AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1277790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277790 MtrunA17_Chr8g0345981 74.935 774 181 7 18 788 1 764 0.0 1162
Msa1277790 MtrunA17_Chr8g0345991 74.741 772 182 6 18 788 1 760 0.0 1149
Msa1277790 MtrunA17_Chr8g0345961 75.064 778 172 8 18 788 1 763 0.0 1139
Msa1277790 MtrunA17_Chr2g0303881 72.493 738 185 7 56 788 8 732 0.0 1037
Msa1277790 MtrunA17_Chr1g0189251 67.871 775 220 11 18 783 1 755 0.0 1034
Msa1277790 MtrunA17_Chr8g0345971 66.580 772 236 10 18 781 1 758 0.0 1015
Msa1277790 MtrunA17_Chr7g0276151 62.661 774 266 8 17 788 10 762 0.0 929
Msa1277790 MtrunA17_Chr7g0248871 46.883 770 372 17 31 781 12 763 0.0 662
Msa1277790 MtrunA17_Chr1g0189561 47.179 780 380 16 20 786 5 765 0.0 661
Msa1277790 MtrunA17_Chr1g0204321 38.394 797 434 18 20 782 4 777 0.0 537
Msa1277790 MtrunA17_Chr4g0037221 40.470 766 396 18 47 782 33 768 5.55e-174 520
Msa1277790 MtrunA17_Chr7g0262161 40.779 770 399 19 41 782 21 761 1.13e-173 518
Msa1277790 MtrunA17_Chr5g0401511 39.871 775 420 15 24 780 13 759 6.50e-173 516
Msa1277790 MtrunA17_Chr2g0300751 38.403 789 433 17 21 779 5 770 6.58e-173 517
Msa1277790 MtrunA17_Chr4g0053781 40.555 757 397 19 47 782 31 755 8.99e-173 516
Msa1277790 MtrunA17_Chr7g0248861 46.217 608 295 15 47 637 30 622 6.15e-168 507
Msa1277790 MtrunA17_Chr7g0248861 57.613 243 92 4 147 388 627 859 1.48e-72 254
Msa1277790 MtrunA17_Chr4g0020651 39.181 781 424 16 20 779 4 754 3.56e-166 499
Msa1277790 MtrunA17_Chr1g0152771 39.086 788 423 19 17 779 5 760 3.33e-165 496
Msa1277790 MtrunA17_Chr4g0070391 39.517 787 408 21 23 782 7 752 1.04e-164 495
Msa1277790 MtrunA17_Chr8g0344971 38.622 769 405 16 45 782 28 760 1.40e-161 487
Msa1277790 MtrunA17_Chr4g0057061 36.419 821 433 25 1 781 3 774 4.92e-154 468
Msa1277790 MtrunA17_Chr3g0134621 38.812 791 386 23 26 779 4 733 1.78e-153 465
Msa1277790 MtrunA17_Chr8g0344331 38.163 773 420 23 43 785 34 778 3.36e-153 466
Msa1277790 MtrunA17_Chr7g0250411 40.570 737 377 23 91 788 76 790 1.38e-147 452
Msa1277790 MtrunA17_Chr7g0246461 39.191 717 361 17 88 782 77 740 2.66e-146 447
Msa1277790 MtrunA17_Chr4g0076611 38.655 714 394 15 91 781 1 693 2.13e-142 435
Msa1277790 MtrunA17_Chr3g0120521 38.108 719 393 17 91 781 75 769 7.51e-142 436
Msa1277790 MtrunA17_Chr7g0250391 39.615 727 384 22 91 781 75 782 7.73e-140 431
Msa1277790 MtrunA17_Chr5g0398331 37.304 764 393 19 47 781 44 750 1.91e-139 429
Msa1277790 MtrunA17_Chr7g0250331 39.516 744 384 20 91 781 76 806 1.20e-138 429
Msa1277790 MtrunA17_Chr7g0250481 36.654 783 431 21 47 781 32 797 1.22e-138 429
Msa1277790 MtrunA17_Chr7g0250371 37.421 791 425 24 36 781 19 784 1.75e-138 428
Msa1277790 MtrunA17_Chr8g0377961 36.340 776 430 20 42 787 39 780 4.10e-138 427
Msa1277790 MtrunA17_Chr5g0398241 38.201 767 394 23 42 781 40 753 2.95e-136 421
Msa1277790 MtrunA17_Chr4g0057531 39.365 724 390 21 91 785 77 780 9.99e-136 421
Msa1277790 MtrunA17_Chr5g0398401 37.679 767 398 23 42 781 40 753 2.47e-134 416
Msa1277790 MtrunA17_Chr4g0026641 36.835 790 432 25 17 781 6 753 2.66e-134 416
Msa1277790 MtrunA17_Chr5g0407701 36.477 721 401 18 92 788 69 756 1.16e-132 412
Msa1277790 MtrunA17_Chr8g0351011 37.691 719 376 21 91 784 83 754 5.14e-132 410
Msa1277790 MtrunA17_Chr6g0470881 37.262 789 400 28 22 781 7 729 6.31e-132 409
Msa1277790 MtrunA17_Chr4g0057471 37.293 724 394 21 91 781 12 708 7.06e-132 409
Msa1277790 MtrunA17_Chr8g0369891 36.428 711 399 17 92 781 74 752 2.66e-131 408
Msa1277790 MtrunA17_Chr2g0285121 38.147 734 395 21 91 782 67 783 3.61e-131 409
Msa1277790 MtrunA17_Chr5g0398351 37.967 777 382 22 42 781 791 1504 7.88e-131 424
Msa1277790 MtrunA17_Chr5g0398351 37.386 765 392 22 47 781 26 733 5.19e-126 411
Msa1277790 MtrunA17_Chr3g0136151 37.466 734 382 23 91 782 64 762 3.24e-130 405
Msa1277790 MtrunA17_Chr5g0398311 37.139 762 393 21 47 781 44 746 4.68e-129 402
Msa1277790 MtrunA17_Chr7g0227991 34.816 787 428 24 20 781 7 733 1.30e-128 401
Msa1277790 MtrunA17_Chr7g0266051 36.528 720 389 17 91 786 35 710 2.29e-128 399
Msa1277790 MtrunA17_Chr4g0057481 38.484 686 367 18 130 785 33 693 4.75e-128 398
Msa1277790 MtrunA17_Chr1g0146251 35.613 775 392 23 42 781 32 734 2.00e-127 398
Msa1277790 MtrunA17_Chr1g0170081 36.173 763 398 24 43 781 33 730 2.49e-127 397
Msa1277790 MtrunA17_Chr6g0470851 36.250 800 398 30 20 781 4 729 1.12e-126 395
Msa1277790 MtrunA17_Chr2g0285111 37.364 736 395 22 92 782 72 786 9.93e-126 395
Msa1277790 MtrunA17_Chr8g0354771 36.314 738 403 19 82 781 55 763 2.64e-124 390
Msa1277790 MtrunA17_Chr1g0146271 35.188 773 396 25 42 781 32 732 7.26e-123 386
Msa1277790 MtrunA17_Chr4g0057461 39.663 653 338 22 166 785 3 632 1.62e-122 382
Msa1277790 MtrunA17_Chr8g0334521 34.663 802 417 25 16 781 3 733 1.84e-122 385
Msa1277790 MtrunA17_Chr5g0423261 38.794 647 347 18 165 785 2 625 3.04e-122 380
Msa1277790 MtrunA17_Chr3g0079971 36.340 754 403 22 47 781 36 731 1.33e-121 382
Msa1277790 MtrunA17_Chr3g0143251 37.123 730 389 22 91 783 70 766 1.26e-120 381
Msa1277790 MtrunA17_Chr7g0246451 35.645 721 388 20 91 784 77 748 5.05e-120 379
Msa1277790 MtrunA17_Chr4g0057491 38.390 646 349 18 166 785 3 625 1.49e-119 374
Msa1277790 MtrunA17_Chr8g0334491 36.667 720 364 25 91 781 71 727 3.10e-118 374
Msa1277790 MtrunA17_Chr4g0057511 37.402 639 355 19 170 785 3 619 1.10e-112 355
Msa1277790 MtrunA17_Chr8g0354741 36.923 650 345 20 160 781 21 633 2.47e-111 352
Msa1277790 MtrunA17_Chr5g0439271 39.550 622 300 24 206 781 10 601 8.32e-107 340
Msa1277790 MtrunA17_Chr8g0376841 37.127 536 281 14 91 600 78 583 8.62e-94 305
Msa1277790 MtrunA17_Chr4g0071871 31.391 755 424 27 90 780 88 812 6.37e-88 295
Msa1277790 MtrunA17_Chr2g0298601 31.600 750 423 28 92 779 90 811 6.26e-84 284
Msa1277790 MtrunA17_Chr2g0301011 34.159 565 276 17 117 667 1 483 5.79e-78 260
Msa1277790 MtrunA17_Chr5g0447171 35.429 525 251 16 322 781 6 507 6.49e-75 252
Msa1277790 MtrunA17_Chr7g0250441 43.253 289 154 4 502 788 9 289 5.40e-68 227
Msa1277790 MtrunA17_Chr4g0075331 28.972 749 437 23 92 776 15 732 3.46e-67 237
Msa1277790 MtrunA17_Chr8g0380961 28.874 755 445 22 92 781 118 845 5.37e-63 227
Msa1277790 MtrunA17_Chr7g0261701 44.366 284 144 6 499 781 19 289 5.49e-63 213
Msa1277790 MtrunA17_Chr7g0250461 38.686 411 213 16 91 474 76 474 1.43e-62 218
Msa1277790 MtrunA17_Chr2g0302951 29.855 757 436 27 92 781 110 838 2.07e-62 225
Msa1277790 MtrunA17_Chr5g0418921 72.993 137 36 1 494 630 1 136 7.09e-61 203
Msa1277790 MtrunA17_Chr6g0480721 39.937 318 169 6 91 405 5 303 2.66e-59 213
Msa1277790 MtrunA17_Chr6g0480721 41.429 280 143 7 506 781 337 599 3.24e-54 198
Msa1277790 MtrunA17_Chr7g0261691 37.644 348 193 10 154 484 5 345 3.54e-59 204
Msa1277790 MtrunA17_Chr3g0143241 34.450 418 233 12 91 484 70 470 1.21e-55 201
Msa1277790 MtrunA17_Chr8g0346961 74.359 117 30 0 596 712 1 117 4.98e-54 182
Msa1277790 MtrunA17_Chr8g0346361 40.830 289 145 8 501 781 226 496 5.61e-54 194
Msa1277790 MtrunA17_Chr8g0346361 41.872 203 93 4 182 383 7 185 2.98e-36 143
Msa1277790 MtrunA17_Chr4g0026651 39.286 308 146 9 106 382 2 299 1.21e-53 188
Msa1277790 MtrunA17_Chr4g0035881 37.466 363 173 9 241 598 4 317 4.41e-53 187
Msa1277790 MtrunA17_Chr3g0097061 36.585 328 170 7 117 430 1 304 8.19e-53 189
Msa1277790 MtrunA17_Chr3g0097061 47.541 122 54 3 556 677 329 440 1.22e-23 104
Msa1277790 MtrunA17_Chr3g0105451 39.796 294 146 10 498 782 8 279 1.14e-50 179
Msa1277790 MtrunA17_Chr4g0026661 39.231 260 143 6 525 781 12 259 1.74e-49 175
Msa1277790 MtrunA17_Chr2g0312861 40.824 267 127 9 525 781 1 246 8.69e-47 169
Msa1277790 MtrunA17_Chr2g0301031 37.313 268 135 10 525 781 1 246 2.18e-39 146
Msa1277790 MtrunA17_Chr3g0105461 33.535 331 151 7 91 406 69 345 4.57e-39 148
Msa1277790 MtrunA17_Chr7g0248851 51.007 149 68 3 635 781 1 146 6.69e-39 141
Msa1277790 MtrunA17_Chr3g0103061 40.513 195 104 4 91 279 72 260 2.20e-36 138
Msa1277790 MtrunA17_Chr2g0312841 41.026 195 89 5 182 374 12 182 3.30e-35 132
Msa1277790 MtrunA17_Chr2g0301911 31.319 364 203 12 179 528 30 360 5.01e-35 137
Msa1277790 MtrunA17_Chr4g0071191 37.981 208 111 5 506 709 57 250 1.23e-32 127
Msa1277790 MtrunA17_Chr2g0301921 36.818 220 119 6 567 781 1 205 1.98e-32 125
Msa1277790 MtrunA17_Chr3g0103071 37.931 261 143 9 297 540 1 259 3.99e-32 126
Msa1277790 MtrunA17_Chr5g0436021 39.429 175 84 4 204 374 30 186 8.33e-29 114
Msa1277790 MtrunA17_Chr3g0142981 37.989 179 68 3 208 383 32 170 6.77e-27 108
Msa1277790 MtrunA17_Chr8g0376851 34.320 169 104 4 617 781 6 171 3.79e-22 94.4
Msa1277790 MtrunA17_Chr3g0103081 38.255 149 83 5 635 781 1 142 9.18e-22 92.4
Msa1277790 MtrunA17_Chr5g0436031 34.706 170 103 4 615 781 16 180 1.26e-21 94.4
Msa1277790 MtrunA17_Chr2g0301021 27.532 385 154 16 17 390 7 277 1.52e-20 94.7
Msa1277790 MtrunA17_Chr3g0143221 32.759 174 88 6 617 782 11 163 2.59e-16 77.4
Msa1277790 MtrunA17_Chr5g0398341 46.739 92 47 1 567 658 1 90 2.98e-16 75.1
Msa1277790 MtrunA17_Chr3g0143231 47.126 87 44 2 512 598 5 89 2.44e-15 72.0
Msa1277790 MtrunA17_Chr3g0142961 35.115 131 73 4 617 739 11 137 2.09e-14 70.9
Msa1277790 MtrunA17_Chr3g0142971 48.837 86 42 2 509 594 2 85 4.89e-14 68.2
Msa1277790 MtrunA17_Chr3g0143021 36.735 98 62 0 91 188 7 104 5.04e-14 68.9
Msa1277790 MtrunA17_Chr5g0439281 32.787 122 73 3 91 203 73 194 8.79e-14 70.9
Msa1277790 MtrunA17_Chr3g0077671 46.667 75 34 3 558 629 237 308 4.66e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277790 AT5G67090.1 44.156 770 358 21 18 770 1 715 0.0 583
Msa1277790 AT2G05920.1 39.610 770 414 16 36 786 17 754 7.01e-176 524
Msa1277790 AT5G67360.1 40.051 789 411 21 16 782 7 755 1.99e-174 520
Msa1277790 AT4G34980.1 39.523 797 412 22 18 782 1 759 2.01e-169 508
Msa1277790 AT5G51750.1 38.028 781 435 19 31 782 15 775 6.93e-167 502
Msa1277790 AT3G14240.1 40.417 767 402 20 47 782 28 770 2.27e-164 495
Msa1277790 AT1G04110.1 38.306 791 428 21 27 782 6 771 5.90e-164 494
Msa1277790 AT3G14067.1 37.615 763 424 20 45 781 31 767 3.15e-159 482
Msa1277790 AT1G01900.1 40.054 734 401 17 69 782 58 772 2.47e-150 459
Msa1277790 AT2G04160.1 39.197 722 382 19 91 781 75 770 1.10e-144 444
Msa1277790 AT5G59810.1 39.216 714 387 17 91 781 85 774 4.05e-136 422
Msa1277790 AT1G20160.2 37.552 727 390 22 91 783 28 724 4.65e-133 412
Msa1277790 AT1G20160.1 37.552 727 390 22 91 783 67 763 2.26e-132 412
Msa1277790 AT4G00230.1 36.695 714 393 15 90 784 73 746 9.65e-130 404
Msa1277790 AT5G59190.1 38.418 708 366 19 91 780 32 687 2.03e-128 399
Msa1277790 AT5G45650.2 35.162 802 431 25 39 782 19 789 2.44e-128 402
Msa1277790 AT5G45650.1 35.162 802 431 25 39 782 19 789 2.44e-128 402
Msa1277790 AT4G10550.4 38.102 727 386 21 91 783 16 712 6.40e-128 399
Msa1277790 AT4G10550.2 38.102 727 386 21 91 783 16 712 6.40e-128 399
Msa1277790 AT4G10550.3 38.102 727 386 21 91 783 88 784 1.47e-127 400
Msa1277790 AT4G10550.1 38.102 727 386 21 91 783 72 768 1.71e-127 399
Msa1277790 AT1G32960.1 37.637 728 389 20 91 783 70 767 2.63e-126 396
Msa1277790 AT5G03620.1 37.225 728 377 18 92 781 73 758 1.13e-125 394
Msa1277790 AT4G10540.1 36.915 726 401 20 89 783 66 765 1.56e-123 389
Msa1277790 AT5G11940.1 35.443 711 416 15 88 783 72 754 3.20e-123 388
Msa1277790 AT5G58840.1 37.110 706 364 18 90 783 71 708 2.32e-121 381
Msa1277790 AT3G46850.1 34.783 782 431 24 25 781 7 734 2.45e-120 379
Msa1277790 AT4G10510.2 36.000 725 403 20 91 783 1 696 2.94e-119 376
Msa1277790 AT4G10510.4 36.138 725 402 20 91 783 16 711 3.09e-119 376
Msa1277790 AT4G26330.2 36.477 721 408 19 91 781 21 721 4.09e-119 376
Msa1277790 AT4G10510.1 36.000 725 403 20 91 783 60 755 8.57e-119 376
Msa1277790 AT4G10510.3 36.138 725 402 20 91 783 72 767 1.16e-118 376
Msa1277790 AT5G59090.2 35.894 716 375 20 90 781 68 723 7.62e-118 373
Msa1277790 AT5G59090.1 35.944 715 381 20 90 781 68 728 2.15e-117 372
Msa1277790 AT1G32940.4 37.190 726 395 20 91 783 16 713 2.22e-117 371
Msa1277790 AT1G32940.2 37.190 726 395 20 91 783 16 713 2.22e-117 371
Msa1277790 AT5G59100.1 35.944 715 388 18 90 781 70 737 3.47e-117 371
Msa1277790 AT1G32940.1 37.190 726 395 20 91 783 67 764 6.25e-117 372
Msa1277790 AT3G46840.1 34.777 785 434 26 25 785 8 738 6.52e-117 370
Msa1277790 AT4G21630.1 33.960 798 459 23 11 783 1 755 7.64e-117 371
Msa1277790 AT4G10520.1 34.271 782 449 20 24 783 8 746 9.22e-117 370
Msa1277790 AT5G58830.1 37.696 703 361 21 90 781 69 705 9.22e-116 367
Msa1277790 AT5G59090.3 35.944 715 379 21 90 781 68 726 1.46e-115 367
Msa1277790 AT4G26330.1 35.782 735 408 20 91 781 21 735 4.42e-115 366
Msa1277790 AT1G66210.1 34.868 717 411 20 91 788 78 757 2.42e-114 364
Msa1277790 AT5G59130.3 34.945 724 382 16 90 787 32 692 4.12e-114 362
Msa1277790 AT5G59120.1 35.645 721 385 20 90 786 67 732 8.12e-114 362
Msa1277790 AT5G59130.4 34.945 724 382 16 90 787 71 731 1.02e-113 362
Msa1277790 AT1G66220.1 33.145 709 421 14 91 783 75 746 4.59e-113 361
Msa1277790 AT1G20150.1 34.509 794 423 25 44 787 30 776 1.74e-112 360
Msa1277790 AT5G59130.2 34.078 716 389 13 90 787 71 721 1.01e-111 357
Msa1277790 AT4G21640.1 33.207 792 437 19 15 783 7 729 1.23e-111 357
Msa1277790 AT1G32950.2 36.981 722 401 19 91 783 16 712 3.19e-111 355
Msa1277790 AT4G21650.1 35.196 716 409 18 91 783 79 762 3.53e-111 356
Msa1277790 AT4G21326.1 34.844 706 411 13 91 781 16 687 3.59e-111 354
Msa1277790 AT1G32950.1 36.981 722 401 19 91 783 67 763 7.53e-111 355
Msa1277790 AT5G59130.1 34.807 724 379 17 90 787 71 727 1.45e-110 353
Msa1277790 AT5G58820.1 37.143 700 372 21 90 783 65 702 3.47e-110 352
Msa1277790 AT4G10530.1 32.907 781 456 20 22 783 6 737 1.22e-108 349
Msa1277790 AT4G15040.2 34.410 712 391 16 91 783 33 687 2.02e-108 347
Msa1277790 AT4G15040.1 34.410 712 391 16 91 783 33 687 2.02e-108 347
Msa1277790 AT4G21323.1 35.139 720 406 20 87 783 114 795 2.01e-104 339
Msa1277790 AT5G45640.1 33.377 761 384 24 99 782 38 752 4.23e-99 324
Msa1277790 AT1G32970.1 38.699 584 297 19 230 783 172 724 3.47e-94 310
Msa1277790 AT2G39850.1 31.635 746 410 26 91 781 65 765 7.12e-94 310
Msa1277790 AT4G00230.2 37.218 532 293 10 81 598 64 568 3.84e-93 303
Msa1277790 AT5G03620.2 38.764 534 273 12 92 600 73 577 5.89e-93 303
Msa1277790 AT5G58840.3 38.402 513 260 11 90 598 71 531 6.47e-91 296
Msa1277790 AT2G19170.1 31.316 760 423 24 88 780 82 809 2.57e-90 302
Msa1277790 AT2G19170.2 31.316 760 423 24 88 780 82 809 2.57e-90 302
Msa1277790 AT4G30020.3 32.190 758 420 27 88 780 82 810 4.82e-88 296
Msa1277790 AT4G30020.1 32.190 758 420 27 88 780 82 810 4.82e-88 296
Msa1277790 AT4G30020.4 32.190 758 420 27 88 780 82 810 4.82e-88 296
Msa1277790 AT4G30020.2 32.190 758 420 27 88 780 82 810 4.82e-88 296
Msa1277790 AT1G32940.3 37.838 555 294 15 91 614 67 601 3.85e-84 280
Msa1277790 AT4G20430.3 30.749 761 427 25 92 782 119 849 1.08e-77 268
Msa1277790 AT4G20430.1 30.749 761 427 25 92 782 119 849 1.08e-77 268
Msa1277790 AT4G20430.2 31.359 743 422 24 92 782 119 825 1.44e-77 268
Msa1277790 AT5G44530.1 29.947 758 433 20 92 781 106 833 2.66e-74 259
Msa1277790 AT5G44530.2 29.246 783 431 21 92 781 106 858 7.85e-71 249
Msa1277790 AT1G20160.3 36.207 464 246 14 91 526 67 508 4.78e-70 240
Msa1277790 AT1G30600.1 29.762 756 438 26 92 781 98 826 1.19e-69 246
Msa1277790 AT1G62340.1 28.927 764 441 25 92 783 98 831 5.12e-69 244
Msa1277790 AT5G58840.2 35.909 440 229 9 90 526 71 460 2.74e-64 223
Msa1277790 AT5G44530.3 30.040 506 283 11 92 540 106 597 2.30e-46 176
Msa1277790 AT1G32980.1 44.503 191 96 4 563 750 3 186 6.00e-39 143
Msa1277790 AT5G59110.1 35.928 167 89 7 625 781 8 166 3.35e-20 89.0

Find 164 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTAAAACTCTCACTTTC+TGG 0.123218 8_3:-13616687 None:intergenic
CTTATTGAATACCAACTTAT+TGG 0.163433 8_3:-13618377 None:intergenic
TTGGCAATTTCTCCATTTAT+TGG 0.178870 8_3:-13617596 None:intergenic
CTGTGCAACAACAAACTTAT+TGG 0.184359 8_3:+13616783 Msa1277790:CDS
AGTGATCTACAAATTGAAAT+TGG 0.200554 8_3:-13618533 None:intergenic
TCTCTCGGGTTAACATATTT+TGG 0.228694 8_3:+13617665 Msa1277790:CDS
TGGATTCATACCAAGCATTT+TGG 0.252070 8_3:-13616368 None:intergenic
GTCTTTATTAGTCCAATAAA+TGG 0.256298 8_3:+13617584 Msa1277790:CDS
CAAAATAATGAAGTAGCTTT+TGG 0.261973 8_3:+13618451 Msa1277790:CDS
GCATGGCCAGCTTCTGATTA+TGG 0.271365 8_3:+13616624 Msa1277790:CDS
GGTACTTTGGACCGTGAATT+TGG 0.282385 8_3:+13617284 Msa1277790:CDS
TTATTGAATACCAACTTATT+GGG 0.287600 8_3:-13618376 None:intergenic
TGACTCAAATTCCTTCAAAA+TGG 0.291912 8_3:+13616718 Msa1277790:CDS
TCAATATTACTCTCTATCTT+TGG 0.294518 8_3:+13616241 Msa1277790:CDS
GTTACTCTTGATGTATGATT+TGG 0.297234 8_3:-13617615 None:intergenic
GACATACTTTCAATATCATT+AGG 0.306320 8_3:+13617107 Msa1277790:CDS
AACTGTTGCTGCTGGTACTT+TGG 0.311678 8_3:+13617271 Msa1277790:CDS
TATGGCCAAGATGTTATTAT+TGG 0.318032 8_3:+13616642 Msa1277790:CDS
ATGCTCCTTTGTAGGGATTA+AGG 0.321311 8_3:-13616605 None:intergenic
TTTGAATTGTGGTGGCTCTT+TGG 0.329393 8_3:-13616197 None:intergenic
ACCGGTTTGTCTTCCTATAT+AGG 0.347316 8_3:+13617341 Msa1277790:CDS
ACATACTTTCAATATCATTA+GGG 0.353796 8_3:+13617108 Msa1277790:CDS
GTTGACGGTGCGTCATTCTT+TGG 0.353936 8_3:+13616930 Msa1277790:CDS
TCAAAACACTTCTTCAATCA+TGG 0.356150 8_3:+13616215 Msa1277790:CDS
GTGATCTACAAATTGAAATT+GGG 0.357841 8_3:-13618532 None:intergenic
TAACTGTTCTATGAAATTCT+TGG 0.361156 8_3:-13618279 None:intergenic
ATGGCATGCCCTCATGTTGC+TGG 0.376373 8_3:+13617881 Msa1277790:CDS
CCAGGGTCAATTGCTCTGTT+GGG 0.380293 8_3:-13618073 None:intergenic
GAAGAGGTAGGGTTAGGGTT+AGG 0.382028 8_3:-13616426 None:intergenic
ATTGGAGCCCTGCAGCTATT+AGG 0.385368 8_3:+13617936 Msa1277790:CDS
ATCTTAGAAGAGGTAGGGTT+AGG 0.391665 8_3:-13616432 None:intergenic
TCTACTGGAGCAGGTAATAA+TGG 0.391913 8_3:+13617206 Msa1277790:CDS
CCTGGTCTTGTTTATGATGT+TGG 0.393335 8_3:+13618091 Msa1277790:CDS
TGATTGTTCTAAACCTTCCT+TGG 0.393711 8_3:+13618195 Msa1277790:CDS
GGAAGGTTTAGAACAATCAT+TGG 0.393756 8_3:-13618191 None:intergenic
TGAAGAAATATAACCATGTA+AGG 0.396019 8_3:-13616529 None:intergenic
TGAAAGGAGCACATGCTGAT+TGG 0.414531 8_3:+13617918 Msa1277790:CDS
AGCAGAGAAATTTCCTATAT+AGG 0.414918 8_3:-13617354 None:intergenic
TCATTCTTTGGTTATGCAAA+TGG 0.417117 8_3:+13616942 Msa1277790:CDS
AGGGTTAGGATTATTGTTGT+TGG 0.421906 8_3:-13616412 None:intergenic
GTGTCATTGACACTGGTGTT+TGG 0.428926 8_3:+13616664 Msa1277790:CDS
ACACACTCACCACAATTCAT+AGG 0.431468 8_3:+13616582 Msa1277790:CDS
AAACCAGCACCTAGGGTTGA+TGG 0.438991 8_3:+13617692 Msa1277790:CDS
ACATACACCAATGTTATGAA+TGG 0.439500 8_3:+13616462 Msa1277790:CDS
ATATCAGGTTTCAACACATA+TGG 0.439686 8_3:-13617746 None:intergenic
AAGGGTGTGTTTGTGTCTAC+TGG 0.440723 8_3:+13617191 Msa1277790:CDS
AGCTACAAGTTGAGGATTGA+AGG 0.441780 8_3:+13618415 Msa1277790:CDS
GCTAGCATTACGCCTGTTGA+AGG 0.442795 8_3:+13618334 Msa1277790:CDS
GTACCAGGAGCTGTAATATC+AGG 0.442984 8_3:-13617761 None:intergenic
TGACCAGCTCCTTGTGCAAA+AGG 0.444735 8_3:-13618043 None:intergenic
AGCTGGCCATGCTCCTTTGT+AGG 0.446749 8_3:-13616613 None:intergenic
ATGTTGGAAATGCTTCTTCA+AGG 0.448290 8_3:+13618251 Msa1277790:CDS
GCAGATGAAACTACATCTGC+AGG 0.448561 8_3:-13617026 None:intergenic
AGAAGTTTCAAGTGTGTGTC+AGG 0.450697 8_3:-13616555 None:intergenic
ACATATGGACAGCTATTTGA+TGG 0.451466 8_3:-13617731 None:intergenic
GACAATTGTTGAACTAATGT+TGG 0.458686 8_3:-13616844 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 8_3:+13618289 Msa1277790:CDS
CACACTTCAACAACAGCAGC+TGG 0.460137 8_3:+13616900 Msa1277790:CDS
TTGAGGGCTTCATGCTCTTG+AGG 0.461264 8_3:-13616504 None:intergenic
CCTGTGTTAATTCTTGAGTC+TGG 0.461981 8_3:+13617815 Msa1277790:CDS
ACCAGGGTCAATTGCTCTGT+TGG 0.462089 8_3:-13618074 None:intergenic
ATGTTTCAAGCAAATGTTGT+TGG 0.470137 8_3:+13617497 Msa1277790:CDS
AGTAATTACTTGATAAAGAG+TGG 0.472344 8_3:-13616388 None:intergenic
TCTTAGAAGAGGTAGGGTTA+GGG 0.473883 8_3:-13616431 None:intergenic
ATTGTTGACCTAATAGCTGC+AGG 0.482257 8_3:-13617944 None:intergenic
GCTGGCCATGCTCCTTTGTA+GGG 0.484657 8_3:-13616612 None:intergenic
CTCATAAAAGACATTGGAAA+AGG 0.484935 8_3:+13618004 Msa1277790:CDS
CTTTCAATATCATTAGGGTT+CGG 0.485572 8_3:+13617113 Msa1277790:CDS
ATATTAGAAACTTGATCAGT+TGG 0.485721 8_3:-13617476 None:intergenic
ATTAACACAGGTACATTTGT+GGG 0.487421 8_3:-13617803 None:intergenic
CTAACACGGTATCCTTCAAC+AGG 0.489929 8_3:-13618346 None:intergenic
TGCAATTGATGCCGCAGTAT+CGG 0.500686 8_3:+13617076 Msa1277790:CDS
TCCTATATAGGAAGACAAAC+CGG 0.500889 8_3:-13617342 None:intergenic
ACAATTGTTGAACTAATGTT+GGG 0.502752 8_3:-13616843 None:intergenic
AAAGTAGCTATGTACAAGGT+TGG 0.502850 8_3:+13616993 Msa1277790:CDS
TCAACGGCAAACATGTCTCT+CGG 0.505007 8_3:+13617650 Msa1277790:CDS
TGGTACTAAACCAGCACCTA+GGG 0.513286 8_3:+13617685 Msa1277790:CDS
GTTACATCACATGGCAGGAT+GGG 0.515946 8_3:+13618473 Msa1277790:CDS
CAGGGTCAATTGCTCTGTTG+GGG 0.518214 8_3:-13618072 None:intergenic
TGACACCAATAATAACATCT+TGG 0.518487 8_3:-13616647 None:intergenic
TAAGTATCCCACCAAATTCA+CGG 0.520946 8_3:-13617295 None:intergenic
CAACGGCAAACATGTCTCTC+GGG 0.524554 8_3:+13617651 Msa1277790:CDS
AGAAGCTAAGCTACAAGTTG+AGG 0.531800 8_3:+13618407 Msa1277790:CDS
GGGATACTTACACTTGGTAA+TGG 0.534998 8_3:+13617308 Msa1277790:CDS
TGCCCTCATGTTGCTGGTGT+AGG 0.535967 8_3:+13617887 Msa1277790:CDS
AAACCTGATATTACAGCTCC+TGG 0.538191 8_3:+13617758 Msa1277790:CDS
AGACATATTTGATAATACTA+AGG 0.538939 8_3:+13617979 Msa1277790:CDS
TTGATGCCGCAGTATCGGAC+GGG 0.539594 8_3:+13617081 Msa1277790:CDS
CTTACTCCAACCAAAATGCT+TGG 0.539869 8_3:+13616358 Msa1277790:CDS
ACAACAAACTTATTGGAGCT+AGG 0.544940 8_3:+13616790 Msa1277790:CDS
CAAAGTGAAGAGCAAGATTG+TGG 0.546284 8_3:+13617430 Msa1277790:CDS
ATTATTGGTGTCATTGACAC+TGG 0.549325 8_3:+13616657 Msa1277790:CDS
GTGTTTGTGTCTACTGGAGC+AGG 0.550762 8_3:+13617197 Msa1277790:CDS
TATTGAATACCAACTTATTG+GGG 0.551614 8_3:-13618375 None:intergenic
TGATCTACAAATTGAAATTG+GGG 0.552684 8_3:-13618531 None:intergenic
AATTAACACAGGTACATTTG+TGG 0.554055 8_3:-13617804 None:intergenic
TAGTGTTATCCCCAATAAGT+TGG 0.554558 8_3:+13618366 Msa1277790:CDS
CTTTGGACCGTGAATTTGGT+GGG 0.554951 8_3:+13617288 Msa1277790:CDS
AGCTTGTCCCTCACCAACAT+TGG 0.555610 8_3:-13618302 None:intergenic
AAGGAACTCATAAAAGACAT+TGG 0.557100 8_3:+13617998 Msa1277790:CDS
CCAACATCATAAACAAGACC+AGG 0.558341 8_3:-13618091 None:intergenic
TGTTGTTGCACAGAGATGAA+TGG 0.560568 8_3:-13616773 None:intergenic
TGTTCTATGAAATTCTTGGA+TGG 0.563635 8_3:-13618275 None:intergenic
TGTATAAATGATCTTAGAAG+AGG 0.565477 8_3:-13616442 None:intergenic
GGTTACATCACATGGCAGGA+TGG 0.566321 8_3:+13618472 Msa1277790:CDS
TATGCAAATGGAAGCGCAAG+AGG 0.566938 8_3:+13616954 Msa1277790:CDS
TAGCTATGTACAAGGTTGGA+TGG 0.570141 8_3:+13616997 Msa1277790:CDS
TAACCATCAACCCTAGGTGC+TGG 0.571495 8_3:-13617695 None:intergenic
ATTGATGCCGCAGTATCGGA+CGG 0.574206 8_3:+13617080 Msa1277790:CDS
ATTGGAAGAAGATCTTGTAA+TGG 0.574725 8_3:-13618173 None:intergenic
ACTAAAACCATTCATAACAT+TGG 0.575372 8_3:-13616469 None:intergenic
TAACTCTAACTCGGTTTCAA+CGG 0.576691 8_3:+13617634 Msa1277790:CDS
TCTTGGCCATAATCAGAAGC+TGG 0.576702 8_3:-13616630 None:intergenic
GCAGCTGGGAATCAAGTTGA+CGG 0.577538 8_3:+13616915 Msa1277790:CDS
CAAATTCCTTCAAAATGGAA+AGG 0.578000 8_3:+13616723 Msa1277790:CDS
TTTCAAGCAAATGTTGTTGG+AGG 0.580213 8_3:+13617500 Msa1277790:CDS
GTTGATGGTTATAGTTCAAG+AGG 0.581688 8_3:+13617707 Msa1277790:CDS
GCAATTAGATCTTCATACAA+AGG 0.581894 8_3:-13617143 None:intergenic
TTTCAACAAAGGATTCTTGG+CGG 0.582198 8_3:+13616815 Msa1277790:CDS
GAAGCCCTCAAAACCTTACA+TGG 0.582672 8_3:+13616516 Msa1277790:CDS
AACAGTTACCAATGTTGGTG+AGG 0.584570 8_3:+13618294 Msa1277790:CDS
TGGGTGACAACTGTTGCTGC+TGG 0.585861 8_3:+13617263 Msa1277790:CDS
GTCAACCCCGTCCGATACTG+CGG 0.586783 8_3:-13617087 None:intergenic
GCTTAGCAATGAAGCACCAT+GGG 0.587542 8_3:+13617244 Msa1277790:CDS
ACACGTGACACAGATGGTCA+TGG 0.589620 8_3:+13616873 Msa1277790:CDS
AAATGATCTTAGAAGAGGTA+GGG 0.589932 8_3:-13616437 None:intergenic
CATCAAGAGTAACTCTAACT+CGG 0.590851 8_3:+13617625 Msa1277790:CDS
TTGGTACTAAACCAGCACCT+AGG 0.592056 8_3:+13617684 Msa1277790:CDS
GGTAATGGAGTCTCACTCAC+CGG 0.593516 8_3:+13617323 Msa1277790:CDS
TAAATGATCTTAGAAGAGGT+AGG 0.594636 8_3:-13616438 None:intergenic
GAACTATAACCATCAACCCT+AGG 0.596091 8_3:-13617701 None:intergenic
TTTGGTGGGATACTTACACT+TGG 0.597224 8_3:+13617302 Msa1277790:CDS
AGAAGGGTAATTAAGATCCA+AGG 0.600433 8_3:-13618212 None:intergenic
CACGTGACACAGATGGTCAT+GGG 0.602226 8_3:+13616874 Msa1277790:CDS
ACTTTGGACCGTGAATTTGG+TGG 0.602825 8_3:+13617287 Msa1277790:CDS
ATTGGACTAATAAAGACGGA+TGG 0.604019 8_3:-13617578 None:intergenic
GGATTAAGGCCTATGAATTG+TGG 0.606055 8_3:-13616591 None:intergenic
ATTTATTGGACTAATAAAGA+CGG 0.611338 8_3:-13617582 None:intergenic
GTCTAAAGTAGCTATGTACA+AGG 0.613437 8_3:+13616989 Msa1277790:CDS
AGCTTAGCAATGAAGCACCA+TGG 0.619584 8_3:+13617243 Msa1277790:CDS
ATAGGCCTTAATCCCTACAA+AGG 0.619854 8_3:+13616600 Msa1277790:CDS
ACAGTTACCAATGTTGGTGA+GGG 0.621956 8_3:+13618295 Msa1277790:CDS
GCAGCAACAGTTGTCACCCA+TGG 0.625596 8_3:-13617260 None:intergenic
TTGTTGACCTAATAGCTGCA+GGG 0.626607 8_3:-13617943 None:intergenic
GCTCCTACACCAGCAACATG+AGG 0.628455 8_3:-13617890 None:intergenic
TTAATCCCTACAAAGGAGCA+TGG 0.631440 8_3:+13616607 Msa1277790:CDS
ACACTTCAACAACAGCAGCT+GGG 0.634517 8_3:+13616901 Msa1277790:CDS
GGGTAATTAAGATCCAAGGA+AGG 0.636054 8_3:-13618208 None:intergenic
TGATGCCGCAGTATCGGACG+GGG 0.636121 8_3:+13617082 Msa1277790:CDS
CAGATGAAACTACATCTGCA+GGG 0.637600 8_3:-13617025 None:intergenic
GAGCAAGATTGTGGTTTGTG+AGG 0.641293 8_3:+13617439 Msa1277790:CDS
CTCCTACACCAGCAACATGA+GGG 0.641334 8_3:-13617889 None:intergenic
AATAGCACACGTGACACAGA+TGG 0.645445 8_3:+13616867 Msa1277790:CDS
CCCAACAGAGCAATTGACCC+TGG 0.657581 8_3:+13618073 Msa1277790:CDS
TTGATGGTTATAGTTCAAGA+GGG 0.663601 8_3:+13617708 Msa1277790:CDS
GTTGCACAGAGATGAATGGT+TGG 0.665235 8_3:-13616769 None:intergenic
GAAGCTAAGATTGATGTACC+AGG 0.668272 8_3:-13617776 None:intergenic
GAAGTGAAGACTTGTAACAC+AGG 0.672285 8_3:-13616268 None:intergenic
TGTGGTGAGAAGCCCTATTG+TGG 0.672366 8_3:+13618501 Msa1277790:CDS
TATTGGGGATAACACTAACA+CGG 0.699300 8_3:-13618360 None:intergenic
GATCTACAAATTGAAATTGG+GGG 0.717780 8_3:-13618530 None:intergenic
CCAGACTCAAGAATTAACAC+AGG 0.725464 8_3:-13617815 None:intergenic
CAACATCATAAACAAGACCA+GGG 0.726316 8_3:-13618090 None:intergenic
ATGGCAGGATGGGAAGCATG+TGG 0.747934 8_3:+13618483 Msa1277790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTCAAATTGTTTTCA+TGG + chr8_3:13617379-13617398 Msa1277790:CDS 15.0%
!!! TAATTTTCAAATTGTTTTCA+TGG + chr8_3:13617379-13617398 Msa1277790:CDS 15.0%
!!! AGTGAGAGTTTTAATAATAA+TGG + chr8_3:13616693-13616712 Msa1277790:CDS 20.0%
!! ACATACTTTCAATATCATTA+GGG + chr8_3:13617108-13617127 Msa1277790:CDS 20.0%
!! ATTTATTGGACTAATAAAGA+CGG - chr8_3:13617585-13617604 None:intergenic 20.0%
!!! AACAAGTTTAATGTTTTAAG+TGG + chr8_3:13617851-13617870 Msa1277790:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG + chr8_3:13617979-13617998 Msa1277790:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG - chr8_3:13618231-13618250 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG - chr8_3:13618232-13618251 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG + chr8_3:13618235-13618254 Msa1277790:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG - chr8_3:13618379-13618398 None:intergenic 20.0%
!!! AGTGAGAGTTTTAATAATAA+TGG + chr8_3:13616693-13616712 Msa1277790:CDS 20.0%
!! ACATACTTTCAATATCATTA+GGG + chr8_3:13617108-13617127 Msa1277790:CDS 20.0%
!! ATTTATTGGACTAATAAAGA+CGG - chr8_3:13617585-13617604 None:intergenic 20.0%
!!! AACAAGTTTAATGTTTTAAG+TGG + chr8_3:13617851-13617870 Msa1277790:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG + chr8_3:13617979-13617998 Msa1277790:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG - chr8_3:13618231-13618250 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG - chr8_3:13618232-13618251 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG + chr8_3:13618235-13618254 Msa1277790:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG - chr8_3:13618379-13618398 None:intergenic 20.0%
! TCAATATTACTCTCTATCTT+TGG + chr8_3:13616241-13616260 Msa1277790:CDS 25.0%
! AGTAATTACTTGATAAAGAG+TGG - chr8_3:13616391-13616410 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG - chr8_3:13616445-13616464 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG - chr8_3:13616472-13616491 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG - chr8_3:13616532-13616551 None:intergenic 25.0%
! TTATTAAAACTCTCACTTTC+TGG - chr8_3:13616690-13616709 None:intergenic 25.0%
! ACAATTGTTGAACTAATGTT+GGG - chr8_3:13616846-13616865 None:intergenic 25.0%
! GACATACTTTCAATATCATT+AGG + chr8_3:13617107-13617126 Msa1277790:CDS 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG - chr8_3:13617233-13617252 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG - chr8_3:13617234-13617253 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG - chr8_3:13617479-13617498 None:intergenic 25.0%
! GTCTTTATTAGTCCAATAAA+TGG + chr8_3:13617584-13617603 Msa1277790:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG - chr8_3:13618282-13618301 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG - chr8_3:13618378-13618397 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG - chr8_3:13618380-13618399 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG - chr8_3:13618441-13618460 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG - chr8_3:13618442-13618461 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG + chr8_3:13618451-13618470 Msa1277790:CDS 25.0%
! TCAATATTACTCTCTATCTT+TGG + chr8_3:13616241-13616260 Msa1277790:CDS 25.0%
! AGTAATTACTTGATAAAGAG+TGG - chr8_3:13616391-13616410 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG - chr8_3:13616445-13616464 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG - chr8_3:13616472-13616491 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG - chr8_3:13616532-13616551 None:intergenic 25.0%
! TTATTAAAACTCTCACTTTC+TGG - chr8_3:13616690-13616709 None:intergenic 25.0%
! ACAATTGTTGAACTAATGTT+GGG - chr8_3:13616846-13616865 None:intergenic 25.0%
! GACATACTTTCAATATCATT+AGG + chr8_3:13617107-13617126 Msa1277790:CDS 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG - chr8_3:13617233-13617252 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG - chr8_3:13617234-13617253 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG - chr8_3:13617479-13617498 None:intergenic 25.0%
! GTCTTTATTAGTCCAATAAA+TGG + chr8_3:13617584-13617603 Msa1277790:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG - chr8_3:13618282-13618301 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG - chr8_3:13618378-13618397 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG - chr8_3:13618380-13618399 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG - chr8_3:13618441-13618460 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG - chr8_3:13618442-13618461 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG + chr8_3:13618451-13618470 Msa1277790:CDS 25.0%
!!! TGAAGAAGTGTTTTGAATTG+TGG - chr8_3:13616211-13616230 None:intergenic 30.0%
TCAAAACACTTCTTCAATCA+TGG + chr8_3:13616215-13616234 Msa1277790:CDS 30.0%
! TCTTCACTTCATTTTCACAA+TGG + chr8_3:13616281-13616300 Msa1277790:CDS 30.0%
AAATGATCTTAGAAGAGGTA+GGG - chr8_3:13616440-13616459 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG - chr8_3:13616441-13616460 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG + chr8_3:13616462-13616481 Msa1277790:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG - chr8_3:13616523-13616542 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG - chr8_3:13616524-13616543 None:intergenic 30.0%
TATGGCCAAGATGTTATTAT+TGG + chr8_3:13616642-13616661 Msa1277790:CDS 30.0%
TGACACCAATAATAACATCT+TGG - chr8_3:13616650-13616669 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG + chr8_3:13616718-13616737 Msa1277790:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG + chr8_3:13616723-13616742 Msa1277790:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG + chr8_3:13616812-13616831 Msa1277790:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG - chr8_3:13616847-13616866 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG + chr8_3:13616942-13616961 Msa1277790:CDS 30.0%
CTTTCAATATCATTAGGGTT+CGG + chr8_3:13617113-13617132 Msa1277790:CDS 30.0%
GCAATTAGATCTTCATACAA+AGG - chr8_3:13617146-13617165 None:intergenic 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG - chr8_3:13617232-13617251 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG - chr8_3:13617357-13617376 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG + chr8_3:13617497-13617516 Msa1277790:CDS 30.0%
TTGGCAATTTCTCCATTTAT+TGG - chr8_3:13617599-13617618 None:intergenic 30.0%
GTTACTCTTGATGTATGATT+TGG - chr8_3:13617618-13617637 None:intergenic 30.0%
! TTGATGGTTATAGTTCAAGA+GGG + chr8_3:13617708-13617727 Msa1277790:CDS 30.0%
ATATCAGGTTTCAACACATA+TGG - chr8_3:13617749-13617768 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG - chr8_3:13617806-13617825 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG - chr8_3:13617807-13617826 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG + chr8_3:13617862-13617881 Msa1277790:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG + chr8_3:13617998-13618017 Msa1277790:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG + chr8_3:13618004-13618023 Msa1277790:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG - chr8_3:13618176-13618195 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG - chr8_3:13618278-13618297 None:intergenic 30.0%
!!! TGAAGAAGTGTTTTGAATTG+TGG - chr8_3:13616211-13616230 None:intergenic 30.0%
TCAAAACACTTCTTCAATCA+TGG + chr8_3:13616215-13616234 Msa1277790:CDS 30.0%
! TCTTCACTTCATTTTCACAA+TGG + chr8_3:13616281-13616300 Msa1277790:CDS 30.0%
AAATGATCTTAGAAGAGGTA+GGG - chr8_3:13616440-13616459 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG - chr8_3:13616441-13616460 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG + chr8_3:13616462-13616481 Msa1277790:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG - chr8_3:13616523-13616542 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG - chr8_3:13616524-13616543 None:intergenic 30.0%
TATGGCCAAGATGTTATTAT+TGG + chr8_3:13616642-13616661 Msa1277790:CDS 30.0%
TGACACCAATAATAACATCT+TGG - chr8_3:13616650-13616669 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG + chr8_3:13616718-13616737 Msa1277790:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG + chr8_3:13616723-13616742 Msa1277790:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG + chr8_3:13616812-13616831 Msa1277790:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG - chr8_3:13616847-13616866 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG + chr8_3:13616942-13616961 Msa1277790:CDS 30.0%
CTTTCAATATCATTAGGGTT+CGG + chr8_3:13617113-13617132 Msa1277790:CDS 30.0%
GCAATTAGATCTTCATACAA+AGG - chr8_3:13617146-13617165 None:intergenic 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG - chr8_3:13617232-13617251 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG - chr8_3:13617357-13617376 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG + chr8_3:13617497-13617516 Msa1277790:CDS 30.0%
TTGGCAATTTCTCCATTTAT+TGG - chr8_3:13617599-13617618 None:intergenic 30.0%
GTTACTCTTGATGTATGATT+TGG - chr8_3:13617618-13617637 None:intergenic 30.0%
! TTGATGGTTATAGTTCAAGA+GGG + chr8_3:13617708-13617727 Msa1277790:CDS 30.0%
ATATCAGGTTTCAACACATA+TGG - chr8_3:13617749-13617768 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG - chr8_3:13617806-13617825 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG - chr8_3:13617807-13617826 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG + chr8_3:13617862-13617881 Msa1277790:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG + chr8_3:13617998-13618017 Msa1277790:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG + chr8_3:13618004-13618023 Msa1277790:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG - chr8_3:13618176-13618195 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG - chr8_3:13618278-13618297 None:intergenic 30.0%
!!! AGAAGTGTTTTGAATTGTGG+TGG - chr8_3:13616208-13616227 None:intergenic 35.0%
!! TTTTGGTTGGAGTAAGGTTT+TGG - chr8_3:13616354-13616373 None:intergenic 35.0%
!! TTCATACCAAGCATTTTGGT+TGG - chr8_3:13616367-13616386 None:intergenic 35.0%
! TGGATTCATACCAAGCATTT+TGG - chr8_3:13616371-13616390 None:intergenic 35.0%
AGGGTTAGGATTATTGTTGT+TGG - chr8_3:13616415-13616434 None:intergenic 35.0%
!! ATTATTGGTGTCATTGACAC+TGG + chr8_3:13616657-13616676 Msa1277790:CDS 35.0%
! AACTTGCCTTTCCATTTTGA+AGG - chr8_3:13616732-13616751 None:intergenic 35.0%
CTGTGCAACAACAAACTTAT+TGG + chr8_3:13616783-13616802 Msa1277790:CDS 35.0%
ACAACAAACTTATTGGAGCT+AGG + chr8_3:13616790-13616809 Msa1277790:CDS 35.0%
TTTCAACAAAGGATTCTTGG+CGG + chr8_3:13616815-13616834 Msa1277790:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG + chr8_3:13616989-13617008 Msa1277790:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG + chr8_3:13616993-13617012 Msa1277790:CDS 35.0%
! TCTTTTGCAGCTATGGAAAA+GGG + chr8_3:13617173-13617192 Msa1277790:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG - chr8_3:13617298-13617317 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG - chr8_3:13617345-13617364 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG + chr8_3:13617449-13617468 Msa1277790:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG + chr8_3:13617500-13617519 Msa1277790:CDS 35.0%
ATTGGACTAATAAAGACGGA+TGG - chr8_3:13617581-13617600 None:intergenic 35.0%
CATCAAGAGTAACTCTAACT+CGG + chr8_3:13617625-13617644 Msa1277790:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG + chr8_3:13617634-13617653 Msa1277790:CDS 35.0%
! TCTCTCGGGTTAACATATTT+TGG + chr8_3:13617665-13617684 Msa1277790:CDS 35.0%
!! GTTGATGGTTATAGTTCAAG+AGG + chr8_3:13617707-13617726 Msa1277790:CDS 35.0%
ACATATGGACAGCTATTTGA+TGG - chr8_3:13617734-13617753 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG - chr8_3:13618093-13618112 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG - chr8_3:13618194-13618213 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG + chr8_3:13618195-13618214 Msa1277790:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG - chr8_3:13618215-13618234 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG + chr8_3:13618251-13618270 Msa1277790:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG + chr8_3:13618289-13618308 Msa1277790:CDS 35.0%
TATTGGGGATAACACTAACA+CGG - chr8_3:13618363-13618382 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG + chr8_3:13618366-13618385 Msa1277790:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG + chr8_3:13618464-13618483 Msa1277790:CDS 35.0%
!!! AGAAGTGTTTTGAATTGTGG+TGG - chr8_3:13616208-13616227 None:intergenic 35.0%
!! TTTTGGTTGGAGTAAGGTTT+TGG - chr8_3:13616354-13616373 None:intergenic 35.0%
!! TTCATACCAAGCATTTTGGT+TGG - chr8_3:13616367-13616386 None:intergenic 35.0%
! TGGATTCATACCAAGCATTT+TGG - chr8_3:13616371-13616390 None:intergenic 35.0%
AGGGTTAGGATTATTGTTGT+TGG - chr8_3:13616415-13616434 None:intergenic 35.0%
!! ATTATTGGTGTCATTGACAC+TGG + chr8_3:13616657-13616676 Msa1277790:CDS 35.0%
! AACTTGCCTTTCCATTTTGA+AGG - chr8_3:13616732-13616751 None:intergenic 35.0%
CTGTGCAACAACAAACTTAT+TGG + chr8_3:13616783-13616802 Msa1277790:CDS 35.0%
ACAACAAACTTATTGGAGCT+AGG + chr8_3:13616790-13616809 Msa1277790:CDS 35.0%
TTTCAACAAAGGATTCTTGG+CGG + chr8_3:13616815-13616834 Msa1277790:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG + chr8_3:13616989-13617008 Msa1277790:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG + chr8_3:13616993-13617012 Msa1277790:CDS 35.0%
! TCTTTTGCAGCTATGGAAAA+GGG + chr8_3:13617173-13617192 Msa1277790:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG - chr8_3:13617298-13617317 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG - chr8_3:13617345-13617364 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG + chr8_3:13617449-13617468 Msa1277790:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG + chr8_3:13617500-13617519 Msa1277790:CDS 35.0%
ATTGGACTAATAAAGACGGA+TGG - chr8_3:13617581-13617600 None:intergenic 35.0%
CATCAAGAGTAACTCTAACT+CGG + chr8_3:13617625-13617644 Msa1277790:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG + chr8_3:13617634-13617653 Msa1277790:CDS 35.0%
! TCTCTCGGGTTAACATATTT+TGG + chr8_3:13617665-13617684 Msa1277790:CDS 35.0%
!! GTTGATGGTTATAGTTCAAG+AGG + chr8_3:13617707-13617726 Msa1277790:CDS 35.0%
ACATATGGACAGCTATTTGA+TGG - chr8_3:13617734-13617753 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG - chr8_3:13618093-13618112 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG - chr8_3:13618194-13618213 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG + chr8_3:13618195-13618214 Msa1277790:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG - chr8_3:13618215-13618234 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG + chr8_3:13618251-13618270 Msa1277790:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG + chr8_3:13618289-13618308 Msa1277790:CDS 35.0%
TATTGGGGATAACACTAACA+CGG - chr8_3:13618363-13618382 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG + chr8_3:13618366-13618385 Msa1277790:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG + chr8_3:13618464-13618483 Msa1277790:CDS 35.0%
TTTGAATTGTGGTGGCTCTT+TGG - chr8_3:13616200-13616219 None:intergenic 40.0%
GAAGTGAAGACTTGTAACAC+AGG - chr8_3:13616271-13616290 None:intergenic 40.0%
!!! CAAGCATTTTGGTTGGAGTA+AGG - chr8_3:13616360-13616379 None:intergenic 40.0%
CTTACTCCAACCAAAATGCT+TGG + chr8_3:13616358-13616377 Msa1277790:CDS 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG - chr8_3:13616434-13616453 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG - chr8_3:13616435-13616454 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG - chr8_3:13616558-13616577 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG + chr8_3:13616582-13616601 Msa1277790:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG - chr8_3:13616594-13616613 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG + chr8_3:13616600-13616619 Msa1277790:CDS 40.0%
ATGCTCCTTTGTAGGGATTA+AGG - chr8_3:13616608-13616627 None:intergenic 40.0%
TTAATCCCTACAAAGGAGCA+TGG + chr8_3:13616607-13616626 Msa1277790:CDS 40.0%
TGTTGTTGCACAGAGATGAA+TGG - chr8_3:13616776-13616795 None:intergenic 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG + chr8_3:13616804-13616823 Msa1277790:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG + chr8_3:13616997-13617016 Msa1277790:CDS 40.0%
CAGATGAAACTACATCTGCA+GGG - chr8_3:13617028-13617047 None:intergenic 40.0%
! AATAGCCTCTTTTGCAGCTA+TGG + chr8_3:13617166-13617185 Msa1277790:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+AGG - chr8_3:13617174-13617193 None:intergenic 40.0%
! CTCTTTTGCAGCTATGGAAA+AGG + chr8_3:13617172-13617191 Msa1277790:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG + chr8_3:13617206-13617225 Msa1277790:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG + chr8_3:13617302-13617321 Msa1277790:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG + chr8_3:13617308-13617327 Msa1277790:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG + chr8_3:13617341-13617360 Msa1277790:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG + chr8_3:13617430-13617449 Msa1277790:CDS 40.0%
GAACTATAACCATCAACCCT+AGG - chr8_3:13617704-13617723 None:intergenic 40.0%
AAACCTGATATTACAGCTCC+TGG + chr8_3:13617758-13617777 Msa1277790:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG - chr8_3:13617779-13617798 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG - chr8_3:13617818-13617837 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG + chr8_3:13617815-13617834 Msa1277790:CDS 40.0%
TTGTTGACCTAATAGCTGCA+GGG - chr8_3:13617946-13617965 None:intergenic 40.0%
ATTGTTGACCTAATAGCTGC+AGG - chr8_3:13617947-13617966 None:intergenic 40.0%
CCAACATCATAAACAAGACC+AGG - chr8_3:13618094-13618113 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG + chr8_3:13618091-13618110 Msa1277790:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG - chr8_3:13618211-13618230 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG + chr8_3:13618294-13618313 Msa1277790:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG + chr8_3:13618295-13618314 Msa1277790:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG + chr8_3:13618407-13618426 Msa1277790:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG + chr8_3:13618415-13618434 Msa1277790:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG + chr8_3:13618468-13618487 Msa1277790:CDS 40.0%
TTTGAATTGTGGTGGCTCTT+TGG - chr8_3:13616200-13616219 None:intergenic 40.0%
GAAGTGAAGACTTGTAACAC+AGG - chr8_3:13616271-13616290 None:intergenic 40.0%
!!! CAAGCATTTTGGTTGGAGTA+AGG - chr8_3:13616360-13616379 None:intergenic 40.0%
CTTACTCCAACCAAAATGCT+TGG + chr8_3:13616358-13616377 Msa1277790:CDS 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG - chr8_3:13616434-13616453 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG - chr8_3:13616435-13616454 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG - chr8_3:13616558-13616577 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG + chr8_3:13616582-13616601 Msa1277790:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG - chr8_3:13616594-13616613 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG + chr8_3:13616600-13616619 Msa1277790:CDS 40.0%
ATGCTCCTTTGTAGGGATTA+AGG - chr8_3:13616608-13616627 None:intergenic 40.0%
TTAATCCCTACAAAGGAGCA+TGG + chr8_3:13616607-13616626 Msa1277790:CDS 40.0%
TGTTGTTGCACAGAGATGAA+TGG - chr8_3:13616776-13616795 None:intergenic 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG + chr8_3:13616804-13616823 Msa1277790:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG + chr8_3:13616997-13617016 Msa1277790:CDS 40.0%
CAGATGAAACTACATCTGCA+GGG - chr8_3:13617028-13617047 None:intergenic 40.0%
! AATAGCCTCTTTTGCAGCTA+TGG + chr8_3:13617166-13617185 Msa1277790:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+AGG - chr8_3:13617174-13617193 None:intergenic 40.0%
! CTCTTTTGCAGCTATGGAAA+AGG + chr8_3:13617172-13617191 Msa1277790:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG + chr8_3:13617206-13617225 Msa1277790:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG + chr8_3:13617302-13617321 Msa1277790:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG + chr8_3:13617308-13617327 Msa1277790:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG + chr8_3:13617341-13617360 Msa1277790:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG + chr8_3:13617430-13617449 Msa1277790:CDS 40.0%
GAACTATAACCATCAACCCT+AGG - chr8_3:13617704-13617723 None:intergenic 40.0%
AAACCTGATATTACAGCTCC+TGG + chr8_3:13617758-13617777 Msa1277790:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG - chr8_3:13617779-13617798 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG - chr8_3:13617818-13617837 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG + chr8_3:13617815-13617834 Msa1277790:CDS 40.0%
TTGTTGACCTAATAGCTGCA+GGG - chr8_3:13617946-13617965 None:intergenic 40.0%
ATTGTTGACCTAATAGCTGC+AGG - chr8_3:13617947-13617966 None:intergenic 40.0%
CCAACATCATAAACAAGACC+AGG - chr8_3:13618094-13618113 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG + chr8_3:13618091-13618110 Msa1277790:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG - chr8_3:13618211-13618230 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG + chr8_3:13618294-13618313 Msa1277790:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG + chr8_3:13618295-13618314 Msa1277790:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG + chr8_3:13618407-13618426 Msa1277790:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG + chr8_3:13618415-13618434 Msa1277790:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG + chr8_3:13618468-13618487 Msa1277790:CDS 40.0%
GAAGCCCTCAAAACCTTACA+TGG + chr8_3:13616516-13616535 Msa1277790:CDS 45.0%
TCTTGGCCATAATCAGAAGC+TGG - chr8_3:13616633-13616652 None:intergenic 45.0%
! GTGTCATTGACACTGGTGTT+TGG + chr8_3:13616664-13616683 Msa1277790:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG - chr8_3:13616772-13616791 None:intergenic 45.0%
AATAGCACACGTGACACAGA+TGG + chr8_3:13616867-13616886 Msa1277790:CDS 45.0%
ACACTTCAACAACAGCAGCT+GGG + chr8_3:13616901-13616920 Msa1277790:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG + chr8_3:13616954-13616973 Msa1277790:CDS 45.0%
GCAGATGAAACTACATCTGC+AGG - chr8_3:13617029-13617048 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG + chr8_3:13617076-13617095 Msa1277790:CDS 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG + chr8_3:13617191-13617210 Msa1277790:CDS 45.0%
! AGCTTAGCAATGAAGCACCA+TGG + chr8_3:13617243-13617262 Msa1277790:CDS 45.0%
! GCTTAGCAATGAAGCACCAT+GGG + chr8_3:13617244-13617263 Msa1277790:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG + chr8_3:13617271-13617290 Msa1277790:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG + chr8_3:13617284-13617303 Msa1277790:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG + chr8_3:13617287-13617306 Msa1277790:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG + chr8_3:13617288-13617307 Msa1277790:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG + chr8_3:13617439-13617458 Msa1277790:CDS 45.0%
TCAACGGCAAACATGTCTCT+CGG + chr8_3:13617650-13617669 Msa1277790:CDS 45.0%
TTGGTACTAAACCAGCACCT+AGG + chr8_3:13617684-13617703 Msa1277790:CDS 45.0%
TGGTACTAAACCAGCACCTA+GGG + chr8_3:13617685-13617704 Msa1277790:CDS 45.0%
GTACCAGGAGCTGTAATATC+AGG - chr8_3:13617764-13617783 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG + chr8_3:13617902-13617921 Msa1277790:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG + chr8_3:13617918-13617937 Msa1277790:CDS 45.0%
! GTAGCAACACCTTTTGCACA+AGG + chr8_3:13618034-13618053 Msa1277790:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG - chr8_3:13618349-13618368 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG + chr8_3:13618473-13618492 Msa1277790:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG - chr8_3:13618516-13618535 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG - chr8_3:13618517-13618536 None:intergenic 45.0%
GAAGCCCTCAAAACCTTACA+TGG + chr8_3:13616516-13616535 Msa1277790:CDS 45.0%
TCTTGGCCATAATCAGAAGC+TGG - chr8_3:13616633-13616652 None:intergenic 45.0%
! GTGTCATTGACACTGGTGTT+TGG + chr8_3:13616664-13616683 Msa1277790:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG - chr8_3:13616772-13616791 None:intergenic 45.0%
AATAGCACACGTGACACAGA+TGG + chr8_3:13616867-13616886 Msa1277790:CDS 45.0%
ACACTTCAACAACAGCAGCT+GGG + chr8_3:13616901-13616920 Msa1277790:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG + chr8_3:13616954-13616973 Msa1277790:CDS 45.0%
GCAGATGAAACTACATCTGC+AGG - chr8_3:13617029-13617048 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG + chr8_3:13617076-13617095 Msa1277790:CDS 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG + chr8_3:13617191-13617210 Msa1277790:CDS 45.0%
! AGCTTAGCAATGAAGCACCA+TGG + chr8_3:13617243-13617262 Msa1277790:CDS 45.0%
! GCTTAGCAATGAAGCACCAT+GGG + chr8_3:13617244-13617263 Msa1277790:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG + chr8_3:13617271-13617290 Msa1277790:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG + chr8_3:13617284-13617303 Msa1277790:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG + chr8_3:13617287-13617306 Msa1277790:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG + chr8_3:13617288-13617307 Msa1277790:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG + chr8_3:13617439-13617458 Msa1277790:CDS 45.0%
TCAACGGCAAACATGTCTCT+CGG + chr8_3:13617650-13617669 Msa1277790:CDS 45.0%
TTGGTACTAAACCAGCACCT+AGG + chr8_3:13617684-13617703 Msa1277790:CDS 45.0%
TGGTACTAAACCAGCACCTA+GGG + chr8_3:13617685-13617704 Msa1277790:CDS 45.0%
GTACCAGGAGCTGTAATATC+AGG - chr8_3:13617764-13617783 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG + chr8_3:13617902-13617921 Msa1277790:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG + chr8_3:13617918-13617937 Msa1277790:CDS 45.0%
! GTAGCAACACCTTTTGCACA+AGG + chr8_3:13618034-13618053 Msa1277790:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG - chr8_3:13618349-13618368 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG + chr8_3:13618473-13618492 Msa1277790:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG - chr8_3:13618516-13618535 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG - chr8_3:13618517-13618536 None:intergenic 45.0%
GAAGAGGTAGGGTTAGGGTT+AGG - chr8_3:13616429-13616448 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG - chr8_3:13616507-13616526 None:intergenic 50.0%
GCATGGCCAGCTTCTGATTA+TGG + chr8_3:13616624-13616643 Msa1277790:CDS 50.0%
ACACGTGACACAGATGGTCA+TGG + chr8_3:13616873-13616892 Msa1277790:CDS 50.0%
CACGTGACACAGATGGTCAT+GGG + chr8_3:13616874-13616893 Msa1277790:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG + chr8_3:13616900-13616919 Msa1277790:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG + chr8_3:13616915-13616934 Msa1277790:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG + chr8_3:13616930-13616949 Msa1277790:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG + chr8_3:13617080-13617099 Msa1277790:CDS 50.0%
GTGTTTGTGTCTACTGGAGC+AGG + chr8_3:13617197-13617216 Msa1277790:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG + chr8_3:13617323-13617342 Msa1277790:CDS 50.0%
CAACGGCAAACATGTCTCTC+GGG + chr8_3:13617651-13617670 Msa1277790:CDS 50.0%
AAACCAGCACCTAGGGTTGA+TGG + chr8_3:13617692-13617711 Msa1277790:CDS 50.0%
TAACCATCAACCCTAGGTGC+TGG - chr8_3:13617698-13617717 None:intergenic 50.0%
CTCCTACACCAGCAACATGA+GGG - chr8_3:13617892-13617911 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG + chr8_3:13617936-13617955 Msa1277790:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG + chr8_3:13618040-13618059 Msa1277790:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG - chr8_3:13618046-13618065 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG - chr8_3:13618075-13618094 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG - chr8_3:13618076-13618095 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG - chr8_3:13618077-13618096 None:intergenic 50.0%
AGCTTGTCCCTCACCAACAT+TGG - chr8_3:13618305-13618324 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG + chr8_3:13618334-13618353 Msa1277790:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG + chr8_3:13618472-13618491 Msa1277790:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG + chr8_3:13618501-13618520 Msa1277790:CDS 50.0%
GAAGAGGTAGGGTTAGGGTT+AGG - chr8_3:13616429-13616448 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG - chr8_3:13616507-13616526 None:intergenic 50.0%
GCATGGCCAGCTTCTGATTA+TGG + chr8_3:13616624-13616643 Msa1277790:CDS 50.0%
ACACGTGACACAGATGGTCA+TGG + chr8_3:13616873-13616892 Msa1277790:CDS 50.0%
CACGTGACACAGATGGTCAT+GGG + chr8_3:13616874-13616893 Msa1277790:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG + chr8_3:13616900-13616919 Msa1277790:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG + chr8_3:13616915-13616934 Msa1277790:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG + chr8_3:13616930-13616949 Msa1277790:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG + chr8_3:13617080-13617099 Msa1277790:CDS 50.0%
GTGTTTGTGTCTACTGGAGC+AGG + chr8_3:13617197-13617216 Msa1277790:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG + chr8_3:13617323-13617342 Msa1277790:CDS 50.0%
CAACGGCAAACATGTCTCTC+GGG + chr8_3:13617651-13617670 Msa1277790:CDS 50.0%
AAACCAGCACCTAGGGTTGA+TGG + chr8_3:13617692-13617711 Msa1277790:CDS 50.0%
TAACCATCAACCCTAGGTGC+TGG - chr8_3:13617698-13617717 None:intergenic 50.0%
CTCCTACACCAGCAACATGA+GGG - chr8_3:13617892-13617911 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG + chr8_3:13617936-13617955 Msa1277790:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG + chr8_3:13618040-13618059 Msa1277790:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG - chr8_3:13618046-13618065 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG - chr8_3:13618075-13618094 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG - chr8_3:13618076-13618095 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG - chr8_3:13618077-13618096 None:intergenic 50.0%
AGCTTGTCCCTCACCAACAT+TGG - chr8_3:13618305-13618324 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG + chr8_3:13618334-13618353 Msa1277790:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG + chr8_3:13618472-13618491 Msa1277790:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG + chr8_3:13618501-13618520 Msa1277790:CDS 50.0%
GCTGGCCATGCTCCTTTGTA+GGG - chr8_3:13616615-13616634 None:intergenic 55.0%
AGCTGGCCATGCTCCTTTGT+AGG - chr8_3:13616616-13616635 None:intergenic 55.0%
! TTGATGCCGCAGTATCGGAC+GGG + chr8_3:13617081-13617100 Msa1277790:CDS 55.0%
GCAGCAACAGTTGTCACCCA+TGG - chr8_3:13617263-13617282 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG + chr8_3:13617263-13617282 Msa1277790:CDS 55.0%
ATGGCATGCCCTCATGTTGC+TGG + chr8_3:13617881-13617900 Msa1277790:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG + chr8_3:13617887-13617906 Msa1277790:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG - chr8_3:13617893-13617912 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG + chr8_3:13618073-13618092 Msa1277790:CDS 55.0%
! ATGGCAGGATGGGAAGCATG+TGG + chr8_3:13618483-13618502 Msa1277790:CDS 55.0%
GCTGGCCATGCTCCTTTGTA+GGG - chr8_3:13616615-13616634 None:intergenic 55.0%
AGCTGGCCATGCTCCTTTGT+AGG - chr8_3:13616616-13616635 None:intergenic 55.0%
! TTGATGCCGCAGTATCGGAC+GGG + chr8_3:13617081-13617100 Msa1277790:CDS 55.0%
GCAGCAACAGTTGTCACCCA+TGG - chr8_3:13617263-13617282 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG + chr8_3:13617263-13617282 Msa1277790:CDS 55.0%
ATGGCATGCCCTCATGTTGC+TGG + chr8_3:13617881-13617900 Msa1277790:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG + chr8_3:13617887-13617906 Msa1277790:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG - chr8_3:13617893-13617912 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG + chr8_3:13618073-13618092 Msa1277790:CDS 55.0%
! ATGGCAGGATGGGAAGCATG+TGG + chr8_3:13618483-13618502 Msa1277790:CDS 55.0%
! TGATGCCGCAGTATCGGACG+GGG + chr8_3:13617082-13617101 Msa1277790:CDS 60.0%
GTCAACCCCGTCCGATACTG+CGG - chr8_3:13617090-13617109 None:intergenic 60.0%
! TGATGCCGCAGTATCGGACG+GGG + chr8_3:13617082-13617101 Msa1277790:CDS 60.0%
GTCAACCCCGTCCGATACTG+CGG - chr8_3:13617090-13617109 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 13616183 13618549 13616183 ID=Msa1277790;Name=Msa1277790
chr8_3 mRNA 13616183 13618549 13616183 ID=Msa1277790-mRNA-1;Parent=Msa1277790;Name=Msa1277790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|788
chr8_3 exon 13616183 13618549 13616183 ID=Msa1277790-mRNA-1:exon:5345;Parent=Msa1277790-mRNA-1
chr8_3 CDS 13616183 13618549 13616183 ID=Msa1277790-mRNA-1:cds;Parent=Msa1277790-mRNA-1
Gene Sequence

>Msa1277790

ATGTTCAGAAGAAACCAAAGAGCCACCACAATTCAAAACACTTCTTCAATCATGGCTTTCAATATTACTCTCTATCTTTGGTTTTCCTGTGTTACAAGTCTTCACTTCATTTTCACAATGGCTCACTCTTCTCATAACTATATCATTCATATGAATTTATCTGCTATGCCAAAACCTTACTCCAACCAAAATGCTTGGTATGAATCCACTCTTTATCAAGTAATTACTACCAACAACAATAATCCTAACCCTAACCCTACCTCTTCTAAGATCATTTATACATACACCAATGTTATGAATGGTTTTAGTGCTAATCTCTCACCTCAAGAGCATGAAGCCCTCAAAACCTTACATGGTTATATTTCTTCACAACCTGACACACACTTGAAACTTCTCACAACACACTCACCACAATTCATAGGCCTTAATCCCTACAAAGGAGCATGGCCAGCTTCTGATTATGGCCAAGATGTTATTATTGGTGTCATTGACACTGGTGTTTGGCCAGAAAGTGAGAGTTTTAATAATAATGGAATGACTCAAATTCCTTCAAAATGGAAAGGCAAGTTATGTCAATTTGAAAATACCAACCATTCATCTCTGTGCAACAACAAACTTATTGGAGCTAGGTTTTTCAACAAAGGATTCTTGGCGGTAAATCCCAACATTAGTTCAACAATTGTCAATAGCACACGTGACACAGATGGTCATGGGACACACACTTCAACAACAGCAGCTGGGAATCAAGTTGACGGTGCGTCATTCTTTGGTTATGCAAATGGAAGCGCAAGAGGAATAGCTACATTGTCTAAAGTAGCTATGTACAAGGTTGGATGGACGAACCCTGCAGATGTAGTTTCATCTGCATATGTAGTTTCATCTGATGTATTAGCTGCAATTGATGCCGCAGTATCGGACGGGGTTGACATACTTTCAATATCATTAGGGTTCGGCAGTCTACCTTTGTATGAAGATCTAATTGCAATAGCCTCTTTTGCAGCTATGGAAAAGGGTGTGTTTGTGTCTACTGGAGCAGGTAATAATGGCCCCTTCTTTAAAAAGCTTAGCAATGAAGCACCATGGGTGACAACTGTTGCTGCTGGTACTTTGGACCGTGAATTTGGTGGGATACTTACACTTGGTAATGGAGTCTCACTCACCGGTTTGTCTTCCTATATAGGAAATTTCTCTGCTAGTAATTTTCAAATTGTTTTCATGGATATGTGTGAAAATGTTACAGAATTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAGGATAAAAATGGAGATCCAACTGATCAAGTTTCTAATATGTTTCAAGCAAATGTTGTTGGAGGTGTTTTCATATCAAATATCACAGAAATAAATGATATGATTTTAGACTTGAATTTTCCATCCGTCTTTATTAGTCCAATAAATGGAGAAATTGCCAAATCATACATCAAGAGTAACTCTAACTCGGTTTCAACGGCAAACATGTCTCTCGGGTTAACATATTTTGGTACTAAACCAGCACCTAGGGTTGATGGTTATAGTTCAAGAGGGCCATCAAATAGCTGTCCATATGTGTTGAAACCTGATATTACAGCTCCTGGTACATCAATCTTAGCTTCATATCCCACAAATGTACCTGTGTTAATTCTTGAGTCTGGTAATAAAGTCTTCAACAAGTTTAATGTTTTAAGTGGAACATCTATGGCATGCCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCACATGCTGATTGGAGCCCTGCAGCTATTAGGTCAACAATGATGACAACATCAGACATATTTGATAATACTAAGGAACTCATAAAAGACATTGGAAAAGGTAACAACGTAGCAACACCTTTTGCACAAGGAGCTGGTCATATCAACCCCAACAGAGCAATTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGTTCTAAACCTTCCTTGGATCTTAATTACCCTTCTTTTATAGCTTTTTTCAATGTTGGAAATGCTTCTTCAAGGACCATCCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGACAAGCTATTTATGTTGCTAGCATTACGCCTGTTGAAGGATACCGTGTTAGTGTTATCCCCAATAAGTTGGTATTCAATAAGAAGAGTGAGAAGCTAAGCTACAAGTTGAGGATTGAAGGCCCTAGAATGACACAAAATAATGAAGTAGCTTTTGGTTACATCACATGGCAGGATGGGAAGCATGTGGTGAGAAGCCCTATTGTGGTAACTACCCCCAATTTCAATTTGTAG
Protein sequence

>Msa1277790

MFRRNQRATTIQNTSSIMAFNITLYLWFSCVTSLHFIFTMAHSSHNYIIHMNLSAMPKPYSNQNAWYESTLYQVITTNNNNPNPNPTSSKIIYTYTNVMNGFSANLSPQEHEALKTLHGYISSQPDTHLKLLTTHSPQFIGLNPYKGAWPASDYGQDVIIGVIDTGVWPESESFNNNGMTQIPSKWKGKLCQFENTNHSSLCNNKLIGARFFNKGFLAVNPNISSTIVNSTRDTDGHGTHTSTTAAGNQVDGASFFGYANGSARGIATLSKVAMYKVGWTNPADVVSSAYVVSSDVLAAIDAAVSDGVDILSISLGFGSLPLYEDLIAIASFAAMEKGVFVSTGAGNNGPFFKKLSNEAPWVTTVAAGTLDREFGGILTLGNGVSLTGLSSYIGNFSASNFQIVFMDMCENVTELIKVKSKIVVCEDKNGDPTDQVSNMFQANVVGGVFISNITEINDMILDLNFPSVFISPINGEIAKSYIKSNSNSVSTANMSLGLTYFGTKPAPRVDGYSSRGPSNSCPYVLKPDITAPGTSILASYPTNVPVLILESGNKVFNKFNVLSGTSMACPHVAGVGALLKGAHADWSPAAIRSTMMTTSDIFDNTKELIKDIGKGNNVATPFAQGAGHINPNRAIDPGLVYDVGVQDYVNLLCALNFTQKNITTITRSSSNDCSKPSLDLNYPSFIAFFNVGNASSRTIQEFHRTVTNVGEGQAIYVASITPVEGYRVSVIPNKLVFNKKSEKLSYKLRIEGPRMTQNNEVAFGYITWQDGKHVVRSPIVVTTPNFNL*