Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274990 | KEH15444.1 | 74.051 | 158 | 10 | 2 | 1 | 127 | 1 | 158 | 1.25e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274990 | sp|Q43839|G6PDC_SOLTU | 67.778 | 90 | 25 | 2 | 43 | 128 | 65 | 154 | 1.84e-32 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274990 | A0A072TD32 | 74.051 | 158 | 10 | 2 | 1 | 127 | 1 | 158 | 5.95e-73 | 224 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0235890 | Msa1274990 | 0.814854 | 1.246049e-51 | -8.615850e-47 |
| Msa0413930 | Msa1274990 | 0.809767 | 1.608329e-50 | -8.615850e-47 |
| Msa0315250 | Msa1274990 | 0.800593 | 1.340313e-48 | -8.615850e-47 |
| Msa1180150 | Msa1274990 | 0.831921 | 1.268979e-55 | -8.615850e-47 |
| Msa0946320 | Msa1274990 | 0.808051 | 3.745555e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274990 | MtrunA17_Chr8g0341321 | 74.214 | 159 | 10 | 2 | 1 | 128 | 1 | 159 | 5.07e-74 | 230 |
| Msa1274990 | MtrunA17_Chr7g0222441 | 64.045 | 89 | 29 | 1 | 40 | 128 | 86 | 171 | 9.38e-31 | 114 |
| Msa1274990 | MtrunA17_Chr7g0271531 | 47.312 | 93 | 49 | 0 | 36 | 128 | 100 | 192 | 1.70e-23 | 94.4 |
| Msa1274990 | MtrunA17_Chr6g0458971 | 47.253 | 91 | 40 | 4 | 28 | 117 | 3 | 86 | 3.24e-16 | 73.6 |
| Msa1274990 | MtrunA17_Chr7g0228611 | 58.065 | 62 | 24 | 2 | 61 | 121 | 27 | 87 | 8.61e-16 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1274990 | AT5G35790.1 | 67.368 | 95 | 26 | 2 | 34 | 128 | 65 | 154 | 8.42e-32 | 118 |
| Msa1274990 | AT5G13110.1 | 64.773 | 88 | 30 | 1 | 41 | 128 | 87 | 173 | 2.01e-31 | 117 |
| Msa1274990 | AT1G24280.1 | 65.169 | 89 | 20 | 2 | 51 | 128 | 88 | 176 | 1.23e-30 | 115 |
| Msa1274990 | AT1G09420.1 | 56.061 | 66 | 29 | 0 | 63 | 128 | 152 | 217 | 2.04e-21 | 89.0 |
| Msa1274990 | AT1G09420.2 | 56.061 | 66 | 29 | 0 | 63 | 128 | 152 | 217 | 2.05e-21 | 89.0 |
| Msa1274990 | AT3G27300.1 | 67.241 | 58 | 17 | 2 | 61 | 117 | 29 | 85 | 5.13e-17 | 76.3 |
| Msa1274990 | AT3G27300.3 | 67.241 | 58 | 17 | 2 | 61 | 117 | 29 | 85 | 5.13e-17 | 76.3 |
| Msa1274990 | AT3G27300.2 | 67.241 | 58 | 17 | 2 | 61 | 117 | 29 | 85 | 5.13e-17 | 76.3 |
| Msa1274990 | AT3G27300.5 | 67.241 | 58 | 17 | 2 | 61 | 117 | 83 | 139 | 5.23e-17 | 76.3 |
| Msa1274990 | AT3G27300.4 | 67.241 | 58 | 17 | 2 | 61 | 117 | 100 | 156 | 6.26e-17 | 75.9 |
| Msa1274990 | AT5G40760.2 | 64.815 | 54 | 18 | 1 | 65 | 117 | 32 | 85 | 1.28e-15 | 72.4 |
| Msa1274990 | AT5G40760.1 | 64.815 | 54 | 18 | 1 | 65 | 117 | 32 | 85 | 1.28e-15 | 72.4 |
Find 20 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACATTGTCACATCTTA+TGG | 0.175931 | 8_3:-8856491 | Msa1274990:CDS |
| TAACTCTTCATCAGTCATTT+TGG | 0.241437 | 8_3:+8854280 | None:intergenic |
| ATAACTGTTGTTGGAGCATC+TGG | 0.335491 | 8_3:-8854522 | Msa1274990:CDS |
| AACCTTAGTATAACTGTTGT+TGG | 0.383313 | 8_3:-8854531 | Msa1274990:CDS |
| CAATTCTGCATGTTAAAGTC+TGG | 0.435685 | 8_3:+8854243 | None:intergenic |
| GATCCTGTGGATTCAGAGTC+TGG | 0.438607 | 8_3:+8854555 | None:intergenic |
| TGTTGCATGGCAAGTGTACT+AGG | 0.447420 | 8_3:-8856521 | None:intergenic |
| TGAATTTAGTAGTGCAAGAA+AGG | 0.465543 | 8_3:+8856423 | None:intergenic |
| AAATGACTGATGAAGAGTTA+AGG | 0.494086 | 8_3:-8854277 | Msa1274990:CDS |
| AACAACAGTTATACTAAGGT+TGG | 0.501460 | 8_3:+8854533 | None:intergenic |
| TAGAAAAGAGCAAAGAGTGC+TGG | 0.507946 | 8_3:+8854474 | None:intergenic |
| CTCCAACAACAGTTATACTA+AGG | 0.511684 | 8_3:+8854529 | None:intergenic |
| AACAATCCTTCAACTTGTTG+AGG | 0.519106 | 8_3:+8854585 | None:intergenic |
| TATACTAAGGTTGGATCCTG+TGG | 0.540104 | 8_3:+8854542 | None:intergenic |
| GGCCAGCCTCAACAAGTTGA+AGG | 0.543781 | 8_3:-8854591 | Msa1274990:intron |
| GTGAATTTAGTACAAAGTTG+TGG | 0.561013 | 8_3:+8856455 | None:intergenic |
| TTATTGTGTTTGGATATGCT+CGG | 0.565032 | 8_3:-8854304 | Msa1274990:CDS |
| TTGCCAGACTCTGAATCCAC+AGG | 0.579910 | 8_3:-8854558 | Msa1274990:CDS |
| CTATGAAGATTGGTTACCCG+AGG | 0.607456 | 8_3:-8854454 | Msa1274990:intron |
| TAACATGCAGAATTGACAAG+AGG | 0.611745 | 8_3:-8854235 | Msa1274990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAAATAAAAACAAAAT+TGG | + | chr8_3:8855655-8855674 | None:intergenic | 10.0% |
| !!! | AATTTTTATGAATAAAAAAG+AGG | + | chr8_3:8855723-8855742 | None:intergenic | 10.0% |
| !! | GAAATAAATAAAAACAAAAT+TGG | + | chr8_3:8855655-8855674 | None:intergenic | 10.0% |
| !!! | AATTTTTATGAATAAAAAAG+AGG | + | chr8_3:8855723-8855742 | None:intergenic | 10.0% |
| !!! | AAATTCATTTGTTTTGTAAA+TGG | - | chr8_3:8854357-8854376 | Msa1274990:intron | 15.0% |
| !!! | TATATTACAATAGTTCTTTT+AGG | - | chr8_3:8854479-8854498 | Msa1274990:CDS | 15.0% |
| !! | GGTGTAAAAAATAATAAAAA+TGG | + | chr8_3:8855682-8855701 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTACACCATTTT+TGG | - | chr8_3:8855687-8855706 | Msa1274990:intron | 15.0% |
| !! | CTTTAAACATGTTATAATTA+TGG | - | chr8_3:8855886-8855905 | Msa1274990:intron | 15.0% |
| !!! | AAATTCATTTGTTTTGTAAA+TGG | - | chr8_3:8854357-8854376 | Msa1274990:intron | 15.0% |
| !!! | TATATTACAATAGTTCTTTT+AGG | - | chr8_3:8854479-8854498 | Msa1274990:CDS | 15.0% |
| !! | GGTGTAAAAAATAATAAAAA+TGG | + | chr8_3:8855682-8855701 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTACACCATTTT+TGG | - | chr8_3:8855687-8855706 | Msa1274990:intron | 15.0% |
| !! | CTTTAAACATGTTATAATTA+TGG | - | chr8_3:8855886-8855905 | Msa1274990:intron | 15.0% |
| !!! | TATGATATCATACTTTTAAC+CGG | + | chr8_3:8854980-8854999 | None:intergenic | 20.0% |
| !! | AAATCAAATGTTTGTCTAAA+AGG | - | chr8_3:8855042-8855061 | Msa1274990:intron | 20.0% |
| !!! | ATACACAAGGTTTTAAAAAA+CGG | - | chr8_3:8855073-8855092 | Msa1274990:intron | 20.0% |
| !!! | AACTAAAATACCATTTTGAT+TGG | + | chr8_3:8855367-8855386 | None:intergenic | 20.0% |
| !! | ACATATAGTTAAAAAACCAA+GGG | + | chr8_3:8855575-8855594 | None:intergenic | 20.0% |
| !! | TACATATAGTTAAAAAACCA+AGG | + | chr8_3:8855576-8855595 | None:intergenic | 20.0% |
| !!! | TTGGTTTTTTAACTATATGT+AGG | - | chr8_3:8855575-8855594 | Msa1274990:intron | 20.0% |
| !! | CTATATGTAGGAATTAAATT+TGG | - | chr8_3:8855587-8855606 | Msa1274990:intron | 20.0% |
| !! | CTGTATATGATTTAAATGTT+TGG | - | chr8_3:8856375-8856394 | Msa1274990:intron | 20.0% |
| !!! | TATGATATCATACTTTTAAC+CGG | + | chr8_3:8854980-8854999 | None:intergenic | 20.0% |
| !! | AAATCAAATGTTTGTCTAAA+AGG | - | chr8_3:8855042-8855061 | Msa1274990:intron | 20.0% |
| !!! | ATACACAAGGTTTTAAAAAA+CGG | - | chr8_3:8855073-8855092 | Msa1274990:intron | 20.0% |
| !!! | AACTAAAATACCATTTTGAT+TGG | + | chr8_3:8855367-8855386 | None:intergenic | 20.0% |
| !! | ACATATAGTTAAAAAACCAA+GGG | + | chr8_3:8855575-8855594 | None:intergenic | 20.0% |
| !! | TACATATAGTTAAAAAACCA+AGG | + | chr8_3:8855576-8855595 | None:intergenic | 20.0% |
| !!! | TTGGTTTTTTAACTATATGT+AGG | - | chr8_3:8855575-8855594 | Msa1274990:intron | 20.0% |
| !! | CTATATGTAGGAATTAAATT+TGG | - | chr8_3:8855587-8855606 | Msa1274990:intron | 20.0% |
| !! | CTGTATATGATTTAAATGTT+TGG | - | chr8_3:8856375-8856394 | Msa1274990:intron | 20.0% |
| !!! | ACAATAGTTCTTTTAGGATT+TGG | - | chr8_3:8854485-8854504 | Msa1274990:CDS | 25.0% |
| !!! | CAATAGTTCTTTTAGGATTT+GGG | - | chr8_3:8854486-8854505 | Msa1274990:CDS | 25.0% |
| !! | ATCATCTTAGAATTTGAGTT+AGG | - | chr8_3:8854716-8854735 | Msa1274990:intron | 25.0% |
| ! | TAAACATGAGTTAATAAGTG+GGG | + | chr8_3:8854786-8854805 | None:intergenic | 25.0% |
| ! | CTAAACATGAGTTAATAAGT+GGG | + | chr8_3:8854787-8854806 | None:intergenic | 25.0% |
| !!! | AAGCCTATTTTTGTTTTGTT+CGG | - | chr8_3:8854866-8854885 | Msa1274990:intron | 25.0% |
| ! | TTGTGAACAAATAAATGAGT+CGG | + | chr8_3:8854920-8854939 | None:intergenic | 25.0% |
| ! | AAAGGTAAATATCATACACA+AGG | - | chr8_3:8855060-8855079 | Msa1274990:intron | 25.0% |
| !!! | TACACAAGGTTTTAAAAAAC+GGG | - | chr8_3:8855074-8855093 | Msa1274990:intron | 25.0% |
| !!! | TTTTGACTGAATTTTCAAGT+TGG | + | chr8_3:8855269-8855288 | None:intergenic | 25.0% |
| !!! | GTATTTTAGTTTGTGAGATT+TGG | - | chr8_3:8855376-8855395 | Msa1274990:intron | 25.0% |
| !!! | ATGATCAAGGTTCTAAAAAA+CGG | + | chr8_3:8856084-8856103 | None:intergenic | 25.0% |
| !! | ATGCAGAATTTTATTGTGTT+TGG | - | chr8_3:8856433-8856452 | Msa1274990:CDS | 25.0% |
| !!! | ACAATAGTTCTTTTAGGATT+TGG | - | chr8_3:8854485-8854504 | Msa1274990:CDS | 25.0% |
| !!! | CAATAGTTCTTTTAGGATTT+GGG | - | chr8_3:8854486-8854505 | Msa1274990:CDS | 25.0% |
| !! | ATCATCTTAGAATTTGAGTT+AGG | - | chr8_3:8854716-8854735 | Msa1274990:intron | 25.0% |
| ! | TAAACATGAGTTAATAAGTG+GGG | + | chr8_3:8854786-8854805 | None:intergenic | 25.0% |
| ! | CTAAACATGAGTTAATAAGT+GGG | + | chr8_3:8854787-8854806 | None:intergenic | 25.0% |
| !!! | AAGCCTATTTTTGTTTTGTT+CGG | - | chr8_3:8854866-8854885 | Msa1274990:intron | 25.0% |
| ! | TTGTGAACAAATAAATGAGT+CGG | + | chr8_3:8854920-8854939 | None:intergenic | 25.0% |
| ! | AAAGGTAAATATCATACACA+AGG | - | chr8_3:8855060-8855079 | Msa1274990:intron | 25.0% |
| !!! | TACACAAGGTTTTAAAAAAC+GGG | - | chr8_3:8855074-8855093 | Msa1274990:intron | 25.0% |
| !!! | TTTTGACTGAATTTTCAAGT+TGG | + | chr8_3:8855269-8855288 | None:intergenic | 25.0% |
| !!! | GTATTTTAGTTTGTGAGATT+TGG | - | chr8_3:8855376-8855395 | Msa1274990:intron | 25.0% |
| !!! | ATGATCAAGGTTCTAAAAAA+CGG | + | chr8_3:8856084-8856103 | None:intergenic | 25.0% |
| !! | ATGCAGAATTTTATTGTGTT+TGG | - | chr8_3:8856433-8856452 | Msa1274990:CDS | 25.0% |
| TCAAACATTGTCACATCTTA+TGG | - | chr8_3:8854256-8854275 | Msa1274990:CDS | 30.0% | |
| GTGAATTTAGTACAAAGTTG+TGG | + | chr8_3:8854295-8854314 | None:intergenic | 30.0% | |
| TGAATTTAGTAGTGCAAGAA+AGG | + | chr8_3:8854327-8854346 | None:intergenic | 30.0% | |
| ! | ATTCTGCTCTTTCTAACTTT+TGG | - | chr8_3:8854385-8854404 | Msa1274990:intron | 30.0% |
| GTACTTTACATGATCACATA+TGG | + | chr8_3:8854425-8854444 | None:intergenic | 30.0% | |
| !! | CTTACAAGCTGATTTTGTAA+GGG | + | chr8_3:8854752-8854771 | None:intergenic | 30.0% |
| !! | TCTTACAAGCTGATTTTGTA+AGG | + | chr8_3:8854753-8854772 | None:intergenic | 30.0% |
| CCTAAACATGAGTTAATAAG+TGG | + | chr8_3:8854788-8854807 | None:intergenic | 30.0% | |
| CCACTTATTAACTCATGTTT+AGG | - | chr8_3:8854785-8854804 | Msa1274990:intron | 30.0% | |
| CAACCGAACAAAACAAAAAT+AGG | + | chr8_3:8854872-8854891 | None:intergenic | 30.0% | |
| TTTCTTTCTCAGCGTTAAAA+GGG | + | chr8_3:8855160-8855179 | None:intergenic | 30.0% | |
| ATTTCTTTCTCAGCGTTAAA+AGG | + | chr8_3:8855161-8855180 | None:intergenic | 30.0% | |
| !!! | GGTTTTAGAAAATTCAACAG+TGG | - | chr8_3:8855410-8855429 | Msa1274990:intron | 30.0% |
| AATATGGGAATGTATGATCA+AGG | + | chr8_3:8856097-8856116 | None:intergenic | 30.0% | |
| ATACATTCCCATATTTATGC+AGG | - | chr8_3:8856102-8856121 | Msa1274990:intron | 30.0% | |
| AACAACAGTTATACTAAGGT+TGG | + | chr8_3:8856217-8856236 | None:intergenic | 30.0% | |
| AACCTTAGTATAACTGTTGT+TGG | - | chr8_3:8856216-8856235 | Msa1274990:intron | 30.0% | |
| ! | TGCTGGAAAAATCTTCTTTT+TGG | + | chr8_3:8856259-8856278 | None:intergenic | 30.0% |
| ! | TTGCTCTTTTCTATGAAGAT+TGG | - | chr8_3:8856283-8856302 | Msa1274990:intron | 30.0% |
| TTATTGTGTTTGGATATGCT+CGG | - | chr8_3:8856443-8856462 | Msa1274990:CDS | 30.0% | |
| ! | TAACTCTTCATCAGTCATTT+TGG | + | chr8_3:8856470-8856489 | None:intergenic | 30.0% |
| AAATGACTGATGAAGAGTTA+AGG | - | chr8_3:8856470-8856489 | Msa1274990:CDS | 30.0% | |
| TCAAACATTGTCACATCTTA+TGG | - | chr8_3:8854256-8854275 | Msa1274990:CDS | 30.0% | |
| GTGAATTTAGTACAAAGTTG+TGG | + | chr8_3:8854295-8854314 | None:intergenic | 30.0% | |
| TGAATTTAGTAGTGCAAGAA+AGG | + | chr8_3:8854327-8854346 | None:intergenic | 30.0% | |
| ! | ATTCTGCTCTTTCTAACTTT+TGG | - | chr8_3:8854385-8854404 | Msa1274990:intron | 30.0% |
| GTACTTTACATGATCACATA+TGG | + | chr8_3:8854425-8854444 | None:intergenic | 30.0% | |
| !! | CTTACAAGCTGATTTTGTAA+GGG | + | chr8_3:8854752-8854771 | None:intergenic | 30.0% |
| !! | TCTTACAAGCTGATTTTGTA+AGG | + | chr8_3:8854753-8854772 | None:intergenic | 30.0% |
| CCTAAACATGAGTTAATAAG+TGG | + | chr8_3:8854788-8854807 | None:intergenic | 30.0% | |
| CCACTTATTAACTCATGTTT+AGG | - | chr8_3:8854785-8854804 | Msa1274990:intron | 30.0% | |
| CAACCGAACAAAACAAAAAT+AGG | + | chr8_3:8854872-8854891 | None:intergenic | 30.0% | |
| TTTCTTTCTCAGCGTTAAAA+GGG | + | chr8_3:8855160-8855179 | None:intergenic | 30.0% | |
| ATTTCTTTCTCAGCGTTAAA+AGG | + | chr8_3:8855161-8855180 | None:intergenic | 30.0% | |
| !!! | GGTTTTAGAAAATTCAACAG+TGG | - | chr8_3:8855410-8855429 | Msa1274990:intron | 30.0% |
| AATATGGGAATGTATGATCA+AGG | + | chr8_3:8856097-8856116 | None:intergenic | 30.0% | |
| ATACATTCCCATATTTATGC+AGG | - | chr8_3:8856102-8856121 | Msa1274990:intron | 30.0% | |
| AACAACAGTTATACTAAGGT+TGG | + | chr8_3:8856217-8856236 | None:intergenic | 30.0% | |
| AACCTTAGTATAACTGTTGT+TGG | - | chr8_3:8856216-8856235 | Msa1274990:intron | 30.0% | |
| ! | TGCTGGAAAAATCTTCTTTT+TGG | + | chr8_3:8856259-8856278 | None:intergenic | 30.0% |
| ! | TTGCTCTTTTCTATGAAGAT+TGG | - | chr8_3:8856283-8856302 | Msa1274990:intron | 30.0% |
| TTATTGTGTTTGGATATGCT+CGG | - | chr8_3:8856443-8856462 | Msa1274990:CDS | 30.0% | |
| ! | TAACTCTTCATCAGTCATTT+TGG | + | chr8_3:8856470-8856489 | None:intergenic | 30.0% |
| AAATGACTGATGAAGAGTTA+AGG | - | chr8_3:8856470-8856489 | Msa1274990:CDS | 30.0% | |
| !!! | GTTCTTTTAGGATTTGGGTT+AGG | - | chr8_3:8854491-8854510 | Msa1274990:CDS | 35.0% |
| !!! | CTTATAAGCTGGTTTTGCAA+GGG | + | chr8_3:8854527-8854546 | None:intergenic | 35.0% |
| !!! | TCTTATAAGCTGGTTTTGCA+AGG | + | chr8_3:8854528-8854547 | None:intergenic | 35.0% |
| AATGATATAAGGCATGGAGA+CGG | + | chr8_3:8854577-8854596 | None:intergenic | 35.0% | |
| ACGTTGAATGATATAAGGCA+TGG | + | chr8_3:8854583-8854602 | None:intergenic | 35.0% | |
| ATGCCTTATATCATTCAACG+TGG | - | chr8_3:8854582-8854601 | Msa1274990:CDS | 35.0% | |
| TGCCTTATATCATTCAACGT+GGG | - | chr8_3:8854583-8854602 | Msa1274990:CDS | 35.0% | |
| !!! | TGGCCAAACTGATTTTAGTT+CGG | - | chr8_3:8854686-8854705 | Msa1274990:intron | 35.0% |
| ! | GATTTTGTAAGGGTTGAGTT+AGG | + | chr8_3:8854742-8854761 | None:intergenic | 35.0% |
| ! | ATTTGTTAAGAGTCCCGTAT+TGG | + | chr8_3:8854822-8854841 | None:intergenic | 35.0% |
| TAAATGAGTCGGCAACATAT+AGG | + | chr8_3:8854909-8854928 | None:intergenic | 35.0% | |
| TTGACTACTAGTGCAATATC+CGG | - | chr8_3:8854958-8854977 | Msa1274990:intron | 35.0% | |
| TTCTTTCTCAGCGTTAAAAG+GGG | + | chr8_3:8855159-8855178 | None:intergenic | 35.0% | |
| GCGTGAAAATCCAATCAAAA+TGG | - | chr8_3:8855354-8855373 | Msa1274990:intron | 35.0% | |
| !! | TGAGATTTGGTGAACATTTG+AGG | - | chr8_3:8855389-8855408 | Msa1274990:intron | 35.0% |
| AACATATAGGACAAAACTGC+AGG | + | chr8_3:8855520-8855539 | None:intergenic | 35.0% | |
| GTGCATAAGCAACAACATAT+AGG | + | chr8_3:8855533-8855552 | None:intergenic | 35.0% | |
| ! | AAGGGTGCAGATATGAAAAA+GGG | + | chr8_3:8855557-8855576 | None:intergenic | 35.0% |
| ! | AAAAACAAAATTGGCTCAGC+TGG | + | chr8_3:8855646-8855665 | None:intergenic | 35.0% |
| ! | AGGCATTAAAGTGCCAAAAA+TGG | + | chr8_3:8855703-8855722 | None:intergenic | 35.0% |
| TTCCCATATTTATGCAGGTT+TGG | - | chr8_3:8856107-8856126 | Msa1274990:intron | 35.0% | |
| AGCCAAACCTGCATAAATAT+GGG | + | chr8_3:8856112-8856131 | None:intergenic | 35.0% | |
| !! | AACAATCCTTCAACTTGTTG+AGG | + | chr8_3:8856165-8856184 | None:intergenic | 35.0% |
| CTCCAACAACAGTTATACTA+AGG | + | chr8_3:8856221-8856240 | None:intergenic | 35.0% | |
| !! | GAAAAATCTTCTTTTTGGCG+AGG | + | chr8_3:8856254-8856273 | None:intergenic | 35.0% |
| TACTATCACAATTCAGACCT+CGG | + | chr8_3:8856313-8856332 | None:intergenic | 35.0% | |
| ! | TGTTTGGAACATCATATCTG+AGG | - | chr8_3:8856391-8856410 | Msa1274990:intron | 35.0% |
| CAATTCTGCATGTTAAAGTC+TGG | + | chr8_3:8856507-8856526 | None:intergenic | 35.0% | |
| TAACATGCAGAATTGACAAG+AGG | - | chr8_3:8856512-8856531 | Msa1274990:CDS | 35.0% | |
| !!! | GTTCTTTTAGGATTTGGGTT+AGG | - | chr8_3:8854491-8854510 | Msa1274990:CDS | 35.0% |
| !!! | CTTATAAGCTGGTTTTGCAA+GGG | + | chr8_3:8854527-8854546 | None:intergenic | 35.0% |
| !!! | TCTTATAAGCTGGTTTTGCA+AGG | + | chr8_3:8854528-8854547 | None:intergenic | 35.0% |
| AATGATATAAGGCATGGAGA+CGG | + | chr8_3:8854577-8854596 | None:intergenic | 35.0% | |
| ACGTTGAATGATATAAGGCA+TGG | + | chr8_3:8854583-8854602 | None:intergenic | 35.0% | |
| ATGCCTTATATCATTCAACG+TGG | - | chr8_3:8854582-8854601 | Msa1274990:CDS | 35.0% | |
| TGCCTTATATCATTCAACGT+GGG | - | chr8_3:8854583-8854602 | Msa1274990:CDS | 35.0% | |
| !!! | TGGCCAAACTGATTTTAGTT+CGG | - | chr8_3:8854686-8854705 | Msa1274990:intron | 35.0% |
| ! | GATTTTGTAAGGGTTGAGTT+AGG | + | chr8_3:8854742-8854761 | None:intergenic | 35.0% |
| ! | ATTTGTTAAGAGTCCCGTAT+TGG | + | chr8_3:8854822-8854841 | None:intergenic | 35.0% |
| TAAATGAGTCGGCAACATAT+AGG | + | chr8_3:8854909-8854928 | None:intergenic | 35.0% | |
| TTGACTACTAGTGCAATATC+CGG | - | chr8_3:8854958-8854977 | Msa1274990:intron | 35.0% | |
| TTCTTTCTCAGCGTTAAAAG+GGG | + | chr8_3:8855159-8855178 | None:intergenic | 35.0% | |
| GCGTGAAAATCCAATCAAAA+TGG | - | chr8_3:8855354-8855373 | Msa1274990:intron | 35.0% | |
| !! | TGAGATTTGGTGAACATTTG+AGG | - | chr8_3:8855389-8855408 | Msa1274990:intron | 35.0% |
| AACATATAGGACAAAACTGC+AGG | + | chr8_3:8855520-8855539 | None:intergenic | 35.0% | |
| GTGCATAAGCAACAACATAT+AGG | + | chr8_3:8855533-8855552 | None:intergenic | 35.0% | |
| ! | AAGGGTGCAGATATGAAAAA+GGG | + | chr8_3:8855557-8855576 | None:intergenic | 35.0% |
| ! | AAAAACAAAATTGGCTCAGC+TGG | + | chr8_3:8855646-8855665 | None:intergenic | 35.0% |
| ! | AGGCATTAAAGTGCCAAAAA+TGG | + | chr8_3:8855703-8855722 | None:intergenic | 35.0% |
| TTCCCATATTTATGCAGGTT+TGG | - | chr8_3:8856107-8856126 | Msa1274990:intron | 35.0% | |
| AGCCAAACCTGCATAAATAT+GGG | + | chr8_3:8856112-8856131 | None:intergenic | 35.0% | |
| !! | AACAATCCTTCAACTTGTTG+AGG | + | chr8_3:8856165-8856184 | None:intergenic | 35.0% |
| CTCCAACAACAGTTATACTA+AGG | + | chr8_3:8856221-8856240 | None:intergenic | 35.0% | |
| !! | GAAAAATCTTCTTTTTGGCG+AGG | + | chr8_3:8856254-8856273 | None:intergenic | 35.0% |
| TACTATCACAATTCAGACCT+CGG | + | chr8_3:8856313-8856332 | None:intergenic | 35.0% | |
| ! | TGTTTGGAACATCATATCTG+AGG | - | chr8_3:8856391-8856410 | Msa1274990:intron | 35.0% |
| CAATTCTGCATGTTAAAGTC+TGG | + | chr8_3:8856507-8856526 | None:intergenic | 35.0% | |
| TAACATGCAGAATTGACAAG+AGG | - | chr8_3:8856512-8856531 | Msa1274990:CDS | 35.0% | |
| !! | GGTTTTGCAAGGGTTGATTT+AGG | + | chr8_3:8854517-8854536 | None:intergenic | 40.0% |
| GCAGTTCTCATCTTATAAGC+TGG | + | chr8_3:8854538-8854557 | None:intergenic | 40.0% | |
| ATGATATAAGGCATGGAGAC+GGG | + | chr8_3:8854576-8854595 | None:intergenic | 40.0% | |
| GCCTTATATCATTCAACGTG+GGG | - | chr8_3:8854584-8854603 | Msa1274990:CDS | 40.0% | |
| TCCCCACGTTGAATGATATA+AGG | + | chr8_3:8854588-8854607 | None:intergenic | 40.0% | |
| ATACTTCCTACTTCCAAGAC+TGG | - | chr8_3:8854615-8854634 | Msa1274990:intron | 40.0% | |
| GAGCCGAACTAAAATCAGTT+TGG | + | chr8_3:8854692-8854711 | None:intergenic | 40.0% | |
| !!! | AACTGATTTTAGTTCGGCTC+TGG | - | chr8_3:8854692-8854711 | Msa1274990:intron | 40.0% |
| ! | AGGCCTTATCTCATCCAATA+CGG | - | chr8_3:8854805-8854824 | Msa1274990:intron | 40.0% |
| !!! | ATTTGTAACGGCCGTTTTTG+CGG | + | chr8_3:8855106-8855125 | None:intergenic | 40.0% |
| CAAAAACGGCCGTTACAAAT+CGG | - | chr8_3:8855106-8855125 | Msa1274990:intron | 40.0% | |
| AAAAGGGGCAAAAACGGTAA+CGG | + | chr8_3:8855144-8855163 | None:intergenic | 40.0% | |
| AGCGTTAAAAGGGGCAAAAA+CGG | + | chr8_3:8855150-8855169 | None:intergenic | 40.0% | |
| !! | TTTCAAGTTGGAGTCCGTAA+CGG | + | chr8_3:8855257-8855276 | None:intergenic | 40.0% |
| GTTGTTCTTCACGTGAAGAA+AGG | - | chr8_3:8855446-8855465 | Msa1274990:intron | 40.0% | |
| ACGTGAAGAAAGGAAGAAGA+AGG | - | chr8_3:8855456-8855475 | Msa1274990:intron | 40.0% | |
| TATAGGACAAAACTGCAGGT+GGG | + | chr8_3:8855516-8855535 | None:intergenic | 40.0% | |
| ATATAGGACAAAACTGCAGG+TGG | + | chr8_3:8855517-8855536 | None:intergenic | 40.0% | |
| AGGGTGCAGATATGAAAAAG+GGG | + | chr8_3:8855556-8855575 | None:intergenic | 40.0% | |
| ! | CAAGGGTGCAGATATGAAAA+AGG | + | chr8_3:8855558-8855577 | None:intergenic | 40.0% |
| !! | CTTTTTCATATCTGCACCCT+TGG | - | chr8_3:8855556-8855575 | Msa1274990:intron | 40.0% |
| GATACAAATAACGGTCTTCG+CGG | + | chr8_3:8856001-8856020 | None:intergenic | 40.0% | |
| !! | AAGGTTCTAAAAAACGGTCG+CGG | + | chr8_3:8856078-8856097 | None:intergenic | 40.0% |
| CAGCCAAACCTGCATAAATA+TGG | + | chr8_3:8856113-8856132 | None:intergenic | 40.0% | |
| AGGTTTGGCTGAAAGTTCAT+TGG | - | chr8_3:8856122-8856141 | Msa1274990:intron | 40.0% | |
| AGTTCATTGGCCAAAGAAGA+TGG | - | chr8_3:8856135-8856154 | Msa1274990:intron | 40.0% | |
| TATACTAAGGTTGGATCCTG+TGG | + | chr8_3:8856208-8856227 | None:intergenic | 40.0% | |
| ! | ATAACTGTTGTTGGAGCATC+TGG | - | chr8_3:8856225-8856244 | Msa1274990:intron | 40.0% |
| ! | TAGAAAAGAGCAAAGAGTGC+TGG | + | chr8_3:8856276-8856295 | None:intergenic | 40.0% |
| ACTATCACAATTCAGACCTC+GGG | + | chr8_3:8856312-8856331 | None:intergenic | 40.0% | |
| !! | GGTTTTGCAAGGGTTGATTT+AGG | + | chr8_3:8854517-8854536 | None:intergenic | 40.0% |
| GCAGTTCTCATCTTATAAGC+TGG | + | chr8_3:8854538-8854557 | None:intergenic | 40.0% | |
| ATGATATAAGGCATGGAGAC+GGG | + | chr8_3:8854576-8854595 | None:intergenic | 40.0% | |
| GCCTTATATCATTCAACGTG+GGG | - | chr8_3:8854584-8854603 | Msa1274990:CDS | 40.0% | |
| TCCCCACGTTGAATGATATA+AGG | + | chr8_3:8854588-8854607 | None:intergenic | 40.0% | |
| ATACTTCCTACTTCCAAGAC+TGG | - | chr8_3:8854615-8854634 | Msa1274990:intron | 40.0% | |
| GAGCCGAACTAAAATCAGTT+TGG | + | chr8_3:8854692-8854711 | None:intergenic | 40.0% | |
| !!! | AACTGATTTTAGTTCGGCTC+TGG | - | chr8_3:8854692-8854711 | Msa1274990:intron | 40.0% |
| ! | AGGCCTTATCTCATCCAATA+CGG | - | chr8_3:8854805-8854824 | Msa1274990:intron | 40.0% |
| !!! | ATTTGTAACGGCCGTTTTTG+CGG | + | chr8_3:8855106-8855125 | None:intergenic | 40.0% |
| CAAAAACGGCCGTTACAAAT+CGG | - | chr8_3:8855106-8855125 | Msa1274990:intron | 40.0% | |
| AAAAGGGGCAAAAACGGTAA+CGG | + | chr8_3:8855144-8855163 | None:intergenic | 40.0% | |
| AGCGTTAAAAGGGGCAAAAA+CGG | + | chr8_3:8855150-8855169 | None:intergenic | 40.0% | |
| !! | TTTCAAGTTGGAGTCCGTAA+CGG | + | chr8_3:8855257-8855276 | None:intergenic | 40.0% |
| GTTGTTCTTCACGTGAAGAA+AGG | - | chr8_3:8855446-8855465 | Msa1274990:intron | 40.0% | |
| ACGTGAAGAAAGGAAGAAGA+AGG | - | chr8_3:8855456-8855475 | Msa1274990:intron | 40.0% | |
| TATAGGACAAAACTGCAGGT+GGG | + | chr8_3:8855516-8855535 | None:intergenic | 40.0% | |
| ATATAGGACAAAACTGCAGG+TGG | + | chr8_3:8855517-8855536 | None:intergenic | 40.0% | |
| AGGGTGCAGATATGAAAAAG+GGG | + | chr8_3:8855556-8855575 | None:intergenic | 40.0% | |
| ! | CAAGGGTGCAGATATGAAAA+AGG | + | chr8_3:8855558-8855577 | None:intergenic | 40.0% |
| !! | CTTTTTCATATCTGCACCCT+TGG | - | chr8_3:8855556-8855575 | Msa1274990:intron | 40.0% |
| GATACAAATAACGGTCTTCG+CGG | + | chr8_3:8856001-8856020 | None:intergenic | 40.0% | |
| !! | AAGGTTCTAAAAAACGGTCG+CGG | + | chr8_3:8856078-8856097 | None:intergenic | 40.0% |
| CAGCCAAACCTGCATAAATA+TGG | + | chr8_3:8856113-8856132 | None:intergenic | 40.0% | |
| AGGTTTGGCTGAAAGTTCAT+TGG | - | chr8_3:8856122-8856141 | Msa1274990:intron | 40.0% | |
| AGTTCATTGGCCAAAGAAGA+TGG | - | chr8_3:8856135-8856154 | Msa1274990:intron | 40.0% | |
| TATACTAAGGTTGGATCCTG+TGG | + | chr8_3:8856208-8856227 | None:intergenic | 40.0% | |
| ! | ATAACTGTTGTTGGAGCATC+TGG | - | chr8_3:8856225-8856244 | Msa1274990:intron | 40.0% |
| ! | TAGAAAAGAGCAAAGAGTGC+TGG | + | chr8_3:8856276-8856295 | None:intergenic | 40.0% |
| ACTATCACAATTCAGACCTC+GGG | + | chr8_3:8856312-8856331 | None:intergenic | 40.0% | |
| ! | AGACGGGTTTATAAGTCTGG+GGG | + | chr8_3:8854560-8854579 | None:intergenic | 45.0% |
| ! | GAGACGGGTTTATAAGTCTG+GGG | + | chr8_3:8854561-8854580 | None:intergenic | 45.0% |
| ! | GGAGACGGGTTTATAAGTCT+GGG | + | chr8_3:8854562-8854581 | None:intergenic | 45.0% |
| ! | TGGAGACGGGTTTATAAGTC+TGG | + | chr8_3:8854563-8854582 | None:intergenic | 45.0% |
| ! | GGCCTTATCTCATCCAATAC+GGG | - | chr8_3:8854806-8854825 | Msa1274990:intron | 45.0% |
| GTCCCGTATTGGATGAGATA+AGG | + | chr8_3:8854811-8854830 | None:intergenic | 45.0% | |
| !! | CTGCCGATACCGATTTGTAA+CGG | + | chr8_3:8855118-8855137 | None:intergenic | 45.0% |
| !! | TTACAAATCGGTATCGGCAG+CGG | - | chr8_3:8855118-8855137 | Msa1274990:intron | 45.0% |
| ATATCGCCGTTACAGCGTTA+CGG | - | chr8_3:8855189-8855208 | Msa1274990:intron | 45.0% | |
| ATAGGACAAAACTGCAGGTG+GGG | + | chr8_3:8855515-8855534 | None:intergenic | 45.0% | |
| GGGTGCAGATATGAAAAAGG+GGG | + | chr8_3:8855555-8855574 | None:intergenic | 45.0% | |
| TGGACCACTTGATGCATCAA+GGG | + | chr8_3:8855615-8855634 | None:intergenic | 45.0% | |
| TGGCTCAGCTGGAATAAATC+TGG | + | chr8_3:8855635-8855654 | None:intergenic | 45.0% | |
| GGACGCTGCGATACAAATAA+CGG | + | chr8_3:8856010-8856029 | None:intergenic | 45.0% | |
| CGTTAAGGTTGTCGCGATTT+CGG | + | chr8_3:8856040-8856059 | None:intergenic | 45.0% | |
| !! | ATCCTTCAACTTGTTGAGGC+TGG | + | chr8_3:8856161-8856180 | None:intergenic | 45.0% |
| ! | CTATGAAGATTGGTTACCCG+AGG | - | chr8_3:8856293-8856312 | Msa1274990:intron | 45.0% |
| ! | AGACGGGTTTATAAGTCTGG+GGG | + | chr8_3:8854560-8854579 | None:intergenic | 45.0% |
| ! | GAGACGGGTTTATAAGTCTG+GGG | + | chr8_3:8854561-8854580 | None:intergenic | 45.0% |
| ! | GGAGACGGGTTTATAAGTCT+GGG | + | chr8_3:8854562-8854581 | None:intergenic | 45.0% |
| ! | TGGAGACGGGTTTATAAGTC+TGG | + | chr8_3:8854563-8854582 | None:intergenic | 45.0% |
| ! | GGCCTTATCTCATCCAATAC+GGG | - | chr8_3:8854806-8854825 | Msa1274990:intron | 45.0% |
| GTCCCGTATTGGATGAGATA+AGG | + | chr8_3:8854811-8854830 | None:intergenic | 45.0% | |
| !! | CTGCCGATACCGATTTGTAA+CGG | + | chr8_3:8855118-8855137 | None:intergenic | 45.0% |
| !! | TTACAAATCGGTATCGGCAG+CGG | - | chr8_3:8855118-8855137 | Msa1274990:intron | 45.0% |
| ATATCGCCGTTACAGCGTTA+CGG | - | chr8_3:8855189-8855208 | Msa1274990:intron | 45.0% | |
| ATAGGACAAAACTGCAGGTG+GGG | + | chr8_3:8855515-8855534 | None:intergenic | 45.0% | |
| GGGTGCAGATATGAAAAAGG+GGG | + | chr8_3:8855555-8855574 | None:intergenic | 45.0% | |
| TGGACCACTTGATGCATCAA+GGG | + | chr8_3:8855615-8855634 | None:intergenic | 45.0% | |
| TGGCTCAGCTGGAATAAATC+TGG | + | chr8_3:8855635-8855654 | None:intergenic | 45.0% | |
| GGACGCTGCGATACAAATAA+CGG | + | chr8_3:8856010-8856029 | None:intergenic | 45.0% | |
| CGTTAAGGTTGTCGCGATTT+CGG | + | chr8_3:8856040-8856059 | None:intergenic | 45.0% | |
| !! | ATCCTTCAACTTGTTGAGGC+TGG | + | chr8_3:8856161-8856180 | None:intergenic | 45.0% |
| ! | CTATGAAGATTGGTTACCCG+AGG | - | chr8_3:8856293-8856312 | Msa1274990:intron | 45.0% |
| GGATGTCCAGTCTTGGAAGT+AGG | + | chr8_3:8854624-8854643 | None:intergenic | 50.0% | |
| CACAAGTGGTCCGATAGAAG+TGG | - | chr8_3:8854653-8854672 | Msa1274990:intron | 50.0% | |
| AATCAGTTTGGCCACCCCAT+CGG | + | chr8_3:8854680-8854699 | None:intergenic | 50.0% | |
| ACGGGACGTTACCGCAAAAA+CGG | - | chr8_3:8855092-8855111 | Msa1274990:intron | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | - | chr8_3:8855112-8855131 | Msa1274990:intron | 50.0% | |
| GGACCACTTGATGCATCAAG+GGG | + | chr8_3:8855614-8855633 | None:intergenic | 50.0% | |
| CTGGACCACTTGATGCATCA+AGG | + | chr8_3:8855616-8855635 | None:intergenic | 50.0% | |
| TGTCGCGATTTCGGCTGTAA+CGG | + | chr8_3:8856031-8856050 | None:intergenic | 50.0% | |
| ! | TTGAGGCTGGCCATCTTCTT+TGG | + | chr8_3:8856148-8856167 | None:intergenic | 50.0% |
| TTGCCAGACTCTGAATCCAC+AGG | - | chr8_3:8856189-8856208 | Msa1274990:intron | 50.0% | |
| GATCCTGTGGATTCAGAGTC+TGG | + | chr8_3:8856195-8856214 | None:intergenic | 50.0% | |
| GGATGTCCAGTCTTGGAAGT+AGG | + | chr8_3:8854624-8854643 | None:intergenic | 50.0% | |
| CACAAGTGGTCCGATAGAAG+TGG | - | chr8_3:8854653-8854672 | Msa1274990:intron | 50.0% | |
| AATCAGTTTGGCCACCCCAT+CGG | + | chr8_3:8854680-8854699 | None:intergenic | 50.0% | |
| ACGGGACGTTACCGCAAAAA+CGG | - | chr8_3:8855092-8855111 | Msa1274990:intron | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | - | chr8_3:8855112-8855131 | Msa1274990:intron | 50.0% | |
| GGACCACTTGATGCATCAAG+GGG | + | chr8_3:8855614-8855633 | None:intergenic | 50.0% | |
| CTGGACCACTTGATGCATCA+AGG | + | chr8_3:8855616-8855635 | None:intergenic | 50.0% | |
| TGTCGCGATTTCGGCTGTAA+CGG | + | chr8_3:8856031-8856050 | None:intergenic | 50.0% | |
| ! | TTGAGGCTGGCCATCTTCTT+TGG | + | chr8_3:8856148-8856167 | None:intergenic | 50.0% |
| TTGCCAGACTCTGAATCCAC+AGG | - | chr8_3:8856189-8856208 | Msa1274990:intron | 50.0% | |
| GATCCTGTGGATTCAGAGTC+TGG | + | chr8_3:8856195-8856214 | None:intergenic | 50.0% | |
| ! | ACGCTCTGGATGTCCAGTCT+TGG | + | chr8_3:8854631-8854650 | None:intergenic | 55.0% |
| CATCCAGAGCGTGACACAAG+TGG | - | chr8_3:8854639-8854658 | Msa1274990:intron | 55.0% | |
| TCCGATAGAAGTGGCCCGAT+GGG | - | chr8_3:8854662-8854681 | Msa1274990:intron | 55.0% | |
| ATCAGTTTGGCCACCCCATC+GGG | + | chr8_3:8854679-8854698 | None:intergenic | 55.0% | |
| GGCGTTCCGTAACGCTGTAA+CGG | + | chr8_3:8855198-8855217 | None:intergenic | 55.0% | |
| ACGGCGTTTCACGGTCGTAA+CGG | + | chr8_3:8855219-8855238 | None:intergenic | 55.0% | |
| ACGACCGTGAAACGCCGTTA+CGG | - | chr8_3:8855221-8855240 | Msa1274990:intron | 55.0% | |
| CGGTCAACAAGGAAGGAAGG+AGG | + | chr8_3:8855488-8855507 | None:intergenic | 55.0% | |
| CCTTCCTTCCTTGTTGACCG+CGG | - | chr8_3:8855488-8855507 | Msa1274990:intron | 55.0% | |
| CTTCCTTCCTTGTTGACCGC+GGG | - | chr8_3:8855489-8855508 | Msa1274990:intron | 55.0% | |
| GGACCCCTTGATGCATCAAG+TGG | - | chr8_3:8855608-8855627 | Msa1274990:intron | 55.0% | |
| ! | GGCCAGCCTCAACAAGTTGA+AGG | - | chr8_3:8856156-8856175 | Msa1274990:intron | 55.0% |
| ! | ACGCTCTGGATGTCCAGTCT+TGG | + | chr8_3:8854631-8854650 | None:intergenic | 55.0% |
| CATCCAGAGCGTGACACAAG+TGG | - | chr8_3:8854639-8854658 | Msa1274990:intron | 55.0% | |
| TCCGATAGAAGTGGCCCGAT+GGG | - | chr8_3:8854662-8854681 | Msa1274990:intron | 55.0% | |
| ATCAGTTTGGCCACCCCATC+GGG | + | chr8_3:8854679-8854698 | None:intergenic | 55.0% | |
| GGCGTTCCGTAACGCTGTAA+CGG | + | chr8_3:8855198-8855217 | None:intergenic | 55.0% | |
| ACGGCGTTTCACGGTCGTAA+CGG | + | chr8_3:8855219-8855238 | None:intergenic | 55.0% | |
| ACGACCGTGAAACGCCGTTA+CGG | - | chr8_3:8855221-8855240 | Msa1274990:intron | 55.0% | |
| CGGTCAACAAGGAAGGAAGG+AGG | + | chr8_3:8855488-8855507 | None:intergenic | 55.0% | |
| CCTTCCTTCCTTGTTGACCG+CGG | - | chr8_3:8855488-8855507 | Msa1274990:intron | 55.0% | |
| CTTCCTTCCTTGTTGACCGC+GGG | - | chr8_3:8855489-8855508 | Msa1274990:intron | 55.0% | |
| GGACCCCTTGATGCATCAAG+TGG | - | chr8_3:8855608-8855627 | Msa1274990:intron | 55.0% | |
| ! | GGCCAGCCTCAACAAGTTGA+AGG | - | chr8_3:8856156-8856175 | Msa1274990:intron | 55.0% |
| GGACCACTTGTGTCACGCTC+TGG | + | chr8_3:8854645-8854664 | None:intergenic | 60.0% | |
| GTCCGATAGAAGTGGCCCGA+TGG | - | chr8_3:8854661-8854680 | Msa1274990:intron | 60.0% | |
| CCCCATCGGGCCACTTCTAT+CGG | + | chr8_3:8854666-8854685 | None:intergenic | 60.0% | |
| CCGATAGAAGTGGCCCGATG+GGG | - | chr8_3:8854663-8854682 | Msa1274990:intron | 60.0% | |
| ATAGAAGTGGCCCGATGGGG+TGG | - | chr8_3:8854666-8854685 | Msa1274990:intron | 60.0% | |
| GAGTCCGTAACGGCGTTTCG+CGG | + | chr8_3:8855247-8855266 | None:intergenic | 60.0% | |
| CCGCGGTCAACAAGGAAGGA+AGG | + | chr8_3:8855491-8855510 | None:intergenic | 60.0% | |
| GGACCACTTGTGTCACGCTC+TGG | + | chr8_3:8854645-8854664 | None:intergenic | 60.0% | |
| GTCCGATAGAAGTGGCCCGA+TGG | - | chr8_3:8854661-8854680 | Msa1274990:intron | 60.0% | |
| CCCCATCGGGCCACTTCTAT+CGG | + | chr8_3:8854666-8854685 | None:intergenic | 60.0% | |
| CCGATAGAAGTGGCCCGATG+GGG | - | chr8_3:8854663-8854682 | Msa1274990:intron | 60.0% | |
| ATAGAAGTGGCCCGATGGGG+TGG | - | chr8_3:8854666-8854685 | Msa1274990:intron | 60.0% | |
| GAGTCCGTAACGGCGTTTCG+CGG | + | chr8_3:8855247-8855266 | None:intergenic | 60.0% | |
| CCGCGGTCAACAAGGAAGGA+AGG | + | chr8_3:8855491-8855510 | None:intergenic | 60.0% | |
| GCGGCCGTAACGGCGTTTCA+CGG | + | chr8_3:8855228-8855247 | None:intergenic | 65.0% | |
| ACGGCGTTTCGCGGCCGTAA+CGG | + | chr8_3:8855238-8855257 | None:intergenic | 65.0% | |
| ACGGCCGCGAAACGCCGTTA+CGG | - | chr8_3:8855240-8855259 | Msa1274990:intron | 65.0% | |
| AAAACTGCAGGTGGGGCCCG+CGG | + | chr8_3:8855508-8855527 | None:intergenic | 65.0% | |
| TCGCGATCGCGGTCGCGTTA+AGG | + | chr8_3:8856055-8856074 | None:intergenic | 65.0% | |
| GCGGCCGTAACGGCGTTTCA+CGG | + | chr8_3:8855228-8855247 | None:intergenic | 65.0% | |
| ACGGCGTTTCGCGGCCGTAA+CGG | + | chr8_3:8855238-8855257 | None:intergenic | 65.0% | |
| ACGGCCGCGAAACGCCGTTA+CGG | - | chr8_3:8855240-8855259 | Msa1274990:intron | 65.0% | |
| AAAACTGCAGGTGGGGCCCG+CGG | + | chr8_3:8855508-8855527 | None:intergenic | 65.0% | |
| TCGCGATCGCGGTCGCGTTA+AGG | + | chr8_3:8856055-8856074 | None:intergenic | 65.0% | |
| GGGCCCGCGGTCAACAAGGA+AGG | + | chr8_3:8855495-8855514 | None:intergenic | 70.0% | |
| AACGGTCGCGGTCGCGATCG+CGG | + | chr8_3:8856066-8856085 | None:intergenic | 70.0% | |
| GGGCCCGCGGTCAACAAGGA+AGG | + | chr8_3:8855495-8855514 | None:intergenic | 70.0% | |
| AACGGTCGCGGTCGCGATCG+CGG | + | chr8_3:8856066-8856085 | None:intergenic | 70.0% | |
| GGTGGGGCCCGCGGTCAACA+AGG | + | chr8_3:8855499-8855518 | None:intergenic | 75.0% | |
| GGTGGGGCCCGCGGTCAACA+AGG | + | chr8_3:8855499-8855518 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 8854232 | 8856537 | 8854232 | ID=Msa1274990;Name=Msa1274990 |
| chr8_3 | mRNA | 8854232 | 8856537 | 8854232 | ID=Msa1274990-mRNA-1;Parent=Msa1274990;Name=Msa1274990-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0.5|0.33|3|0|128 |
| chr8_3 | exon | 8856403 | 8856537 | 8856403 | ID=Msa1274990-mRNA-1:exon:3707;Parent=Msa1274990-mRNA-1 |
| chr8_3 | exon | 8854455 | 8854607 | 8854455 | ID=Msa1274990-mRNA-1:exon:3706;Parent=Msa1274990-mRNA-1 |
| chr8_3 | exon | 8854232 | 8854330 | 8854232 | ID=Msa1274990-mRNA-1:exon:3705;Parent=Msa1274990-mRNA-1 |
| chr8_3 | CDS | 8856403 | 8856537 | 8856403 | ID=Msa1274990-mRNA-1:cds;Parent=Msa1274990-mRNA-1 |
| chr8_3 | CDS | 8854455 | 8854607 | 8854455 | ID=Msa1274990-mRNA-1:cds;Parent=Msa1274990-mRNA-1 |
| chr8_3 | CDS | 8854232 | 8854330 | 8854232 | ID=Msa1274990-mRNA-1:cds;Parent=Msa1274990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
