Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274260 | sp|Q9XI47|SHH1_ARATH | 45.528 | 246 | 125 | 2 | 11 | 247 | 11 | 256 | 2.14e-70 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274260 | A0A072TMY2 | 97.037 | 270 | 8 | 0 | 1 | 270 | 1 | 270 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1274080 | Msa1274260 | 0.935676 | 5.827231e-97 | -8.615850e-47 |
| Msa1274260 | Msa1376660 | 0.804925 | 1.709167e-49 | -8.615850e-47 |
| Msa0579080 | Msa1274260 | 0.813400 | 2.609114e-51 | -8.615850e-47 |
| Msa0579220 | Msa1274260 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274260 | MtrunA17_Chr8g0340501 | 97.037 | 270 | 8 | 0 | 1 | 270 | 1 | 270 | 0.0 | 545 |
| Msa1274260 | MtrunA17_Chr3g0140441 | 39.331 | 239 | 123 | 3 | 11 | 247 | 12 | 230 | 7.44e-53 | 171 |
| Msa1274260 | MtrunA17_Chr8g0360221 | 39.431 | 246 | 138 | 2 | 13 | 247 | 13 | 258 | 1.14e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274260 | AT1G15215.2 | 45.528 | 246 | 125 | 2 | 11 | 247 | 11 | 256 | 2.17e-71 | 220 |
| Msa1274260 | AT1G15215.3 | 45.868 | 242 | 120 | 3 | 11 | 241 | 11 | 252 | 2.34e-68 | 212 |
| Msa1274260 | AT1G15215.4 | 46.154 | 234 | 117 | 2 | 11 | 235 | 11 | 244 | 7.67e-68 | 211 |
| Msa1274260 | AT3G18380.1 | 40.000 | 260 | 131 | 4 | 13 | 247 | 13 | 272 | 5.12e-51 | 171 |
| Msa1274260 | AT3G18380.3 | 39.535 | 258 | 133 | 4 | 13 | 247 | 13 | 270 | 3.00e-50 | 169 |
| Msa1274260 | AT3G18380.2 | 39.847 | 261 | 131 | 5 | 13 | 247 | 13 | 273 | 5.33e-50 | 168 |
| Msa1274260 | AT1G15215.1 | 41.096 | 146 | 77 | 2 | 11 | 147 | 11 | 156 | 1.75e-29 | 109 |
Find 88 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATATCCTTGCAGAAAT+TGG | 0.087682 | 8_3:-7990991 | None:intergenic |
| TTGACTCTGTATGTTTATTT+TGG | 0.149207 | 8_3:-7991738 | None:intergenic |
| AACCTAGTTGTTGATCTTTC+AGG | 0.153320 | 8_3:+7991793 | Msa1274260:CDS |
| AGGCAAATCTTCTTCGATAA+AGG | 0.253676 | 8_3:+7991813 | Msa1274260:CDS |
| GAATGGATTAATGTGAAATA+TGG | 0.288200 | 8_3:+7995525 | Msa1274260:CDS |
| CGCTATCATGTTCCCTCCTC+TGG | 0.309106 | 8_3:-7996007 | None:intergenic |
| GGCAAATCTTCTTCGATAAA+GGG | 0.336483 | 8_3:+7991814 | Msa1274260:CDS |
| TTATTTGTAGATACTGGAAT+TGG | 0.344154 | 8_3:+7990929 | Msa1274260:intron |
| AAAGAATTTACAATGATGTT+GGG | 0.374705 | 8_3:+7990952 | Msa1274260:CDS |
| GAAAGAATTTACAATGATGT+TGG | 0.378081 | 8_3:+7990951 | Msa1274260:CDS |
| ACCTCAGATTCTTCTTGTGT+TGG | 0.381816 | 8_3:-7996245 | None:intergenic |
| GTGAATCGTGCTGCTTGCTT+TGG | 0.392220 | 8_3:-7990722 | None:intergenic |
| CTATTGAGTAAAGATCTTCT+TGG | 0.392507 | 8_3:-7996490 | None:intergenic |
| AACTTCTTTATCGTGGGAAC+AGG | 0.393161 | 8_3:+7991603 | Msa1274260:CDS |
| CATCCCCACAAGTTCGCTAT+GGG | 0.406353 | 8_3:-7996296 | None:intergenic |
| CAAGTTCGCTATGGGGTTCA+TGG | 0.408654 | 8_3:-7996288 | None:intergenic |
| CACTTTGCTTTATCACCTGA+GGG | 0.424676 | 8_3:+7991766 | Msa1274260:CDS |
| AATGGATTAATGTGAAATAT+GGG | 0.432813 | 8_3:+7995526 | Msa1274260:CDS |
| CATGGTAGGTTCTAATTCAA+AGG | 0.438209 | 8_3:-7996270 | None:intergenic |
| GAACTCAACTGCTCGGAAAT+CGG | 0.438641 | 8_3:+7990657 | Msa1274260:five_prime_UTR |
| TGACTTGATTCAAATTAGTC+AGG | 0.450579 | 8_3:-7996421 | None:intergenic |
| GCAATATCCTTGCAGAAATT+GGG | 0.454713 | 8_3:-7990990 | None:intergenic |
| ATAAGTATAGTCGTGATTGT+AGG | 0.455631 | 8_3:+7996547 | Msa1274260:three_prime_UTR |
| AATAAAATTACAAAGTTAAG+TGG | 0.456885 | 8_3:+7990629 | Msa1274260:five_prime_UTR |
| ATACAATAGCATCACAATAG+AGG | 0.459718 | 8_3:-7995977 | None:intergenic |
| TCATCCCCACAAGTTCGCTA+TGG | 0.466754 | 8_3:-7996297 | None:intergenic |
| ATGGTAGGTTCTAATTCAAA+GGG | 0.467786 | 8_3:-7996269 | None:intergenic |
| GACACTCTGAAGCTTCCAAC+GGG | 0.471475 | 8_3:-7995566 | None:intergenic |
| CTTGCTTTGGCATGCAATCG+CGG | 0.473854 | 8_3:-7990709 | None:intergenic |
| GAAGTTCGTGTACGATATCA+TGG | 0.474345 | 8_3:+7995483 | Msa1274260:CDS |
| GTTGGGACAGTTTGTGCTGT+AGG | 0.490372 | 8_3:+7996222 | Msa1274260:CDS |
| AACTGCTCGGAAATCGGCGG+TGG | 0.490944 | 8_3:+7990663 | Msa1274260:five_prime_UTR |
| CAGACTTGTCATGGTAAAAC+CGG | 0.492608 | 8_3:-7996055 | None:intergenic |
| ACAACTAGGTTCAGCCCCTC+AGG | 0.495898 | 8_3:-7991781 | None:intergenic |
| ACCTCGTCTAAAGAGAGCTT+AGG | 0.500697 | 8_3:-7990815 | None:intergenic |
| TTGGCAGGAAGAAGTTCGTT+GGG | 0.502315 | 8_3:+7996205 | Msa1274260:intron |
| GTAGCTGCATCTTCACTGTC+CGG | 0.504908 | 8_3:+7996036 | Msa1274260:CDS |
| CGTGTACGATATCATGGATT+CGG | 0.506096 | 8_3:+7995489 | Msa1274260:CDS |
| AAATAAACATACAGAGTCAA+AGG | 0.511141 | 8_3:+7991741 | Msa1274260:CDS |
| AACTACAGAGTTCTATGCAC+AGG | 0.512186 | 8_3:+7994180 | Msa1274260:CDS |
| GGCATGCAATCGCGGAATTG+CGG | 0.515020 | 8_3:-7990701 | None:intergenic |
| AAGAATTTACAATGATGTTG+GGG | 0.515608 | 8_3:+7990953 | Msa1274260:CDS |
| TCACTTTGCTTTATCACCTG+AGG | 0.516843 | 8_3:+7991765 | Msa1274260:CDS |
| TTGGGTTTCAGGTGCAGCAG+TGG | 0.521043 | 8_3:+7991713 | Msa1274260:intron |
| TCGGTAAGGATGAAGATGAA+TGG | 0.521822 | 8_3:+7995508 | Msa1274260:CDS |
| CAAGAAATACAGTTCCCTAA+AGG | 0.523819 | 8_3:-7996358 | None:intergenic |
| ATGGTAAAACTTCTTTATCG+TGG | 0.524321 | 8_3:+7991596 | Msa1274260:CDS |
| AAAAGCTCTCCAAAACCAAA+AGG | 0.532507 | 8_3:+7991841 | Msa1274260:CDS |
| TTTGGCAGGAAGAAGTTCGT+TGG | 0.535920 | 8_3:+7996204 | Msa1274260:intron |
| TTCGCTATGGGGTTCATGGT+AGG | 0.542458 | 8_3:-7996284 | None:intergenic |
| CTCTGAAGCTTCCAACGGGA+TGG | 0.544158 | 8_3:-7995562 | None:intergenic |
| GAACCCCATAGCGAACTTGT+GGG | 0.545514 | 8_3:+7996292 | Msa1274260:CDS |
| TGGTAAAACTTCTTTATCGT+GGG | 0.546016 | 8_3:+7991597 | Msa1274260:CDS |
| TTCAGAGTGTCACAAGGTGA+AGG | 0.548383 | 8_3:+7995578 | Msa1274260:CDS |
| AGTCATGTGTATCCGTTGCA+AGG | 0.553166 | 8_3:+7996439 | Msa1274260:three_prime_UTR |
| TATCTATAAAAGACAATGCA+TGG | 0.556904 | 8_3:+7993822 | Msa1274260:CDS |
| AATAAACATACAGAGTCAAA+GGG | 0.557520 | 8_3:+7991742 | Msa1274260:CDS |
| TACAATAGCATCACAATAGA+GGG | 0.559629 | 8_3:-7995976 | None:intergenic |
| TGAACCCCATAGCGAACTTG+TGG | 0.569394 | 8_3:+7996291 | Msa1274260:CDS |
| GGCAACTGAACTCAACTGCT+CGG | 0.573992 | 8_3:+7990650 | Msa1274260:five_prime_UTR |
| TCAAAATCTTCTTATTCACA+TGG | 0.579129 | 8_3:-7996388 | None:intergenic |
| AGATCACCTCAGACTTGTCA+TGG | 0.581330 | 8_3:-7996064 | None:intergenic |
| CGTTGCAAGGGATCTCTATG+AGG | 0.581631 | 8_3:+7996452 | Msa1274260:three_prime_UTR |
| ACGATATCATGGATTCGGTA+AGG | 0.582236 | 8_3:+7995494 | Msa1274260:CDS |
| GTCAGAATTAGCATTTGAAG+CGG | 0.595947 | 8_3:+7993799 | Msa1274260:CDS |
| TGACACTCTGAAGCTTCCAA+CGG | 0.596601 | 8_3:-7995567 | None:intergenic |
| GTCATGTGTATCCGTTGCAA+GGG | 0.599986 | 8_3:+7996440 | Msa1274260:three_prime_UTR |
| TCCTAAGCTCTCTTTAGACG+AGG | 0.605342 | 8_3:+7990814 | Msa1274260:CDS |
| TGTATTGAAAATCCAGAGGA+GGG | 0.612784 | 8_3:+7995995 | Msa1274260:CDS |
| GAGTGTCACAAGGTGAAGGA+AGG | 0.613478 | 8_3:+7995582 | Msa1274260:CDS |
| TTGTATTGAAAATCCAGAGG+AGG | 0.615133 | 8_3:+7995994 | Msa1274260:CDS |
| TGCCTGAAAGATCAACAACT+AGG | 0.616326 | 8_3:-7991795 | None:intergenic |
| GCGACAGAGATCCATCCCGT+TGG | 0.618217 | 8_3:+7995551 | Msa1274260:CDS |
| ATCCCCACAAGTTCGCTATG+GGG | 0.619916 | 8_3:-7996295 | None:intergenic |
| CTCATAGAGATCCCTTGCAA+CGG | 0.623038 | 8_3:-7996451 | None:intergenic |
| ACTTGATCCCAATTTCTGCA+AGG | 0.623250 | 8_3:+7990983 | Msa1274260:CDS |
| AGCTCTTCATCAAACAGTGA+TGG | 0.633505 | 8_3:+7991577 | Msa1274260:intron |
| ACTACAGAGTTCTATGCACA+GGG | 0.642918 | 8_3:+7994181 | Msa1274260:CDS |
| GCCAACACAAGAAGAATCTG+AGG | 0.648905 | 8_3:+7996244 | Msa1274260:CDS |
| ACTTTGCTTTATCACCTGAG+GGG | 0.653399 | 8_3:+7991767 | Msa1274260:CDS |
| AGAATTTACAATGATGTTGG+GGG | 0.657260 | 8_3:+7990954 | Msa1274260:CDS |
| CTCAACTGCTCGGAAATCGG+CGG | 0.661784 | 8_3:+7990660 | Msa1274260:five_prime_UTR |
| AACCCCATAGCGAACTTGTG+GGG | 0.664375 | 8_3:+7996293 | Msa1274260:CDS |
| GGAAGCTTCAGAGTGTCACA+AGG | 0.669493 | 8_3:+7995572 | Msa1274260:CDS |
| ATGGATTAATGTGAAATATG+GGG | 0.705458 | 8_3:+7995527 | Msa1274260:CDS |
| TGGTAGGTTCTAATTCAAAG+GGG | 0.708779 | 8_3:-7996268 | None:intergenic |
| CTATTGTATTGAAAATCCAG+AGG | 0.723013 | 8_3:+7995991 | Msa1274260:CDS |
| CTACAGAGTTCTATGCACAG+GGG | 0.821056 | 8_3:+7994182 | Msa1274260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATCTTTTTTTTTAACA+AGG | - | chr8_3:7992548-7992567 | None:intergenic | 10.0% |
| !!! | ATATTATTATTATTTTCTTC+AGG | - | chr8_3:7993022-7993041 | None:intergenic | 10.0% |
| !! | TTTATGTAAGTAAAATAAAA+AGG | - | chr8_3:7995644-7995663 | None:intergenic | 10.0% |
| !! | AATAAAATTACAAAGTTAAG+TGG | + | chr8_3:7990629-7990648 | Msa1274260:five_prime_UTR | 15.0% |
| !! | AAAACAAAATAAATTCAAAC+CGG | - | chr8_3:7991409-7991428 | None:intergenic | 15.0% |
| !! | TTATCTTGATGTTTATATAT+CGG | - | chr8_3:7992520-7992539 | None:intergenic | 15.0% |
| !!! | ATATATATATTTGCTAACTT+AGG | + | chr8_3:7992847-7992866 | Msa1274260:intron | 15.0% |
| !!! | TATTATTGGTATTTCTTTTT+TGG | - | chr8_3:7993049-7993068 | None:intergenic | 15.0% |
| !!! | GAGATATTTTAATTATATTG+TGG | - | chr8_3:7993389-7993408 | None:intergenic | 15.0% |
| !! | TTGTATTATTGAATAAGAAA+AGG | - | chr8_3:7993674-7993693 | None:intergenic | 15.0% |
| !! | ACAAATAATGATGAAACAAA+GGG | - | chr8_3:7990917-7990936 | None:intergenic | 20.0% |
| !! | TACAAATAATGATGAAACAA+AGG | - | chr8_3:7990918-7990937 | None:intergenic | 20.0% |
| !! | AAAGAATTTACAATGATGTT+GGG | + | chr8_3:7990952-7990971 | Msa1274260:CDS | 20.0% |
| !!! | TTAGGTGAATTCAATTTTTT+CGG | + | chr8_3:7991021-7991040 | Msa1274260:intron | 20.0% |
| !!! | ATAAGTTTGTTTCATAATTC+CGG | - | chr8_3:7991373-7991392 | None:intergenic | 20.0% |
| !! | ACTTATAGATTATACAAAAC+CGG | + | chr8_3:7991387-7991406 | Msa1274260:intron | 20.0% |
| !! | AAATAATAAACGTAACACAA+AGG | - | chr8_3:7991519-7991538 | None:intergenic | 20.0% |
| !!! | TTTATTTTGTTGTCATTACT+AGG | + | chr8_3:7991975-7991994 | Msa1274260:intron | 20.0% |
| !!! | TATTTTCTTGAAATTGAAGT+TGG | - | chr8_3:7992379-7992398 | None:intergenic | 20.0% |
| !!! | TTTTAAATGTTCCAAATCTT+TGG | + | chr8_3:7992399-7992418 | Msa1274260:intron | 20.0% |
| !!! | CACAATATTTCTTTTATACA+CGG | + | chr8_3:7992792-7992811 | Msa1274260:intron | 20.0% |
| !! | ACAACTGTGATAATTATTAT+TGG | - | chr8_3:7993063-7993082 | None:intergenic | 20.0% |
| !! | TGATTATCATTTATTAAGTC+TGG | - | chr8_3:7993144-7993163 | None:intergenic | 20.0% |
| !! | AAATATCTCATCATAATGTT+AGG | + | chr8_3:7993400-7993419 | Msa1274260:intron | 20.0% |
| !!! | TGTGACATTTTTAAACATTT+TGG | + | chr8_3:7993904-7993923 | Msa1274260:intron | 20.0% |
| !! | ACTAAATAACTAACCAAAAA+AGG | - | chr8_3:7994096-7994115 | None:intergenic | 20.0% |
| !!! | GAAAATAAAAAAGCATCAAA+AGG | - | chr8_3:7994129-7994148 | None:intergenic | 20.0% |
| !!! | CTTTTTTATTTTCCAATTAC+AGG | + | chr8_3:7994136-7994155 | Msa1274260:intron | 20.0% |
| !!! | GTAAGATTCTTTTATATCTT+TGG | + | chr8_3:7994210-7994229 | Msa1274260:intron | 20.0% |
| !! | TATTTGAAGAAAAATAAGGA+AGG | - | chr8_3:7994310-7994329 | None:intergenic | 20.0% |
| !! | AAAGAATCAAATACAAAAAC+AGG | - | chr8_3:7994333-7994352 | None:intergenic | 20.0% |
| !! | TAGTTTCTATTGCTTAAAAA+AGG | - | chr8_3:7994496-7994515 | None:intergenic | 20.0% |
| !! | CAAATTGTACTATGTAAAAA+TGG | + | chr8_3:7994679-7994698 | Msa1274260:intron | 20.0% |
| !! | TCTTATACATAGTACTATTT+GGG | - | chr8_3:7994786-7994805 | None:intergenic | 20.0% |
| !!! | TATATGGATTTCTAATGTTT+TGG | - | chr8_3:7994835-7994854 | None:intergenic | 20.0% |
| !! | GTGGAAATGAAAATAAAAAT+CGG | + | chr8_3:7995143-7995162 | Msa1274260:intron | 20.0% |
| !!! | TTAAAAATCATTTTGGAACA+GGG | - | chr8_3:7995232-7995251 | None:intergenic | 20.0% |
| !!! | ATTAAAAATCATTTTGGAAC+AGG | - | chr8_3:7995233-7995252 | None:intergenic | 20.0% |
| !!! | CATGGTATTAAAAATCATTT+TGG | - | chr8_3:7995239-7995258 | None:intergenic | 20.0% |
| !!! | AAGTTTCCATTATTTTTCAA+TGG | - | chr8_3:7995303-7995322 | None:intergenic | 20.0% |
| !! | GTTCATAAGTATACAAATAT+AGG | - | chr8_3:7995350-7995369 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGGTATATTAT+GGG | + | chr8_3:7995413-7995432 | Msa1274260:intron | 20.0% |
| !!! | AATGGATTAATGTGAAATAT+GGG | + | chr8_3:7995526-7995545 | Msa1274260:CDS | 20.0% |
| !! | AAGAAAAAAAAACTACGTTT+GGG | - | chr8_3:7995869-7995888 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAACTACGTT+TGG | - | chr8_3:7995870-7995889 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTCACAAGATAC+TGG | + | chr8_3:7996575-7996594 | Msa1274260:three_prime_UTR | 20.0% |
| ! | AAGAAACAGAAGATTGAAAA+AGG | - | chr8_3:7990860-7990879 | None:intergenic | 25.0% |
| ! | TCATCATTATTTGTAGATAC+TGG | + | chr8_3:7990923-7990942 | Msa1274260:intron | 25.0% |
| ! | TTATTTGTAGATACTGGAAT+TGG | + | chr8_3:7990929-7990948 | Msa1274260:intron | 25.0% |
| ! | GAAAGAATTTACAATGATGT+TGG | + | chr8_3:7990951-7990970 | Msa1274260:CDS | 25.0% |
| ! | AAGAATTTACAATGATGTTG+GGG | + | chr8_3:7990953-7990972 | Msa1274260:CDS | 25.0% |
| ! | TCTACTGAAATAAGTACTTA+TGG | + | chr8_3:7991072-7991091 | Msa1274260:intron | 25.0% |
| ! | GAAATAAGCTGAAAATAAAG+AGG | + | chr8_3:7991279-7991298 | Msa1274260:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr8_3:7991492-7991511 | Msa1274260:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr8_3:7991493-7991512 | Msa1274260:intron | 25.0% |
| !! | TTGACTCTGTATGTTTATTT+TGG | - | chr8_3:7991741-7991760 | None:intergenic | 25.0% |
| ! | AAATAAACATACAGAGTCAA+AGG | + | chr8_3:7991741-7991760 | Msa1274260:CDS | 25.0% |
| ! | AATAAACATACAGAGTCAAA+GGG | + | chr8_3:7991742-7991761 | Msa1274260:CDS | 25.0% |
| ! | TTAAAAGCTAAGAGCAAAAA+AGG | - | chr8_3:7991871-7991890 | None:intergenic | 25.0% |
| ! | TGTTGCTATGAATTCAAAAA+AGG | + | chr8_3:7991891-7991910 | Msa1274260:intron | 25.0% |
| ! | ATGACACACTTTATCTTTAT+AGG | + | chr8_3:7992152-7992171 | Msa1274260:intron | 25.0% |
| ! | ACATTTCTATACCAAAGATT+TGG | - | chr8_3:7992413-7992432 | None:intergenic | 25.0% |
| !! | TTCAATTTCTTAAGAAGCAT+CGG | - | chr8_3:7992441-7992460 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAATACCTCAA+TGG | + | chr8_3:7992449-7992468 | Msa1274260:intron | 25.0% |
| !! | ACATAGATTTAGCCTATTTT+CGG | + | chr8_3:7993090-7993109 | Msa1274260:intron | 25.0% |
| !! | ATCATTTTCTATGTTAGTCA+TGG | + | chr8_3:7993576-7993595 | Msa1274260:intron | 25.0% |
| !! | TCATTTTCTATGTTAGTCAT+GGG | + | chr8_3:7993577-7993596 | Msa1274260:intron | 25.0% |
| ! | TAAATAGCAGAAAAAAGAAG+GGG | - | chr8_3:7993722-7993741 | None:intergenic | 25.0% |
| ! | GTAAATAGCAGAAAAAAGAA+GGG | - | chr8_3:7993723-7993742 | None:intergenic | 25.0% |
| ! | AGTAAATAGCAGAAAAAAGA+AGG | - | chr8_3:7993724-7993743 | None:intergenic | 25.0% |
| ! | TATCTATAAAAGACAATGCA+TGG | + | chr8_3:7993822-7993841 | Msa1274260:CDS | 25.0% |
| ! | AACTAACCAAAAAAGGTTAA+TGG | - | chr8_3:7994089-7994108 | None:intergenic | 25.0% |
| ! | CAGGTATTTGAAGAAAAATA+AGG | - | chr8_3:7994314-7994333 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTGCTTAAAACA+TGG | + | chr8_3:7994351-7994370 | Msa1274260:intron | 25.0% |
| ! | TTTCATTTGAATTGCATGTT+AGG | + | chr8_3:7994402-7994421 | Msa1274260:intron | 25.0% |
| ! | TTATACATAGTACTATTTGG+GGG | - | chr8_3:7994784-7994803 | None:intergenic | 25.0% |
| ! | CTTATACATAGTACTATTTG+GGG | - | chr8_3:7994785-7994804 | None:intergenic | 25.0% |
| ! | CTCTTATACATAGTACTATT+TGG | - | chr8_3:7994787-7994806 | None:intergenic | 25.0% |
| ! | TTCAGAAAAATCTCATTGTT+GGG | + | chr8_3:7994859-7994878 | Msa1274260:intron | 25.0% |
| !! | GGTATCATGCTTTTATAATA+AGG | - | chr8_3:7995014-7995033 | None:intergenic | 25.0% |
| ! | TAAATTCACAAGTTATGTGA+TGG | + | chr8_3:7995178-7995197 | Msa1274260:intron | 25.0% |
| ! | TGGCAATTATTTAGATTACA+TGG | - | chr8_3:7995257-7995276 | None:intergenic | 25.0% |
| !!! | TTCCATTATTTTTCAATGGA+CGG | - | chr8_3:7995299-7995318 | None:intergenic | 25.0% |
| !! | AAAATTATTGCTGTTCTTAG+AGG | + | chr8_3:7995390-7995409 | Msa1274260:intron | 25.0% |
| !! | GATGTTCTTTTGGTATATTA+TGG | + | chr8_3:7995412-7995431 | Msa1274260:intron | 25.0% |
| !!! | GAATGGATTAATGTGAAATA+TGG | + | chr8_3:7995525-7995544 | Msa1274260:CDS | 25.0% |
| !! | ATGGATTAATGTGAAATATG+GGG | + | chr8_3:7995527-7995546 | Msa1274260:CDS | 25.0% |
| ! | ACCTGTGCAAAATTAATAAA+GGG | - | chr8_3:7995942-7995961 | None:intergenic | 25.0% |
| ! | TACCTGTGCAAAATTAATAA+AGG | - | chr8_3:7995943-7995962 | None:intergenic | 25.0% |
| !! | GTTTTTGTTAAAAAGAAGCA+AGG | - | chr8_3:7996097-7996116 | None:intergenic | 25.0% |
| !! | GGGAAGTACAAAATAAAAAT+TGG | - | chr8_3:7996330-7996349 | None:intergenic | 25.0% |
| ! | TCAAAATCTTCTTATTCACA+TGG | - | chr8_3:7996391-7996410 | None:intergenic | 25.0% |
| TGAAAAAGGTGAAATGAGAA+TGG | - | chr8_3:7990846-7990865 | None:intergenic | 30.0% | |
| AGAATTTACAATGATGTTGG+GGG | + | chr8_3:7990954-7990973 | Msa1274260:CDS | 30.0% | |
| ! | AGGATATTGCTGCAAATTTT+AGG | + | chr8_3:7991003-7991022 | Msa1274260:CDS | 30.0% |
| !! | AAGCTATTTTGAAGAGCTTA+TGG | + | chr8_3:7991257-7991276 | Msa1274260:intron | 30.0% |
| ATGAATATGTCAATCCAAAC+AGG | - | chr8_3:7991317-7991336 | None:intergenic | 30.0% | |
| !! | GATTATTTCATTTAGCTCTC+CGG | + | chr8_3:7991351-7991370 | Msa1274260:intron | 30.0% |
| ATGGTAAAACTTCTTTATCG+TGG | + | chr8_3:7991596-7991615 | Msa1274260:CDS | 30.0% | |
| TGGTAAAACTTCTTTATCGT+GGG | + | chr8_3:7991597-7991616 | Msa1274260:CDS | 30.0% | |
| ! | TCTGAATCTCTGATACATTT+TGG | + | chr8_3:7991648-7991667 | Msa1274260:intron | 30.0% |
| !!! | TGATACATTTTGGAGTGTAT+GGG | + | chr8_3:7991658-7991677 | Msa1274260:intron | 30.0% |
| !!! | AAAGGAAAACCTTTTGGTTT+TGG | - | chr8_3:7991853-7991872 | None:intergenic | 30.0% |
| ! | AGCAAAAAAGGAAAACCTTT+TGG | - | chr8_3:7991859-7991878 | None:intergenic | 30.0% |
| GCTATGAATTCAAAAAAGGA+AGG | + | chr8_3:7991895-7991914 | Msa1274260:intron | 30.0% | |
| TTTGTTAGTTCAGACAAAGA+TGG | + | chr8_3:7992029-7992048 | Msa1274260:intron | 30.0% | |
| AGAAAATGAGAGAGAATGAA+AGG | + | chr8_3:7992090-7992109 | Msa1274260:intron | 30.0% | |
| ! | AAGCTGCATTTAAAACTTAC+TGG | - | chr8_3:7992194-7992213 | None:intergenic | 30.0% |
| TATAAGTAAGTATCTCACAG+AGG | - | chr8_3:7992311-7992330 | None:intergenic | 30.0% | |
| ! | AAATTGAAGTTGGTCAATCA+AGG | - | chr8_3:7992369-7992388 | None:intergenic | 30.0% |
| TAGGCCAACAAAAAATATGA+AGG | + | chr8_3:7992866-7992885 | Msa1274260:intron | 30.0% | |
| !!! | TGGACCTTCATATTTTTTGT+TGG | - | chr8_3:7992873-7992892 | None:intergenic | 30.0% |
| TAGACCAACAAAAAACATGA+AGG | - | chr8_3:7992926-7992945 | None:intergenic | 30.0% | |
| ! | CAACAGATTTTCAATAACAC+TGG | - | chr8_3:7993170-7993189 | None:intergenic | 30.0% |
| ! | CAGTGTTATTGAAAATCTGT+TGG | + | chr8_3:7993168-7993187 | Msa1274260:intron | 30.0% |
| TGTTATTGAAAATCTGTTGG+TGG | + | chr8_3:7993171-7993190 | Msa1274260:intron | 30.0% | |
| TGCCTAAATTGCAGAAATTT+GGG | + | chr8_3:7993278-7993297 | Msa1274260:intron | 30.0% | |
| AACATAAATTTCCACACTGT+GGG | - | chr8_3:7993454-7993473 | None:intergenic | 30.0% | |
| TAACATAAATTTCCACACTG+TGG | - | chr8_3:7993455-7993474 | None:intergenic | 30.0% | |
| ACAGTGTGGAAATTTATGTT+AGG | + | chr8_3:7993454-7993473 | Msa1274260:intron | 30.0% | |
| GCTATTTGTGTAAGAGAATT+AGG | + | chr8_3:7993510-7993529 | Msa1274260:intron | 30.0% | |
| AAATAGCAGAAAAAAGAAGG+GGG | - | chr8_3:7993721-7993740 | None:intergenic | 30.0% | |
| ATTTACTCTTCTTCGATTTC+TGG | + | chr8_3:7993737-7993756 | Msa1274260:intron | 30.0% | |
| !!! | TCACAACCATTAACCTTTTT+TGG | + | chr8_3:7994080-7994099 | Msa1274260:intron | 30.0% |
| ! | TTTTGTCTCTTTCAACATAG+TGG | + | chr8_3:7994447-7994466 | Msa1274260:intron | 30.0% |
| TTTGTCTCTTTCAACATAGT+GGG | + | chr8_3:7994448-7994467 | Msa1274260:intron | 30.0% | |
| GAAAAGTGAATGTCAAACTT+TGG | + | chr8_3:7994522-7994541 | Msa1274260:intron | 30.0% | |
| CGCTTGATATGAAAAATATC+AGG | + | chr8_3:7994583-7994602 | Msa1274260:intron | 30.0% | |
| AACTCGCTATGATAGAAAAT+TGG | + | chr8_3:7994616-7994635 | Msa1274260:intron | 30.0% | |
| !!! | TCTAATGTTTTGGTGCTTTT+GGG | - | chr8_3:7994825-7994844 | None:intergenic | 30.0% |
| !!! | TTCTAATGTTTTGGTGCTTT+TGG | - | chr8_3:7994826-7994845 | None:intergenic | 30.0% |
| !!! | GATTTTTCTGAAGTGCTATA+TGG | - | chr8_3:7994851-7994870 | None:intergenic | 30.0% |
| CTTCAGAAAAATCTCATTGT+TGG | + | chr8_3:7994858-7994877 | Msa1274260:intron | 30.0% | |
| GTAGAACTTACGTTATATGT+GGG | + | chr8_3:7994913-7994932 | Msa1274260:intron | 30.0% | |
| ACTATTTAGCACAAGCAATT+GGG | - | chr8_3:7994948-7994967 | None:intergenic | 30.0% | |
| GAAATATCACAAACAATAGC+TGG | - | chr8_3:7995277-7995296 | None:intergenic | 30.0% | |
| TTCCGTCCATTGAAAAATAA+TGG | + | chr8_3:7995294-7995313 | Msa1274260:intron | 30.0% | |
| ! | AACAGCAATAATTTTACAGC+AGG | - | chr8_3:7995385-7995404 | None:intergenic | 30.0% |
| AGTTAATGTATGTTGTGATG+TGG | + | chr8_3:7995447-7995466 | Msa1274260:intron | 30.0% | |
| TTGTACTATGTTTCCATGTA+AGG | + | chr8_3:7995610-7995629 | Msa1274260:intron | 30.0% | |
| TGTACTATGTTTCCATGTAA+GGG | + | chr8_3:7995611-7995630 | Msa1274260:intron | 30.0% | |
| TAAACATAATGTGTATCCAG+TGG | + | chr8_3:7995660-7995679 | Msa1274260:intron | 30.0% | |
| TTCATTTAACACACGTTTGA+TGG | + | chr8_3:7995772-7995791 | Msa1274260:intron | 30.0% | |
| TCATTTAACACACGTTTGAT+GGG | + | chr8_3:7995773-7995792 | Msa1274260:intron | 30.0% | |
| !! | AAAAGAAGTATCAACGGTTA+GGG | - | chr8_3:7995917-7995936 | None:intergenic | 30.0% |
| ! | ACCCTTTATTAATTTTGCAC+AGG | + | chr8_3:7995938-7995957 | Msa1274260:intron | 30.0% |
| TACAATAGCATCACAATAGA+GGG | - | chr8_3:7995979-7995998 | None:intergenic | 30.0% | |
| ATACAATAGCATCACAATAG+AGG | - | chr8_3:7995980-7995999 | None:intergenic | 30.0% | |
| CTATTGTATTGAAAATCCAG+AGG | + | chr8_3:7995991-7996010 | Msa1274260:CDS | 30.0% | |
| ! | TATCATCTTTGGTAGTTGTT+AGG | + | chr8_3:7996140-7996159 | Msa1274260:intron | 30.0% |
| ! | ATGGTAGGTTCTAATTCAAA+GGG | - | chr8_3:7996272-7996291 | None:intergenic | 30.0% |
| !!! | ACTTCCCTTTTTTTTCCTTT+AGG | + | chr8_3:7996343-7996362 | Msa1274260:three_prime_UTR | 30.0% |
| !!! | CTTCCCTTTTTTTTCCTTTA+GGG | + | chr8_3:7996344-7996363 | Msa1274260:three_prime_UTR | 30.0% |
| GTTCCCTAAAGGAAAAAAAA+GGG | - | chr8_3:7996350-7996369 | None:intergenic | 30.0% | |
| AGTTCCCTAAAGGAAAAAAA+AGG | - | chr8_3:7996351-7996370 | None:intergenic | 30.0% | |
| TGACTTGATTCAAATTAGTC+AGG | - | chr8_3:7996424-7996443 | None:intergenic | 30.0% | |
| CTATTGAGTAAAGATCTTCT+TGG | - | chr8_3:7996493-7996512 | None:intergenic | 30.0% | |
| ATAAGTATAGTCGTGATTGT+AGG | + | chr8_3:7996547-7996566 | Msa1274260:three_prime_UTR | 30.0% | |
| GCAATATCCTTGCAGAAATT+GGG | - | chr8_3:7990993-7991012 | None:intergenic | 35.0% | |
| AGCAATATCCTTGCAGAAAT+TGG | - | chr8_3:7990994-7991013 | None:intergenic | 35.0% | |
| CAGAAGAGCTTAGTGAAATA+AGG | - | chr8_3:7991119-7991138 | None:intergenic | 35.0% | |
| CTTATTTCACTAAGCTCTTC+TGG | + | chr8_3:7991117-7991136 | Msa1274260:intron | 35.0% | |
| TATGTCAATCCAAACAGGAA+CGG | - | chr8_3:7991312-7991331 | None:intergenic | 35.0% | |
| GCTGCAAAATCAAAACAAGT+AGG | - | chr8_3:7991560-7991579 | None:intergenic | 35.0% | |
| !!! | CTGATACATTTTGGAGTGTA+TGG | + | chr8_3:7991657-7991676 | Msa1274260:intron | 35.0% |
| !! | TAATGATACCGCTGTTGTTT+TGG | + | chr8_3:7991694-7991713 | Msa1274260:intron | 35.0% |
| !!! | AATGATACCGCTGTTGTTTT+GGG | + | chr8_3:7991695-7991714 | Msa1274260:intron | 35.0% |
| AACCTAGTTGTTGATCTTTC+AGG | + | chr8_3:7991793-7991812 | Msa1274260:CDS | 35.0% | |
| AGGCAAATCTTCTTCGATAA+AGG | + | chr8_3:7991813-7991832 | Msa1274260:CDS | 35.0% | |
| GGCAAATCTTCTTCGATAAA+GGG | + | chr8_3:7991814-7991833 | Msa1274260:CDS | 35.0% | |
| AAAAGCTCTCCAAAACCAAA+AGG | + | chr8_3:7991841-7991860 | Msa1274260:CDS | 35.0% | |
| GGAAGAAAGAACTACATTAC+TGG | + | chr8_3:7991916-7991935 | Msa1274260:intron | 35.0% | |
| CTTTATCTTTATAGGCACCA+CGG | + | chr8_3:7992160-7992179 | Msa1274260:intron | 35.0% | |
| TTACTCTATAACCTACTAGC+TGG | + | chr8_3:7992233-7992252 | Msa1274260:intron | 35.0% | |
| TTGTCTCACTTTAGATTCGA+CGG | - | chr8_3:7992657-7992676 | None:intergenic | 35.0% | |
| ACATGAAGGTCCAAATGAAA+AGG | - | chr8_3:7992912-7992931 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | + | chr8_3:7992919-7992938 | Msa1274260:intron | 35.0% |
| GGTCTAAGTTAGCAAATTGT+AGG | + | chr8_3:7992940-7992959 | Msa1274260:intron | 35.0% | |
| GTTAGCAAATTGTAGGTCAT+AGG | + | chr8_3:7992947-7992966 | Msa1274260:intron | 35.0% | |
| ! | CTCAATTGGTTTCCGAAAAT+AGG | - | chr8_3:7993105-7993124 | None:intergenic | 35.0% |
| ! | ATTTTCGGAAACCAATTGAG+TGG | + | chr8_3:7993105-7993124 | Msa1274260:intron | 35.0% |
| TGCTTGTAATTCCACTCAAT+TGG | - | chr8_3:7993119-7993138 | None:intergenic | 35.0% | |
| !! | TGAAAATCTGTTGGTGGATT+TGG | + | chr8_3:7993177-7993196 | Msa1274260:intron | 35.0% |
| !! | GAAAATCTGTTGGTGGATTT+GGG | + | chr8_3:7993178-7993197 | Msa1274260:intron | 35.0% |
| CTGCCTAAATTGCAGAAATT+TGG | + | chr8_3:7993277-7993296 | Msa1274260:intron | 35.0% | |
| GACCCAAATTTCTGCAATTT+AGG | - | chr8_3:7993283-7993302 | None:intergenic | 35.0% | |
| TAATGTTAGGATCTCAACTG+TGG | + | chr8_3:7993413-7993432 | Msa1274260:intron | 35.0% | |
| AATGTTAGGATCTCAACTGT+GGG | + | chr8_3:7993414-7993433 | Msa1274260:intron | 35.0% | |
| ATGTTAGGAAAATGCTGATG+TGG | + | chr8_3:7993469-7993488 | Msa1274260:intron | 35.0% | |
| GTCAGAATTAGCATTTGAAG+CGG | + | chr8_3:7993799-7993818 | Msa1274260:CDS | 35.0% | |
| ATAAAAGACAATGCATGGTG+AGG | + | chr8_3:7993827-7993846 | Msa1274260:intron | 35.0% | |
| !!! | AATCTTTTTGGAGTGAAGAG+TGG | - | chr8_3:7994016-7994035 | None:intergenic | 35.0% |
| AAAGGTTAATGGTTGTGAAG+AGG | - | chr8_3:7994078-7994097 | None:intergenic | 35.0% | |
| !! | AAAAATAAGGAAGGCATTGC+AGG | - | chr8_3:7994301-7994320 | None:intergenic | 35.0% |
| TGTTTGTGCTTAAAACATGG+TGG | + | chr8_3:7994354-7994373 | Msa1274260:intron | 35.0% | |
| TGACGAAGCAAAGAATAATG+TGG | + | chr8_3:7994555-7994574 | Msa1274260:intron | 35.0% | |
| !! | TTTAGAATGCCTTTTTCTCG+TGG | - | chr8_3:7994753-7994772 | None:intergenic | 35.0% |
| GGTAGAACTTACGTTATATG+TGG | + | chr8_3:7994912-7994931 | Msa1274260:intron | 35.0% | |
| CACTATTTAGCACAAGCAAT+TGG | - | chr8_3:7994949-7994968 | None:intergenic | 35.0% | |
| GTAGAAAAGCTCTCTTTCTT+AGG | + | chr8_3:7994978-7994997 | Msa1274260:intron | 35.0% | |
| AGCATGATACCTTCTTCAAA+TGG | + | chr8_3:7995023-7995042 | Msa1274260:intron | 35.0% | |
| GCATGATACCTTCTTCAAAT+GGG | + | chr8_3:7995024-7995043 | Msa1274260:intron | 35.0% | |
| CCACAACTTAATGTAAGTCT+GGG | - | chr8_3:7995127-7995146 | None:intergenic | 35.0% | |
| TCCACAACTTAATGTAAGTC+TGG | - | chr8_3:7995128-7995147 | None:intergenic | 35.0% | |
| ! | GTTCTTAGAGGATGTTCTTT+TGG | + | chr8_3:7995402-7995421 | Msa1274260:intron | 35.0% |
| GAATGAAGTGTACACAAACA+CGG | - | chr8_3:7995702-7995721 | None:intergenic | 35.0% | |
| GTCTTGTAATGTGTGTGAAA+AGG | - | chr8_3:7995724-7995743 | None:intergenic | 35.0% | |
| AACGTGTGTTAAATGAACAC+AGG | - | chr8_3:7995769-7995788 | None:intergenic | 35.0% | |
| CATTTAACACACGTTTGATG+GGG | + | chr8_3:7995774-7995793 | Msa1274260:intron | 35.0% | |
| ATTTAACACACGTTTGATGG+GGG | + | chr8_3:7995775-7995794 | Msa1274260:intron | 35.0% | |
| TTGATATGTTGGCAACAAGT+CGG | - | chr8_3:7995846-7995865 | None:intergenic | 35.0% | |
| ATCAACGGTTAGGGAATTTA+TGG | - | chr8_3:7995908-7995927 | None:intergenic | 35.0% | |
| !! | CAAAAGAAGTATCAACGGTT+AGG | - | chr8_3:7995918-7995937 | None:intergenic | 35.0% |
| !! | AGGGTCAAAAGAAGTATCAA+CGG | - | chr8_3:7995923-7995942 | None:intergenic | 35.0% |
| TTGTATTGAAAATCCAGAGG+AGG | + | chr8_3:7995994-7996013 | Msa1274260:CDS | 35.0% | |
| TGTATTGAAAATCCAGAGGA+GGG | + | chr8_3:7995995-7996014 | Msa1274260:CDS | 35.0% | |
| TAGCATGAATGCTGATGATA+TGG | - | chr8_3:7996122-7996141 | None:intergenic | 35.0% | |
| AGCATTCATGCTATCATCTT+TGG | + | chr8_3:7996129-7996148 | Msa1274260:intron | 35.0% | |
| GTAGTTGTTAGGTAAATCCT+CGG | + | chr8_3:7996151-7996170 | Msa1274260:intron | 35.0% | |
| ACACATGAAACATCAGGTAA+AGG | - | chr8_3:7996183-7996202 | None:intergenic | 35.0% | |
| ! | TGGTAGGTTCTAATTCAAAG+GGG | - | chr8_3:7996271-7996290 | None:intergenic | 35.0% |
| ! | CATGGTAGGTTCTAATTCAA+AGG | - | chr8_3:7996273-7996292 | None:intergenic | 35.0% |
| CAAGAAATACAGTTCCCTAA+AGG | - | chr8_3:7996361-7996380 | None:intergenic | 35.0% | |
| ACTTGATCCCAATTTCTGCA+AGG | + | chr8_3:7990983-7991002 | Msa1274260:CDS | 40.0% | |
| AGCTCTTCATCAAACAGTGA+TGG | + | chr8_3:7991577-7991596 | Msa1274260:intron | 40.0% | |
| AACTTCTTTATCGTGGGAAC+AGG | + | chr8_3:7991603-7991622 | Msa1274260:CDS | 40.0% | |
| TCACTTTGCTTTATCACCTG+AGG | + | chr8_3:7991765-7991784 | Msa1274260:CDS | 40.0% | |
| CACTTTGCTTTATCACCTGA+GGG | + | chr8_3:7991766-7991785 | Msa1274260:CDS | 40.0% | |
| ACTTTGCTTTATCACCTGAG+GGG | + | chr8_3:7991767-7991786 | Msa1274260:CDS | 40.0% | |
| TGCCTGAAAGATCAACAACT+AGG | - | chr8_3:7991798-7991817 | None:intergenic | 40.0% | |
| TACTAGGCATTCACTTGCTT+TGG | + | chr8_3:7991991-7992010 | Msa1274260:intron | 40.0% | |
| ACTAGGCATTCACTTGCTTT+GGG | + | chr8_3:7991992-7992011 | Msa1274260:intron | 40.0% | |
| !! | TTCACTTGCTTTGGGGTAAA+TGG | + | chr8_3:7992000-7992019 | Msa1274260:intron | 40.0% |
| TTCAGACAAAGATGGTATGC+AGG | + | chr8_3:7992037-7992056 | Msa1274260:intron | 40.0% | |
| GATGGTATGCAGGAAGAAAA+TGG | + | chr8_3:7992047-7992066 | Msa1274260:intron | 40.0% | |
| GATAAAGTGTGTCATGTGCA+TGG | - | chr8_3:7992147-7992166 | None:intergenic | 40.0% | |
| ATATAGATGCACCAGCTAGT+AGG | - | chr8_3:7992247-7992266 | None:intergenic | 40.0% | |
| AAGTATCTCACAGAGGTCTA+AGG | - | chr8_3:7992304-7992323 | None:intergenic | 40.0% | |
| AATCACAAGACTGACCATTG+AGG | - | chr8_3:7992466-7992485 | None:intergenic | 40.0% | |
| CGACAAAGCTGATCATTCAA+TGG | - | chr8_3:7992599-7992618 | None:intergenic | 40.0% | |
| ! | ATCAGCTTTGTCGCAAATTG+TGG | + | chr8_3:7992606-7992625 | Msa1274260:intron | 40.0% |
| AAACCCATACGTATTGAACC+CGG | + | chr8_3:7992731-7992750 | Msa1274260:intron | 40.0% | |
| AGAAATATTGTGTGTCGCAG+TGG | - | chr8_3:7992784-7992803 | None:intergenic | 40.0% | |
| ! | CAAGTGTGCACCTTTTCATT+TGG | + | chr8_3:7992899-7992918 | Msa1274260:intron | 40.0% |
| ! | CTCATTTTGTCTCAACAACC+TGG | - | chr8_3:7992996-7993015 | None:intergenic | 40.0% |
| CAGGTTGTTGAGACAAAATG+AGG | + | chr8_3:7992994-7993013 | Msa1274260:intron | 40.0% | |
| TAAATGGCGGCAAATATTGC+AGG | + | chr8_3:7993215-7993234 | Msa1274260:intron | 40.0% | |
| AAATGGCGGCAAATATTGCA+GGG | + | chr8_3:7993216-7993235 | Msa1274260:intron | 40.0% | |
| !!! | AGTGTTTTGGTGCAACATCA+TGG | - | chr8_3:7993259-7993278 | None:intergenic | 40.0% |
| ! | CTGCAATTTAGGCAGTGTTT+TGG | - | chr8_3:7993272-7993291 | None:intergenic | 40.0% |
| ! | CTGATAAGTGTTGTCTATGG+CGG | - | chr8_3:7993324-7993343 | None:intergenic | 40.0% |
| ! | GTGCTGATAAGTGTTGTCTA+TGG | - | chr8_3:7993327-7993346 | None:intergenic | 40.0% |
| AATCTATCCACAGATCAGCA+CGG | - | chr8_3:7993353-7993372 | None:intergenic | 40.0% | |
| AAATTTCCACACTGTGGGTT+AGG | - | chr8_3:7993449-7993468 | None:intergenic | 40.0% | |
| AGTGATTGAGTAGAGAGAGA+AGG | + | chr8_3:7993539-7993558 | Msa1274260:intron | 40.0% | |
| GTGATTGAGTAGAGAGAGAA+GGG | + | chr8_3:7993540-7993559 | Msa1274260:intron | 40.0% | |
| TGATTGAGTAGAGAGAGAAG+GGG | + | chr8_3:7993541-7993560 | Msa1274260:intron | 40.0% | |
| AAAAAGAAGGGGGAAATCAC+TGG | - | chr8_3:7993711-7993730 | None:intergenic | 40.0% | |
| TACGTGAGAACTATAAGACG+TGG | + | chr8_3:7993929-7993948 | Msa1274260:intron | 40.0% | |
| GAGAACTATAAGACGTGGTA+TGG | + | chr8_3:7993934-7993953 | Msa1274260:intron | 40.0% | |
| AATGGTTGTGAAGAGGAGAT+GGG | - | chr8_3:7994071-7994090 | None:intergenic | 40.0% | |
| TAATGGTTGTGAAGAGGAGA+TGG | - | chr8_3:7994072-7994091 | None:intergenic | 40.0% | |
| TGCAACATCATGCCTGTAAT+TGG | - | chr8_3:7994151-7994170 | None:intergenic | 40.0% | |
| AACTACAGAGTTCTATGCAC+AGG | + | chr8_3:7994180-7994199 | Msa1274260:CDS | 40.0% | |
| ACTACAGAGTTCTATGCACA+GGG | + | chr8_3:7994181-7994200 | Msa1274260:CDS | 40.0% | |
| CTCAAGCTCAAAATCATGCA+TGG | + | chr8_3:7994727-7994746 | Msa1274260:intron | 40.0% | |
| AAGCTCTCTTTCTTAGGCAT+AGG | + | chr8_3:7994984-7995003 | Msa1274260:intron | 40.0% | |
| TGATATGGCCCATTTGAAGA+AGG | - | chr8_3:7995035-7995054 | None:intergenic | 40.0% | |
| ! | CCCAGACTTACATTAAGTTG+TGG | + | chr8_3:7995124-7995143 | Msa1274260:intron | 40.0% |
| GTGATGTGGCACATGATTTA+AGG | + | chr8_3:7995461-7995480 | Msa1274260:intron | 40.0% | |
| GAAGTTCGTGTACGATATCA+TGG | + | chr8_3:7995483-7995502 | Msa1274260:CDS | 40.0% | |
| CGTGTACGATATCATGGATT+CGG | + | chr8_3:7995489-7995508 | Msa1274260:CDS | 40.0% | |
| ! | ACGATATCATGGATTCGGTA+AGG | + | chr8_3:7995494-7995513 | Msa1274260:CDS | 40.0% |
| TCGGTAAGGATGAAGATGAA+TGG | + | chr8_3:7995508-7995527 | Msa1274260:CDS | 40.0% | |
| AAAGGCTAGAATCCCTTACA+TGG | - | chr8_3:7995626-7995645 | None:intergenic | 40.0% | |
| AACACGGCAACAATCATATG+TGG | - | chr8_3:7995686-7995705 | None:intergenic | 40.0% | |
| !! | CTACGTTTGGGTTGATATGT+TGG | - | chr8_3:7995857-7995876 | None:intergenic | 40.0% |
| CAGACTTGTCATGGTAAAAC+CGG | - | chr8_3:7996058-7996077 | None:intergenic | 40.0% | |
| ! | GTTTTACCATGACAAGTCTG+AGG | + | chr8_3:7996058-7996077 | Msa1274260:CDS | 40.0% |
| CCAAAGACACATGAAACATC+AGG | - | chr8_3:7996189-7996208 | None:intergenic | 40.0% | |
| CCTGATGTTTCATGTGTCTT+TGG | + | chr8_3:7996186-7996205 | Msa1274260:intron | 40.0% | |
| ATGTTTCATGTGTCTTTGGC+AGG | + | chr8_3:7996190-7996209 | Msa1274260:intron | 40.0% | |
| ACCTCAGATTCTTCTTGTGT+TGG | - | chr8_3:7996248-7996267 | None:intergenic | 40.0% | |
| GAACTCAACTGCTCGGAAAT+CGG | + | chr8_3:7990657-7990676 | Msa1274260:five_prime_UTR | 45.0% | |
| TCCTAAGCTCTCTTTAGACG+AGG | + | chr8_3:7990814-7990833 | Msa1274260:CDS | 45.0% | |
| ACCTCGTCTAAAGAGAGCTT+AGG | - | chr8_3:7990818-7990837 | None:intergenic | 45.0% | |
| ATCGTGGGAACAGGTTGTTA+AGG | + | chr8_3:7991612-7991631 | Msa1274260:intron | 45.0% | |
| CCTGAAACCCAAAACAACAG+CGG | - | chr8_3:7991705-7991724 | None:intergenic | 45.0% | |
| CTAGGCATTCACTTGCTTTG+GGG | + | chr8_3:7991993-7992012 | Msa1274260:intron | 45.0% | |
| TTATAGGCACCACGGATACA+AGG | + | chr8_3:7992168-7992187 | Msa1274260:intron | 45.0% | |
| ! | GAAGTTGGTCAATCAAGGAC+TGG | - | chr8_3:7992364-7992383 | None:intergenic | 45.0% |
| CTCATGCAATTGAAAGGACC+GGG | - | chr8_3:7992752-7992771 | None:intergenic | 45.0% | |
| CCTCATGCAATTGAAAGGAC+CGG | - | chr8_3:7992753-7992772 | None:intergenic | 45.0% | |
| GGCTACCTCATGCAATTGAA+AGG | - | chr8_3:7992758-7992777 | None:intergenic | 45.0% | |
| TATTGTGTGTCGCAGTGGTT+AGG | - | chr8_3:7992779-7992798 | None:intergenic | 45.0% | |
| ! | AAGGTGCACACTTGCTAACT+TGG | - | chr8_3:7992893-7992912 | None:intergenic | 45.0% |
| TTGTCTCAACAACCTGGACA+TGG | - | chr8_3:7992990-7993009 | None:intergenic | 45.0% | |
| CTCGTCGATATGGTAAATGG+CGG | + | chr8_3:7993202-7993221 | Msa1274260:intron | 45.0% | |
| ! | TTTGGTGCAACATCATGGCA+GGG | - | chr8_3:7993254-7993273 | None:intergenic | 45.0% |
| !! | TTTTGGTGCAACATCATGGC+AGG | - | chr8_3:7993255-7993274 | None:intergenic | 45.0% |
| AATGCTGATGTGGCAGAGTT+TGG | + | chr8_3:7993479-7993498 | Msa1274260:intron | 45.0% | |
| TGATGTGGCAGAGTTTGGTA+AGG | + | chr8_3:7993484-7993503 | Msa1274260:intron | 45.0% | |
| GATGTGGCAGAGTTTGGTAA+GGG | + | chr8_3:7993485-7993504 | Msa1274260:intron | 45.0% | |
| ! | TCTGTAGGAGCTTTGACTCT+GGG | + | chr8_3:7993619-7993638 | Msa1274260:intron | 45.0% |
| GGCTCTTAACACATAATGCC+AGG | + | chr8_3:7993758-7993777 | Msa1274260:intron | 45.0% | |
| AGATCTGCAGCTTGAATACC+TGG | - | chr8_3:7993779-7993798 | None:intergenic | 45.0% | |
| TTGTGAAGAGGAGATGGGTA+TGG | - | chr8_3:7994066-7994085 | None:intergenic | 45.0% | |
| CTACAGAGTTCTATGCACAG+GGG | + | chr8_3:7994182-7994201 | Msa1274260:CDS | 45.0% | |
| TTAGCACAAGCAATTGGGCA+AGG | - | chr8_3:7994943-7994962 | None:intergenic | 45.0% | |
| ! | GACCATGAAAGCGTGTGATA+TGG | - | chr8_3:7995050-7995069 | None:intergenic | 45.0% |
| TTTCCCTCAAATTCCTGGTC+TGG | - | chr8_3:7995072-7995091 | None:intergenic | 45.0% | |
| !! | TCGCTTTTCCCTCAAATTCC+TGG | - | chr8_3:7995077-7995096 | None:intergenic | 45.0% |
| !! | TGACACTCTGAAGCTTCCAA+CGG | - | chr8_3:7995570-7995589 | None:intergenic | 45.0% |
| ! | TTCAGAGTGTCACAAGGTGA+AGG | + | chr8_3:7995578-7995597 | Msa1274260:CDS | 45.0% |
| CAACAATCATATGTGGCCAC+TGG | - | chr8_3:7995679-7995698 | None:intergenic | 45.0% | |
| ! | CGGTTGACTTCGCAAACATT+TGG | - | chr8_3:7995826-7995845 | None:intergenic | 45.0% |
| AGATCACCTCAGACTTGTCA+TGG | - | chr8_3:7996067-7996086 | None:intergenic | 45.0% | |
| TCAGGTAAAGGTAACATCCG+AGG | - | chr8_3:7996171-7996190 | None:intergenic | 45.0% | |
| TTTGGCAGGAAGAAGTTCGT+TGG | + | chr8_3:7996204-7996223 | Msa1274260:intron | 45.0% | |
| TTGGCAGGAAGAAGTTCGTT+GGG | + | chr8_3:7996205-7996224 | Msa1274260:intron | 45.0% | |
| GCCAACACAAGAAGAATCTG+AGG | + | chr8_3:7996244-7996263 | Msa1274260:CDS | 45.0% | |
| AGTCATGTGTATCCGTTGCA+AGG | + | chr8_3:7996439-7996458 | Msa1274260:three_prime_UTR | 45.0% | |
| GTCATGTGTATCCGTTGCAA+GGG | + | chr8_3:7996440-7996459 | Msa1274260:three_prime_UTR | 45.0% | |
| CTCATAGAGATCCCTTGCAA+CGG | - | chr8_3:7996454-7996473 | None:intergenic | 45.0% | |
| !!! | AATAAAATAAAAAATCTTTT+TGG | - | chr8_3:7994028-7994047 | None:intergenic | 5.0% |
| GGCAACTGAACTCAACTGCT+CGG | + | chr8_3:7990650-7990669 | Msa1274260:five_prime_UTR | 50.0% | |
| CTTGCTTTGGCATGCAATCG+CGG | - | chr8_3:7990712-7990731 | None:intergenic | 50.0% | |
| !! | GTGAATCGTGCTGCTTGCTT+TGG | - | chr8_3:7990725-7990744 | None:intergenic | 50.0% |
| GGACTATTGCCGTTCCTGTT+TGG | + | chr8_3:7991300-7991319 | Msa1274260:intron | 50.0% | |
| CGTAACACAAAGGCCCTGTT+TGG | - | chr8_3:7991509-7991528 | None:intergenic | 50.0% | |
| !!! | CCGCTGTTGTTTTGGGTTTC+AGG | + | chr8_3:7991702-7991721 | Msa1274260:intron | 50.0% |
| !! | ACTTACTGGCCTTGTATCCG+TGG | - | chr8_3:7992180-7992199 | None:intergenic | 50.0% |
| ACTGGCGTTACAGAGGTCTA+AGG | - | chr8_3:7992346-7992365 | None:intergenic | 50.0% | |
| ! | ATCAAGGACTGGCGTTACAG+AGG | - | chr8_3:7992353-7992372 | None:intergenic | 50.0% |
| GGACCGGGTTCAATACGTAT+GGG | - | chr8_3:7992737-7992756 | None:intergenic | 50.0% | |
| AGGACCGGGTTCAATACGTA+TGG | - | chr8_3:7992738-7992757 | None:intergenic | 50.0% | |
| CCGGTCCTTTCAATTGCATG+AGG | + | chr8_3:7992750-7992769 | Msa1274260:intron | 50.0% | |
| AGACTTCATGAGCCATGTCC+AGG | + | chr8_3:7992975-7992994 | Msa1274260:intron | 50.0% | |
| GGCCTCGTCGATATGGTAAA+TGG | + | chr8_3:7993199-7993218 | Msa1274260:intron | 50.0% | |
| CGCCATTTACCATATCGACG+AGG | - | chr8_3:7993204-7993223 | None:intergenic | 50.0% | |
| TGCAACATCATGGCAGGGTA+TGG | - | chr8_3:7993249-7993268 | None:intergenic | 50.0% | |
| !! | GTGTTGTCTATGGCGGATGA+CGG | - | chr8_3:7993317-7993336 | None:intergenic | 50.0% |
| !! | CACACTGTGGGTTAGGAAGT+AGG | - | chr8_3:7993442-7993461 | None:intergenic | 50.0% |
| CTACTTCCTAACCCACAGTG+TGG | + | chr8_3:7993440-7993459 | Msa1274260:intron | 50.0% | |
| AGTCATGGGCAGAGAACGAA+CGG | + | chr8_3:7993591-7993610 | Msa1274260:intron | 50.0% | |
| GAACGAACGGTGTTCTCTGT+AGG | + | chr8_3:7993604-7993623 | Msa1274260:intron | 50.0% | |
| ! | CTCTGTAGGAGCTTTGACTC+TGG | + | chr8_3:7993618-7993637 | Msa1274260:intron | 50.0% |
| TGGAGTGAAGAGTGGTGACT+TGG | - | chr8_3:7994008-7994027 | None:intergenic | 50.0% | |
| TGAAGAGGAGATGGGTATGG+TGG | - | chr8_3:7994063-7994082 | None:intergenic | 50.0% | |
| !! | GAAGGCATTGCAGGCATGAA+AGG | - | chr8_3:7994292-7994311 | None:intergenic | 50.0% |
| CATGCATGGCCACGAGAAAA+AGG | + | chr8_3:7994741-7994760 | Msa1274260:intron | 50.0% | |
| CTCATTGTTGGGCACTTCAG+CGG | + | chr8_3:7994870-7994889 | Msa1274260:intron | 50.0% | |
| TCATTGTTGGGCACTTCAGC+GGG | + | chr8_3:7994871-7994890 | Msa1274260:intron | 50.0% | |
| GGCCATATCACACGCTTTCA+TGG | + | chr8_3:7995045-7995064 | Msa1274260:intron | 50.0% | |
| TGGTCCAGACCAGGAATTTG+AGG | + | chr8_3:7995065-7995084 | Msa1274260:intron | 50.0% | |
| GGTCCAGACCAGGAATTTGA+GGG | + | chr8_3:7995066-7995085 | Msa1274260:intron | 50.0% | |
| !! | GACACTCTGAAGCTTCCAAC+GGG | - | chr8_3:7995569-7995588 | None:intergenic | 50.0% |
| ! | GGAAGCTTCAGAGTGTCACA+AGG | + | chr8_3:7995572-7995591 | Msa1274260:CDS | 50.0% |
| GAGTGTCACAAGGTGAAGGA+AGG | + | chr8_3:7995582-7995601 | Msa1274260:CDS | 50.0% | |
| GTAGCTGCATCTTCACTGTC+CGG | + | chr8_3:7996036-7996055 | Msa1274260:CDS | 50.0% | |
| GTTGGGACAGTTTGTGCTGT+AGG | + | chr8_3:7996222-7996241 | Msa1274260:CDS | 50.0% | |
| TTCGCTATGGGGTTCATGGT+AGG | - | chr8_3:7996287-7996306 | None:intergenic | 50.0% | |
| CAAGTTCGCTATGGGGTTCA+TGG | - | chr8_3:7996291-7996310 | None:intergenic | 50.0% | |
| TGAACCCCATAGCGAACTTG+TGG | + | chr8_3:7996291-7996310 | Msa1274260:CDS | 50.0% | |
| GAACCCCATAGCGAACTTGT+GGG | + | chr8_3:7996292-7996311 | Msa1274260:CDS | 50.0% | |
| AACCCCATAGCGAACTTGTG+GGG | + | chr8_3:7996293-7996312 | Msa1274260:CDS | 50.0% | |
| ATCCCCACAAGTTCGCTATG+GGG | - | chr8_3:7996298-7996317 | None:intergenic | 50.0% | |
| CATCCCCACAAGTTCGCTAT+GGG | - | chr8_3:7996299-7996318 | None:intergenic | 50.0% | |
| TCATCCCCACAAGTTCGCTA+TGG | - | chr8_3:7996300-7996319 | None:intergenic | 50.0% | |
| CGTTGCAAGGGATCTCTATG+AGG | + | chr8_3:7996452-7996471 | Msa1274260:three_prime_UTR | 50.0% | |
| CTCAACTGCTCGGAAATCGG+CGG | + | chr8_3:7990660-7990679 | Msa1274260:five_prime_UTR | 55.0% | |
| GGCATGCAATCGCGGAATTG+CGG | - | chr8_3:7990704-7990723 | None:intergenic | 55.0% | |
| ! | TTGGGTTTCAGGTGCAGCAG+TGG | + | chr8_3:7991713-7991732 | Msa1274260:intron | 55.0% |
| ACAACTAGGTTCAGCCCCTC+AGG | - | chr8_3:7991784-7991803 | None:intergenic | 55.0% | |
| GGATTTGGGCCTCGTCGATA+TGG | + | chr8_3:7993192-7993211 | Msa1274260:intron | 55.0% | |
| !! | CTATGGCGGATGACGGTATG+TGG | - | chr8_3:7993310-7993329 | None:intergenic | 55.0% |
| CGGGAGGAATTGGAGTTGTG+CGG | + | chr8_3:7994890-7994909 | Msa1274260:intron | 55.0% | |
| GGGAGGAATTGGAGTTGTGC+GGG | + | chr8_3:7994891-7994910 | Msa1274260:intron | 55.0% | |
| ACGCTTTCATGGTCCAGACC+AGG | + | chr8_3:7995056-7995075 | Msa1274260:intron | 55.0% | |
| !! | CTCTGAAGCTTCCAACGGGA+TGG | - | chr8_3:7995565-7995584 | None:intergenic | 55.0% |
| CGCTATCATGTTCCCTCCTC+TGG | - | chr8_3:7996010-7996029 | None:intergenic | 55.0% | |
| AACTGCTCGGAAATCGGCGG+TGG | + | chr8_3:7990663-7990682 | Msa1274260:five_prime_UTR | 60.0% | |
| ! | GCACAGTCCGTGCTGATCTG+TGG | + | chr8_3:7993343-7993362 | Msa1274260:intron | 60.0% |
| TTGTTGGGCACTTCAGCGGG+AGG | + | chr8_3:7994874-7994893 | Msa1274260:intron | 60.0% | |
| GGCACTTCAGCGGGAGGAAT+TGG | + | chr8_3:7994880-7994899 | Msa1274260:intron | 60.0% | |
| GCGACAGAGATCCATCCCGT+TGG | + | chr8_3:7995551-7995570 | Msa1274260:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 7990609 | 7996600 | 7990609 | ID=Msa1274260;Name=Msa1274260 |
| chr8_3 | mRNA | 7990609 | 7996600 | 7990609 | ID=Msa1274260-mRNA-1;Parent=Msa1274260;Name=Msa1274260-mRNA-1;_AED=0.25;_eAED=0.25;_QI=173|1|1|1|0.75|0.66|9|281|270 |
| chr8_3 | exon | 7990609 | 7990835 | 7990609 | ID=Msa1274260-mRNA-1:exon:3189;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7990939 | 7991024 | 7990939 | ID=Msa1274260-mRNA-1:exon:3190;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7991579 | 7991624 | 7991579 | ID=Msa1274260-mRNA-1:exon:3191;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7991724 | 7991862 | 7991724 | ID=Msa1274260-mRNA-1:exon:3192;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7993780 | 7993843 | 7993780 | ID=Msa1274260-mRNA-1:exon:3193;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7994158 | 7994209 | 7994158 | ID=Msa1274260-mRNA-1:exon:3194;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7995483 | 7995626 | 7995483 | ID=Msa1274260-mRNA-1:exon:3195;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7995960 | 7996079 | 7995960 | ID=Msa1274260-mRNA-1:exon:3196;Parent=Msa1274260-mRNA-1 |
| chr8_3 | exon | 7996212 | 7996600 | 7996212 | ID=Msa1274260-mRNA-1:exon:3197;Parent=Msa1274260-mRNA-1 |
| chr8_3 | five_prime_UTR | 7990609 | 7990781 | 7990609 | ID=Msa1274260-mRNA-1:five_prime_utr;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7990782 | 7990835 | 7990782 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7990939 | 7991024 | 7990939 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7991579 | 7991624 | 7991579 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7991724 | 7991862 | 7991724 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7993780 | 7993843 | 7993780 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7994158 | 7994209 | 7994158 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7995483 | 7995626 | 7995483 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7995960 | 7996079 | 7995960 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | CDS | 7996212 | 7996319 | 7996212 | ID=Msa1274260-mRNA-1:cds;Parent=Msa1274260-mRNA-1 |
| chr8_3 | three_prime_UTR | 7996320 | 7996600 | 7996320 | ID=Msa1274260-mRNA-1:three_prime_utr;Parent=Msa1274260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
