-65 221
Msa1311630 MtrunA17_Chr4g0046661 53.023 215 100 1 311 525 11 224 2.30e-65 212
Msa1311630 MtrunA17_Chr4g0046671 40.636 283 154 6 47 324 45 318 2.45e-65 215
Msa1311630 MtrunA17_Chr5g0431511 28.189 486 328 10 46 525 33 503 9.85e-65 219
Msa1311630 MtrunA17_Chr6g0451771 47.887 213 108 2 323 533 18 229 1.26e-64 210
Msa1311630 MtrunA17_Chr1g0205361 30.247 486 310 11 45 523 33 496 1.36e-64 218
Msa1311630 MtrunA17_Chr5g0395321 30.874 515 307 16 17 520 18 494 2.18e-64 219
Msa1311630 MtrunA17_Chr5g0395331 30.595 487 310 12 43 520 34 501 2.45e-64 218
Msa1311630 MtrunA17_Chr1g0164211 31.967 488 306 13 39 520 23 490 7.79e-64 216
Msa1311630 MtrunA17_Chr5g0419451 29.668 482 309 13 46 523 61 516 1.01e-63 216
Msa1311630 MtrunA17_Chr6g0451801 39.527 296 166 7 39 324 31 323 1.57e-63 210
Msa1311630 MtrunA17_Chr5g0402981 48.744 199 100 2 335 532 2 199 3.45e-63 205
Msa1311630 MtrunA17_Chr3g0107611 28.731 536 365 8 4 530 10 537 1.31e-62 214
Msa1311630 MtrunA17_Chr8g0356001 28.719 484 324 9 41 520 36 502 2.96e-62 212
Msa1311630 MtrunA17_Chr7g0246221 29.569 487 316 12 42 519 30 498 1.44e-61 210
Msa1311630 MtrunA17_Chr2g0314731 28.687 495 325 10 5 498 1 468 2.50e-60 206
Msa1311630 MtrunA17_Chr2g0314721 29.424 486 317 9 14 498 19 479 4.33e-60 206
Msa1311630 MtrunA17_Chr5g0395381 29.151 518 293 14 14 520 15 469 6.31e-60 205
Msa1311630 MtrunA17_Chr8g0346261 31.470 483 305 14 46 524 85 545 8.96e-60 206
Msa1311630 MtrunA17_Chr8g0370641 28.762 525 345 9 17 530 18 524 1.14e-59 206
Msa1311630 MtrunA17_Chr1g0205371 29.848 526 331 11 1 520 1 494 5.43e-59 203
Msa1311630 MtrunA17_Chr8g0370651 28.083 527 354 10 14 530 17 528 1.43e-58 203
Msa1311630 MtrunA17_Chr1g0197871 29.550 467 290 12 39 492 20 460 3.87e-58 201
Msa1311630 MtrunA17_Chr8g0355961 29.253 482 322 9 42 520 37 502 5.78e-58 201
Msa1311630 MtrunA17_Chr1g0197851 29.638 469 282 12 50 492 14 460 5.95e-58 200
Msa1311630 MtrunA17_Chr1g0197881 30.211 427 272 10 70 492 55 459 4.03e-57 198
Msa1311630 MtrunA17_Chr3g0107541 29.461 482 323 9 56 530 60 531 8.37e-57 198
Msa1311630 MtrunA17_Chr1g0197891 30.211 427 272 10 70 492 56 460 1.11e-56 197
Msa1311630 MtrunA17_Chr7g0246151 28.322 459 312 9 65 519 52 497 1.18e-56 197
Msa1311630 MtrunA17_Chr1g0176831 28.571 434 294 6 65 498 81 498 1.81e-56 197
Msa1311630 MtrunA17_Chr4g0046701 54.878 164 73 1 367 530 1 163 2.24e-56 186
Msa1311630 MtrunA17_Chr7g0246121 28.051 467 305 10 65 521 52 497 6.79e-56 195
Msa1311630 MtrunA17_Chr5g0430071 34.132 334 198 7 200 525 39 358 1.66e-55 190
Msa1311630 MtrunA17_Chr1g0200951 29.691 485 308 15 52 525 67 529 3.61e-54 191
Msa1311630 MtrunA17_Chr5g0432751 28.070 456 305 10 45 493 32 471 8.18e-52 184
Msa1311630 MtrunA17_Chr7g0246131 28.743 501 323 14 35 522 23 502 2.14e-50 180
Msa1311630 MtrunA17_Chr8g0377341 29.224 438 288 13 82 518 103 519 3.82e-50 180
Msa1311630 MtrunA17_Chr1g0174431 42.365 203 110 3 329 525 5 206 9.06e-50 170
Msa1311630 MtrunA17_Chr1g0210091 28.266 467 303 13 70 523 88 535 1.97e-48 176
Msa1311630 MtrunA17_Chr5g0431591 32.822 326 199 7 197 517 1 311 1.57e-47 167
Msa1311630 MtrunA17_Chr8g0390871 43.069 202 107 4 316 513 18 215 2.50e-47 164
Msa1311630 MtrunA17_Chr7g0246181 27.332 461 314 11 65 519 52 497 6.99e-47 171
Msa1311630 MtrunA17_Chr1g0160861 31.722 331 206 9 197 520 17 334 9.41e-47 166
Msa1311630 MtrunA17_Chr1g0198191 24.381 525 367 13 6 524 15 515 1.71e-46 170
Msa1311630 MtrunA17_Chr4g0011941 40.777 206 114 4 325 527 1 201 3.29e-44 155
Msa1311630 MtrunA17_Chr4g0011851 37.089 213 126 3 318 527 9 216 3.74e-44 155
Msa1311630 MtrunA17_Chr6g0451761 32.432 296 162 5 11 304 14 273 4.36e-44 157
Msa1311630 MtrunA17_Chr2g0334021 26.598 485 317 12 52 524 41 498 1.51e-42 159
Msa1311630 MtrunA17_Chr5g0446101 30.211 331 208 8 197 523 1 312 4.98e-42 153
Msa1311630 MtrunA17_Chr4g0074581 25.152 493 336 14 46 524 69 542 4.95e-41 155
Msa1311630 MtrunA17_Chr2g0280121 25.532 470 329 9 63 525 55 510 6.91e-41 154
Msa1311630 MtrunA17_Chr2g0280081 25.641 468 323 11 66 525 555 1005 1.98e-40 156
Msa1311630 MtrunA17_Chr2g0280081 25.386 453 311 10 62 505 50 484 2.77e-36 144
Msa1311630 MtrunA17_Chr2g0310351 35.204 196 121 3 325 517 1 193 5.10e-40 144
Msa1311630 MtrunA17_Chr5g0409051 23.633 512 349 12 36 525 18 509 5.30e-40 152
Msa1311630 MtrunA17_Chr4g0058211 35.644 202 122 4 325 523 19 215 2.61e-39 142
Msa1311630 MtrunA17_Chr1g0174421 29.503 322 202 6 7 328 23 319 1.36e-38 144
Msa1311630 MtrunA17_Chr6g0463621 37.379 206 118 4 325 523 1 202 1.96e-38 139
Msa1311630 MtrunA17_Chr2g0280071 24.951 509 339 15 36 524 51 536 2.17e-38 149
Msa1311630 MtrunA17_Chr2g0280041 24.421 475 326 13 63 525 83 536 1.59e-36 142
Msa1311630 MtrunA17_Chr3g0101591 35.233 193 119 2 328 517 42 231 6.20e-36 134
Msa1311630 MtrunA17_Chr2g0314781 39.873 158 92 1 341 498 1 155 6.54e-36 132
Msa1311630 MtrunA17_Chr8g0387101 25.586 469 321 11 67 525 57 507 1.35e-35 139
Msa1311630 MtrunA17_Chr3g0086681 40.230 174 98 3 363 532 5 176 5.15e-35 129
Msa1311630 MtrunA17_Chr3g0105761 36.979 192 119 1 339 530 14 203 1.68e-34 129
Msa1311630 MtrunA17_Chr1g0156061 32.669 251 161 7 251 498 193 438 3.01e-34 135
Msa1311630 MtrunA17_Chr1g0156061 37.589 141 84 2 47 187 59 195 5.81e-23 102
Msa1311630 MtrunA17_Chr4g0011931 31.655 278 164 6 3 279 2 254 3.50e-33 128
Msa1311630 MtrunA17_Chr4g0011861 30.705 241 157 5 40 279 24 255 6.40e-33 127
Msa1311630 MtrunA17_Chr5g0413911 23.121 519 349 15 35 525 33 529 1.20e-32 131
Msa1311630 MtrunA17_Chr8g0364651 23.551 535 354 14 6 525 5 499 3.23e-32 129
Msa1311630 MtrunA17_Chr5g0445761 36.782 174 107 2 325 498 1 171 4.29e-32 122
Msa1311630 MtrunA17_Chr5g0445351 38.095 168 98 3 353 517 52 216 1.35e-31 121
Msa1311630 MtrunA17_Chr5g0423621 36.994 173 98 5 351 520 14 178 2.14e-31 119
Msa1311630 MtrunA17_Chr6g0477081 29.771 262 162 5 175 435 1 241 3.04e-31 121
Msa1311630 MtrunA17_Chr5g0430151 35.754 179 108 4 351 525 1 176 4.92e-31 119
Msa1311630 MtrunA17_Chr5g0430041 37.762 143 85 2 351 492 1 140 2.56e-30 116
Msa1311630 MtrunA17_Chr4g0030741 29.900 301 178 8 56 348 74 349 2.84e-30 121
Msa1311630 MtrunA17_Chr3g0107551 30.769 208 142 2 325 531 5 211 1.21e-29 115
Msa1311630 MtrunA17_Chr3g0135841 23.950 476 319 11 45 491 42 503 1.77e-29 122
Msa1311630 MtrunA17_Chr3g0116731 40.000 150 73 3 376 525 1 133 1.09e-28 110
Msa1311630 MtrunA17_Chr1g0207851 29.323 266 161 8 57 309 49 300 2.43e-28 116
Msa1311630 MtrunA17_Chr1g0151221 24.948 477 308 15 45 491 39 495 1.69e-27 116
Msa1311630 MtrunA17_Chr5g0445371 29.044 272 145 7 261 525 1 231 1.83e-27 110
Msa1311630 MtrunA17_Chr3g0117301 40.171 117 67 1 376 492 1 114 2.43e-27 106
Msa1311630 MtrunA17_Chr2g0280011 30.693 202 134 2 329 525 12 212 2.62e-27 109
Msa1311630 MtrunA17_Chr5g0430171 33.803 213 126 5 40 252 32 229 4.29e-27 109
Msa1311630 MtrunA17_Chr5g0445751 27.946 297 189 8 14 309 19 291 5.12e-27 111
Msa1311630 MtrunA17_Chr0c19g0493771 23.423 444 308 12 66 500 205 625 6.17e-27 115
Msa1311630 MtrunA17_Chr5g0396521 31.604 212 116 6 323 507 346 555 4.57e-25 108
Msa1311630 MtrunA17_Chr1g0163451 30.126 239 156 4 272 501 267 503 5.04e-25 108
Msa1311630 MtrunA17_Chr3g0101541 35.252 139 84 2 373 508 1 136 1.39e-24 99.4
Msa1311630 MtrunA17_Chr8g0364631 24.200 500 333 13 46 524 32 506 3.28e-24 105
Msa1311630 MtrunA17_Chr2g0280061 29.208 202 137 2 329 525 12 212 8.48e-24 99.4
Msa1311630 MtrunA17_Chr1g0163371 33.161 193 120 4 315 501 12 201 1.03e-23 99.8
Msa1311630 MtrunA17_Chr2g0293411 25.052 483 293 20 9 472 6 438 1.95e-23 103
Msa1311630 MtrunA17_Chr6g0463611 27.236 246 164 4 41 284 44 276 2.16e-23 101
Msa1311630 MtrunA17_Chr4g0076171 34.375 192 93 6 341 523 1 168 2.86e-23 96.7
Msa1311630 MtrunA17_Chr5g0445411 36.154 130 83 0 46 175 45 174 3.20e-23 96.7
Msa1311630 MtrunA17_Chr1g0203141 23.448 435 287 12 69 491 84 484 4.13e-23 102
Msa1311630 MtrunA17_Chr6g0458571 40.351 114 61 2 11 124 26 132 1.58e-22 93.6
Msa1311630 MtrunA17_Chr5g0444981 40.268 149 85 3 344 492 30 174 2.15e-22 95.5
Msa1311630 MtrunA17_Chr1g0163281 28.000 250 163 4 262 501 256 498 2.25e-22 100
Msa1311630 MtrunA17_Chr1g0163421 28.571 245 152 6 272 501 283 519 2.30e-22 100
Msa1311630 MtrunA17_Chr1g0163491 29.537 281 185 6 231 501 223 500 4.51e-22 99.8
Msa1311630 MtrunA17_Chr4g0028321 35.484 124 75 2 393 513 25 146 1.53e-21 91.7
Msa1311630 MtrunA17_Chr5g0445361 37.705 122 70 3 399 517 12 130 1.87e-21 90.5
Msa1311630 MtrunA17_Chr4g0063221 23.709 426 277 13 79 489 94 486 5.49e-21 96.3
Msa1311630 MtrunA17_Chr5g0429651 25.553 407 259 16 137 524 127 508 9.54e-21 95.5
Msa1311630 MtrunA17_Chr1g0179811 28.634 227 133 4 283 509 329 526 1.34e-20 95.1
Msa1311630 MtrunA17_Chr1g0183611 25.862 348 230 12 171 501 68 404 1.90e-20 93.6
Msa1311630 MtrunA17_Chr2g0310371 38.843 121 72 2 45 165 27 145 4.17e-20 87.0
Msa1311630 MtrunA17_Chr1g0203151 26.866 268 174 9 262 523 259 510 5.03e-20 93.2
Msa1311630 MtrunA17_Chr3g0105751 28.269 283 194 6 45 324 46 322 7.83e-20 91.7
Msa1311630 MtrunA17_Chr3g0128461 23.649 444 285 17 67 494 91 496 9.72e-20 92.4
Msa1311630 MtrunA17_Chr1g0171041 28.115 313 194 11 228 513 197 505 1.01e-19 92.4
Msa1311630 MtrunA17_Chr8g0336361 24.536 485 276 19 62 494 84 530 1.39e-19 92.0
Msa1311630 MtrunA17_Chr6g0484771 39.062 128 73 2 83 209 1 124 2.28e-19 84.7
Msa1311630 MtrunA17_Chr1g0163461 26.971 241 155 5 272 498 262 495 2.46e-19 91.3
Msa1311630 MtrunA17_Chr1g0163391 26.757 370 230 15 175 524 154 502 2.65e-19 90.9
Msa1311630 MtrunA17_Chr8g0339861 25.605 496 277 24 6 472 5 437 1.03e-18 89.0
Msa1311630 MtrunA17_Chr2g0293421 23.567 471 302 19 36 493 35 460 1.56e-18 88.6
Msa1311630 MtrunA17_Chr7g0248991 31.073 177 92 5 284 460 221 367 1.63e-18 87.4
Msa1311630 MtrunA17_Chr5g0431631 37.500 112 70 0 46 157 50 161 1.76e-18 82.8
Msa1311630 MtrunA17_Chr6g0479681 22.965 479 314 18 67 523 83 528 3.11e-18 87.8
Msa1311630 MtrunA17_Chr1g0163211 30.698 215 137 5 311 524 298 501 3.26e-18 87.8
Msa1311630 MtrunA17_Chr8g0351401 25.132 378 237 16 137 491 124 478 3.73e-18 87.4
Msa1311630 MtrunA17_Chr6g0472221 22.902 441 293 16 63 491 90 495 4.79e-18 87.4
Msa1311630 MtrunA17_Chr1g0163511 29.231 195 130 4 313 501 306 498 7.46e-18 86.7
Msa1311630 MtrunA17_Chr1g0184461 28.342 187 128 4 310 493 290 473 7.79e-18 86.7
Msa1311630 MtrunA17_Chr3g0107561 25.987 304 208 7 6 302 7 300 1.44e-17 84.0
Msa1311630 MtrunA17_Chr4g0004481 25.292 257 179 6 271 522 242 490 1.56e-17 85.5
Msa1311630 MtrunA17_Chr4g0030761 34.641 153 71 6 376 517 1 135 2.21e-17 79.3
Msa1311630 MtrunA17_Chr8g0381571 27.468 233 142 7 252 476 231 444 2.40e-17 84.7
Msa1311630 MtrunA17_Chr8g0381541 27.468 233 142 7 252 476 231 444 2.83e-17 84.7
Msa1311630 MtrunA17_Chr1g0163351 28.054 221 146 5 311 524 291 505 4.35e-17 84.3
Msa1311630 MtrunA17_Chr8g0364081 21.705 516 350 17 9 495 24 514 5.58e-17 84.0
Msa1311630 MtrunA17_Chr3g0117321 36.283 113 70 1 53 165 14 124 7.08e-17 77.0
Msa1311630 MtrunA17_Chr8g0372591 29.752 121 85 0 325 445 3 123 7.83e-17 77.4
Msa1311630 MtrunA17_Chr8g0371761 28.767 146 93 1 344 478 1 146 8.81e-17 77.4
Msa1311630 MtrunA17_Chr6g0449331 22.432 370 253 15 175 524 160 515 1.28e-16 82.8
Msa1311630 MtrunA17_Chr2g0313781 23.298 382 240 15 137 492 144 498 1.80e-16 82.4
Msa1311630 MtrunA17_Chr1g0204271 23.720 371 241 12 137 488 124 471 2.42e-16 82.0
Msa1311630 MtrunA17_Chr1g0154731 21.810 431 291 15 71 492 80 473 2.82e-16 81.6
Msa1311630 MtrunA17_Chr8g0351391 23.797 374 242 12 137 491 130 479 2.83e-16 81.6
Msa1311630 MtrunA17_Chr1g0163501 28.718 195 131 4 315 503 288 480 3.23e-16 81.3
Msa1311630 MtrunA17_Chr5g0400421 28.387 155 99 3 323 473 296 442 4.38e-16 80.9
Msa1311630 MtrunA17_Chr1g0163431 28.085 235 156 5 228 450 161 394 5.10e-16 80.5
Msa1311630 MtrunA17_Chr2g0308651 28.495 186 126 4 310 492 204 385 7.24e-16 79.7
Msa1311630 MtrunA17_Chr8g0369791 25.641 468 270 27 35 483 24 432 8.21e-16 80.1
Msa1311630 MtrunA17_Chr7g0227281 22.923 349 248 9 182 524 161 494 1.19e-15 79.7
Msa1311630 MtrunA17_Chr2g0288661 24.036 441 281 19 67 491 85 487 1.39e-15 79.3
Msa1311630 MtrunA17_Chr6g0472171 34.211 114 70 3 379 491 18 127 1.60e-15 74.3
Msa1311630 MtrunA17_Chr5g0400411 27.363 201 131 5 277 473 252 441 1.64e-15 79.3
Msa1311630 MtrunA17_Chr1g0184421 27.273 187 130 4 310 493 290 473 1.92e-15 79.0
Msa1311630 MtrunA17_Chr2g0313771 23.744 438 291 17 67 492 87 493 2.64e-15 78.6
Msa1311630 MtrunA17_Chr4g0046651 33.333 105 59 3 130 228 1 100 2.73e-15 72.4
Msa1311630 MtrunA17_Chr1g0163401 24.590 366 253 11 175 524 154 512 2.85e-15 78.6
Msa1311630 MtrunA17_Chr6g0449341 24.400 250 176 8 283 524 319 563 6.26e-15 77.8
Msa1311630 MtrunA17_Chr4g0076181 43.678 87 46 1 85 171 3 86 7.16e-15 72.4
Msa1311630 MtrunA17_Chr1g0164321 24.335 263 178 8 285 533 301 556 9.02e-15 77.0
Msa1311630 MtrunA17_Chr8g0351311 23.622 381 235 15 137 491 130 480 9.85e-15 76.6
Msa1311630 MtrunA17_Chr6g0449361 21.429 378 269 12 163 524 138 503 1.35e-14 76.3
Msa1311630 MtrunA17_Chr5g0431601 38.272 81 49 1 85 165 3 82 1.84e-14 68.9
Msa1311630 MtrunA17_Chr1g0182861 32.479 117 74 3 379 494 23 135 1.90e-14 71.2
Msa1311630 MtrunA17_Chr7g0260831 26.203 187 132 4 310 493 288 471 2.93e-14 75.5
Msa1311630 MtrunA17_Chr2g0307291 25.333 375 229 17 137 492 146 488 3.80e-14 75.1
Msa1311630 MtrunA17_Chr8g0380471 26.908 249 162 6 281 523 241 475 4.03e-14 74.7
Msa1311630 MtrunA17_Chr4g0038271 23.372 261 180 6 285 533 317 569 4.81e-14 74.7
Msa1311630 MtrunA17_Chr2g0321171 23.702 443 290 16 90 519 86 493 6.55e-14 74.3
Msa1311630 MtrunA17_Chr8g0387001 24.439 401 271 14 137 524 124 505 7.18e-14 73.9
Msa1311630 MtrunA17_Chr8g0372341 27.848 158 113 1 54 210 52 209 7.44e-14 70.9
Msa1311630 MtrunA17_Chr5g0430051 43.678 87 46 3 40 126 33 116 1.14e-13 67.8
Msa1311630 MtrunA17_Chr6g0449351 21.690 355 244 15 164 498 99 439 1.25e-13 73.2
Msa1311630 MtrunA17_Chr8g0372711 27.136 199 132 5 297 491 265 454 1.34e-13 73.2
Msa1311630 MtrunA17_Chr4g0056981 40.278 72 43 0 351 422 1 72 2.43e-13 65.1
Msa1311630 MtrunA17_Chr7g0227291 20.994 362 262 10 171 524 149 494 2.72e-13 72.4
Msa1311630 MtrunA17_Chr3g0089351 27.064 218 137 7 278 491 166 365 3.16e-13 71.6
Msa1311630 MtrunA17_Chr7g0260821 26.203 187 132 4 310 493 289 472 3.92e-13 71.6
Msa1311630 MtrunA17_Chr1g0193811 22.152 474 311 17 67 523 83 515 7.34e-13 70.9
Msa1311630 MtrunA17_Chr8g0348751 28.293 205 131 7 297 489 278 478 7.87e-13 70.9
Msa1311630 MtrunA17_Chr7g0262111 24.654 434 280 16 67 492 81 475 8.39e-13 70.9
Msa1311630 MtrunA17_Chr8g0351461 23.483 379 256 13 137 498 123 484 2.00e-12 69.7
Msa1311630 MtrunA17_Chr6g0449381 23.602 322 216 14 181 487 165 471 2.48e-12 69.3
Msa1311630 MtrunA17_Chr8g0372331 29.688 128 88 2 404 530 3 129 2.62e-12 64.3
Msa1311630 MtrunA17_Chr5g0445341 36.585 82 51 1 85 165 3 84 4.98e-12 62.0
Msa1311630 MtrunA17_Chr4g0067191 22.762 391 235 15 137 485 113 478 9.57e-12 67.4
Msa1311630 MtrunA17_Chr8g0351441 23.421 380 255 13 137 498 123 484 1.64e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311630 AT3G25180.1 48.703 501 246 5 33 533 26 515 2.42e-172 497
Msa1311630 AT4G31970.1 48.367 490 247 5 47 530 33 522 1.00e-166 483
Msa1311630 AT4G31940.1 48.269 491 247 5 47 530 33 523 3.51e-164 476
Msa1311630 AT4G31950.1 44.807 491 252 6 47 530 33 511 3.50e-141 417
Msa1311630 AT2G25160.1 38.619 536 307 8 1 531 1 519 6.17e-122 369
Msa1311630 AT3G25180.2 46.296 378 195 4 33 410 26 395 3.00e-116 350
Msa1311630 AT4G37320.1 37.311 528 287 13 1 524 1 488 2.45e-111 340
Msa1311630 AT4G37370.1 39.381 485 263 12 44 524 29 486 1.14e-107 331
Msa1311630 AT5G07990.1 36.090 532 307 11 5 530 4 508 1.55e-104 323
Msa1311630 AT4G37310.1 35.861 488 294 7 42 524 27 500 1.09e-103 321
Msa1311630 AT4G37430.1 35.934 487 282 10 46 524 28 492 1.54e-103 320
Msa1311630 AT2G23190.1 39.315 496 268 12 36 524 63 532 3.23e-103 321
Msa1311630 AT4G37360.1 38.017 484 273 9 44 524 29 488 1.70e-101 315
Msa1311630 AT4G37330.1 35.260 519 296 10 8 524 5 485 1.72e-100 312
Msa1311630 AT4G37340.1 36.961 487 275 10 44 524 29 489 1.75e-100 312
Msa1311630 AT5G67310.1 34.051 511 299 8 9 517 18 492 2.84e-99 309
Msa1311630 AT4G37400.1 35.805 472 277 9 56 524 41 489 1.18e-98 308
Msa1311630 AT5G36220.1 34.160 524 304 13 7 524 6 494 8.09e-97 303
Msa1311630 AT2G23220.1 38.066 486 270 12 44 524 45 504 5.49e-93 293
Msa1311630 AT4G37410.1 34.711 484 284 12 47 524 32 489 9.22e-93 292
Msa1311630 AT3G28740.1 37.654 486 272 12 44 524 38 497 2.90e-91 289
Msa1311630 AT5G57220.1 35.181 469 277 9 46 513 30 472 9.94e-90 284
Msa1311630 AT2G42250.1 32.298 483 308 7 40 517 35 503 7.52e-87 277
Msa1311630 AT2G25160.2 37.713 411 237 6 1 408 1 395 1.35e-83 266
Msa1311630 AT5G06900.1 31.836 512 317 9 6 517 6 485 1.55e-82 266
Msa1311630 AT4G12320.1 34.845 485 296 11 46 525 42 511 2.45e-82 266
Msa1311630 AT3G26330.1 32.389 494 306 11 43 529 28 500 8.88e-80 258
Msa1311630 AT1G01280.1 30.670 463 312 4 70 530 54 509 9.11e-80 259
Msa1311630 AT4G12300.1 33.135 504 303 12 37 525 25 509 1.23e-78 256
Msa1311630 AT3G26300.1 30.754 517 323 12 14 523 6 494 1.26e-77 253
Msa1311630 AT3G48280.1 31.250 496 303 11 39 525 23 489 1.54e-77 252
Msa1311630 AT1G66540.1 36.962 395 222 9 134 524 4 375 3.83e-77 248
Msa1311630 AT3G48270.1 32.640 481 288 15 44 517 30 481 7.72e-77 251
Msa1311630 AT3G48310.1 31.381 478 293 13 47 517 33 482 2.59e-76 249
Msa1311630 AT3G26290.1 31.950 482 301 11 43 517 29 490 4.75e-75 246
Msa1311630 AT4G12310.1 32.083 480 296 8 56 525 54 513 6.19e-75 246
Msa1311630 AT3G26290.2 31.950 482 301 11 43 517 42 503 8.11e-75 246
Msa1311630 AT5G10610.1 29.065 492 322 10 35 523 22 489 8.13e-75 246
Msa1311630 AT5G04330.1 31.884 483 305 11 52 525 38 505 1.55e-74 245
Msa1311630 AT5G57260.1 31.185 481 302 12 47 517 32 493 2.54e-74 244
Msa1311630 AT4G31500.1 31.799 478 307 10 45 517 28 491 2.64e-74 244
Msa1311630 AT3G26310.1 30.847 496 310 13 42 525 21 495 2.68e-74 244
Msa1311630 AT2G40890.1 30.242 496 322 10 45 533 26 504 2.76e-74 244
Msa1311630 AT2G45560.1 32.225 481 291 12 53 520 45 503 2.89e-74 244
Msa1311630 AT5G44620.1 33.262 466 292 9 55 517 55 504 1.34e-73 243
Msa1311630 AT3G48300.1 31.120 482 299 13 44 520 25 478 1.55e-73 242
Msa1311630 AT3G48300.2 31.120 482 299 13 44 520 27 480 1.63e-73 242
Msa1311630 AT1G74550.1 31.950 482 291 12 55 530 36 486 5.20e-73 240
Msa1311630 AT3G26320.1 30.675 489 311 11 42 523 27 494 6.90e-73 240
Msa1311630 AT3G48290.1 31.470 483 297 13 44 520 32 486 1.68e-72 239
Msa1311630 AT4G13310.1 31.405 484 302 12 42 517 29 490 1.96e-72 239
Msa1311630 AT5G10600.1 28.067 481 324 9 45 523 45 505 2.25e-72 239
Msa1311630 AT3G32047.1 32.522 452 283 11 57 505 53 485 3.30e-72 239
Msa1311630 AT2G14100.1 31.723 476 303 10 57 528 54 511 2.10e-71 237
Msa1311630 AT5G25120.1 31.933 476 294 12 53 520 36 489 2.49e-71 236
Msa1311630 AT2G30770.1 30.705 482 299 13 46 517 33 489 3.22e-71 236
Msa1311630 AT4G22710.1 30.233 473 310 9 56 525 63 518 2.16e-70 234
Msa1311630 AT1G13080.1 31.148 488 302 15 46 520 31 497 4.35e-70 233
Msa1311630 AT5G25140.1 31.068 515 318 14 15 520 3 489 6.30e-70 233
Msa1311630 AT3G48320.1 30.882 476 298 10 47 517 33 482 8.19e-70 232
Msa1311630 AT1G50520.1 31.470 483 309 12 56 532 53 519 9.74e-70 233
Msa1311630 AT4G13290.1 30.435 483 305 11 40 517 27 483 2.20e-69 231
Msa1311630 AT4G22690.1 30.416 457 299 8 72 525 109 549 2.30e-69 233
Msa1311630 AT4G36220.1 30.533 488 304 11 54 525 48 516 2.38e-69 232
Msa1311630 AT5G25130.1 31.866 477 293 12 53 520 36 489 2.49e-69 231
Msa1311630 AT5G25180.1 32.231 484 296 12 46 520 29 489 5.90e-69 230
Msa1311630 AT3G26270.1 30.928 485 295 11 46 511 32 495 2.27e-68 229
Msa1311630 AT3G48290.2 30.255 509 295 15 44 520 32 512 7.44e-68 228
Msa1311630 AT4G12330.1 30.968 465 301 9 56 517 56 503 9.46e-68 228
Msa1311630 AT2G30750.1 30.515 485 308 13 40 517 27 489 1.01e-67 227
Msa1311630 AT2G45550.1 30.417 480 309 10 46 517 38 500 1.41e-67 227
Msa1311630 AT2G45570.1 32.700 474 293 12 56 520 48 504 1.45e-67 227
Msa1311630 AT3G20110.1 29.560 477 308 10 52 524 45 497 2.43e-67 226
Msa1311630 AT5G24950.1 29.735 491 309 13 40 519 26 491 6.35e-67 224
Msa1311630 AT3G26280.1 30.444 496 308 12 46 527 32 504 9.35e-67 224
Msa1311630 AT5G42590.1 30.769 520 319 13 9 519 5 492 9.57e-67 224
Msa1311630 AT4G39950.1 30.427 539 343 15 5 533 24 540 1.10e-66 225
Msa1311630 AT3G26280.2 30.444 496 308 12 46 527 49 521 1.17e-66 224
Msa1311630 AT4G15350.1 31.656 477 298 12 57 524 45 502 1.79e-66 224
Msa1311630 AT1G11610.1 30.480 479 304 12 46 517 33 489 2.19e-66 223
Msa1311630 AT4G39950.2 30.427 539 343 15 5 533 64 580 2.24e-66 225
Msa1311630 AT4G15330.1 29.810 473 306 11 41 508 34 485 2.37e-66 224
Msa1311630 AT2G22330.1 30.346 491 323 8 5 491 25 500 5.32e-66 223
Msa1311630 AT1G11610.2 30.462 476 302 12 46 514 33 486 6.48e-66 222
Msa1311630 AT1G13090.2 31.360 456 285 10 45 492 27 462 6.66e-66 222
Msa1311630 AT2G22330.2 30.346 491 323 8 5 491 48 523 6.94e-66 224
Msa1311630 AT2G24180.1 29.167 480 314 11 46 520 36 494 1.45e-65 221
Msa1311630 AT3G20940.1 29.583 480 313 12 46 518 42 503 2.72e-65 221
Msa1311630 AT3G20130.1 29.730 481 304 12 57 526 53 510 2.92e-65 221
Msa1311630 AT4G13770.1 29.607 483 317 11 45 520 29 495 3.43e-65 220
Msa1311630 AT3G20140.1 29.979 477 314 10 46 520 42 500 7.33e-65 219
Msa1311630 AT1G13110.1 29.139 453 301 9 45 492 31 468 2.41e-64 218
Msa1311630 AT3G61040.1 31.277 470 286 11 60 517 45 489 2.43e-64 218
Msa1311630 AT1G50560.1 30.753 478 303 12 57 525 54 512 4.86e-64 218
Msa1311630 AT3G20120.4 30.105 475 305 12 57 524 52 506 1.27e-63 216
Msa1311630 AT3G20950.1 30.000 480 306 12 54 524 54 512 2.97e-63 216
Msa1311630 AT1G66540.2 36.905 336 191 7 190 524 1 316 4.06e-63 209
Msa1311630 AT3G20090.2 30.149 471 311 11 57 524 54 509 5.47e-63 215
Msa1311630 AT1G33720.1 28.958 518 331 13 9 517 11 500 8.25e-63 214
Msa1311630 AT3G26230.1 30.943 488 311 15 42 520 23 493 1.15e-62 213
Msa1311630 AT3G26200.1 30.444 496 315 12 39 523 21 497 1.28e-62 213
Msa1311630 AT5G06905.1 29.087 471 305 9 40 496 25 480 1.73e-62 213
Msa1311630 AT2G02580.1 30.502 518 321 17 15 523 7 494 2.74e-62 213
Msa1311630 AT5G47990.1 29.087 471 315 9 57 524 53 507 3.89e-62 212
Msa1311630 AT1G13710.1 29.193 483 314 14 46 524 54 512 1.61e-61 211
Msa1311630 AT2G45580.1 29.386 456 300 9 70 517 60 501 2.36e-61 210
Msa1311630 AT3G20100.1 30.063 479 308 12 56 526 51 510 2.89e-61 210
Msa1311630 AT3G26190.1 29.918 488 316 11 42 520 24 494 4.49e-61 209
Msa1311630 AT3G44250.1 31.707 492 304 13 42 522 24 494 7.10e-61 209
Msa1311630 AT3G26170.1 29.193 483 309 10 46 511 30 496 1.95e-60 207
Msa1311630 AT2G46660.1 28.866 485 316 11 44 524 69 528 2.74e-60 208
Msa1311630 AT3G26180.1 29.592 490 310 11 41 511 23 496 3.08e-60 207
Msa1311630 AT3G52970.1 29.495 495 320 12 43 523 33 512 3.57e-60 207
Msa1311630 AT5G05260.2 28.835 541 349 15 10 532 7 529 5.96e-60 207
Msa1311630 AT3G26210.1 29.512 471 311 10 56 520 41 496 6.17e-60 206
Msa1311630 AT3G61880.1 30.522 498 314 13 32 524 59 529 8.38e-60 207
Msa1311630 AT3G61880.2 30.522 498 314 13 32 524 59 529 1.42e-59 206
Msa1311630 AT5G24960.1 30.165 484 312 12 46 523 33 496 2.27e-59 204
Msa1311630 AT4G15360.1 28.692 474 321 11 46 517 40 498 9.71e-59 204
Msa1311630 AT1G74540.1 27.528 534 311 11 5 518 3 480 1.10e-58 203
Msa1311630 AT3G26220.1 30.061 489 321 10 39 520 22 496 2.44e-58 202
Msa1311630 AT1G13100.1 29.221 462 306 9 55 511 37 482 2.86e-58 201
Msa1311630 AT1G74110.1 28.659 492 319 15 46 524 64 536 4.19e-58 202
Msa1311630 AT3G26830.1 30.131 458 288 11 45 492 27 462 5.16e-58 201
Msa1311630 AT5G36220.2 33.234 337 205 6 188 524 32 348 1.24e-57 196
Msa1311630 AT3G20080.2 31.301 492 307 12 43 524 39 509 1.90e-57 200
Msa1311630 AT3G20080.1 31.301 492 307 12 43 524 39 509 1.90e-57 200
Msa1311630 AT3G52970.2 28.515 505 326 12 43 523 33 526 6.00e-57 199
Msa1311630 AT3G20130.2 30.000 430 268 11 108 526 75 482 1.61e-56 197
Msa1311630 AT4G15330.2 28.541 473 284 12 41 508 34 457 1.66e-56 197
Msa1311630 AT3G20960.2 29.913 458 294 12 75 524 69 507 2.37e-56 197
Msa1311630 AT2G27000.1 29.325 474 312 13 57 524 50 506 2.53e-56 197
Msa1311630 AT5G35715.1 29.605 456 291 12 85 529 3 439 3.27e-56 195
Msa1311630 AT1G28430.1 27.848 474 321 10 57 525 51 508 3.20e-55 194
Msa1311630 AT3G53280.1 29.435 496 306 14 42 520 24 492 7.82e-55 192
Msa1311630 AT5G42580.1 29.204 452 291 10 70 518 62 487 1.51e-54 192
Msa1311630 AT1G01190.1 28.189 486 318 14 44 524 72 531 1.59e-54 192
Msa1311630 AT3G26150.1 28.310 491 315 12 41 511 23 496 1.89e-54 191
Msa1311630 AT5G05260.1 27.872 531 331 13 14 532 7 497 2.12e-54 191
Msa1311630 AT1G01190.2 28.189 486 318 14 44 524 77 536 2.28e-54 192
Msa1311630 AT3G53300.1 29.065 492 319 12 45 526 27 498 5.24e-54 190
Msa1311630 AT3G26160.1 28.306 484 312 11 46 511 30 496 3.18e-53 188
Msa1311630 AT2G30490.1 29.437 462 305 13 70 524 56 503 3.74e-53 188
Msa1311630 AT5G09970.1 29.485 485 311 17 46 521 70 532 4.23e-52 186
Msa1311630 AT1G16410.1 26.923 546 361 16 3 530 8 533 1.61e-51 184
Msa1311630 AT1G58260.1 26.063 541 370 10 4 533 7 528 3.19e-51 183
Msa1311630 AT4G15380.1 28.602 465 305 12 75 533 70 513 1.09e-50 182
Msa1311630 AT1G16400.1 27.037 540 360 16 7 530 11 532 1.12e-50 182
Msa1311630 AT4G13310.2 30.423 378 246 7 42 418 29 390 1.77e-50 178
Msa1311630 AT3G20960.1 30.000 420 267 12 113 524 4 404 2.76e-50 178
Msa1311630 AT1G79370.1 27.158 556 352 19 7 533 10 541 2.92e-49 178
Msa1311630 AT2G05180.1 28.934 394 255 9 57 444 52 426 3.34e-49 176
Msa1311630 AT5G04660.1 26.226 469 323 9 64 525 60 512 7.32e-49 177
Msa1311630 AT3G20120.2 30.077 389 246 11 143 524 1 370 2.84e-48 172
Msa1311630 AT3G20120.3 30.077 389 246 11 143 524 1 370 2.84e-48 172
Msa1311630 AT3G20120.1 30.077 389 246 11 143 524 1 370 2.84e-48 172
Msa1311630 AT3G10560.1 24.335 489 348 11 42 525 42 513 3.97e-47 172
Msa1311630 AT3G20090.1 29.870 385 253 10 143 524 1 371 4.24e-47 169
Msa1311630 AT4G20240.1 29.238 407 258 11 45 444 32 415 5.25e-47 170
Msa1311630 AT5G04630.1 25.887 479 333 10 54 525 46 509 6.03e-47 171
Msa1311630 AT1G33720.4 29.243 383 247 8 143 517 2 368 5.94e-46 166
Msa1311630 AT1G33720.3 29.243 383 247 8 143 517 2 368 5.94e-46 166
Msa1311630 AT1G33720.5 29.243 383 247 8 143 517 2 368 5.94e-46 166
Msa1311630 AT2G45580.2 28.969 359 230 9 167 517 6 347 2.29e-45 163
Msa1311630 AT1G13080.2 28.756 386 243 13 148 520 13 379 3.86e-45 163
Msa1311630 AT1G33730.1 30.053 376 239 10 150 517 5 364 1.27e-44 162
Msa1311630 AT1G33730.2 30.053 376 239 10 150 517 5 364 1.27e-44 162
Msa1311630 AT1G33720.2 28.713 404 247 9 143 517 2 393 1.31e-44 162
Msa1311630 AT2G27010.1 27.463 477 299 14 57 524 46 484 2.19e-44 164
Msa1311630 AT3G20935.1 28.909 339 206 11 213 524 4 334 3.22e-44 160
Msa1311630 AT3G20080.4 29.668 391 247 11 143 524 1 372 4.63e-44 160
Msa1311630 AT3G20080.5 29.668 391 247 11 143 524 1 372 4.63e-44 160
Msa1311630 AT3G20080.6 29.668 391 247 11 143 524 1 372 4.63e-44 160
Msa1311630 AT3G20080.3 29.668 391 247 11 143 524 1 372 4.63e-44 160
Msa1311630 AT3G10570.1 25.591 465 322 10 68 525 66 513 9.89e-44 162
Msa1311630 AT5G25900.1 25.306 490 318 12 52 524 49 507 1.56e-43 162
Msa1311630 AT1G64940.1 24.624 532 356 14 9 524 6 508 2.51e-41 155
Msa1311630 AT1G64930.1 26.104 498 328 13 46 524 32 508 1.07e-39 151
Msa1311630 AT5G35917.1 26.641 518 305 18 35 532 28 490 6.32e-37 143
Msa1311630 AT1G11600.1 24.597 496 336 14 46 524 35 509 9.75e-37 143
Msa1311630 AT1G64950.1 24.949 489 341 12 47 524 34 507 2.58e-36 142
Msa1311630 AT4G20240.2 27.632 380 246 10 45 418 32 388 5.54e-36 139
Msa1311630 AT3G61040.2 28.184 369 234 8 60 419 45 391 7.78e-36 138
Msa1311630 AT5G24960.2 28.989 376 248 9 46 419 33 391 8.60e-36 138
Msa1311630 AT2G12190.1 25.319 470 327 12 47 505 34 490 2.80e-34 136
Msa1311630 AT3G26180.2 30.451 266 163 5 260 511 105 362 3.63e-34 133
Msa1311630 AT2G45580.3 26.836 354 243 7 70 418 60 402 6.55e-34 133
Msa1311630 AT3G03470.1 22.863 503 356 12 38 524 23 509 6.99e-34 135
Msa1311630 AT1G16410.2 25.708 424 283 12 3 412 8 413 8.07e-33 130
Msa1311630 AT1G64900.1 24.230 487 333 14 53 524 38 503 1.79e-31 127
Msa1311630 AT5G61320.1 25.486 463 310 11 68 524 54 487 1.72e-30 125
Msa1311630 AT3G53290.1 27.336 428 266 12 101 520 11 401 8.58e-30 121
Msa1311630 AT2G26170.1 24.569 464 311 12 46 491 46 488 5.04e-29 120
Msa1311630 AT1G31800.1 30.196 255 138 7 284 528 360 584 1.05e-26 114
Msa1311630 AT3G53130.1 30.263 228 128 5 283 509 329 526 1.25e-24 107
Msa1311630 AT1G13090.1 29.368 269 168 7 45 308 27 278 1.83e-23 101
Msa1311630 AT4G15110.1 31.132 212 117 7 323 507 354 563 2.07e-23 104
Msa1311630 AT5G24900.1 25.400 437 285 17 69 491 87 496 7.09e-23 102
Msa1311630 AT5G02900.1 26.871 294 183 12 247 514 192 479 1.35e-22 101
Msa1311630 AT2G26170.2 28.992 238 159 4 261 491 171 405 2.45e-22 100
Msa1311630 AT2G26710.1 24.524 420 286 12 79 494 95 487 3.63e-22 100
Msa1311630 AT4G39480.1 26.772 254 165 6 261 498 241 489 1.29e-21 98.6
Msa1311630 AT2G45560.2 28.358 268 167 9 53 310 45 297 1.62e-21 95.9
Msa1311630 AT5G52400.1 29.020 255 164 9 265 511 269 514 2.30e-21 97.8
Msa1311630 AT3G14610.1 25.175 429 277 16 75 492 87 482 6.35e-21 96.7
Msa1311630 AT5G24900.2 33.540 161 101 4 332 491 224 379 1.06e-20 94.7
Msa1311630 AT1G24540.1 25.194 258 173 6 281 524 269 520 4.34e-20 94.0
Msa1311630 AT5G52320.2 28.514 249 164 7 258 498 236 478 5.05e-20 93.6
Msa1311630 AT5G52320.1 28.514 249 164 7 258 498 236 478 6.24e-20 93.2
Msa1311630 AT4G32170.1 21.750 400 283 14 138 524 121 503 8.79e-20 92.8
Msa1311630 AT4G39490.1 25.606 289 185 8 247 511 223 505 1.03e-19 92.8
Msa1311630 AT1G57750.1 24.681 235 165 4 281 511 259 485 1.04e-19 92.8
Msa1311630 AT3G14640.1 24.941 425 282 17 75 491 88 483 1.32e-19 92.4
Msa1311630 AT3G14640.2 24.941 425 282 17 75 491 110 505 1.92e-19 92.0
Msa1311630 AT2G45560.3 30.622 209 126 7 53 255 45 240 3.65e-19 87.4
Msa1311630 AT4G27710.1 23.579 475 301 17 69 523 84 516 3.70e-19 91.3
Msa1311630 AT3G53305.1 32.984 191 108 4 315 505 139 309 1.00e-18 88.2
Msa1311630 AT3G14660.1 24.057 424 287 16 75 492 88 482 1.01e-18 89.7
Msa1311630 AT2G46950.1 22.687 454 311 14 78 523 148 569 1.04e-18 89.7
Msa1311630 AT1G65340.1 25.490 255 174 5 261 507 242 488 1.81e-18 89.0
Msa1311630 AT3G14620.1 24.863 366 234 15 137 491 149 484 2.93e-18 88.2
Msa1311630 AT2G42850.1 22.296 453 291 11 52 492 51 454 3.25e-18 87.8
Msa1311630 AT4G39510.1 24.221 289 203 8 247 524 222 505 3.51e-18 88.2
Msa1311630 AT3G14650.1 24.823 423 285 15 75 492 88 482 5.52e-18 87.4
Msa1311630 AT3G14630.1 23.889 360 248 10 137 492 141 478 8.27e-18 87.0
Msa1311630 AT2G23180.1 23.158 285 192 9 247 511 224 501 8.28e-18 87.0
Msa1311630 AT3G14660.2 23.913 322 214 10 178 492 39 336 1.51e-17 84.7
Msa1311630 AT2G45510.1 25.058 431 265 18 88 491 77 476 1.55e-17 85.9
Msa1311630 AT3G14630.2 23.889 360 248 10 137 492 196 533 1.65e-17 86.3
Msa1311630 AT3G14680.1 24.377 361 245 11 137 492 145 482 2.27e-17 85.5
Msa1311630 AT1G19630.1 22.200 491 314 18 14 491 9 444 3.09e-17 84.7
Msa1311630 AT1G19630.3 21.932 497 320 18 8 491 3 444 3.35e-17 84.7
Msa1311630 AT5G45340.1 24.486 486 297 20 46 522 36 460 3.71e-17 84.7
Msa1311630 AT1G13150.1 27.074 229 142 6 285 495 269 490 3.98e-17 84.7
Msa1311630 AT5G35920.1 30.769 156 97 3 382 532 6 155 4.12e-17 79.0
Msa1311630 AT2G21910.1 22.338 385 256 14 140 502 123 486 5.26e-17 84.3
Msa1311630 AT1G05160.2 24.153 443 282 19 42 472 41 441 1.26e-16 83.2
Msa1311630 AT1G05160.1 24.153 443 282 19 42 472 41 441 1.26e-16 83.2
Msa1311630 AT1G47620.1 22.553 235 175 4 293 524 285 515 2.50e-16 82.4
Msa1311630 AT3G26125.1 23.798 416 265 16 140 524 138 532 6.29e-16 81.3
Msa1311630 AT1G13140.1 24.021 383 245 16 137 494 135 496 1.43e-15 80.1
Msa1311630 AT2G27690.1 22.306 399 277 12 137 524 118 494 2.30e-15 79.3
Msa1311630 AT3G14690.2 23.953 430 280 17 75 492 123 517 2.44e-15 79.3
Msa1311630 AT3G19270.2 23.046 499 318 20 6 498 5 443 2.52e-15 79.0
Msa1311630 AT3G14690.1 24.728 368 246 15 132 492 139 482 2.97e-15 79.0
Msa1311630 AT1G13140.2 28.177 181 115 5 325 494 294 470 3.50e-15 78.6
Msa1311630 AT1G19630.2 22.494 449 288 17 8 443 3 404 5.13e-15 77.8
Msa1311630 AT2G46960.2 22.678 463 304 16 78 523 91 516 7.99e-15 77.4
Msa1311630 AT3G19270.1 22.967 492 313 20 6 491 5 436 1.14e-14 76.6
Msa1311630 AT3G56630.1 23.848 369 246 14 137 491 119 466 3.46e-14 75.5
Msa1311630 AT1G34540.1 28.241 216 142 7 283 491 257 466 3.97e-14 75.5
Msa1311630 AT2G46960.1 26.250 240 156 7 292 523 174 400 9.82e-14 73.6
Msa1311630 AT4G00360.1 26.042 288 186 11 261 528 244 524 1.32e-13 73.9
Msa1311630 AT2G34490.1 23.774 265 188 7 259 515 226 484 1.82e-13 73.2
Msa1311630 AT2G32440.2 25.472 212 143 6 294 501 268 468 1.88e-13 73.2
Msa1311630 AT2G32440.1 25.472 212 143 6 294 501 268 468 1.88e-13 73.2
Msa1311630 AT1G57750.2 25.444 169 116 3 281 445 259 421 2.69e-13 72.4
Msa1311630 AT2G28850.1 21.387 346 245 8 182 525 169 489 4.72e-13 72.0
Msa1311630 AT1G63710.1 25.405 370 241 13 137 489 124 475 6.66e-13 71.6
Msa1311630 AT2G45970.1 29.661 236 140 12 272 489 251 478 7.48e-13 71.2
Msa1311630 AT5G08250.1 21.642 402 281 13 140 524 94 478 8.20e-13 71.2
Msa1311630 AT5G08250.2 23.832 214 146 4 325 524 330 540 1.09e-12 70.9
Msa1311630 AT5G23190.1 22.768 448 293 16 80 502 101 520 3.30e-12 69.3
Msa1311630 AT1G55940.2 22.105 475 293 19 45 494 44 466 3.97e-12 68.9
Msa1311630 AT1G01600.1 29.101 189 118 7 315 489 295 481 2.97e-11 66.2
Msa1311630 AT3G50660.1 22.379 496 317 17 33 497 31 489 5.48e-11 65.5
Msa1311630 AT1G67110.1 28.758 153 101 4 346 497 340 485 9.08e-11 64.7

Find 161 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAGATGTGAAGTATTTA+TGG 0.210827 8_4:+8503409 Msa1311630:five_prime_UTR
ATACACTATGTAAGCATATT+TGG 0.247948 8_4:+8506782 Msa1311630:three_prime_UTR
TCCATGCCTCACTATCTTCT+TGG 0.256146 8_4:-8504113 None:intergenic
GTTGAAAAGGTTCTAAAATA+TGG 0.263492 8_4:-8503661 None:intergenic
ATATATATGATTGGCCCTTT+TGG 0.268077 8_4:+8506475 Msa1311630:three_prime_UTR
GACCTTCTTCCATAACTAAA+TGG 0.289205 8_4:-8506150 None:intergenic
GAAGATCCATGGAGACTTCT+TGG 0.294394 8_4:-8503450 None:intergenic
CTCTCAGGTTGAAATTCATT+AGG 0.295667 8_4:-8506069 None:intergenic
CCGAAGTGTCTCTTTGATAA+TGG 0.303713 8_4:-8505908 None:intergenic
GGCTTCTCTTATTCCTGTTA+AGG 0.304649 8_4:-8505947 None:intergenic
ATTGTTTGTTTACGTCTATT+AGG 0.313378 8_4:-8503553 None:intergenic
TCAACCATGGCTGAGAAATA+TGG 0.313658 8_4:+8503679 Msa1311630:CDS
ATAATAATTTGAAAATAAAA+AGG 0.320591 8_4:-8503472 None:intergenic
CTTATTCCTGTTAAGGGTGC+TGG 0.321080 8_4:-8505940 None:intergenic
TTGCCCCTTATGGAGATTAT+TGG 0.324571 8_4:+8503860 Msa1311630:CDS
GAGGTGGTGGGGCTTAATTT+TGG 0.333356 8_4:-8506603 None:intergenic
GCTTCTCTTATTCCTGTTAA+GGG 0.344767 8_4:-8505946 None:intergenic
TCATGTGCTGGTACAACGTT+TGG 0.351946 8_4:+8506171 Msa1311630:CDS
CTCGTTTGCTTATTAACCTA+TGG 0.354177 8_4:+8506013 Msa1311630:CDS
ATGAGTTATCGGGACAAATT+CGG 0.356127 8_4:+8506662 Msa1311630:three_prime_UTR
TCTCAGGTTGAAATTCATTA+GGG 0.368158 8_4:-8506068 None:intergenic
TGAGTTATCGGGACAAATTC+GGG 0.370191 8_4:+8506663 Msa1311630:three_prime_UTR
CATGCATGAAGTTCACGATA+TGG 0.372397 8_4:-8503333 None:intergenic
TGATAACTGTCTCCCGTTTG+TGG 0.376192 8_4:-8504395 None:intergenic
TATCTCCCTGCTGCTACATT+AGG 0.376844 8_4:-8503808 None:intergenic
ATAGTGAGGCATGGAGATTA+AGG 0.380205 8_4:+8504121 Msa1311630:CDS
TTGATTGGAGGATGAGTTAT+CGG 0.380277 8_4:+8506651 Msa1311630:three_prime_UTR
TGGGCAGGTAGGAAATTGAT+TGG 0.382001 8_4:+8506636 Msa1311630:three_prime_UTR
TACCCACCAGCACCCTTAAC+AGG 0.382590 8_4:+8505934 Msa1311630:CDS
GGAAGTACAGCAATAACATT+AGG 0.384728 8_4:+8505757 Msa1311630:CDS
CCACAAATCATGGGAGGTGG+TGG 0.385088 8_4:-8506616 None:intergenic
TCCTACCTGCCCACAAATCA+TGG 0.385215 8_4:-8506626 None:intergenic
AGATTTGTCAATGTCGTGTC+GGG 0.388642 8_4:-8506828 None:intergenic
AAGAAATTTGTGGCCACAAA+CGG 0.389963 8_4:+8504382 Msa1311630:CDS
GAAGAAGATGAAGAAATTTG+TGG 0.394019 8_4:+8504372 Msa1311630:CDS
CCAATCTTCTCCCTTAGGCT+TGG 0.398283 8_4:+8503703 Msa1311630:CDS
TGTTGTGCCTTACCTTTCAT+AGG 0.406310 8_4:+8503610 Msa1311630:CDS
AGGTAAGGCACAACATGGTT+CGG 0.407430 8_4:-8503602 None:intergenic
ATATTCTCTCGGGATATTAT+CGG 0.407884 8_4:-8506566 None:intergenic
AAACCTTAGTGGTGAATAGT+AGG 0.408234 8_4:+8503734 Msa1311630:CDS
CCTTTGGATGGTTTATAAGT+AGG 0.410257 8_4:-8505792 None:intergenic
AAAACAAGCACAGCAAGAAT+TGG 0.411036 8_4:+8505819 Msa1311630:CDS
GAAGAGGACTGCTAAGGAAA+TGG 0.412580 8_4:+8504245 Msa1311630:CDS
TACTATTCACCACTAAGGTT+TGG 0.415021 8_4:-8503732 None:intergenic
ACTTTGGCTAGGTTGATTCA+AGG 0.416065 8_4:+8506213 Msa1311630:CDS
CACCACCTCCCATGATTTGT+GGG 0.418636 8_4:+8506617 Msa1311630:three_prime_UTR
AAGTTGCACAATCATCAATA+AGG 0.422709 8_4:-8503509 None:intergenic
CAAACATAGGAAAAGACAAA+TGG 0.425719 8_4:+8505845 Msa1311630:CDS
TGCAAAGGGACCCACAAGTA+TGG 0.429584 8_4:+8506040 Msa1311630:CDS
CCACCACCTCCCATGATTTG+TGG 0.433140 8_4:+8506616 Msa1311630:three_prime_UTR
AATCATCAATAAGGCTAAGA+TGG 0.435832 8_4:-8503500 None:intergenic
ATAGTTGGCAAGAGATTTAG+TGG 0.436461 8_4:+8504078 Msa1311630:CDS
TTCGCCAATAATCTCCATAA+GGG 0.440258 8_4:-8503864 None:intergenic
ACTCCTTCAATCATATCAAC+TGG 0.440762 8_4:-8506264 None:intergenic
CTTTGGATGGTTTATAAGTA+GGG 0.440861 8_4:-8505791 None:intergenic
AAAATAATCATATATATGAT+TGG 0.446887 8_4:+8506466 Msa1311630:three_prime_UTR
ATGCTATTCCTAGCCTAAGT+TGG 0.446932 8_4:+8504193 Msa1311630:CDS
TTTCTCAGCCATGGTTGAAA+AGG 0.451409 8_4:-8503674 None:intergenic
GGTAAGGCACAACATGGTTC+GGG 0.452040 8_4:-8503601 None:intergenic
TCTAGCATTCATGTGGATCA+AGG 0.455837 8_4:-8506750 None:intergenic
TTCCCTACTATTCACCACTA+AGG 0.457474 8_4:-8503737 None:intergenic
CTGTACTTCCTGAGGCTGTA+AGG 0.458373 8_4:-8505744 None:intergenic
AAGATCCATGGAGACTTCTT+GGG 0.459033 8_4:-8503449 None:intergenic
TGGATTTCATTCTTGATAAG+TGG 0.459646 8_4:+8504265 Msa1311630:CDS
ATTCTTATCCTTACAGCCTC+AGG 0.463217 8_4:+8505736 Msa1311630:CDS
ATGGTCCAATCTTCTCCCTT+AGG 0.463960 8_4:+8503698 Msa1311630:CDS
AGAAATTTGTGGCCACAAAC+GGG 0.464823 8_4:+8504383 Msa1311630:CDS
GGATATGTGCCATTTAGTTA+TGG 0.469756 8_4:+8506141 Msa1311630:CDS
GCAAGTGTTGCATTTGACTT+TGG 0.469819 8_4:+8506197 Msa1311630:CDS
GGTCCCTTTGCAATTTCCAT+AGG 0.473199 8_4:-8506029 None:intergenic
ATTATTGAAAATGAATATGT+AGG 0.474578 8_4:-8503365 None:intergenic
TAGGGTTTGACCATACTTGT+GGG 0.476283 8_4:-8506050 None:intergenic
CTTGAAAATCAAACCAACTT+AGG 0.478835 8_4:-8504206 None:intergenic
TGATCTAGAAACTTGCTCAT+AGG 0.479773 8_4:-8504027 None:intergenic
TGGTTGCAACCAAACCTTAG+TGG 0.483377 8_4:+8503723 Msa1311630:CDS
TTTGGTTGCAACCAAGCCTA+AGG 0.484787 8_4:-8503714 None:intergenic
TGCCATTTAGTTATGGAAGA+AGG 0.485792 8_4:+8506148 Msa1311630:CDS
TTTCGCCAATAATCTCCATA+AGG 0.487721 8_4:-8503865 None:intergenic
ACCTCCCATGATTTGTGGGC+AGG 0.487873 8_4:+8506621 Msa1311630:three_prime_UTR
TAAATGTGCAGATGATTTCA+TGG 0.488450 8_4:+8504329 Msa1311630:CDS
TCAAGACCTAATGTAGCAGC+AGG 0.489816 8_4:+8503802 Msa1311630:CDS
TATTCTCTCGGGATATTATC+GGG 0.492846 8_4:-8506565 None:intergenic
ACTGATGATTGCCACGTGGC+AGG 0.492990 8_4:+8505970 Msa1311630:CDS
ACAAATCATGGGAGGTGGTG+GGG 0.494534 8_4:-8506614 None:intergenic
ATAATTGTGAAGATGATAGT+TGG 0.499191 8_4:+8504063 Msa1311630:CDS
CTTTAGTGCTTAGAAGATGA+AGG 0.503772 8_4:-8503636 None:intergenic
TTAGGGTTTGACCATACTTG+TGG 0.503962 8_4:-8506051 None:intergenic
TATGATTGAAGGAGTAGGAT+TGG 0.506435 8_4:+8506272 Msa1311630:CDS
AAACATAGGAAAAGACAAAT+GGG 0.507327 8_4:+8505846 Msa1311630:CDS
GGCTTTCATAAAGCTCCAAT+GGG 0.507465 8_4:-8506341 None:intergenic
ATACACGCGCATAACCCAAA+AGG 0.512691 8_4:-8506490 None:intergenic
CTTTGGCTAGGTTGATTCAA+GGG 0.515978 8_4:+8506214 Msa1311630:CDS
CACAAATCATGGGAGGTGGT+GGG 0.518525 8_4:-8506615 None:intergenic
TAACCTATGGAAATTGCAAA+GGG 0.520685 8_4:+8506026 Msa1311630:CDS
TTAACCTATGGAAATTGCAA+AGG 0.523137 8_4:+8506025 Msa1311630:CDS
AGGCTTTCATAAAGCTCCAA+TGG 0.524060 8_4:-8506342 None:intergenic
ATTATCGGGACAATAGTTCT+CGG 0.524735 8_4:-8506551 None:intergenic
TATAATTTCTAGCATTCATG+TGG 0.527236 8_4:-8506757 None:intergenic
TTTGATATAAACACAAAAGA+AGG 0.528739 8_4:+8506237 Msa1311630:CDS
CACTGAGTAAATATTCTCTC+GGG 0.531748 8_4:-8506576 None:intergenic
GTAGCAGCAGGGAGATACTT+AGG 0.534053 8_4:+8503814 Msa1311630:CDS
ATTCCTGTTAAGGGTGCTGG+TGG 0.537448 8_4:-8505937 None:intergenic
CATGTGCTGGTACAACGTTT+GGG 0.537606 8_4:+8506172 Msa1311630:CDS
TAGATTTGTCAATGTCGTGT+CGG 0.538462 8_4:-8506829 None:intergenic
TGGACCATATTTCTCAGCCA+TGG 0.538576 8_4:-8503683 None:intergenic
AGTAGGATTGGCATTGCCTA+AGG 0.538954 8_4:+8506284 Msa1311630:CDS
ACACTTGATACAAATATCAA+AGG 0.539549 8_4:-8506362 None:intergenic
TGGAGACTTCTTGGGTTGAG+AGG 0.542841 8_4:-8503441 None:intergenic
GCCACGTTGGTTTCATGAAG+AGG 0.545120 8_4:+8504229 Msa1311630:CDS
CCAAGCCTAAGGGAGAAGAT+TGG 0.545200 8_4:-8503703 None:intergenic
TGTTGCATTTGACTTTGGCT+AGG 0.545521 8_4:+8506202 Msa1311630:CDS
GCTGCAACCACGTCTCCCAT+TGG 0.546447 8_4:+8506326 Msa1311630:CDS
TGCTGCTACATTAGGTCTTG+AGG 0.554406 8_4:-8503800 None:intergenic
TTATCGGGACAATAGTTCTC+GGG 0.555359 8_4:-8506550 None:intergenic
CAAGAATTGGACACAAACAT+AGG 0.556602 8_4:+8505832 Msa1311630:CDS
GGTCCAGTTGATATGATTGA+AGG 0.559872 8_4:+8506261 Msa1311630:CDS
AACCTTAGTGGTGAATAGTA+GGG 0.567602 8_4:+8503735 Msa1311630:CDS
CTCAACCCAAGAAGTCTCCA+TGG 0.569162 8_4:+8503444 Msa1311630:exon
TGATTGGAGGATGAGTTATC+GGG 0.569347 8_4:+8506652 Msa1311630:three_prime_UTR
TACACGCGCATAACCCAAAA+GGG 0.570932 8_4:-8506489 None:intergenic
GTACAGCAATAACATTAGGA+TGG 0.572625 8_4:+8505761 Msa1311630:CDS
GGTTGCAGCATAACTTCAAG+TGG 0.575115 8_4:-8506312 None:intergenic
ACACTGAGTAAATATTCTCT+CGG 0.576075 8_4:-8506577 None:intergenic
GTTGATATGATTGAAGGAGT+AGG 0.577757 8_4:+8506267 Msa1311630:CDS
TACAGCAATAACATTAGGAT+GGG 0.578014 8_4:+8505762 Msa1311630:CDS
AGATGAAGGTGGCCTATGAA+AGG 0.578822 8_4:-8503622 None:intergenic
TTTCATGAAGAGGACTGCTA+AGG 0.581298 8_4:+8504239 Msa1311630:CDS
TGCCCACAAATCATGGGAGG+TGG 0.581969 8_4:-8506619 None:intergenic
GCAGGCTACCATGTGATCAA+AGG 0.584972 8_4:+8505988 Msa1311630:CDS
TGTTATTGCTGTACTTCCTG+AGG 0.585057 8_4:-8505752 None:intergenic
TATGGAAGAAGGTCATGTGC+TGG 0.585786 8_4:+8506159 Msa1311630:CDS
CTAATGAATTTCAACCTGAG+AGG 0.587907 8_4:+8506070 Msa1311630:CDS
AAATCAAACCAACTTAGGCT+AGG 0.591051 8_4:-8504201 None:intergenic
ACCAAGAAGATAGTGAGGCA+TGG 0.593249 8_4:+8504112 Msa1311630:CDS
CCATTATCAAAGAGACACTT+CGG 0.593830 8_4:+8505908 Msa1311630:CDS
AAGAGAGATGAGGTACAAAG+TGG 0.597988 8_4:+8504306 Msa1311630:CDS
CCTACCTGCCCACAAATCAT+GGG 0.599193 8_4:-8506625 None:intergenic
TTGGTTGCAACCAAGCCTAA+GGG 0.599480 8_4:-8503713 None:intergenic
TTCCTGTTAAGGGTGCTGGT+GGG 0.603062 8_4:-8505936 None:intergenic
TGCCACGTGGCAATCATCAG+TGG 0.604616 8_4:-8505968 None:intergenic
AACGAGTGCCTTTGATCACA+TGG 0.605097 8_4:-8505996 None:intergenic
GAATAGTAGGGAAATTGCCA+AGG 0.607094 8_4:+8503747 Msa1311630:CDS
GCAGGTAGGAAATTGATTGG+AGG 0.612532 8_4:+8506639 Msa1311630:three_prime_UTR
AGAGAATATTTACTCAGTGT+CGG 0.616917 8_4:+8506580 Msa1311630:three_prime_UTR
AGTTATCAAAGCAACAACCT+TGG 0.619780 8_4:+8504410 Msa1311630:CDS
AATAAACCAAGAAGATAGTG+AGG 0.628813 8_4:+8504107 Msa1311630:CDS
AAAGATACTACATATCTATG+TGG 0.630395 8_4:+8504153 Msa1311630:CDS
CCTACTTATAAACCATCCAA+AGG 0.633459 8_4:+8505792 Msa1311630:CDS
ATGAAAGGTAAGGCACAACA+TGG 0.635212 8_4:-8503607 None:intergenic
AAGGTGGCCTATGAAAGGTA+AGG 0.638379 8_4:-8503617 None:intergenic
CCCATGATTTGTGGGCAGGT+AGG 0.639450 8_4:+8506625 Msa1311630:three_prime_UTR
TCGCCAATAATCTCCATAAG+GGG 0.640986 8_4:-8503863 None:intergenic
GATATAAACACAAAAGAAGG+TGG 0.646350 8_4:+8506240 Msa1311630:CDS
TAAAGCTCCAATGGGAGACG+TGG 0.653424 8_4:-8506333 None:intergenic
ACCTGCCCACAAATCATGGG+AGG 0.664022 8_4:-8506622 None:intergenic
TAGTGCTTAGAAGATGAAGG+TGG 0.670199 8_4:-8503633 None:intergenic
GATTTGTCAATGTCGTGTCG+GGG 0.674090 8_4:-8506827 None:intergenic
CAAGACCTAATGTAGCAGCA+GGG 0.713373 8_4:+8503803 Msa1311630:CDS
TCCTCTTCATGAAACCAACG+TGG 0.743480 8_4:-8504230 None:intergenic
TCACATGGTAGCCTGCCACG+TGG 0.746003 8_4:-8505981 None:intergenic
AGCCACTGATGATTGCCACG+TGG 0.771511 8_4:+8505966 Msa1311630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAATCTATTATTTGA+TGG + chr8_4:8504515-8504534 Msa1311630:intron 10.0%
!!! ATTCAAATATATTGATTTAA+TGG + chr8_4:8504795-8504814 Msa1311630:intron 10.0%
!!! ACAAATAAAAAATATTTTGA+TGG - chr8_4:8504904-8504923 None:intergenic 10.0%
!!! ATATTTTTTATTTGTTACTT+AGG + chr8_4:8504909-8504928 Msa1311630:intron 10.0%
!! AAAATAAGTATGATATTTAA+TGG - chr8_4:8504998-8505017 None:intergenic 10.0%
!! CATATATTTATTTAATTGAA+AGG - chr8_4:8505115-8505134 None:intergenic 10.0%
!!! TATCAAATATTCTAAATTTT+AGG + chr8_4:8505590-8505609 Msa1311630:intron 10.0%
!! AAAATAATCATATATATGAT+TGG + chr8_4:8506466-8506485 Msa1311630:three_prime_UTR 10.0%
!!! GTTTTTCATAATGTTAATAT+TGG + chr8_4:8503300-8503319 Msa1311630:five_prime_UTR 15.0%
!! ATTATTGAAAATGAATATGT+AGG - chr8_4:8503368-8503387 None:intergenic 15.0%
!! ACATTTGTAAAAAATTCAAA+TGG + chr8_4:8503991-8504010 Msa1311630:CDS 15.0%
!!! AAAAGTATGATATGAATATA+TGG - chr8_4:8504464-8504483 None:intergenic 15.0%
!!! AAATTTGATCTAATTCATTT+TGG - chr8_4:8504763-8504782 None:intergenic 15.0%
!! TAAATCAATATATTTGAATG+AGG - chr8_4:8504794-8504813 None:intergenic 15.0%
!!! ATGTAATTAGACTTTAAAAT+AGG + chr8_4:8505203-8505222 Msa1311630:intron 15.0%
!! AATTCTTTGTAAAATAATGA+TGG + chr8_4:8505270-8505289 Msa1311630:intron 15.0%
!!! ATTTAATTAAAGTCTTGTAT+TGG - chr8_4:8505534-8505553 None:intergenic 15.0%
!! AGAGAGAAAAAATTATATAT+TGG - chr8_4:8505693-8505712 None:intergenic 15.0%
!!! TTTTTGTGTGATAAAATATA+TGG + chr8_4:8506415-8506434 Msa1311630:three_prime_UTR 15.0%
!!! ATGTAATGTACTTTTTATTT+TGG + chr8_4:8506720-8506739 Msa1311630:three_prime_UTR 15.0%
!!! AAATAGATGTGAAGTATTTA+TGG + chr8_4:8503409-8503428 Msa1311630:five_prime_UTR 20.0%
!! TAAAATAGGCATATATATCT+TGG + chr8_4:8505217-8505236 Msa1311630:intron 20.0%
!! AGAATTACCACAAAATATTT+GGG - chr8_4:8505256-8505275 None:intergenic 20.0%
!! AAGAATTACCACAAAATATT+TGG - chr8_4:8505257-8505276 None:intergenic 20.0%
!!! CTTGACTATTTTATCTATAT+AGG - chr8_4:8505474-8505493 None:intergenic 20.0%
!! TTTGATATAAACACAAAAGA+AGG + chr8_4:8506237-8506256 Msa1311630:CDS 20.0%
! AAAATAAAAAGGAAGATCCA+TGG - chr8_4:8503464-8503483 None:intergenic 25.0%
! ATTGTTTGTTTACGTCTATT+AGG - chr8_4:8503556-8503575 None:intergenic 25.0%
!!! GTTGAAAAGGTTCTAAAATA+TGG - chr8_4:8503664-8503683 None:intergenic 25.0%
! ATAATTGTGAAGATGATAGT+TGG + chr8_4:8504063-8504082 Msa1311630:CDS 25.0%
! AAAGATACTACATATCTATG+TGG + chr8_4:8504153-8504172 Msa1311630:CDS 25.0%
! ACATTATAAAAAGAGAGATG+AGG + chr8_4:8504296-8504315 Msa1311630:CDS 25.0%
! TGGAGATTAAAAGTTCATTT+AGG - chr8_4:8504935-8504954 None:intergenic 25.0%
!! AATTTGTTCAACATGATCAT+TGG - chr8_4:8505023-8505042 None:intergenic 25.0%
! GAATTACCACAAAATATTTG+GGG - chr8_4:8505255-8505274 None:intergenic 25.0%
! GCACAATTACAAATGATAAA+AGG + chr8_4:8505300-8505319 Msa1311630:intron 25.0%
!!! TTTTCTATTTTTCTCTCTCA+AGG - chr8_4:8505361-8505380 None:intergenic 25.0%
! TTATTGGAGTATATAGTAGT+AGG - chr8_4:8505656-8505675 None:intergenic 25.0%
! AAACATAGGAAAAGACAAAT+GGG + chr8_4:8505846-8505865 Msa1311630:CDS 25.0%
!! TAATGGCTTGAAGATATTTT+AGG - chr8_4:8505894-8505913 None:intergenic 25.0%
!!! CATTGATAATTTTCAGAATC+AGG + chr8_4:8506113-8506132 Msa1311630:CDS 25.0%
! ACACTTGATACAAATATCAA+AGG - chr8_4:8506365-8506384 None:intergenic 25.0%
!!! TATAATTTCTAGCATTCATG+TGG - chr8_4:8506760-8506779 None:intergenic 25.0%
! ATACACTATGTAAGCATATT+TGG + chr8_4:8506782-8506801 Msa1311630:three_prime_UTR 25.0%
AATCATCAATAAGGCTAAGA+TGG - chr8_4:8503503-8503522 None:intergenic 30.0%
AAGTTGCACAATCATCAATA+AGG - chr8_4:8503512-8503531 None:intergenic 30.0%
!!! TTTTAGAACCTTTTCAACCA+TGG + chr8_4:8503666-8503685 Msa1311630:CDS 30.0%
!!! ATTTTTTGTGAGACATTCCT+TGG - chr8_4:8503767-8503786 None:intergenic 30.0%
! TTGAGCTTTTATCAAGTCAT+AGG + chr8_4:8503908-8503927 Msa1311630:CDS 30.0%
AATAAACCAAGAAGATAGTG+AGG + chr8_4:8504107-8504126 Msa1311630:CDS 30.0%
!! TCTATGTGGTGTTTTTGTTA+TGG + chr8_4:8504167-8504186 Msa1311630:CDS 30.0%
CTTGAAAATCAAACCAACTT+AGG - chr8_4:8504209-8504228 None:intergenic 30.0%
!!! CTAAGTTGGTTTGATTTTCA+AGG + chr8_4:8504207-8504226 Msa1311630:CDS 30.0%
TGGATTTCATTCTTGATAAG+TGG + chr8_4:8504265-8504284 Msa1311630:CDS 30.0%
TAAATGTGCAGATGATTTCA+TGG + chr8_4:8504329-8504348 Msa1311630:CDS 30.0%
GAAGAAGATGAAGAAATTTG+TGG + chr8_4:8504372-8504391 Msa1311630:CDS 30.0%
! AATTCAACATAGGGTGTTTA+CGG - chr8_4:8504850-8504869 None:intergenic 30.0%
AAAATCGTGAAACAGACATA+TGG - chr8_4:8504955-8504974 None:intergenic 30.0%
AAATAGTCAAGACCATACTT+TGG + chr8_4:8505483-8505502 Msa1311630:intron 30.0%
!!! TAGACTTGAGTTTTTAGAAC+AGG - chr8_4:8505560-8505579 None:intergenic 30.0%
!! GCTTTGAAAAAAGGCAAATT+AGG - chr8_4:8505617-8505636 None:intergenic 30.0%
CTACTATATACTCCAATAAG+TGG + chr8_4:8505657-8505676 Msa1311630:intron 30.0%
TACAGCAATAACATTAGGAT+GGG + chr8_4:8505762-8505781 Msa1311630:CDS 30.0%
CTTTGGATGGTTTATAAGTA+GGG - chr8_4:8505794-8505813 None:intergenic 30.0%
CAAACATAGGAAAAGACAAA+TGG + chr8_4:8505845-8505864 Msa1311630:CDS 30.0%
TTAACCTATGGAAATTGCAA+AGG + chr8_4:8506025-8506044 Msa1311630:CDS 30.0%
TAACCTATGGAAATTGCAAA+GGG + chr8_4:8506026-8506045 Msa1311630:CDS 30.0%
!! TCTCAGGTTGAAATTCATTA+GGG - chr8_4:8506071-8506090 None:intergenic 30.0%
TGAATATTGAAAAACCTCTC+AGG - chr8_4:8506087-8506106 None:intergenic 30.0%
! AATTTTCAGAATCAGGACTT+TGG + chr8_4:8506120-8506139 Msa1311630:CDS 30.0%
GATATAAACACAAAAGAAGG+TGG + chr8_4:8506240-8506259 Msa1311630:CDS 30.0%
!! ATATATATGATTGGCCCTTT+TGG + chr8_4:8506475-8506494 Msa1311630:three_prime_UTR 30.0%
!! TATATATGATTGGCCCTTTT+GGG + chr8_4:8506476-8506495 Msa1311630:three_prime_UTR 30.0%
ATATTCTCTCGGGATATTAT+CGG - chr8_4:8506569-8506588 None:intergenic 30.0%
ACACTGAGTAAATATTCTCT+CGG - chr8_4:8506580-8506599 None:intergenic 30.0%
AGAGAATATTTACTCAGTGT+CGG + chr8_4:8506580-8506599 Msa1311630:three_prime_UTR 30.0%
CTTTAGTGCTTAGAAGATGA+AGG - chr8_4:8503639-8503658 None:intergenic 35.0%
TACTATTCACCACTAAGGTT+TGG - chr8_4:8503735-8503754 None:intergenic 35.0%
AAACCTTAGTGGTGAATAGT+AGG + chr8_4:8503734-8503753 Msa1311630:CDS 35.0%
AACCTTAGTGGTGAATAGTA+GGG + chr8_4:8503735-8503754 Msa1311630:CDS 35.0%
TTCGCCAATAATCTCCATAA+GGG - chr8_4:8503867-8503886 None:intergenic 35.0%
TTTCGCCAATAATCTCCATA+AGG - chr8_4:8503868-8503887 None:intergenic 35.0%
! TGATCTAGAAACTTGCTCAT+AGG - chr8_4:8504030-8504049 None:intergenic 35.0%
ATAGTTGGCAAGAGATTTAG+TGG + chr8_4:8504078-8504097 Msa1311630:CDS 35.0%
AAATCAAACCAACTTAGGCT+AGG - chr8_4:8504204-8504223 None:intergenic 35.0%
AAGAAATTTGTGGCCACAAA+CGG + chr8_4:8504382-8504401 Msa1311630:CDS 35.0%
AGTTATCAAAGCAACAACCT+TGG + chr8_4:8504410-8504429 Msa1311630:CDS 35.0%
GCAGCTCAAAATTCAACATA+GGG - chr8_4:8504859-8504878 None:intergenic 35.0%
TGCAGCTCAAAATTCAACAT+AGG - chr8_4:8504860-8504879 None:intergenic 35.0%
! ATGTTGAATTTTGAGCTGCA+AGG + chr8_4:8504860-8504879 Msa1311630:intron 35.0%
! TCATAGCCCCAAATATTTTG+TGG + chr8_4:8505246-8505265 Msa1311630:intron 35.0%
AACGAGACACAAAGAAAATG+AGG + chr8_4:8505395-8505414 Msa1311630:intron 35.0%
! GAGGTGTTAAATGAGTATCA+AGG + chr8_4:8505414-8505433 Msa1311630:intron 35.0%
ATATATGGACGTCCAAAGTA+TGG - chr8_4:8505498-8505517 None:intergenic 35.0%
CGTCCATATATACATTTGCT+TGG + chr8_4:8505507-8505526 Msa1311630:intron 35.0%
GGACCAAGCAAATGTATATA+TGG - chr8_4:8505513-8505532 None:intergenic 35.0%
!! CACATGCAAGCTTTGAAAAA+AGG - chr8_4:8505626-8505645 None:intergenic 35.0%
! GGAAGTACAGCAATAACATT+AGG + chr8_4:8505757-8505776 Msa1311630:CDS 35.0%
GTACAGCAATAACATTAGGA+TGG + chr8_4:8505761-8505780 Msa1311630:CDS 35.0%
CCTTTGGATGGTTTATAAGT+AGG - chr8_4:8505795-8505814 None:intergenic 35.0%
CCTACTTATAAACCATCCAA+AGG + chr8_4:8505792-8505811 Msa1311630:CDS 35.0%
!!! CTTGTTTTAAGACCTTTGGA+TGG - chr8_4:8505807-8505826 None:intergenic 35.0%
!!! TGTGCTTGTTTTAAGACCTT+TGG - chr8_4:8505811-8505830 None:intergenic 35.0%
AAAACAAGCACAGCAAGAAT+TGG + chr8_4:8505819-8505838 Msa1311630:CDS 35.0%
CAAGAATTGGACACAAACAT+AGG + chr8_4:8505832-8505851 Msa1311630:CDS 35.0%
! GGTTTTTGATGTCACATTCT+TGG - chr8_4:8505873-8505892 None:intergenic 35.0%
CCATTATCAAAGAGACACTT+CGG + chr8_4:8505908-8505927 Msa1311630:CDS 35.0%
GCTTCTCTTATTCCTGTTAA+GGG - chr8_4:8505949-8505968 None:intergenic 35.0%
CTCGTTTGCTTATTAACCTA+TGG + chr8_4:8506013-8506032 Msa1311630:CDS 35.0%
!! CTCTCAGGTTGAAATTCATT+AGG - chr8_4:8506072-8506091 None:intergenic 35.0%
CTAATGAATTTCAACCTGAG+AGG + chr8_4:8506070-8506089 Msa1311630:CDS 35.0%
!! GGATATGTGCCATTTAGTTA+TGG + chr8_4:8506141-8506160 Msa1311630:CDS 35.0%
! TGCCATTTAGTTATGGAAGA+AGG + chr8_4:8506148-8506167 Msa1311630:CDS 35.0%
GACCTTCTTCCATAACTAAA+TGG - chr8_4:8506153-8506172 None:intergenic 35.0%
ACTCCTTCAATCATATCAAC+TGG - chr8_4:8506267-8506286 None:intergenic 35.0%
GTTGATATGATTGAAGGAGT+AGG + chr8_4:8506267-8506286 Msa1311630:CDS 35.0%
TATGATTGAAGGAGTAGGAT+TGG + chr8_4:8506272-8506291 Msa1311630:CDS 35.0%
!! ACTTCAAGTGGATTTTCCTT+AGG - chr8_4:8506303-8506322 None:intergenic 35.0%
ATTATCGGGACAATAGTTCT+CGG - chr8_4:8506554-8506573 None:intergenic 35.0%
TATTCTCTCGGGATATTATC+GGG - chr8_4:8506568-8506587 None:intergenic 35.0%
CACTGAGTAAATATTCTCTC+GGG - chr8_4:8506579-8506598 None:intergenic 35.0%
TTGATTGGAGGATGAGTTAT+CGG + chr8_4:8506651-8506670 Msa1311630:three_prime_UTR 35.0%
ATGAGTTATCGGGACAAATT+CGG + chr8_4:8506662-8506681 Msa1311630:three_prime_UTR 35.0%
TAGATTTGTCAATGTCGTGT+CGG - chr8_4:8506832-8506851 None:intergenic 35.0%
CATGCATGAAGTTCACGATA+TGG - chr8_4:8503336-8503355 None:intergenic 40.0%
AAGATCCATGGAGACTTCTT+GGG - chr8_4:8503452-8503471 None:intergenic 40.0%
!! ATGGTTCGGGTATTTTGTTG+TGG - chr8_4:8503591-8503610 None:intergenic 40.0%
ATGAAAGGTAAGGCACAACA+TGG - chr8_4:8503610-8503629 None:intergenic 40.0%
TGTTGTGCCTTACCTTTCAT+AGG + chr8_4:8503610-8503629 Msa1311630:CDS 40.0%
TAGTGCTTAGAAGATGAAGG+TGG - chr8_4:8503636-8503655 None:intergenic 40.0%
TTTCTCAGCCATGGTTGAAA+AGG - chr8_4:8503677-8503696 None:intergenic 40.0%
TCAACCATGGCTGAGAAATA+TGG + chr8_4:8503679-8503698 Msa1311630:CDS 40.0%
TTCCCTACTATTCACCACTA+AGG - chr8_4:8503740-8503759 None:intergenic 40.0%
GAATAGTAGGGAAATTGCCA+AGG + chr8_4:8503747-8503766 Msa1311630:CDS 40.0%
!!! ATTTTAGCTCTTGCCCCTTA+TGG + chr8_4:8503850-8503869 Msa1311630:CDS 40.0%
TTGCCCCTTATGGAGATTAT+TGG + chr8_4:8503860-8503879 Msa1311630:CDS 40.0%
TCGCCAATAATCTCCATAAG+GGG - chr8_4:8503866-8503885 None:intergenic 40.0%
ATAGTGAGGCATGGAGATTA+AGG + chr8_4:8504121-8504140 Msa1311630:CDS 40.0%
ATGCTATTCCTAGCCTAAGT+TGG + chr8_4:8504193-8504212 Msa1311630:CDS 40.0%
!! TTTGATTTTCAAGGCCACGT+TGG + chr8_4:8504216-8504235 Msa1311630:CDS 40.0%
TTTCATGAAGAGGACTGCTA+AGG + chr8_4:8504239-8504258 Msa1311630:CDS 40.0%
AAGAGAGATGAGGTACAAAG+TGG + chr8_4:8504306-8504325 Msa1311630:CDS 40.0%
AGAAATTTGTGGCCACAAAC+GGG + chr8_4:8504383-8504402 Msa1311630:CDS 40.0%
TTTCCTTCATGCTTAGCAAC+AGG + chr8_4:8504438-8504457 Msa1311630:intron 40.0%
CTCTCTCAAGGTGTATATGA+GGG - chr8_4:8505349-8505368 None:intergenic 40.0%
TCTCTCTCAAGGTGTATATG+AGG - chr8_4:8505350-8505369 None:intergenic 40.0%
GGTCTTCATGTACCACTTAT+TGG - chr8_4:8505672-8505691 None:intergenic 40.0%
ATTCTTATCCTTACAGCCTC+AGG + chr8_4:8505736-8505755 Msa1311630:CDS 40.0%
TGTTATTGCTGTACTTCCTG+AGG - chr8_4:8505755-8505774 None:intergenic 40.0%
! CCGAAGTGTCTCTTTGATAA+TGG - chr8_4:8505911-8505930 None:intergenic 40.0%
GGCTTCTCTTATTCCTGTTA+AGG - chr8_4:8505950-8505969 None:intergenic 40.0%
TAGGGTTTGACCATACTTGT+GGG - chr8_4:8506053-8506072 None:intergenic 40.0%
TTAGGGTTTGACCATACTTG+TGG - chr8_4:8506054-8506073 None:intergenic 40.0%
! GCAAGTGTTGCATTTGACTT+TGG + chr8_4:8506197-8506216 Msa1311630:CDS 40.0%
! TGTTGCATTTGACTTTGGCT+AGG + chr8_4:8506202-8506221 Msa1311630:CDS 40.0%
!! ACTTTGGCTAGGTTGATTCA+AGG + chr8_4:8506213-8506232 Msa1311630:CDS 40.0%
!! CTTTGGCTAGGTTGATTCAA+GGG + chr8_4:8506214-8506233 Msa1311630:CDS 40.0%
! GGTCCAGTTGATATGATTGA+AGG + chr8_4:8506261-8506280 Msa1311630:CDS 40.0%
GGCTTTCATAAAGCTCCAAT+GGG - chr8_4:8506344-8506363 None:intergenic 40.0%
AGGCTTTCATAAAGCTCCAA+TGG - chr8_4:8506345-8506364 None:intergenic 40.0%
TTATCGGGACAATAGTTCTC+GGG - chr8_4:8506553-8506572 None:intergenic 40.0%
TGATTGGAGGATGAGTTATC+GGG + chr8_4:8506652-8506671 Msa1311630:three_prime_UTR 40.0%
TGAGTTATCGGGACAAATTC+GGG + chr8_4:8506663-8506682 Msa1311630:three_prime_UTR 40.0%
TCTAGCATTCATGTGGATCA+AGG - chr8_4:8506753-8506772 None:intergenic 40.0%
AGATTTGTCAATGTCGTGTC+GGG - chr8_4:8506831-8506850 None:intergenic 40.0%
GAAGATCCATGGAGACTTCT+TGG - chr8_4:8503453-8503472 None:intergenic 45.0%
AGGTAAGGCACAACATGGTT+CGG - chr8_4:8503605-8503624 None:intergenic 45.0%
AAGGTGGCCTATGAAAGGTA+AGG - chr8_4:8503620-8503639 None:intergenic 45.0%
AGATGAAGGTGGCCTATGAA+AGG - chr8_4:8503625-8503644 None:intergenic 45.0%
TGGACCATATTTCTCAGCCA+TGG - chr8_4:8503686-8503705 None:intergenic 45.0%
ATGGTCCAATCTTCTCCCTT+AGG + chr8_4:8503698-8503717 Msa1311630:CDS 45.0%
TTGGTTGCAACCAAGCCTAA+GGG - chr8_4:8503716-8503735 None:intergenic 45.0%
TTTGGTTGCAACCAAGCCTA+AGG - chr8_4:8503717-8503736 None:intergenic 45.0%
TGGTTGCAACCAAACCTTAG+TGG + chr8_4:8503723-8503742 Msa1311630:CDS 45.0%
TGCTGCTACATTAGGTCTTG+AGG - chr8_4:8503803-8503822 None:intergenic 45.0%
TCAAGACCTAATGTAGCAGC+AGG + chr8_4:8503802-8503821 Msa1311630:CDS 45.0%
CAAGACCTAATGTAGCAGCA+GGG + chr8_4:8503803-8503822 Msa1311630:CDS 45.0%
TATCTCCCTGCTGCTACATT+AGG - chr8_4:8503811-8503830 None:intergenic 45.0%
ACCAAGAAGATAGTGAGGCA+TGG + chr8_4:8504112-8504131 Msa1311630:CDS 45.0%
TCCATGCCTCACTATCTTCT+TGG - chr8_4:8504116-8504135 None:intergenic 45.0%
TCCTCTTCATGAAACCAACG+TGG - chr8_4:8504233-8504252 None:intergenic 45.0%
GAAGAGGACTGCTAAGGAAA+TGG + chr8_4:8504245-8504264 Msa1311630:CDS 45.0%
TGATAACTGTCTCCCGTTTG+TGG - chr8_4:8504398-8504417 None:intergenic 45.0%
GCATGAAGGAAAACGTACCA+AGG - chr8_4:8504430-8504449 None:intergenic 45.0%
! CAACATAGGGTGTTTACGGT+CGG - chr8_4:8504846-8504865 None:intergenic 45.0%
! CAAGGTGTATATGAGGGCAT+GGG - chr8_4:8505343-8505362 None:intergenic 45.0%
TCAAGGTGTATATGAGGGCA+TGG - chr8_4:8505344-8505363 None:intergenic 45.0%
! CTTATTCCTGTTAAGGGTGC+TGG - chr8_4:8505943-8505962 None:intergenic 45.0%
AACGAGTGCCTTTGATCACA+TGG - chr8_4:8505999-8506018 None:intergenic 45.0%
GGTCCCTTTGCAATTTCCAT+AGG - chr8_4:8506032-8506051 None:intergenic 45.0%
TATGGAAGAAGGTCATGTGC+TGG + chr8_4:8506159-8506178 Msa1311630:CDS 45.0%
! TCATGTGCTGGTACAACGTT+TGG + chr8_4:8506171-8506190 Msa1311630:CDS 45.0%
! CATGTGCTGGTACAACGTTT+GGG + chr8_4:8506172-8506191 Msa1311630:CDS 45.0%
! AGTAGGATTGGCATTGCCTA+AGG + chr8_4:8506284-8506303 Msa1311630:CDS 45.0%
GGTTGCAGCATAACTTCAAG+TGG - chr8_4:8506315-8506334 None:intergenic 45.0%
TACACGCGCATAACCCAAAA+GGG - chr8_4:8506492-8506511 None:intergenic 45.0%
ATACACGCGCATAACCCAAA+AGG - chr8_4:8506493-8506512 None:intergenic 45.0%
TGGGCAGGTAGGAAATTGAT+TGG + chr8_4:8506636-8506655 Msa1311630:three_prime_UTR 45.0%
GCAGGTAGGAAATTGATTGG+AGG + chr8_4:8506639-8506658 Msa1311630:three_prime_UTR 45.0%
GATTTGTCAATGTCGTGTCG+GGG - chr8_4:8506830-8506849 None:intergenic 45.0%
!! ATAATAATTTGAAAATAAAA+AGG - chr8_4:8503475-8503494 None:intergenic 5.0%
!! TGGAGACTTCTTGGGTTGAG+AGG - chr8_4:8503444-8503463 None:intergenic 50.0%
CTCAACCCAAGAAGTCTCCA+TGG + chr8_4:8503444-8503463 Msa1311630:exon 50.0%
GGTAAGGCACAACATGGTTC+GGG - chr8_4:8503604-8503623 None:intergenic 50.0%
CCAAGCCTAAGGGAGAAGAT+TGG - chr8_4:8503706-8503725 None:intergenic 50.0%
CCAATCTTCTCCCTTAGGCT+TGG + chr8_4:8503703-8503722 Msa1311630:CDS 50.0%
GTAGCAGCAGGGAGATACTT+AGG + chr8_4:8503814-8503833 Msa1311630:CDS 50.0%
!! GCCACGTTGGTTTCATGAAG+AGG + chr8_4:8504229-8504248 Msa1311630:CDS 50.0%
TGGCCTGTTGCTAAGCATGA+AGG - chr8_4:8504444-8504463 None:intergenic 50.0%
CTGTACTTCCTGAGGCTGTA+AGG - chr8_4:8505747-8505766 None:intergenic 50.0%
!! TTCCTGTTAAGGGTGCTGGT+GGG - chr8_4:8505939-8505958 None:intergenic 50.0%
!! ATTCCTGTTAAGGGTGCTGG+TGG - chr8_4:8505940-8505959 None:intergenic 50.0%
GCAGGCTACCATGTGATCAA+AGG + chr8_4:8505988-8506007 Msa1311630:CDS 50.0%
TGCAAAGGGACCCACAAGTA+TGG + chr8_4:8506040-8506059 Msa1311630:CDS 50.0%
TAAAGCTCCAATGGGAGACG+TGG - chr8_4:8506336-8506355 None:intergenic 50.0%
!!! GAGGTGGTGGGGCTTAATTT+TGG - chr8_4:8506606-8506625 None:intergenic 50.0%
ACAAATCATGGGAGGTGGTG+GGG - chr8_4:8506617-8506636 None:intergenic 50.0%
CACAAATCATGGGAGGTGGT+GGG - chr8_4:8506618-8506637 None:intergenic 50.0%
! CACCACCTCCCATGATTTGT+GGG + chr8_4:8506617-8506636 Msa1311630:three_prime_UTR 50.0%
CCTACCTGCCCACAAATCAT+GGG - chr8_4:8506628-8506647 None:intergenic 50.0%
TCCTACCTGCCCACAAATCA+TGG - chr8_4:8506629-8506648 None:intergenic 50.0%
TACCCACCAGCACCCTTAAC+AGG + chr8_4:8505934-8505953 Msa1311630:CDS 55.0%
AGCCACTGATGATTGCCACG+TGG + chr8_4:8505966-8505985 Msa1311630:CDS 55.0%
TGCCACGTGGCAATCATCAG+TGG - chr8_4:8505971-8505990 None:intergenic 55.0%
ACTGATGATTGCCACGTGGC+AGG + chr8_4:8505970-8505989 Msa1311630:CDS 55.0%
CCACAAATCATGGGAGGTGG+TGG - chr8_4:8506619-8506638 None:intergenic 55.0%
CCACCACCTCCCATGATTTG+TGG + chr8_4:8506616-8506635 Msa1311630:three_prime_UTR 55.0%
TGCCCACAAATCATGGGAGG+TGG - chr8_4:8506622-8506641 None:intergenic 55.0%
! ACCTCCCATGATTTGTGGGC+AGG + chr8_4:8506621-8506640 Msa1311630:three_prime_UTR 55.0%
ACCTGCCCACAAATCATGGG+AGG - chr8_4:8506625-8506644 None:intergenic 55.0%
! CCCATGATTTGTGGGCAGGT+AGG + chr8_4:8506625-8506644 Msa1311630:three_prime_UTR 55.0%
TCACATGGTAGCCTGCCACG+TGG - chr8_4:8505984-8506003 None:intergenic 60.0%
GCTGCAACCACGTCTCCCAT+TGG + chr8_4:8506326-8506345 Msa1311630:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 8503263 8506867 8503263 ID=Msa1311630;Name=Msa1311630
chr8_4 mRNA 8503263 8506867 8503263 ID=Msa1311630-mRNA-1;Parent=Msa1311630;Name=Msa1311630-mRNA-1;_AED=0.24;_eAED=0.24;_QI=200|1|1|1|1|1|2|499|533
chr8_4 exon 8503263 8504431 8503263 ID=Msa1311630-mRNA-1:exon:3149;Parent=Msa1311630-mRNA-1
chr8_4 exon 8505736 8506867 8505736 ID=Msa1311630-mRNA-1:exon:3150;Parent=Msa1311630-mRNA-1
chr8_4 five_prime_UTR 8503263 8503462 8503263 ID=Msa1311630-mRNA-1:five_prime_utr;Parent=Msa1311630-mRNA-1
chr8_4 CDS 8503463 8504431 8503463 ID=Msa1311630-mRNA-1:cds;Parent=Msa1311630-mRNA-1
chr8_4 CDS 8505736 8506368 8505736 ID=Msa1311630-mRNA-1:cds;Parent=Msa1311630-mRNA-1
chr8_4 three_prime_UTR 8506369 8506867 8506369 ID=Msa1311630-mRNA-1:three_prime_utr;Parent=Msa1311630-mRNA-1
Gene Sequence

>Msa1311630

ATGGATCTTCCTTTTTATTTTCAAATTATTATTGCATCCATCTTAGCCTTATTGATGATTGTGCAACTTCAATTTAGATCTATTAGATCACCTAATAGACGTAAACAAACAATATTCAGCATAAACCACAACAAAATACCCGAACCATGTTGTGCCTTACCTTTCATAGGCCACCTTCATCTTCTAAGCACTAAAGAGCCATATTTTAGAACCTTTTCAACCATGGCTGAGAAATATGGTCCAATCTTCTCCCTTAGGCTTGGTTGCAACCAAACCTTAGTGGTGAATAGTAGGGAAATTGCCAAGGAATGTCTCACAAAAAATGACAAAGTTTTTGCCTCAAGACCTAATGTAGCAGCAGGGAGATACTTAGGTTACAACAATGCTATTTTAGCTCTTGCCCCTTATGGAGATTATTGGCGAAACATGAGAAAAATTTCAACTCTTGAGCTTTTATCAAGTCATAGGCTTGAAAAGCTAAAGCATGTTAGAGATTTTGAGATATACTCTCTAGTCAAAAATTTGTACACATTTGTAAAAAATTCAAATGGTTCAATTGAAGTACCTATGAGCAAGTTTCTAGATCATATGACATTTAATATAATTGTGAAGATGATAGTTGGCAAGAGATTTAGTGGTGAAACAATAAACCAAGAAGATAGTGAGGCATGGAGATTAAGGAATGCAATTAAAGATACTACATATCTATGTGGTGTTTTTGTTATGGCTGATGCTATTCCTAGCCTAAGTTGGTTTGATTTTCAAGGCCACGTTGGTTTCATGAAGAGGACTGCTAAGGAAATGGATTTCATTCTTGATAAGTGGTTGTGTGAACATTATAAAAAGAGAGATGAGGTACAAAGTGGTAAATGTGCAGATGATTTCATGGATGTATTGATATCAATGTTTGAAGAAGATGAAGAAATTTGTGGCCACAAACGGGAGACAGTTATCAAAGCAACAACCTTGATTCTTATCCTTACAGCCTCAGGAAGTACAGCAATAACATTAGGATGGGCTCTTTCCCTACTTATAAACCATCCAAAGGTCTTAAAACAAGCACAGCAAGAATTGGACACAAACATAGGAAAAGACAAATGGGTCCAAGAATGTGACATCAAAAACCTAAAATATCTTCAAGCCATTATCAAAGAGACACTTCGGTTATACCCACCAGCACCCTTAACAGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAGGCTACCATGTGATCAAAGGCACTCGTTTGCTTATTAACCTATGGAAATTGCAAAGGGACCCACAAGTATGGTCAAACCCTAATGAATTTCAACCTGAGAGGTTTTTCAATATTCATGATCACATTGATAATTTTCAGAATCAGGACTTTGGATATGTGCCATTTAGTTATGGAAGAAGGTCATGTGCTGGTACAACGTTTGGGTTGCAAGTGTTGCATTTGACTTTGGCTAGGTTGATTCAAGGGTTTGATATAAACACAAAAGAAGGTGGTCCAGTTGATATGATTGAAGGAGTAGGATTGGCATTGCCTAAGGAAAATCCACTTGAAGTTATGCTGCAACCACGTCTCCCATTGGAGCTTTATGAAAGCCTTTGA
Protein sequence

>Msa1311630

MDLPFYFQIIIASILALLMIVQLQFRSIRSPNRRKQTIFSINHNKIPEPCCALPFIGHLHLLSTKEPYFRTFSTMAEKYGPIFSLRLGCNQTLVVNSREIAKECLTKNDKVFASRPNVAAGRYLGYNNAILALAPYGDYWRNMRKISTLELLSSHRLEKLKHVRDFEIYSLVKNLYTFVKNSNGSIEVPMSKFLDHMTFNIIVKMIVGKRFSGETINQEDSEAWRLRNAIKDTTYLCGVFVMADAIPSLSWFDFQGHVGFMKRTAKEMDFILDKWLCEHYKKRDEVQSGKCADDFMDVLISMFEEDEEICGHKRETVIKATTLILILTASGSTAITLGWALSLLINHPKVLKQAQQELDTNIGKDKWVQECDIKNLKYLQAIIKETLRLYPPAPLTGIREATDDCHVAGYHVIKGTRLLINLWKLQRDPQVWSNPNEFQPERFFNIHDHIDNFQNQDFGYVPFSYGRRSCAGTTFGLQVLHLTLARLIQGFDINTKEGGPVDMIEGVGLALPKENPLEVMLQPRLPLELYESL*