Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274080 | XP_013444186.1 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 3.45e-154 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274080 | sp|Q9XI47|SHH1_ARATH | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.04e-51 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274080 | A0A072TMY2 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 1.65e-154 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1231560 | Msa1274080 | 0.808954 | 2.402807e-50 | -8.615850e-47 |
| Msa1274080 | Msa1274260 | 0.935676 | 5.827231e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274080 | MtrunA17_Chr8g0340501 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 3.17e-158 | 439 |
| Msa1274080 | MtrunA17_Chr3g0140441 | 41.791 | 201 | 96 | 2 | 4 | 203 | 50 | 230 | 2.41e-47 | 156 |
| Msa1274080 | MtrunA17_Chr8g0360221 | 42.786 | 201 | 104 | 2 | 14 | 203 | 58 | 258 | 3.46e-46 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274080 | AT1G15215.2 | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.07e-52 | 170 |
| Msa1274080 | AT1G15215.3 | 46.154 | 195 | 94 | 3 | 14 | 197 | 58 | 252 | 1.83e-49 | 162 |
| Msa1274080 | AT1G15215.4 | 47.541 | 183 | 87 | 2 | 18 | 191 | 62 | 244 | 6.60e-49 | 161 |
| Msa1274080 | AT3G18380.1 | 42.791 | 215 | 98 | 4 | 14 | 203 | 58 | 272 | 3.33e-46 | 157 |
| Msa1274080 | AT3G18380.3 | 42.254 | 213 | 100 | 4 | 14 | 203 | 58 | 270 | 2.86e-45 | 154 |
| Msa1274080 | AT3G18380.2 | 42.593 | 216 | 98 | 5 | 14 | 203 | 58 | 273 | 3.68e-45 | 154 |
| Msa1274080 | AT1G15215.1 | 41.053 | 95 | 47 | 2 | 18 | 103 | 62 | 156 | 3.34e-11 | 60.1 |
Find 76 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTCTGTATGTTTATTT+TGG | 0.149207 | 8_3:+7877833 | None:intergenic |
| AACCTAGTTGTTGATCTTTC+AGG | 0.153320 | 8_3:-7877778 | Msa1274080:CDS |
| AGGCAAATCTTCTTCGATAA+AGG | 0.253676 | 8_3:-7877758 | Msa1274080:CDS |
| GAATGGATTAATGTGAAATA+TGG | 0.288200 | 8_3:-7874044 | Msa1274080:CDS |
| CGCTATCATGTTCCCTCCTC+TGG | 0.309106 | 8_3:+7873562 | None:intergenic |
| GGCAAATCTTCTTCGATAAA+GGG | 0.336483 | 8_3:-7877757 | Msa1274080:CDS |
| ACCTCAGATTCTTCTTGTGT+TGG | 0.381816 | 8_3:+7873324 | None:intergenic |
| GTGAATCGTGCTGCTTGCTT+TGG | 0.392220 | 8_3:+7878849 | None:intergenic |
| CTATTGAGTAAAGATCTTCT+TGG | 0.392507 | 8_3:+7873079 | None:intergenic |
| CATCCCCACAAGTTCGCTAT+GGG | 0.406353 | 8_3:+7873273 | None:intergenic |
| CAAGTTCGCTATGGGGTTCA+TGG | 0.408654 | 8_3:+7873281 | None:intergenic |
| CACTTTGCTTTATCACCTGA+GGG | 0.424676 | 8_3:-7877805 | Msa1274080:CDS |
| AATGGATTAATGTGAAATAT+GGG | 0.432813 | 8_3:-7874043 | Msa1274080:CDS |
| CATGGTAGGTTCTAATTCAA+AGG | 0.438209 | 8_3:+7873299 | None:intergenic |
| GAACTCAACTGCTCGGAAAT+CGG | 0.438641 | 8_3:-7878914 | Msa1274080:five_prime_UTR |
| TGACTTGATTCAAATTAGTC+AGG | 0.450579 | 8_3:+7873148 | None:intergenic |
| ATAAGTATAGTCGTGATTGT+AGG | 0.455631 | 8_3:-7873022 | Msa1274080:three_prime_UTR |
| AATAAAATTACAAAGTTAAG+TGG | 0.456885 | 8_3:-7878942 | Msa1274080:five_prime_UTR |
| ATACAATAGCATCACAATAG+AGG | 0.459718 | 8_3:+7873592 | None:intergenic |
| TCATCCCCACAAGTTCGCTA+TGG | 0.466754 | 8_3:+7873272 | None:intergenic |
| ATGGTAGGTTCTAATTCAAA+GGG | 0.467786 | 8_3:+7873300 | None:intergenic |
| GACACTCTGAAGCTTCCAAC+GGG | 0.471475 | 8_3:+7874003 | None:intergenic |
| CTTGCTTTGGCATGCAATCG+CGG | 0.473854 | 8_3:+7878862 | None:intergenic |
| GAAGTTCGTGTACGATATCA+TGG | 0.474345 | 8_3:-7874086 | Msa1274080:CDS |
| GTTGGGACAGTTTGTGCTGT+AGG | 0.490372 | 8_3:-7873347 | Msa1274080:CDS |
| AACTGCTCGGAAATCGGCGG+TGG | 0.490944 | 8_3:-7878908 | Msa1274080:five_prime_UTR |
| CAGACTTGTCATGGTAAAAC+CGG | 0.492608 | 8_3:+7873514 | None:intergenic |
| ACAACTAGGTTCAGCCCCTC+AGG | 0.495898 | 8_3:+7877790 | None:intergenic |
| ACCTCGTCTAAAGAGAGCTT+AGG | 0.500697 | 8_3:+7878756 | None:intergenic |
| TTGGCAGGAAGAAGTTCGTT+GGG | 0.502315 | 8_3:-7873364 | Msa1274080:intron |
| GTAGCTGCATCTTCACTGTC+CGG | 0.504908 | 8_3:-7873533 | Msa1274080:CDS |
| CGTGTACGATATCATGGATT+CGG | 0.506096 | 8_3:-7874080 | Msa1274080:CDS |
| AAATAAACATACAGAGTCAA+AGG | 0.511141 | 8_3:-7877830 | Msa1274080:CDS |
| AACTACAGAGTTCTATGCAC+AGG | 0.512186 | 8_3:-7875389 | Msa1274080:CDS |
| GGCATGCAATCGCGGAATTG+CGG | 0.515020 | 8_3:+7878870 | None:intergenic |
| TCACTTTGCTTTATCACCTG+AGG | 0.516843 | 8_3:-7877806 | Msa1274080:CDS |
| TTGGGTTTCAGGTGCAGCAG+TGG | 0.521043 | 8_3:-7877858 | Msa1274080:intron |
| TCGGTAAGGATGAAGATGAA+TGG | 0.521822 | 8_3:-7874061 | Msa1274080:CDS |
| CAAGAAATACAGTTCCCTAA+AGG | 0.523819 | 8_3:+7873211 | None:intergenic |
| AAAAGCTCTCCAAAACCAAA+AGG | 0.532507 | 8_3:-7877730 | Msa1274080:intron |
| TTTGGCAGGAAGAAGTTCGT+TGG | 0.535920 | 8_3:-7873365 | Msa1274080:intron |
| TTCGCTATGGGGTTCATGGT+AGG | 0.542458 | 8_3:+7873285 | None:intergenic |
| CTCTGAAGCTTCCAACGGGA+TGG | 0.544158 | 8_3:+7874007 | None:intergenic |
| GAACCCCATAGCGAACTTGT+GGG | 0.545514 | 8_3:-7873277 | Msa1274080:CDS |
| TTCAGAGTGTCACAAGGTGA+AGG | 0.548383 | 8_3:-7873991 | Msa1274080:CDS |
| AGTCATGTGTATCCGTTGCA+AGG | 0.553166 | 8_3:-7873130 | Msa1274080:three_prime_UTR |
| TATCTATAAAAGACAATGCA+TGG | 0.556904 | 8_3:-7875747 | Msa1274080:intron |
| AATAAACATACAGAGTCAAA+GGG | 0.557520 | 8_3:-7877829 | Msa1274080:CDS |
| TACAATAGCATCACAATAGA+GGG | 0.559629 | 8_3:+7873593 | None:intergenic |
| TGAACCCCATAGCGAACTTG+TGG | 0.569394 | 8_3:-7873278 | Msa1274080:CDS |
| GGCAACTGAACTCAACTGCT+CGG | 0.573992 | 8_3:-7878921 | Msa1274080:five_prime_UTR |
| TCAAAATCTTCTTATTCACA+TGG | 0.579129 | 8_3:+7873181 | None:intergenic |
| AGATCACCTCAGACTTGTCA+TGG | 0.581330 | 8_3:+7873505 | None:intergenic |
| CGTTGCAAGGGATCTCTATG+AGG | 0.581631 | 8_3:-7873117 | Msa1274080:three_prime_UTR |
| ACGATATCATGGATTCGGTA+AGG | 0.582236 | 8_3:-7874075 | Msa1274080:CDS |
| GTCAGAATTAGCATTTGAAG+CGG | 0.595947 | 8_3:-7875770 | Msa1274080:CDS |
| TGACACTCTGAAGCTTCCAA+CGG | 0.596601 | 8_3:+7874002 | None:intergenic |
| GTCATGTGTATCCGTTGCAA+GGG | 0.599986 | 8_3:-7873129 | Msa1274080:three_prime_UTR |
| TCCTAAGCTCTCTTTAGACG+AGG | 0.605342 | 8_3:-7878757 | Msa1274080:intron |
| TGTATTGAAAATCCAGAGGA+GGG | 0.612784 | 8_3:-7873574 | Msa1274080:CDS |
| GAGTGTCACAAGGTGAAGGA+AGG | 0.613478 | 8_3:-7873987 | Msa1274080:CDS |
| TTGTATTGAAAATCCAGAGG+AGG | 0.615133 | 8_3:-7873575 | Msa1274080:CDS |
| TGCCTGAAAGATCAACAACT+AGG | 0.616326 | 8_3:+7877776 | None:intergenic |
| GCGACAGAGATCCATCCCGT+TGG | 0.618217 | 8_3:-7874018 | Msa1274080:CDS |
| ATCCCCACAAGTTCGCTATG+GGG | 0.619916 | 8_3:+7873274 | None:intergenic |
| CTCATAGAGATCCCTTGCAA+CGG | 0.623038 | 8_3:+7873118 | None:intergenic |
| ACTACAGAGTTCTATGCACA+GGG | 0.642918 | 8_3:-7875388 | Msa1274080:CDS |
| GCCAACACAAGAAGAATCTG+AGG | 0.648905 | 8_3:-7873325 | Msa1274080:CDS |
| ACTTTGCTTTATCACCTGAG+GGG | 0.653399 | 8_3:-7877804 | Msa1274080:CDS |
| CTCAACTGCTCGGAAATCGG+CGG | 0.661784 | 8_3:-7878911 | Msa1274080:five_prime_UTR |
| AACCCCATAGCGAACTTGTG+GGG | 0.664375 | 8_3:-7873276 | Msa1274080:CDS |
| GGAAGCTTCAGAGTGTCACA+AGG | 0.669493 | 8_3:-7873997 | Msa1274080:CDS |
| ATGGATTAATGTGAAATATG+GGG | 0.705458 | 8_3:-7874042 | Msa1274080:CDS |
| TGGTAGGTTCTAATTCAAAG+GGG | 0.708779 | 8_3:+7873301 | None:intergenic |
| CTATTGTATTGAAAATCCAG+AGG | 0.723013 | 8_3:-7873578 | Msa1274080:CDS |
| CTACAGAGTTCTATGCACAG+GGG | 0.821056 | 8_3:-7875387 | Msa1274080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATCTTTTTTTTTAACA+AGG | + | chr8_3:7874930-7874949 | None:intergenic | 10.0% |
| !!! | ATATTATTATTATTTTCTTC+AGG | + | chr8_3:7875406-7875425 | None:intergenic | 10.0% |
| !! | TTTATGTAAGTAAAATAAAA+AGG | + | chr8_3:7878028-7878047 | None:intergenic | 10.0% |
| !! | AATAAAATTACAAAGTTAAG+TGG | - | chr8_3:7873011-7873030 | Msa1274080:three_prime_UTR | 15.0% |
| !! | AAAACAAAATAAATTCAAAC+CGG | + | chr8_3:7873791-7873810 | None:intergenic | 15.0% |
| !! | TTATCTTGATGTTTATATAT+CGG | + | chr8_3:7874902-7874921 | None:intergenic | 15.0% |
| !!! | ATATATATATTTGCTAACTT+AGG | - | chr8_3:7875231-7875250 | Msa1274080:intron | 15.0% |
| !!! | TATTATTGGTATTTCTTTTT+TGG | + | chr8_3:7875433-7875452 | None:intergenic | 15.0% |
| !!! | GAGATATTTTAATTATATTG+TGG | + | chr8_3:7875773-7875792 | None:intergenic | 15.0% |
| !! | TTGTATTATTGAATAAGAAA+AGG | + | chr8_3:7876058-7876077 | None:intergenic | 15.0% |
| !! | ACAAATAATGATGAAACAAA+GGG | + | chr8_3:7873299-7873318 | None:intergenic | 20.0% |
| !! | TACAAATAATGATGAAACAA+AGG | + | chr8_3:7873300-7873319 | None:intergenic | 20.0% |
| !! | AAAGAATTTACAATGATGTT+GGG | - | chr8_3:7873334-7873353 | Msa1274080:CDS | 20.0% |
| !!! | TTAGGTGAATTCAATTTTTT+CGG | - | chr8_3:7873403-7873422 | Msa1274080:intron | 20.0% |
| !!! | ATAAGTTTGTTTCATAATTC+CGG | + | chr8_3:7873755-7873774 | None:intergenic | 20.0% |
| !! | ACTTATAGATTATACAAAAC+CGG | - | chr8_3:7873769-7873788 | Msa1274080:intron | 20.0% |
| !! | AAATAATAAACGTAACACAA+AGG | + | chr8_3:7873901-7873920 | None:intergenic | 20.0% |
| !!! | TTTATTTTGTTGTCATTACT+AGG | - | chr8_3:7874357-7874376 | Msa1274080:intron | 20.0% |
| !!! | TATTTTCTTGAAATTGAAGT+TGG | + | chr8_3:7874761-7874780 | None:intergenic | 20.0% |
| !!! | TTTTAAATGTTCCAAATCTT+TGG | - | chr8_3:7874781-7874800 | Msa1274080:intron | 20.0% |
| !!! | CACAATATTTCTTTTATACA+CGG | - | chr8_3:7875174-7875193 | Msa1274080:intron | 20.0% |
| !! | ACAACTGTGATAATTATTAT+TGG | + | chr8_3:7875447-7875466 | None:intergenic | 20.0% |
| !! | TGATTATCATTTATTAAGTC+TGG | + | chr8_3:7875528-7875547 | None:intergenic | 20.0% |
| !! | AAATATCTCATCATAATGTT+AGG | - | chr8_3:7875784-7875803 | Msa1274080:CDS | 20.0% |
| !!! | TGTGACATTTTTAAACATTT+TGG | - | chr8_3:7876288-7876307 | Msa1274080:intron | 20.0% |
| !! | ACTAAATAACTAACCAAAAA+AGG | + | chr8_3:7876480-7876499 | None:intergenic | 20.0% |
| !!! | GAAAATAAAAAAGCATCAAA+AGG | + | chr8_3:7876513-7876532 | None:intergenic | 20.0% |
| !!! | CTTTTTTATTTTCCAATTAC+AGG | - | chr8_3:7876520-7876539 | Msa1274080:intron | 20.0% |
| !!! | GTAAGATTCTTTTATATCTT+TGG | - | chr8_3:7876594-7876613 | Msa1274080:intron | 20.0% |
| !! | TATTTGAAGAAAAATAAGGA+AGG | + | chr8_3:7876694-7876713 | None:intergenic | 20.0% |
| !! | AAAGAATCAAATACAAAAAC+AGG | + | chr8_3:7876717-7876736 | None:intergenic | 20.0% |
| !! | TAGTTTCTATTGCTTAAAAA+AGG | + | chr8_3:7876880-7876899 | None:intergenic | 20.0% |
| !! | CAAATTGTACTATGTAAAAA+TGG | - | chr8_3:7877063-7877082 | Msa1274080:intron | 20.0% |
| !! | TCTTATACATAGTACTATTT+GGG | + | chr8_3:7877170-7877189 | None:intergenic | 20.0% |
| !!! | TATATGGATTTCTAATGTTT+TGG | + | chr8_3:7877219-7877238 | None:intergenic | 20.0% |
| !! | GTGGAAATGAAAATAAAAAT+CGG | - | chr8_3:7877527-7877546 | Msa1274080:intron | 20.0% |
| !!! | TTAAAAATCATTTTGGAACA+GGG | + | chr8_3:7877616-7877635 | None:intergenic | 20.0% |
| !!! | ATTAAAAATCATTTTGGAAC+AGG | + | chr8_3:7877617-7877636 | None:intergenic | 20.0% |
| !!! | CATGGTATTAAAAATCATTT+TGG | + | chr8_3:7877623-7877642 | None:intergenic | 20.0% |
| !!! | AAGTTTCCATTATTTTTCAA+TGG | + | chr8_3:7877687-7877706 | None:intergenic | 20.0% |
| !! | GTTCATAAGTATACAAATAT+AGG | + | chr8_3:7877734-7877753 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGGTATATTAT+GGG | - | chr8_3:7877797-7877816 | Msa1274080:CDS | 20.0% |
| !!! | AATGGATTAATGTGAAATAT+GGG | - | chr8_3:7877910-7877929 | Msa1274080:intron | 20.0% |
| !! | AAGAAAAAAAAACTACGTTT+GGG | + | chr8_3:7878253-7878272 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAACTACGTT+TGG | + | chr8_3:7878254-7878273 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTCACAAGATAC+TGG | - | chr8_3:7878959-7878978 | Msa1274080:five_prime_UTR | 20.0% |
| ! | AAGAAACAGAAGATTGAAAA+AGG | + | chr8_3:7873242-7873261 | None:intergenic | 25.0% |
| ! | TCATCATTATTTGTAGATAC+TGG | - | chr8_3:7873305-7873324 | Msa1274080:CDS | 25.0% |
| ! | TTATTTGTAGATACTGGAAT+TGG | - | chr8_3:7873311-7873330 | Msa1274080:CDS | 25.0% |
| ! | GAAAGAATTTACAATGATGT+TGG | - | chr8_3:7873333-7873352 | Msa1274080:CDS | 25.0% |
| ! | AAGAATTTACAATGATGTTG+GGG | - | chr8_3:7873335-7873354 | Msa1274080:CDS | 25.0% |
| ! | TCTACTGAAATAAGTACTTA+TGG | - | chr8_3:7873454-7873473 | Msa1274080:intron | 25.0% |
| ! | GAAATAAGCTGAAAATAAAG+AGG | - | chr8_3:7873661-7873680 | Msa1274080:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr8_3:7873874-7873893 | Msa1274080:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr8_3:7873875-7873894 | Msa1274080:intron | 25.0% |
| !! | TTGACTCTGTATGTTTATTT+TGG | + | chr8_3:7874123-7874142 | None:intergenic | 25.0% |
| ! | AAATAAACATACAGAGTCAA+AGG | - | chr8_3:7874123-7874142 | Msa1274080:intron | 25.0% |
| ! | AATAAACATACAGAGTCAAA+GGG | - | chr8_3:7874124-7874143 | Msa1274080:intron | 25.0% |
| ! | TTAAAAGCTAAGAGCAAAAA+AGG | + | chr8_3:7874253-7874272 | None:intergenic | 25.0% |
| ! | TGTTGCTATGAATTCAAAAA+AGG | - | chr8_3:7874273-7874292 | Msa1274080:intron | 25.0% |
| ! | ATGACACACTTTATCTTTAT+AGG | - | chr8_3:7874534-7874553 | Msa1274080:intron | 25.0% |
| ! | ACATTTCTATACCAAAGATT+TGG | + | chr8_3:7874795-7874814 | None:intergenic | 25.0% |
| !! | TTCAATTTCTTAAGAAGCAT+CGG | + | chr8_3:7874823-7874842 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAATACCTCAA+TGG | - | chr8_3:7874831-7874850 | Msa1274080:intron | 25.0% |
| !! | ACATAGATTTAGCCTATTTT+CGG | - | chr8_3:7875474-7875493 | Msa1274080:intron | 25.0% |
| !! | ATCATTTTCTATGTTAGTCA+TGG | - | chr8_3:7875960-7875979 | Msa1274080:intron | 25.0% |
| !! | TCATTTTCTATGTTAGTCAT+GGG | - | chr8_3:7875961-7875980 | Msa1274080:intron | 25.0% |
| ! | TAAATAGCAGAAAAAAGAAG+GGG | + | chr8_3:7876106-7876125 | None:intergenic | 25.0% |
| ! | GTAAATAGCAGAAAAAAGAA+GGG | + | chr8_3:7876107-7876126 | None:intergenic | 25.0% |
| ! | AGTAAATAGCAGAAAAAAGA+AGG | + | chr8_3:7876108-7876127 | None:intergenic | 25.0% |
| ! | TATCTATAAAAGACAATGCA+TGG | - | chr8_3:7876206-7876225 | Msa1274080:intron | 25.0% |
| ! | AACTAACCAAAAAAGGTTAA+TGG | + | chr8_3:7876473-7876492 | None:intergenic | 25.0% |
| ! | CAGGTATTTGAAGAAAAATA+AGG | + | chr8_3:7876698-7876717 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTGCTTAAAACA+TGG | - | chr8_3:7876735-7876754 | Msa1274080:intron | 25.0% |
| ! | TTTCATTTGAATTGCATGTT+AGG | - | chr8_3:7876786-7876805 | Msa1274080:intron | 25.0% |
| ! | TTATACATAGTACTATTTGG+GGG | + | chr8_3:7877168-7877187 | None:intergenic | 25.0% |
| ! | CTTATACATAGTACTATTTG+GGG | + | chr8_3:7877169-7877188 | None:intergenic | 25.0% |
| ! | CTCTTATACATAGTACTATT+TGG | + | chr8_3:7877171-7877190 | None:intergenic | 25.0% |
| ! | TTCAGAAAAATCTCATTGTT+GGG | - | chr8_3:7877243-7877262 | Msa1274080:intron | 25.0% |
| !! | GGTATCATGCTTTTATAATA+AGG | + | chr8_3:7877398-7877417 | None:intergenic | 25.0% |
| ! | TAAATTCACAAGTTATGTGA+TGG | - | chr8_3:7877562-7877581 | Msa1274080:intron | 25.0% |
| ! | TGGCAATTATTTAGATTACA+TGG | + | chr8_3:7877641-7877660 | None:intergenic | 25.0% |
| !!! | TTCCATTATTTTTCAATGGA+CGG | + | chr8_3:7877683-7877702 | None:intergenic | 25.0% |
| !! | AAAATTATTGCTGTTCTTAG+AGG | - | chr8_3:7877774-7877793 | Msa1274080:CDS | 25.0% |
| !! | GATGTTCTTTTGGTATATTA+TGG | - | chr8_3:7877796-7877815 | Msa1274080:CDS | 25.0% |
| !!! | GAATGGATTAATGTGAAATA+TGG | - | chr8_3:7877909-7877928 | Msa1274080:intron | 25.0% |
| !! | ATGGATTAATGTGAAATATG+GGG | - | chr8_3:7877911-7877930 | Msa1274080:intron | 25.0% |
| ! | ACCTGTGCAAAATTAATAAA+GGG | + | chr8_3:7878326-7878345 | None:intergenic | 25.0% |
| ! | TACCTGTGCAAAATTAATAA+AGG | + | chr8_3:7878327-7878346 | None:intergenic | 25.0% |
| !! | GTTTTTGTTAAAAAGAAGCA+AGG | + | chr8_3:7878481-7878500 | None:intergenic | 25.0% |
| !! | GGGAAGTACAAAATAAAAAT+TGG | + | chr8_3:7878714-7878733 | None:intergenic | 25.0% |
| ! | TCAAAATCTTCTTATTCACA+TGG | + | chr8_3:7878775-7878794 | None:intergenic | 25.0% |
| TGAAAAAGGTGAAATGAGAA+TGG | + | chr8_3:7873228-7873247 | None:intergenic | 30.0% | |
| AGAATTTACAATGATGTTGG+GGG | - | chr8_3:7873336-7873355 | Msa1274080:CDS | 30.0% | |
| ! | AGGATATTGCTGCAAATTTT+AGG | - | chr8_3:7873385-7873404 | Msa1274080:intron | 30.0% |
| !! | AAGCTATTTTGAAGAGCTTA+TGG | - | chr8_3:7873639-7873658 | Msa1274080:intron | 30.0% |
| ATGAATATGTCAATCCAAAC+AGG | + | chr8_3:7873699-7873718 | None:intergenic | 30.0% | |
| !! | GATTATTTCATTTAGCTCTC+CGG | - | chr8_3:7873733-7873752 | Msa1274080:intron | 30.0% |
| ATGGTAAAACTTCTTTATCG+TGG | - | chr8_3:7873978-7873997 | Msa1274080:CDS | 30.0% | |
| TGGTAAAACTTCTTTATCGT+GGG | - | chr8_3:7873979-7873998 | Msa1274080:CDS | 30.0% | |
| ! | TCTGAATCTCTGATACATTT+TGG | - | chr8_3:7874030-7874049 | Msa1274080:CDS | 30.0% |
| !!! | TGATACATTTTGGAGTGTAT+GGG | - | chr8_3:7874040-7874059 | Msa1274080:CDS | 30.0% |
| !!! | AAAGGAAAACCTTTTGGTTT+TGG | + | chr8_3:7874235-7874254 | None:intergenic | 30.0% |
| ! | AGCAAAAAAGGAAAACCTTT+TGG | + | chr8_3:7874241-7874260 | None:intergenic | 30.0% |
| GCTATGAATTCAAAAAAGGA+AGG | - | chr8_3:7874277-7874296 | Msa1274080:intron | 30.0% | |
| TTTGTTAGTTCAGACAAAGA+TGG | - | chr8_3:7874411-7874430 | Msa1274080:intron | 30.0% | |
| AGAAAATGAGAGAGAATGAA+AGG | - | chr8_3:7874472-7874491 | Msa1274080:intron | 30.0% | |
| ! | AAGCTGCATTTAAAACTTAC+TGG | + | chr8_3:7874576-7874595 | None:intergenic | 30.0% |
| TATAAGTAAGTATCTCACAG+AGG | + | chr8_3:7874693-7874712 | None:intergenic | 30.0% | |
| ! | AAATTGAAGTTGGTCAATCA+AGG | + | chr8_3:7874751-7874770 | None:intergenic | 30.0% |
| TAGGCCAACAAAAAATATGA+AGG | - | chr8_3:7875250-7875269 | Msa1274080:intron | 30.0% | |
| !!! | TGGACCTTCATATTTTTTGT+TGG | + | chr8_3:7875257-7875276 | None:intergenic | 30.0% |
| TAGACCAACAAAAAACATGA+AGG | + | chr8_3:7875310-7875329 | None:intergenic | 30.0% | |
| ! | CAACAGATTTTCAATAACAC+TGG | + | chr8_3:7875554-7875573 | None:intergenic | 30.0% |
| ! | CAGTGTTATTGAAAATCTGT+TGG | - | chr8_3:7875552-7875571 | Msa1274080:intron | 30.0% |
| TGTTATTGAAAATCTGTTGG+TGG | - | chr8_3:7875555-7875574 | Msa1274080:intron | 30.0% | |
| TGCCTAAATTGCAGAAATTT+GGG | - | chr8_3:7875662-7875681 | Msa1274080:intron | 30.0% | |
| AACATAAATTTCCACACTGT+GGG | + | chr8_3:7875838-7875857 | None:intergenic | 30.0% | |
| TAACATAAATTTCCACACTG+TGG | + | chr8_3:7875839-7875858 | None:intergenic | 30.0% | |
| ACAGTGTGGAAATTTATGTT+AGG | - | chr8_3:7875838-7875857 | Msa1274080:intron | 30.0% | |
| GCTATTTGTGTAAGAGAATT+AGG | - | chr8_3:7875894-7875913 | Msa1274080:intron | 30.0% | |
| AAATAGCAGAAAAAAGAAGG+GGG | + | chr8_3:7876105-7876124 | None:intergenic | 30.0% | |
| ATTTACTCTTCTTCGATTTC+TGG | - | chr8_3:7876121-7876140 | Msa1274080:intron | 30.0% | |
| !!! | TCACAACCATTAACCTTTTT+TGG | - | chr8_3:7876464-7876483 | Msa1274080:intron | 30.0% |
| ! | TTTTGTCTCTTTCAACATAG+TGG | - | chr8_3:7876831-7876850 | Msa1274080:intron | 30.0% |
| TTTGTCTCTTTCAACATAGT+GGG | - | chr8_3:7876832-7876851 | Msa1274080:intron | 30.0% | |
| GAAAAGTGAATGTCAAACTT+TGG | - | chr8_3:7876906-7876925 | Msa1274080:intron | 30.0% | |
| CGCTTGATATGAAAAATATC+AGG | - | chr8_3:7876967-7876986 | Msa1274080:intron | 30.0% | |
| AACTCGCTATGATAGAAAAT+TGG | - | chr8_3:7877000-7877019 | Msa1274080:intron | 30.0% | |
| !!! | TCTAATGTTTTGGTGCTTTT+GGG | + | chr8_3:7877209-7877228 | None:intergenic | 30.0% |
| !!! | TTCTAATGTTTTGGTGCTTT+TGG | + | chr8_3:7877210-7877229 | None:intergenic | 30.0% |
| !!! | GATTTTTCTGAAGTGCTATA+TGG | + | chr8_3:7877235-7877254 | None:intergenic | 30.0% |
| CTTCAGAAAAATCTCATTGT+TGG | - | chr8_3:7877242-7877261 | Msa1274080:intron | 30.0% | |
| GTAGAACTTACGTTATATGT+GGG | - | chr8_3:7877297-7877316 | Msa1274080:intron | 30.0% | |
| ACTATTTAGCACAAGCAATT+GGG | + | chr8_3:7877332-7877351 | None:intergenic | 30.0% | |
| GAAATATCACAAACAATAGC+TGG | + | chr8_3:7877661-7877680 | None:intergenic | 30.0% | |
| TTCCGTCCATTGAAAAATAA+TGG | - | chr8_3:7877678-7877697 | Msa1274080:intron | 30.0% | |
| ! | AACAGCAATAATTTTACAGC+AGG | + | chr8_3:7877769-7877788 | None:intergenic | 30.0% |
| AGTTAATGTATGTTGTGATG+TGG | - | chr8_3:7877831-7877850 | Msa1274080:CDS | 30.0% | |
| TTGTACTATGTTTCCATGTA+AGG | - | chr8_3:7877994-7878013 | Msa1274080:intron | 30.0% | |
| TGTACTATGTTTCCATGTAA+GGG | - | chr8_3:7877995-7878014 | Msa1274080:intron | 30.0% | |
| TAAACATAATGTGTATCCAG+TGG | - | chr8_3:7878044-7878063 | Msa1274080:intron | 30.0% | |
| TTCATTTAACACACGTTTGA+TGG | - | chr8_3:7878156-7878175 | Msa1274080:intron | 30.0% | |
| TCATTTAACACACGTTTGAT+GGG | - | chr8_3:7878157-7878176 | Msa1274080:intron | 30.0% | |
| !! | AAAAGAAGTATCAACGGTTA+GGG | + | chr8_3:7878301-7878320 | None:intergenic | 30.0% |
| ! | ACCCTTTATTAATTTTGCAC+AGG | - | chr8_3:7878322-7878341 | Msa1274080:intron | 30.0% |
| TACAATAGCATCACAATAGA+GGG | + | chr8_3:7878363-7878382 | None:intergenic | 30.0% | |
| ATACAATAGCATCACAATAG+AGG | + | chr8_3:7878364-7878383 | None:intergenic | 30.0% | |
| CTATTGTATTGAAAATCCAG+AGG | - | chr8_3:7878375-7878394 | Msa1274080:intron | 30.0% | |
| ! | TATCATCTTTGGTAGTTGTT+AGG | - | chr8_3:7878524-7878543 | Msa1274080:intron | 30.0% |
| ! | ATGGTAGGTTCTAATTCAAA+GGG | + | chr8_3:7878656-7878675 | None:intergenic | 30.0% |
| !!! | ACTTCCCTTTTTTTTCCTTT+AGG | - | chr8_3:7878727-7878746 | Msa1274080:intron | 30.0% |
| !!! | CTTCCCTTTTTTTTCCTTTA+GGG | - | chr8_3:7878728-7878747 | Msa1274080:intron | 30.0% |
| GTTCCCTAAAGGAAAAAAAA+GGG | + | chr8_3:7878734-7878753 | None:intergenic | 30.0% | |
| AGTTCCCTAAAGGAAAAAAA+AGG | + | chr8_3:7878735-7878754 | None:intergenic | 30.0% | |
| TGACTTGATTCAAATTAGTC+AGG | + | chr8_3:7878808-7878827 | None:intergenic | 30.0% | |
| CTATTGAGTAAAGATCTTCT+TGG | + | chr8_3:7878877-7878896 | None:intergenic | 30.0% | |
| ATAAGTATAGTCGTGATTGT+AGG | - | chr8_3:7878931-7878950 | Msa1274080:five_prime_UTR | 30.0% | |
| GCAATATCCTTGCAGAAATT+GGG | + | chr8_3:7873375-7873394 | None:intergenic | 35.0% | |
| AGCAATATCCTTGCAGAAAT+TGG | + | chr8_3:7873376-7873395 | None:intergenic | 35.0% | |
| CAGAAGAGCTTAGTGAAATA+AGG | + | chr8_3:7873501-7873520 | None:intergenic | 35.0% | |
| CTTATTTCACTAAGCTCTTC+TGG | - | chr8_3:7873499-7873518 | Msa1274080:intron | 35.0% | |
| TATGTCAATCCAAACAGGAA+CGG | + | chr8_3:7873694-7873713 | None:intergenic | 35.0% | |
| GCTGCAAAATCAAAACAAGT+AGG | + | chr8_3:7873942-7873961 | None:intergenic | 35.0% | |
| !!! | CTGATACATTTTGGAGTGTA+TGG | - | chr8_3:7874039-7874058 | Msa1274080:CDS | 35.0% |
| !! | TAATGATACCGCTGTTGTTT+TGG | - | chr8_3:7874076-7874095 | Msa1274080:CDS | 35.0% |
| !!! | AATGATACCGCTGTTGTTTT+GGG | - | chr8_3:7874077-7874096 | Msa1274080:CDS | 35.0% |
| AACCTAGTTGTTGATCTTTC+AGG | - | chr8_3:7874175-7874194 | Msa1274080:intron | 35.0% | |
| AGGCAAATCTTCTTCGATAA+AGG | - | chr8_3:7874195-7874214 | Msa1274080:intron | 35.0% | |
| GGCAAATCTTCTTCGATAAA+GGG | - | chr8_3:7874196-7874215 | Msa1274080:intron | 35.0% | |
| AAAAGCTCTCCAAAACCAAA+AGG | - | chr8_3:7874223-7874242 | Msa1274080:intron | 35.0% | |
| GGAAGAAAGAACTACATTAC+TGG | - | chr8_3:7874298-7874317 | Msa1274080:intron | 35.0% | |
| CTTTATCTTTATAGGCACCA+CGG | - | chr8_3:7874542-7874561 | Msa1274080:intron | 35.0% | |
| TTACTCTATAACCTACTAGC+TGG | - | chr8_3:7874615-7874634 | Msa1274080:intron | 35.0% | |
| TTGTCTCACTTTAGATTCGA+CGG | + | chr8_3:7875039-7875058 | None:intergenic | 35.0% | |
| ACATGAAGGTCCAAATGAAA+AGG | + | chr8_3:7875296-7875315 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | - | chr8_3:7875303-7875322 | Msa1274080:intron | 35.0% |
| GGTCTAAGTTAGCAAATTGT+AGG | - | chr8_3:7875324-7875343 | Msa1274080:intron | 35.0% | |
| GTTAGCAAATTGTAGGTCAT+AGG | - | chr8_3:7875331-7875350 | Msa1274080:intron | 35.0% | |
| ! | CTCAATTGGTTTCCGAAAAT+AGG | + | chr8_3:7875489-7875508 | None:intergenic | 35.0% |
| ! | ATTTTCGGAAACCAATTGAG+TGG | - | chr8_3:7875489-7875508 | Msa1274080:intron | 35.0% |
| TGCTTGTAATTCCACTCAAT+TGG | + | chr8_3:7875503-7875522 | None:intergenic | 35.0% | |
| !! | TGAAAATCTGTTGGTGGATT+TGG | - | chr8_3:7875561-7875580 | Msa1274080:intron | 35.0% |
| !! | GAAAATCTGTTGGTGGATTT+GGG | - | chr8_3:7875562-7875581 | Msa1274080:intron | 35.0% |
| CTGCCTAAATTGCAGAAATT+TGG | - | chr8_3:7875661-7875680 | Msa1274080:intron | 35.0% | |
| GACCCAAATTTCTGCAATTT+AGG | + | chr8_3:7875667-7875686 | None:intergenic | 35.0% | |
| TAATGTTAGGATCTCAACTG+TGG | - | chr8_3:7875797-7875816 | Msa1274080:intron | 35.0% | |
| AATGTTAGGATCTCAACTGT+GGG | - | chr8_3:7875798-7875817 | Msa1274080:intron | 35.0% | |
| ATGTTAGGAAAATGCTGATG+TGG | - | chr8_3:7875853-7875872 | Msa1274080:intron | 35.0% | |
| GTCAGAATTAGCATTTGAAG+CGG | - | chr8_3:7876183-7876202 | Msa1274080:intron | 35.0% | |
| ATAAAAGACAATGCATGGTG+AGG | - | chr8_3:7876211-7876230 | Msa1274080:intron | 35.0% | |
| !!! | AATCTTTTTGGAGTGAAGAG+TGG | + | chr8_3:7876400-7876419 | None:intergenic | 35.0% |
| AAAGGTTAATGGTTGTGAAG+AGG | + | chr8_3:7876462-7876481 | None:intergenic | 35.0% | |
| !! | AAAAATAAGGAAGGCATTGC+AGG | + | chr8_3:7876685-7876704 | None:intergenic | 35.0% |
| TGTTTGTGCTTAAAACATGG+TGG | - | chr8_3:7876738-7876757 | Msa1274080:intron | 35.0% | |
| TGACGAAGCAAAGAATAATG+TGG | - | chr8_3:7876939-7876958 | Msa1274080:intron | 35.0% | |
| !! | TTTAGAATGCCTTTTTCTCG+TGG | + | chr8_3:7877137-7877156 | None:intergenic | 35.0% |
| GGTAGAACTTACGTTATATG+TGG | - | chr8_3:7877296-7877315 | Msa1274080:intron | 35.0% | |
| CACTATTTAGCACAAGCAAT+TGG | + | chr8_3:7877333-7877352 | None:intergenic | 35.0% | |
| GTAGAAAAGCTCTCTTTCTT+AGG | - | chr8_3:7877362-7877381 | Msa1274080:intron | 35.0% | |
| AGCATGATACCTTCTTCAAA+TGG | - | chr8_3:7877407-7877426 | Msa1274080:intron | 35.0% | |
| GCATGATACCTTCTTCAAAT+GGG | - | chr8_3:7877408-7877427 | Msa1274080:intron | 35.0% | |
| CCACAACTTAATGTAAGTCT+GGG | + | chr8_3:7877511-7877530 | None:intergenic | 35.0% | |
| TCCACAACTTAATGTAAGTC+TGG | + | chr8_3:7877512-7877531 | None:intergenic | 35.0% | |
| ! | GTTCTTAGAGGATGTTCTTT+TGG | - | chr8_3:7877786-7877805 | Msa1274080:CDS | 35.0% |
| GAATGAAGTGTACACAAACA+CGG | + | chr8_3:7878086-7878105 | None:intergenic | 35.0% | |
| GTCTTGTAATGTGTGTGAAA+AGG | + | chr8_3:7878108-7878127 | None:intergenic | 35.0% | |
| AACGTGTGTTAAATGAACAC+AGG | + | chr8_3:7878153-7878172 | None:intergenic | 35.0% | |
| CATTTAACACACGTTTGATG+GGG | - | chr8_3:7878158-7878177 | Msa1274080:intron | 35.0% | |
| ATTTAACACACGTTTGATGG+GGG | - | chr8_3:7878159-7878178 | Msa1274080:intron | 35.0% | |
| TTGATATGTTGGCAACAAGT+CGG | + | chr8_3:7878230-7878249 | None:intergenic | 35.0% | |
| ATCAACGGTTAGGGAATTTA+TGG | + | chr8_3:7878292-7878311 | None:intergenic | 35.0% | |
| !! | CAAAAGAAGTATCAACGGTT+AGG | + | chr8_3:7878302-7878321 | None:intergenic | 35.0% |
| !! | AGGGTCAAAAGAAGTATCAA+CGG | + | chr8_3:7878307-7878326 | None:intergenic | 35.0% |
| TTGTATTGAAAATCCAGAGG+AGG | - | chr8_3:7878378-7878397 | Msa1274080:intron | 35.0% | |
| TGTATTGAAAATCCAGAGGA+GGG | - | chr8_3:7878379-7878398 | Msa1274080:intron | 35.0% | |
| TAGCATGAATGCTGATGATA+TGG | + | chr8_3:7878506-7878525 | None:intergenic | 35.0% | |
| AGCATTCATGCTATCATCTT+TGG | - | chr8_3:7878513-7878532 | Msa1274080:intron | 35.0% | |
| GTAGTTGTTAGGTAAATCCT+CGG | - | chr8_3:7878535-7878554 | Msa1274080:intron | 35.0% | |
| ACACATGAAACATCAGGTAA+AGG | + | chr8_3:7878567-7878586 | None:intergenic | 35.0% | |
| ! | TGGTAGGTTCTAATTCAAAG+GGG | + | chr8_3:7878655-7878674 | None:intergenic | 35.0% |
| ! | CATGGTAGGTTCTAATTCAA+AGG | + | chr8_3:7878657-7878676 | None:intergenic | 35.0% |
| CAAGAAATACAGTTCCCTAA+AGG | + | chr8_3:7878745-7878764 | None:intergenic | 35.0% | |
| ACTTGATCCCAATTTCTGCA+AGG | - | chr8_3:7873365-7873384 | Msa1274080:intron | 40.0% | |
| AGCTCTTCATCAAACAGTGA+TGG | - | chr8_3:7873959-7873978 | Msa1274080:intron | 40.0% | |
| AACTTCTTTATCGTGGGAAC+AGG | - | chr8_3:7873985-7874004 | Msa1274080:CDS | 40.0% | |
| TCACTTTGCTTTATCACCTG+AGG | - | chr8_3:7874147-7874166 | Msa1274080:intron | 40.0% | |
| CACTTTGCTTTATCACCTGA+GGG | - | chr8_3:7874148-7874167 | Msa1274080:intron | 40.0% | |
| ACTTTGCTTTATCACCTGAG+GGG | - | chr8_3:7874149-7874168 | Msa1274080:intron | 40.0% | |
| TGCCTGAAAGATCAACAACT+AGG | + | chr8_3:7874180-7874199 | None:intergenic | 40.0% | |
| TACTAGGCATTCACTTGCTT+TGG | - | chr8_3:7874373-7874392 | Msa1274080:intron | 40.0% | |
| ACTAGGCATTCACTTGCTTT+GGG | - | chr8_3:7874374-7874393 | Msa1274080:intron | 40.0% | |
| !! | TTCACTTGCTTTGGGGTAAA+TGG | - | chr8_3:7874382-7874401 | Msa1274080:intron | 40.0% |
| TTCAGACAAAGATGGTATGC+AGG | - | chr8_3:7874419-7874438 | Msa1274080:intron | 40.0% | |
| GATGGTATGCAGGAAGAAAA+TGG | - | chr8_3:7874429-7874448 | Msa1274080:intron | 40.0% | |
| GATAAAGTGTGTCATGTGCA+TGG | + | chr8_3:7874529-7874548 | None:intergenic | 40.0% | |
| ATATAGATGCACCAGCTAGT+AGG | + | chr8_3:7874629-7874648 | None:intergenic | 40.0% | |
| AAGTATCTCACAGAGGTCTA+AGG | + | chr8_3:7874686-7874705 | None:intergenic | 40.0% | |
| AATCACAAGACTGACCATTG+AGG | + | chr8_3:7874848-7874867 | None:intergenic | 40.0% | |
| CGACAAAGCTGATCATTCAA+TGG | + | chr8_3:7874981-7875000 | None:intergenic | 40.0% | |
| ! | ATCAGCTTTGTCGCAAATTG+TGG | - | chr8_3:7874988-7875007 | Msa1274080:intron | 40.0% |
| AAACCCATACGTATTGAACC+CGG | - | chr8_3:7875113-7875132 | Msa1274080:intron | 40.0% | |
| AGAAATATTGTGTGTCGCAG+TGG | + | chr8_3:7875166-7875185 | None:intergenic | 40.0% | |
| ! | CAAGTGTGCACCTTTTCATT+TGG | - | chr8_3:7875283-7875302 | Msa1274080:intron | 40.0% |
| ! | CTCATTTTGTCTCAACAACC+TGG | + | chr8_3:7875380-7875399 | None:intergenic | 40.0% |
| CAGGTTGTTGAGACAAAATG+AGG | - | chr8_3:7875378-7875397 | Msa1274080:intron | 40.0% | |
| TAAATGGCGGCAAATATTGC+AGG | - | chr8_3:7875599-7875618 | Msa1274080:intron | 40.0% | |
| AAATGGCGGCAAATATTGCA+GGG | - | chr8_3:7875600-7875619 | Msa1274080:intron | 40.0% | |
| !!! | AGTGTTTTGGTGCAACATCA+TGG | + | chr8_3:7875643-7875662 | None:intergenic | 40.0% |
| ! | CTGCAATTTAGGCAGTGTTT+TGG | + | chr8_3:7875656-7875675 | None:intergenic | 40.0% |
| ! | CTGATAAGTGTTGTCTATGG+CGG | + | chr8_3:7875708-7875727 | None:intergenic | 40.0% |
| ! | GTGCTGATAAGTGTTGTCTA+TGG | + | chr8_3:7875711-7875730 | None:intergenic | 40.0% |
| AATCTATCCACAGATCAGCA+CGG | + | chr8_3:7875737-7875756 | None:intergenic | 40.0% | |
| AAATTTCCACACTGTGGGTT+AGG | + | chr8_3:7875833-7875852 | None:intergenic | 40.0% | |
| AGTGATTGAGTAGAGAGAGA+AGG | - | chr8_3:7875923-7875942 | Msa1274080:intron | 40.0% | |
| GTGATTGAGTAGAGAGAGAA+GGG | - | chr8_3:7875924-7875943 | Msa1274080:intron | 40.0% | |
| TGATTGAGTAGAGAGAGAAG+GGG | - | chr8_3:7875925-7875944 | Msa1274080:intron | 40.0% | |
| AAAAAGAAGGGGGAAATCAC+TGG | + | chr8_3:7876095-7876114 | None:intergenic | 40.0% | |
| TACGTGAGAACTATAAGACG+TGG | - | chr8_3:7876313-7876332 | Msa1274080:intron | 40.0% | |
| GAGAACTATAAGACGTGGTA+TGG | - | chr8_3:7876318-7876337 | Msa1274080:intron | 40.0% | |
| AATGGTTGTGAAGAGGAGAT+GGG | + | chr8_3:7876455-7876474 | None:intergenic | 40.0% | |
| TAATGGTTGTGAAGAGGAGA+TGG | + | chr8_3:7876456-7876475 | None:intergenic | 40.0% | |
| TGCAACATCATGCCTGTAAT+TGG | + | chr8_3:7876535-7876554 | None:intergenic | 40.0% | |
| AACTACAGAGTTCTATGCAC+AGG | - | chr8_3:7876564-7876583 | Msa1274080:intron | 40.0% | |
| ACTACAGAGTTCTATGCACA+GGG | - | chr8_3:7876565-7876584 | Msa1274080:intron | 40.0% | |
| CTCAAGCTCAAAATCATGCA+TGG | - | chr8_3:7877111-7877130 | Msa1274080:intron | 40.0% | |
| AAGCTCTCTTTCTTAGGCAT+AGG | - | chr8_3:7877368-7877387 | Msa1274080:intron | 40.0% | |
| TGATATGGCCCATTTGAAGA+AGG | + | chr8_3:7877419-7877438 | None:intergenic | 40.0% | |
| ! | CCCAGACTTACATTAAGTTG+TGG | - | chr8_3:7877508-7877527 | Msa1274080:intron | 40.0% |
| GTGATGTGGCACATGATTTA+AGG | - | chr8_3:7877845-7877864 | Msa1274080:CDS | 40.0% | |
| GAAGTTCGTGTACGATATCA+TGG | - | chr8_3:7877867-7877886 | Msa1274080:intron | 40.0% | |
| CGTGTACGATATCATGGATT+CGG | - | chr8_3:7877873-7877892 | Msa1274080:intron | 40.0% | |
| ! | ACGATATCATGGATTCGGTA+AGG | - | chr8_3:7877878-7877897 | Msa1274080:intron | 40.0% |
| TCGGTAAGGATGAAGATGAA+TGG | - | chr8_3:7877892-7877911 | Msa1274080:intron | 40.0% | |
| AAAGGCTAGAATCCCTTACA+TGG | + | chr8_3:7878010-7878029 | None:intergenic | 40.0% | |
| AACACGGCAACAATCATATG+TGG | + | chr8_3:7878070-7878089 | None:intergenic | 40.0% | |
| !! | CTACGTTTGGGTTGATATGT+TGG | + | chr8_3:7878241-7878260 | None:intergenic | 40.0% |
| CAGACTTGTCATGGTAAAAC+CGG | + | chr8_3:7878442-7878461 | None:intergenic | 40.0% | |
| ! | GTTTTACCATGACAAGTCTG+AGG | - | chr8_3:7878442-7878461 | Msa1274080:intron | 40.0% |
| CCAAAGACACATGAAACATC+AGG | + | chr8_3:7878573-7878592 | None:intergenic | 40.0% | |
| CCTGATGTTTCATGTGTCTT+TGG | - | chr8_3:7878570-7878589 | Msa1274080:intron | 40.0% | |
| ATGTTTCATGTGTCTTTGGC+AGG | - | chr8_3:7878574-7878593 | Msa1274080:intron | 40.0% | |
| ACCTCAGATTCTTCTTGTGT+TGG | + | chr8_3:7878632-7878651 | None:intergenic | 40.0% | |
| GAACTCAACTGCTCGGAAAT+CGG | - | chr8_3:7873039-7873058 | Msa1274080:three_prime_UTR | 45.0% | |
| TCCTAAGCTCTCTTTAGACG+AGG | - | chr8_3:7873196-7873215 | Msa1274080:three_prime_UTR | 45.0% | |
| ACCTCGTCTAAAGAGAGCTT+AGG | + | chr8_3:7873200-7873219 | None:intergenic | 45.0% | |
| ATCGTGGGAACAGGTTGTTA+AGG | - | chr8_3:7873994-7874013 | Msa1274080:CDS | 45.0% | |
| CCTGAAACCCAAAACAACAG+CGG | + | chr8_3:7874087-7874106 | None:intergenic | 45.0% | |
| CTAGGCATTCACTTGCTTTG+GGG | - | chr8_3:7874375-7874394 | Msa1274080:intron | 45.0% | |
| TTATAGGCACCACGGATACA+AGG | - | chr8_3:7874550-7874569 | Msa1274080:intron | 45.0% | |
| ! | GAAGTTGGTCAATCAAGGAC+TGG | + | chr8_3:7874746-7874765 | None:intergenic | 45.0% |
| CTCATGCAATTGAAAGGACC+GGG | + | chr8_3:7875134-7875153 | None:intergenic | 45.0% | |
| CCTCATGCAATTGAAAGGAC+CGG | + | chr8_3:7875135-7875154 | None:intergenic | 45.0% | |
| GGCTACCTCATGCAATTGAA+AGG | + | chr8_3:7875140-7875159 | None:intergenic | 45.0% | |
| TATTGTGTGTCGCAGTGGTT+AGG | + | chr8_3:7875161-7875180 | None:intergenic | 45.0% | |
| ! | AAGGTGCACACTTGCTAACT+TGG | + | chr8_3:7875277-7875296 | None:intergenic | 45.0% |
| TTGTCTCAACAACCTGGACA+TGG | + | chr8_3:7875374-7875393 | None:intergenic | 45.0% | |
| CTCGTCGATATGGTAAATGG+CGG | - | chr8_3:7875586-7875605 | Msa1274080:intron | 45.0% | |
| ! | TTTGGTGCAACATCATGGCA+GGG | + | chr8_3:7875638-7875657 | None:intergenic | 45.0% |
| !! | TTTTGGTGCAACATCATGGC+AGG | + | chr8_3:7875639-7875658 | None:intergenic | 45.0% |
| AATGCTGATGTGGCAGAGTT+TGG | - | chr8_3:7875863-7875882 | Msa1274080:intron | 45.0% | |
| TGATGTGGCAGAGTTTGGTA+AGG | - | chr8_3:7875868-7875887 | Msa1274080:intron | 45.0% | |
| GATGTGGCAGAGTTTGGTAA+GGG | - | chr8_3:7875869-7875888 | Msa1274080:intron | 45.0% | |
| ! | TCTGTAGGAGCTTTGACTCT+GGG | - | chr8_3:7876003-7876022 | Msa1274080:intron | 45.0% |
| GGCTCTTAACACATAATGCC+AGG | - | chr8_3:7876142-7876161 | Msa1274080:intron | 45.0% | |
| AGATCTGCAGCTTGAATACC+TGG | + | chr8_3:7876163-7876182 | None:intergenic | 45.0% | |
| TTGTGAAGAGGAGATGGGTA+TGG | + | chr8_3:7876450-7876469 | None:intergenic | 45.0% | |
| CTACAGAGTTCTATGCACAG+GGG | - | chr8_3:7876566-7876585 | Msa1274080:intron | 45.0% | |
| TTAGCACAAGCAATTGGGCA+AGG | + | chr8_3:7877327-7877346 | None:intergenic | 45.0% | |
| ! | GACCATGAAAGCGTGTGATA+TGG | + | chr8_3:7877434-7877453 | None:intergenic | 45.0% |
| TTTCCCTCAAATTCCTGGTC+TGG | + | chr8_3:7877456-7877475 | None:intergenic | 45.0% | |
| !! | TCGCTTTTCCCTCAAATTCC+TGG | + | chr8_3:7877461-7877480 | None:intergenic | 45.0% |
| !! | TGACACTCTGAAGCTTCCAA+CGG | + | chr8_3:7877954-7877973 | None:intergenic | 45.0% |
| ! | TTCAGAGTGTCACAAGGTGA+AGG | - | chr8_3:7877962-7877981 | Msa1274080:intron | 45.0% |
| CAACAATCATATGTGGCCAC+TGG | + | chr8_3:7878063-7878082 | None:intergenic | 45.0% | |
| ! | CGGTTGACTTCGCAAACATT+TGG | + | chr8_3:7878210-7878229 | None:intergenic | 45.0% |
| AGATCACCTCAGACTTGTCA+TGG | + | chr8_3:7878451-7878470 | None:intergenic | 45.0% | |
| TCAGGTAAAGGTAACATCCG+AGG | + | chr8_3:7878555-7878574 | None:intergenic | 45.0% | |
| TTTGGCAGGAAGAAGTTCGT+TGG | - | chr8_3:7878588-7878607 | Msa1274080:intron | 45.0% | |
| TTGGCAGGAAGAAGTTCGTT+GGG | - | chr8_3:7878589-7878608 | Msa1274080:intron | 45.0% | |
| GCCAACACAAGAAGAATCTG+AGG | - | chr8_3:7878628-7878647 | Msa1274080:intron | 45.0% | |
| AGTCATGTGTATCCGTTGCA+AGG | - | chr8_3:7878823-7878842 | Msa1274080:five_prime_UTR | 45.0% | |
| GTCATGTGTATCCGTTGCAA+GGG | - | chr8_3:7878824-7878843 | Msa1274080:five_prime_UTR | 45.0% | |
| CTCATAGAGATCCCTTGCAA+CGG | + | chr8_3:7878838-7878857 | None:intergenic | 45.0% | |
| !!! | AATAAAATAAAAAATCTTTT+TGG | + | chr8_3:7876412-7876431 | None:intergenic | 5.0% |
| GGCAACTGAACTCAACTGCT+CGG | - | chr8_3:7873032-7873051 | Msa1274080:three_prime_UTR | 50.0% | |
| CTTGCTTTGGCATGCAATCG+CGG | + | chr8_3:7873094-7873113 | None:intergenic | 50.0% | |
| !! | GTGAATCGTGCTGCTTGCTT+TGG | + | chr8_3:7873107-7873126 | None:intergenic | 50.0% |
| GGACTATTGCCGTTCCTGTT+TGG | - | chr8_3:7873682-7873701 | Msa1274080:intron | 50.0% | |
| CGTAACACAAAGGCCCTGTT+TGG | + | chr8_3:7873891-7873910 | None:intergenic | 50.0% | |
| !!! | CCGCTGTTGTTTTGGGTTTC+AGG | - | chr8_3:7874084-7874103 | Msa1274080:CDS | 50.0% |
| !! | ACTTACTGGCCTTGTATCCG+TGG | + | chr8_3:7874562-7874581 | None:intergenic | 50.0% |
| ACTGGCGTTACAGAGGTCTA+AGG | + | chr8_3:7874728-7874747 | None:intergenic | 50.0% | |
| ! | ATCAAGGACTGGCGTTACAG+AGG | + | chr8_3:7874735-7874754 | None:intergenic | 50.0% |
| GGACCGGGTTCAATACGTAT+GGG | + | chr8_3:7875119-7875138 | None:intergenic | 50.0% | |
| AGGACCGGGTTCAATACGTA+TGG | + | chr8_3:7875120-7875139 | None:intergenic | 50.0% | |
| CCGGTCCTTTCAATTGCATG+AGG | - | chr8_3:7875132-7875151 | Msa1274080:intron | 50.0% | |
| AGACTTCATGAGCCATGTCC+AGG | - | chr8_3:7875359-7875378 | Msa1274080:intron | 50.0% | |
| GGCCTCGTCGATATGGTAAA+TGG | - | chr8_3:7875583-7875602 | Msa1274080:intron | 50.0% | |
| CGCCATTTACCATATCGACG+AGG | + | chr8_3:7875588-7875607 | None:intergenic | 50.0% | |
| TGCAACATCATGGCAGGGTA+TGG | + | chr8_3:7875633-7875652 | None:intergenic | 50.0% | |
| !! | GTGTTGTCTATGGCGGATGA+CGG | + | chr8_3:7875701-7875720 | None:intergenic | 50.0% |
| !! | CACACTGTGGGTTAGGAAGT+AGG | + | chr8_3:7875826-7875845 | None:intergenic | 50.0% |
| CTACTTCCTAACCCACAGTG+TGG | - | chr8_3:7875824-7875843 | Msa1274080:intron | 50.0% | |
| AGTCATGGGCAGAGAACGAA+CGG | - | chr8_3:7875975-7875994 | Msa1274080:intron | 50.0% | |
| GAACGAACGGTGTTCTCTGT+AGG | - | chr8_3:7875988-7876007 | Msa1274080:intron | 50.0% | |
| ! | CTCTGTAGGAGCTTTGACTC+TGG | - | chr8_3:7876002-7876021 | Msa1274080:intron | 50.0% |
| TGGAGTGAAGAGTGGTGACT+TGG | + | chr8_3:7876392-7876411 | None:intergenic | 50.0% | |
| TGAAGAGGAGATGGGTATGG+TGG | + | chr8_3:7876447-7876466 | None:intergenic | 50.0% | |
| !! | GAAGGCATTGCAGGCATGAA+AGG | + | chr8_3:7876676-7876695 | None:intergenic | 50.0% |
| CATGCATGGCCACGAGAAAA+AGG | - | chr8_3:7877125-7877144 | Msa1274080:intron | 50.0% | |
| CTCATTGTTGGGCACTTCAG+CGG | - | chr8_3:7877254-7877273 | Msa1274080:intron | 50.0% | |
| TCATTGTTGGGCACTTCAGC+GGG | - | chr8_3:7877255-7877274 | Msa1274080:intron | 50.0% | |
| GGCCATATCACACGCTTTCA+TGG | - | chr8_3:7877429-7877448 | Msa1274080:intron | 50.0% | |
| TGGTCCAGACCAGGAATTTG+AGG | - | chr8_3:7877449-7877468 | Msa1274080:intron | 50.0% | |
| GGTCCAGACCAGGAATTTGA+GGG | - | chr8_3:7877450-7877469 | Msa1274080:intron | 50.0% | |
| !! | GACACTCTGAAGCTTCCAAC+GGG | + | chr8_3:7877953-7877972 | None:intergenic | 50.0% |
| ! | GGAAGCTTCAGAGTGTCACA+AGG | - | chr8_3:7877956-7877975 | Msa1274080:intron | 50.0% |
| GAGTGTCACAAGGTGAAGGA+AGG | - | chr8_3:7877966-7877985 | Msa1274080:intron | 50.0% | |
| GTAGCTGCATCTTCACTGTC+CGG | - | chr8_3:7878420-7878439 | Msa1274080:intron | 50.0% | |
| GTTGGGACAGTTTGTGCTGT+AGG | - | chr8_3:7878606-7878625 | Msa1274080:intron | 50.0% | |
| TTCGCTATGGGGTTCATGGT+AGG | + | chr8_3:7878671-7878690 | None:intergenic | 50.0% | |
| CAAGTTCGCTATGGGGTTCA+TGG | + | chr8_3:7878675-7878694 | None:intergenic | 50.0% | |
| TGAACCCCATAGCGAACTTG+TGG | - | chr8_3:7878675-7878694 | Msa1274080:intron | 50.0% | |
| GAACCCCATAGCGAACTTGT+GGG | - | chr8_3:7878676-7878695 | Msa1274080:intron | 50.0% | |
| AACCCCATAGCGAACTTGTG+GGG | - | chr8_3:7878677-7878696 | Msa1274080:intron | 50.0% | |
| ATCCCCACAAGTTCGCTATG+GGG | + | chr8_3:7878682-7878701 | None:intergenic | 50.0% | |
| CATCCCCACAAGTTCGCTAT+GGG | + | chr8_3:7878683-7878702 | None:intergenic | 50.0% | |
| TCATCCCCACAAGTTCGCTA+TGG | + | chr8_3:7878684-7878703 | None:intergenic | 50.0% | |
| CGTTGCAAGGGATCTCTATG+AGG | - | chr8_3:7878836-7878855 | Msa1274080:five_prime_UTR | 50.0% | |
| CTCAACTGCTCGGAAATCGG+CGG | - | chr8_3:7873042-7873061 | Msa1274080:three_prime_UTR | 55.0% | |
| GGCATGCAATCGCGGAATTG+CGG | + | chr8_3:7873086-7873105 | None:intergenic | 55.0% | |
| ! | TTGGGTTTCAGGTGCAGCAG+TGG | - | chr8_3:7874095-7874114 | Msa1274080:intron | 55.0% |
| ACAACTAGGTTCAGCCCCTC+AGG | + | chr8_3:7874166-7874185 | None:intergenic | 55.0% | |
| GGATTTGGGCCTCGTCGATA+TGG | - | chr8_3:7875576-7875595 | Msa1274080:intron | 55.0% | |
| !! | CTATGGCGGATGACGGTATG+TGG | + | chr8_3:7875694-7875713 | None:intergenic | 55.0% |
| CGGGAGGAATTGGAGTTGTG+CGG | - | chr8_3:7877274-7877293 | Msa1274080:intron | 55.0% | |
| GGGAGGAATTGGAGTTGTGC+GGG | - | chr8_3:7877275-7877294 | Msa1274080:intron | 55.0% | |
| ACGCTTTCATGGTCCAGACC+AGG | - | chr8_3:7877440-7877459 | Msa1274080:intron | 55.0% | |
| !! | CTCTGAAGCTTCCAACGGGA+TGG | + | chr8_3:7877949-7877968 | None:intergenic | 55.0% |
| CGCTATCATGTTCCCTCCTC+TGG | + | chr8_3:7878394-7878413 | None:intergenic | 55.0% | |
| AACTGCTCGGAAATCGGCGG+TGG | - | chr8_3:7873045-7873064 | Msa1274080:three_prime_UTR | 60.0% | |
| ! | GCACAGTCCGTGCTGATCTG+TGG | - | chr8_3:7875727-7875746 | Msa1274080:intron | 60.0% |
| TTGTTGGGCACTTCAGCGGG+AGG | - | chr8_3:7877258-7877277 | Msa1274080:intron | 60.0% | |
| GGCACTTCAGCGGGAGGAAT+TGG | - | chr8_3:7877264-7877283 | Msa1274080:intron | 60.0% | |
| GCGACAGAGATCCATCCCGT+TGG | - | chr8_3:7877935-7877954 | Msa1274080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 7872991 | 7878984 | 7872991 | ID=Msa1274080;Name=Msa1274080 |
| chr8_3 | mRNA | 7872991 | 7878984 | 7872991 | ID=Msa1274080-mRNA-1;Parent=Msa1274080;Name=Msa1274080-mRNA-1;_AED=0.28;_eAED=0.28;_QI=173|0.83|1|1|0.83|0.71|7|281|226 |
| chr8_3 | exon | 7872991 | 7873379 | 7872991 | ID=Msa1274080-mRNA-1:exon:3102;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7873512 | 7873631 | 7873512 | ID=Msa1274080-mRNA-1:exon:3101;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7873965 | 7874108 | 7873965 | ID=Msa1274080-mRNA-1:exon:3100;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7875382 | 7875433 | 7875382 | ID=Msa1274080-mRNA-1:exon:3099;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7875748 | 7875811 | 7875748 | ID=Msa1274080-mRNA-1:exon:3098;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7877731 | 7877869 | 7877731 | ID=Msa1274080-mRNA-1:exon:3097;Parent=Msa1274080-mRNA-1 |
| chr8_3 | exon | 7878758 | 7878984 | 7878758 | ID=Msa1274080-mRNA-1:exon:3096;Parent=Msa1274080-mRNA-1 |
| chr8_3 | five_prime_UTR | 7878812 | 7878984 | 7878812 | ID=Msa1274080-mRNA-1:five_prime_utr;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7878758 | 7878811 | 7878758 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7877731 | 7877869 | 7877731 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7875748 | 7875811 | 7875748 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7875382 | 7875433 | 7875382 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7873965 | 7874108 | 7873965 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7873512 | 7873631 | 7873512 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | CDS | 7873272 | 7873379 | 7873272 | ID=Msa1274080-mRNA-1:cds;Parent=Msa1274080-mRNA-1 |
| chr8_3 | three_prime_UTR | 7872991 | 7873271 | 7872991 | ID=Msa1274080-mRNA-1:three_prime_utr;Parent=Msa1274080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
