AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1316670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316670 MtrunA17_Chr8g0345981 75.665 752 170 7 1 749 23 764 0.0 1136
Msa1316670 MtrunA17_Chr8g0345991 76.273 746 165 5 5 749 26 760 0.0 1132
Msa1316670 MtrunA17_Chr8g0345961 75.931 752 160 7 5 749 26 763 0.0 1113
Msa1316670 MtrunA17_Chr2g0303881 73.306 738 179 7 17 749 8 732 0.0 1039
Msa1316670 MtrunA17_Chr1g0189251 69.612 747 198 11 7 744 29 755 0.0 1019
Msa1316670 MtrunA17_Chr8g0345971 68.231 746 215 10 5 742 27 758 0.0 1000
Msa1316670 MtrunA17_Chr7g0276151 64.698 745 248 7 7 749 31 762 0.0 926
Msa1316670 MtrunA17_Chr7g0248871 48.069 751 357 15 8 742 30 763 0.0 669
Msa1316670 MtrunA17_Chr1g0189561 48.148 756 362 15 3 747 29 765 0.0 663
Msa1316670 MtrunA17_Chr4g0037221 41.330 767 388 18 8 743 33 768 5.82e-179 531
Msa1316670 MtrunA17_Chr1g0204321 39.136 764 414 17 8 743 37 777 1.65e-177 527
Msa1316670 MtrunA17_Chr4g0053781 41.293 758 390 20 8 743 31 755 1.52e-175 521
Msa1316670 MtrunA17_Chr7g0262161 40.519 770 401 19 2 743 21 761 4.97e-174 518
Msa1316670 MtrunA17_Chr5g0401511 41.090 752 397 15 8 741 36 759 9.10e-174 517
Msa1316670 MtrunA17_Chr2g0300751 39.113 767 418 16 4 740 23 770 5.88e-173 516
Msa1316670 MtrunA17_Chr7g0248861 46.382 608 294 15 8 598 30 622 5.24e-170 511
Msa1316670 MtrunA17_Chr7g0248861 58.436 243 90 4 108 349 627 859 3.45e-73 254
Msa1316670 MtrunA17_Chr4g0020651 40.239 753 400 15 8 740 32 754 1.35e-166 499
Msa1316670 MtrunA17_Chr1g0152771 39.529 764 411 16 2 740 23 760 2.17e-165 496
Msa1316670 MtrunA17_Chr4g0070391 39.869 765 387 21 8 743 32 752 8.33e-165 494
Msa1316670 MtrunA17_Chr8g0344971 38.882 769 403 16 6 743 28 760 9.12e-163 489
Msa1316670 MtrunA17_Chr3g0134621 39.895 762 376 20 3 740 30 733 2.26e-157 474
Msa1316670 MtrunA17_Chr8g0344331 38.789 776 411 24 4 746 34 778 1.04e-155 471
Msa1316670 MtrunA17_Chr4g0057061 38.714 762 391 24 8 742 62 774 6.70e-155 469
Msa1316670 MtrunA17_Chr7g0250411 40.921 738 373 24 52 749 76 790 3.16e-150 457
Msa1316670 MtrunA17_Chr7g0246461 39.082 719 359 17 49 743 77 740 7.45e-146 444
Msa1316670 MtrunA17_Chr4g0076611 38.796 714 393 15 52 742 1 693 2.78e-142 434
Msa1316670 MtrunA17_Chr5g0398241 38.722 767 390 23 3 742 40 753 8.77e-142 434
Msa1316670 MtrunA17_Chr7g0250481 36.862 784 428 23 8 742 32 797 2.96e-141 434
Msa1316670 MtrunA17_Chr5g0398331 37.581 769 384 20 8 742 44 750 1.49e-140 431
Msa1316670 MtrunA17_Chr7g0250391 39.118 726 389 21 52 742 75 782 3.62e-140 431
Msa1316670 MtrunA17_Chr5g0398401 38.201 767 394 23 3 742 40 753 7.79e-140 429
Msa1316670 MtrunA17_Chr3g0120521 37.552 719 397 17 52 742 75 769 7.84e-140 430
Msa1316670 MtrunA17_Chr7g0250331 39.113 744 387 20 52 742 76 806 4.99e-139 429
Msa1316670 MtrunA17_Chr7g0250371 37.564 780 425 25 3 742 27 784 9.18e-139 427
Msa1316670 MtrunA17_Chr8g0377961 37.689 727 396 18 52 748 81 780 7.09e-137 422
Msa1316670 MtrunA17_Chr4g0057531 39.862 725 385 21 52 746 77 780 2.05e-136 421
Msa1316670 MtrunA17_Chr4g0026641 37.927 762 412 24 7 742 27 753 2.13e-136 421
Msa1316670 MtrunA17_Chr5g0407701 36.515 723 398 18 53 749 69 756 3.16e-135 417
Msa1316670 MtrunA17_Chr7g0227991 36.207 754 403 22 8 742 39 733 1.73e-134 415
Msa1316670 MtrunA17_Chr8g0351011 37.796 717 378 20 52 745 83 754 2.12e-134 415
Msa1316670 MtrunA17_Chr7g0266051 37.274 719 385 17 52 747 35 710 3.82e-134 413
Msa1316670 MtrunA17_Chr5g0398351 38.224 777 380 22 3 742 791 1504 5.36e-134 432
Msa1316670 MtrunA17_Chr5g0398351 37.778 765 389 22 8 742 26 733 6.41e-131 423
Msa1316670 MtrunA17_Chr4g0057471 37.431 724 393 21 52 742 12 708 4.80e-133 410
Msa1316670 MtrunA17_Chr1g0146251 36.541 769 393 21 3 742 32 734 7.89e-133 410
Msa1316670 MtrunA17_Chr8g0369891 36.045 713 399 17 53 742 74 752 4.03e-132 409
Msa1316670 MtrunA17_Chr6g0470881 37.810 767 388 27 1 742 27 729 6.86e-132 408
Msa1316670 MtrunA17_Chr2g0285121 38.147 734 395 21 52 743 67 783 3.98e-130 405
Msa1316670 MtrunA17_Chr1g0170081 36.697 763 394 23 4 742 33 730 1.86e-129 402
Msa1316670 MtrunA17_Chr1g0146271 36.576 771 388 25 3 742 32 732 2.56e-129 401
Msa1316670 MtrunA17_Chr5g0398311 36.925 761 396 19 8 742 44 746 4.77e-129 401
Msa1316670 MtrunA17_Chr6g0470851 37.286 759 386 27 8 742 37 729 5.09e-129 400
Msa1316670 MtrunA17_Chr3g0136151 37.193 734 384 22 52 743 64 762 6.51e-129 401
Msa1316670 MtrunA17_Chr4g0057481 38.338 686 368 18 91 746 33 693 4.08e-128 397
Msa1316670 MtrunA17_Chr3g0079971 37.351 755 394 23 8 742 36 731 7.66e-128 397
Msa1316670 MtrunA17_Chr8g0354771 36.450 738 402 19 43 742 55 763 3.13e-127 397
Msa1316670 MtrunA17_Chr8g0334521 35.948 765 399 22 3 742 35 733 6.46e-127 395
Msa1316670 MtrunA17_Chr4g0057461 40.276 653 334 22 127 746 3 632 7.05e-126 389
Msa1316670 MtrunA17_Chr2g0285111 37.500 736 394 22 53 743 72 786 2.57e-125 392
Msa1316670 MtrunA17_Chr7g0246451 35.922 721 386 18 52 745 77 748 2.72e-123 386
Msa1316670 MtrunA17_Chr5g0423261 38.794 647 347 18 126 746 2 625 1.13e-122 380
Msa1316670 MtrunA17_Chr8g0334491 36.806 720 363 25 52 742 71 727 1.25e-121 381
Msa1316670 MtrunA17_Chr4g0057491 38.640 647 346 19 127 746 3 625 5.35e-120 374
Msa1316670 MtrunA17_Chr3g0143251 37.260 730 388 23 52 744 70 766 2.07e-119 376
Msa1316670 MtrunA17_Chr4g0057511 38.665 644 340 23 131 746 3 619 3.97e-114 358
Msa1316670 MtrunA17_Chr8g0354741 36.713 651 345 20 121 742 21 633 1.62e-113 357
Msa1316670 MtrunA17_Chr5g0439271 39.165 623 301 25 167 742 10 601 3.80e-106 337
Msa1316670 MtrunA17_Chr8g0376841 37.500 536 279 14 52 561 78 583 2.70e-95 308
Msa1316670 MtrunA17_Chr4g0071871 31.432 754 425 28 51 741 88 812 6.12e-91 302
Msa1316670 MtrunA17_Chr2g0298601 31.467 750 424 28 53 740 90 811 5.81e-86 289
Msa1316670 MtrunA17_Chr2g0301011 35.044 565 271 17 78 628 1 483 6.97e-81 267
Msa1316670 MtrunA17_Chr5g0447171 35.619 525 250 16 283 742 6 507 9.34e-76 253
Msa1316670 MtrunA17_Chr7g0250441 43.599 289 153 4 463 749 9 289 8.28e-69 229
Msa1316670 MtrunA17_Chr4g0075331 28.705 749 439 26 53 737 15 732 1.02e-68 240
Msa1316670 MtrunA17_Chr2g0302951 30.383 757 432 27 53 742 110 838 3.17e-67 238
Msa1316670 MtrunA17_Chr8g0380961 29.272 755 442 22 53 742 118 845 9.04e-67 237
Msa1316670 MtrunA17_Chr7g0250461 38.631 409 216 15 52 435 76 474 3.90e-64 222
Msa1316670 MtrunA17_Chr7g0261701 44.718 284 143 6 460 742 19 289 6.22e-64 215
Msa1316670 MtrunA17_Chr5g0418921 73.723 137 35 1 455 591 1 136 2.64e-62 206
Msa1316670 MtrunA17_Chr6g0480721 39.937 318 169 6 52 366 5 303 1.55e-60 215
Msa1316670 MtrunA17_Chr6g0480721 41.786 280 142 7 467 742 337 599 8.41e-55 199
Msa1316670 MtrunA17_Chr7g0261691 46.862 239 118 5 115 351 5 236 7.46e-60 206
Msa1316670 MtrunA17_Chr3g0143241 34.597 422 227 12 52 445 70 470 8.99e-58 206
Msa1316670 MtrunA17_Chr8g0346361 40.816 294 148 8 457 742 221 496 1.07e-54 196
Msa1316670 MtrunA17_Chr8g0346361 42.365 203 92 4 143 344 7 185 2.57e-38 149
Msa1316670 MtrunA17_Chr8g0346961 74.359 117 30 0 557 673 1 117 3.28e-54 182
Msa1316670 MtrunA17_Chr3g0097061 36.890 328 169 7 78 391 1 304 3.52e-54 193
Msa1316670 MtrunA17_Chr3g0097061 47.541 122 54 3 517 638 329 440 3.50e-24 106
Msa1316670 MtrunA17_Chr4g0026651 39.159 309 145 9 67 343 2 299 6.59e-54 188
Msa1316670 MtrunA17_Chr3g0105451 39.796 294 146 10 459 743 8 279 4.09e-52 182
Msa1316670 MtrunA17_Chr4g0035881 36.364 363 177 9 202 559 4 317 4.11e-52 184
Msa1316670 MtrunA17_Chr4g0026661 39.615 260 142 6 486 742 12 259 2.52e-50 177
Msa1316670 MtrunA17_Chr2g0312861 41.199 267 126 9 486 742 1 246 2.43e-47 170
Msa1316670 MtrunA17_Chr2g0301031 37.313 268 135 10 486 742 1 246 5.49e-40 147
Msa1316670 MtrunA17_Chr7g0248851 51.007 149 68 3 596 742 1 146 5.14e-39 141
Msa1316670 MtrunA17_Chr2g0312841 41.753 194 89 5 143 335 12 182 6.23e-37 137
Msa1316670 MtrunA17_Chr3g0103061 40.513 195 104 4 52 240 72 260 1.10e-36 139
Msa1316670 MtrunA17_Chr2g0301911 33.514 370 187 15 140 489 30 360 1.29e-36 142
Msa1316670 MtrunA17_Chr3g0105461 32.326 331 155 7 52 367 69 345 2.27e-36 140
Msa1316670 MtrunA17_Chr2g0301921 37.273 220 118 6 528 742 1 205 4.11e-33 127
Msa1316670 MtrunA17_Chr3g0103071 37.165 261 145 8 258 501 1 259 1.68e-32 127
Msa1316670 MtrunA17_Chr4g0071191 37.500 208 112 5 467 670 57 250 9.48e-32 124
Msa1316670 MtrunA17_Chr5g0436021 40.000 175 83 4 165 335 30 186 2.81e-30 118
Msa1316670 MtrunA17_Chr3g0142981 37.989 179 68 3 169 344 32 170 2.69e-26 107
Msa1316670 MtrunA17_Chr8g0376851 34.320 169 104 4 578 742 6 171 3.57e-22 94.4
Msa1316670 MtrunA17_Chr3g0103081 38.255 149 83 5 596 742 1 142 8.42e-22 92.4
Msa1316670 MtrunA17_Chr5g0436031 34.706 170 103 4 576 742 16 180 1.49e-21 94.0
Msa1316670 MtrunA17_Chr2g0301021 28.169 355 140 15 3 351 32 277 2.82e-20 93.6
Msa1316670 MtrunA17_Chr3g0143231 47.778 90 45 2 470 559 2 89 9.41e-17 75.9
Msa1316670 MtrunA17_Chr5g0398341 47.826 92 46 1 528 619 1 90 1.05e-16 76.3
Msa1316670 MtrunA17_Chr3g0143221 32.759 174 88 6 578 743 11 163 2.28e-16 77.4
Msa1316670 MtrunA17_Chr3g0142971 50.000 86 41 2 470 555 2 85 9.75e-15 70.1
Msa1316670 MtrunA17_Chr3g0143021 36.735 98 62 0 52 149 7 104 1.75e-14 70.1
Msa1316670 MtrunA17_Chr3g0142961 35.385 130 72 4 579 700 12 137 2.11e-14 70.9
Msa1316670 MtrunA17_Chr5g0439281 32.000 125 76 3 52 167 73 197 1.89e-13 69.7
Msa1316670 MtrunA17_Chr3g0077671 46.667 75 34 3 519 590 237 308 4.77e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316670 AT5G67090.1 45.479 741 337 21 8 731 25 715 0.0 584
Msa1316670 AT5G67360.1 41.029 758 391 19 8 743 32 755 2.13e-176 524
Msa1316670 AT2G05920.1 40.026 757 405 15 8 747 30 754 6.60e-175 520
Msa1316670 AT4G34980.1 40.693 779 384 24 2 743 22 759 1.60e-172 514
Msa1316670 AT5G51750.1 38.532 763 426 17 4 743 33 775 1.25e-167 502
Msa1316670 AT3G14240.1 40.417 767 402 19 8 743 28 770 1.02e-165 497
Msa1316670 AT1G04110.1 38.622 769 418 19 6 743 26 771 5.06e-165 495
Msa1316670 AT3G14067.1 37.877 763 422 19 6 742 31 767 8.64e-162 487
Msa1316670 AT1G01900.1 39.918 734 402 17 30 743 58 772 2.41e-151 460
Msa1316670 AT2G04160.1 39.197 722 382 19 52 742 75 770 3.15e-145 444
Msa1316670 AT1G20160.2 38.102 727 386 22 52 744 28 724 1.20e-136 421
Msa1316670 AT5G59810.1 39.076 714 388 17 52 742 85 774 4.23e-136 421
Msa1316670 AT1G20160.1 38.102 727 386 22 52 744 67 763 7.85e-136 420
Msa1316670 AT4G00230.1 36.695 714 393 15 51 745 73 746 4.83e-132 409
Msa1316670 AT5G59190.1 38.842 708 363 19 52 741 32 687 4.16e-131 405
Msa1316670 AT5G03620.1 37.775 728 373 18 53 742 73 758 5.94e-130 404
Msa1316670 AT5G45650.2 35.990 803 419 27 2 743 21 789 1.33e-128 401
Msa1316670 AT5G45650.1 35.990 803 419 27 2 743 21 789 1.33e-128 401
Msa1316670 AT4G10550.4 37.879 726 389 20 52 744 16 712 3.73e-128 398
Msa1316670 AT4G10550.2 37.879 726 389 20 52 744 16 712 3.73e-128 398
Msa1316670 AT4G10550.3 37.879 726 389 20 52 744 88 784 1.04e-127 399
Msa1316670 AT4G10550.1 37.879 726 389 20 52 744 72 768 1.16e-127 399
Msa1316670 AT1G32960.1 37.500 728 390 20 52 744 70 767 3.78e-127 397
Msa1316670 AT4G10540.1 36.986 730 395 20 50 744 66 765 5.09e-125 392
Msa1316670 AT5G11940.1 35.865 711 413 16 49 744 72 754 1.73e-124 390
Msa1316670 AT4G26330.2 37.171 721 403 19 52 742 21 721 6.31e-124 387
Msa1316670 AT5G58840.1 37.252 706 363 18 51 744 71 708 2.64e-123 385
Msa1316670 AT5G59090.2 37.099 717 365 22 51 742 68 723 2.80e-123 386
Msa1316670 AT5G59090.1 37.151 716 371 22 51 742 68 728 6.06e-123 385
Msa1316670 AT5G59100.1 36.643 715 383 18 51 742 70 737 6.84e-123 385
Msa1316670 AT3G46850.1 35.411 754 415 22 8 742 34 734 3.20e-121 380
Msa1316670 AT3G46840.1 35.686 765 415 26 3 746 30 738 3.68e-121 380
Msa1316670 AT5G59090.3 37.151 716 369 23 51 742 68 726 1.02e-120 379
Msa1316670 AT4G26330.1 36.463 735 403 20 52 742 21 735 4.38e-120 378
Msa1316670 AT4G10510.2 35.497 724 408 19 52 744 1 696 2.02e-119 375
Msa1316670 AT4G10510.4 35.497 724 408 19 52 744 16 711 2.49e-119 375
Msa1316670 AT4G10510.1 35.497 724 408 19 52 744 60 755 5.29e-119 375
Msa1316670 AT4G10510.3 35.635 724 407 19 52 744 72 767 7.33e-119 375
Msa1316670 AT1G66210.1 35.615 716 407 18 52 749 78 757 1.39e-118 374
Msa1316670 AT4G21630.1 36.453 716 395 20 52 744 77 755 1.60e-118 374
Msa1316670 AT5G59130.3 35.319 722 382 16 51 748 32 692 2.05e-118 372
Msa1316670 AT5G58830.1 37.553 703 362 22 51 742 69 705 2.32e-118 372
Msa1316670 AT5G59120.1 36.150 722 380 20 51 747 67 732 2.49e-118 373
Msa1316670 AT5G59130.4 35.319 722 382 16 51 748 71 731 9.06e-118 372
Msa1316670 AT1G32940.4 36.915 726 397 20 52 744 16 713 4.39e-117 369
Msa1316670 AT1G32940.2 36.915 726 397 20 52 744 16 713 4.39e-117 369
Msa1316670 AT1G32940.1 36.915 726 397 20 52 744 67 764 1.38e-116 370
Msa1316670 AT5G59130.2 34.637 716 385 13 51 748 71 721 1.52e-116 368
Msa1316670 AT1G66220.1 33.803 710 415 15 52 744 75 746 1.17e-115 367
Msa1316670 AT5G59130.1 35.180 722 379 17 51 748 71 727 9.79e-115 363
Msa1316670 AT5G58820.1 37.429 700 370 21 51 744 65 702 2.67e-114 362
Msa1316670 AT4G10520.1 35.245 715 406 17 52 744 67 746 3.43e-114 363
Msa1316670 AT4G21650.1 36.161 719 398 19 52 744 79 762 7.78e-114 362
Msa1316670 AT4G21326.1 35.143 700 417 13 52 742 16 687 3.00e-113 358
Msa1316670 AT4G21640.1 35.344 713 379 16 52 744 79 729 3.69e-113 359
Msa1316670 AT1G20150.1 34.217 792 428 23 5 748 30 776 1.18e-111 357
Msa1316670 AT1G32950.2 36.864 727 395 21 52 744 16 712 2.99e-111 354
Msa1316670 AT1G32950.1 36.864 727 395 21 52 744 67 763 1.46e-110 353
Msa1316670 AT4G15040.2 34.734 714 386 17 52 744 33 687 1.81e-110 351
Msa1316670 AT4G15040.1 34.734 714 386 17 52 744 33 687 1.81e-110 351
Msa1316670 AT4G10530.1 34.129 712 409 17 52 744 67 737 1.14e-107 345
Msa1316670 AT4G21323.1 35.605 719 404 20 48 744 114 795 1.17e-106 344
Msa1316670 AT5G45640.1 34.631 745 396 25 60 743 38 752 7.01e-101 328
Msa1316670 AT5G03620.2 39.513 534 269 12 53 561 73 577 4.81e-97 312
Msa1316670 AT1G32970.1 38.765 583 298 19 191 744 172 724 4.14e-95 311
Msa1316670 AT4G00230.2 37.218 532 293 10 42 559 64 568 5.73e-95 307
Msa1316670 AT2G39850.1 31.903 746 408 26 52 742 65 765 9.39e-94 309
Msa1316670 AT5G58840.3 38.596 513 259 11 51 559 71 531 9.23e-93 300
Msa1316670 AT2G19170.1 31.184 760 424 24 49 741 82 809 1.19e-91 305
Msa1316670 AT2G19170.2 31.184 760 424 24 49 741 82 809 1.19e-91 305
Msa1316670 AT4G30020.3 31.388 771 409 27 49 741 82 810 1.38e-89 299
Msa1316670 AT4G30020.1 31.388 771 409 27 49 741 82 810 1.38e-89 299
Msa1316670 AT4G30020.4 31.388 771 409 27 49 741 82 810 1.38e-89 299
Msa1316670 AT4G30020.2 31.388 771 409 27 49 741 82 810 1.38e-89 299
Msa1316670 AT1G32940.3 37.477 555 296 16 52 575 67 601 3.64e-84 279
Msa1316670 AT4G20430.3 30.515 757 434 20 53 743 119 849 2.85e-82 280
Msa1316670 AT4G20430.1 30.515 757 434 20 53 743 119 849 2.85e-82 280
Msa1316670 AT4G20430.2 31.714 741 422 23 53 743 119 825 6.99e-81 276
Msa1316670 AT5G44530.1 30.423 756 432 19 53 742 106 833 4.58e-80 274
Msa1316670 AT5G44530.2 29.706 781 430 20 53 742 106 858 3.66e-76 263
Msa1316670 AT1G30600.1 30.688 756 431 26 53 742 98 826 8.86e-75 259
Msa1316670 AT1G20160.3 36.853 464 243 14 52 487 67 508 2.41e-72 246
Msa1316670 AT1G62340.1 29.281 765 437 26 53 744 98 831 6.80e-71 248
Msa1316670 AT5G58840.2 35.909 440 229 9 51 487 71 460 1.55e-65 225
Msa1316670 AT5G44530.3 30.556 504 283 10 53 501 106 597 7.22e-51 188
Msa1316670 AT1G32980.1 45.026 191 95 4 524 711 3 186 1.55e-39 144
Msa1316670 AT5G59110.1 35.928 167 89 7 586 742 8 166 2.84e-20 89.4

Find 158 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTAAAACTCTCACTTTC+TGG 0.123218 8_4:+17569655 None:intergenic
CTTATTGAATACCAACTTAT+TGG 0.163433 8_4:+17567965 None:intergenic
CTGTGCAACAACAAACTTAT+TGG 0.184359 8_4:-17569559 Msa1316670:CDS
AGTGATCTACAAATTGAAAT+TGG 0.200554 8_4:+17567809 None:intergenic
ATCTTTATTAGTTCAATAAA+TGG 0.226741 8_4:-17568758 Msa1316670:CDS
GCGATTGGATCTTCATAAAA+AGG 0.229777 8_4:+17569199 None:intergenic
TGGATTCATACCAAGCATTT+TGG 0.242139 8_4:+17569974 None:intergenic
CAAAATAATGAAGTAGCTTT+TGG 0.261973 8_4:-17567891 Msa1316670:CDS
GAAGAGGTAGGGTTAGGGTT+AGG 0.262487 8_4:+17569916 None:intergenic
AAGAGGTAGGGTTAGGGTTA+GGG 0.278698 8_4:+17569917 None:intergenic
GGTACTTTGGACCGTGAATT+TGG 0.282385 8_4:-17569058 Msa1316670:CDS
TTATTGAATACCAACTTATT+GGG 0.287600 8_4:+17567966 None:intergenic
TGACTCAAATTCCTTCAAAA+TGG 0.291912 8_4:-17569624 Msa1316670:CDS
GTTACTCTTGATGTATGATT+TGG 0.297234 8_4:+17568727 None:intergenic
GCATGGCCAGCTTCTGATTA+TGG 0.306396 8_4:-17569718 Msa1316670:CDS
AACTGTTGCTGCTGGTACTT+TGG 0.311678 8_4:-17569071 Msa1316670:CDS
ATGCCCCTTTGTAGGGATTA+AGG 0.325780 8_4:+17569737 None:intergenic
AGGGTTAGGGTTATTGTTGT+TGG 0.344346 8_4:+17569930 None:intergenic
ACCGGTTTGTCTTCCTATAT+AGG 0.347316 8_4:-17569001 Msa1316670:CDS
GTTGACGGTGCGTCATTCTT+TGG 0.353936 8_4:-17569412 Msa1316670:CDS
GTGATCTACAAATTGAAATT+GGG 0.357841 8_4:+17567810 None:intergenic
GATGTACTTTCAATATCAAT+AGG 0.359844 8_4:-17569235 Msa1316670:CDS
TAACTGTTCTATGAAATTCT+TGG 0.361156 8_4:+17568063 None:intergenic
ATGGCATGCCCTCATGTTGC+TGG 0.376373 8_4:-17568461 Msa1316670:CDS
CCAGGGTCAATTGCTCTGTT+GGG 0.380293 8_4:+17568269 None:intergenic
ATTGGAGCCCTGCAGCTATT+AGG 0.385368 8_4:-17568406 Msa1316670:CDS
ATCTTAGAAGAGGTAGGGTT+AGG 0.391665 8_4:+17569910 None:intergenic
TCTACTGGAGCAGGTAATAA+TGG 0.391913 8_4:-17569136 Msa1316670:CDS
CCTGGTCTTGTTTATGATGT+TGG 0.393335 8_4:-17568251 Msa1316670:CDS
TGATTGTTCTAAACCTTCCT+TGG 0.393711 8_4:-17568147 Msa1316670:CDS
GGAAGGTTTAGAACAATCAT+TGG 0.393756 8_4:+17568151 None:intergenic
TGAAGAAATATAACCATGTA+AGG 0.396019 8_4:+17569813 None:intergenic
CTTTCAATATCAATAGGCTT+TGG 0.398890 8_4:-17569229 Msa1316670:CDS
TGAAAGGAGCACATGCTGAT+TGG 0.414531 8_4:-17568424 Msa1316670:CDS
AGCAGAGAAATTTCCTATAT+AGG 0.414918 8_4:+17568988 None:intergenic
GTGTCATTGACACTGGTGTT+TGG 0.416087 8_4:-17569678 Msa1316670:CDS
TCATTCTTTGGTTATGCAAA+TGG 0.417117 8_4:-17569400 Msa1316670:CDS
ATTTATTGAACTAATAAAGA+TGG 0.421663 8_4:+17568760 None:intergenic
ATCGACCCTAGGTGCTGGTT+TGG 0.423688 8_4:+17568652 None:intergenic
ACACACTCACCACAATTCAT+AGG 0.431468 8_4:-17569760 Msa1316670:CDS
ACATATGGACAACTATTTGA+TGG 0.433415 8_4:+17568611 None:intergenic
ACATACACCAATGTTATGAA+TGG 0.439500 8_4:-17569880 Msa1316670:CDS
ATATCAGGTTTCAACACATA+TGG 0.439686 8_4:+17568596 None:intergenic
AAGGGTGTGTTTGTGTCTAC+TGG 0.440723 8_4:-17569151 Msa1316670:CDS
AGCTACAAGTTGAGGATTGA+AGG 0.441780 8_4:-17567927 Msa1316670:CDS
GCTAGCATTACGCCTGTTGA+AGG 0.442795 8_4:-17568008 Msa1316670:CDS
GTACCAGGAGCTGTAATATC+AGG 0.442984 8_4:+17568581 None:intergenic
TGACCAGCTCCTTGTGCAAA+AGG 0.444735 8_4:+17568299 None:intergenic
ATGTTGGAAATGCTTCTTCA+AGG 0.448290 8_4:-17568091 Msa1316670:CDS
AGAAGTTTCAAGTGTGTGTC+AGG 0.450697 8_4:+17569787 None:intergenic
GGAGATGAAACTACATCTGC+AGG 0.454724 8_4:+17569316 None:intergenic
GACAATTGTTGAACTAATGT+TGG 0.458686 8_4:+17569498 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 8_4:-17568053 Msa1316670:CDS
AGCTGGCCATGCCCCTTTGT+AGG 0.459878 8_4:+17569729 None:intergenic
CACACTTCAACAACAGCAGC+TGG 0.460137 8_4:-17569442 Msa1316670:CDS
TTGAGGGCTTCATGCTCTTG+AGG 0.461264 8_4:+17569838 None:intergenic
CCTGTGTTAATTCTTGAGTC+TGG 0.461981 8_4:-17568527 Msa1316670:CDS
ACCAGGGTCAATTGCTCTGT+TGG 0.462089 8_4:+17568268 None:intergenic
ATGTTTCAAGCAAATGTTGT+TGG 0.470137 8_4:-17568845 Msa1316670:CDS
AGTAATTACTTGATAAAGAG+TGG 0.472344 8_4:+17569954 None:intergenic
TCTTAGAAGAGGTAGGGTTA+GGG 0.473883 8_4:+17569911 None:intergenic
AAATCAGATGAAACTACATC+TGG 0.477776 8_4:+17569295 None:intergenic
CTCATAAAAGACATTGGAAA+AGG 0.484935 8_4:-17568338 Msa1316670:CDS
ATATTAGAAACTTGATCAGT+TGG 0.485721 8_4:+17568866 None:intergenic
ATTAACACAGGTACATTTGT+GGG 0.487421 8_4:+17568539 None:intergenic
GCTGGCCATGCCCCTTTGTA+GGG 0.488822 8_4:+17569730 None:intergenic
CTAACACGGTATCCTTCAAC+AGG 0.489929 8_4:+17567996 None:intergenic
ATTGCTGACCTAATAGCTGC+AGG 0.490658 8_4:+17568398 None:intergenic
TGCAATTGATGCCGCAGTAT+CGG 0.500686 8_4:-17569266 Msa1316670:CDS
TCCTATATAGGAAGACAAAC+CGG 0.500889 8_4:+17569000 None:intergenic
TATGGCAAAGATGTTATTGT+TGG 0.500947 8_4:-17569700 Msa1316670:CDS
ACAATTGTTGAACTAATGTT+GGG 0.502752 8_4:+17569499 None:intergenic
AAAGTAGCTATGTACAAGGT+TGG 0.502850 8_4:-17569349 Msa1316670:CDS
TAGGCCTTAATCCCTACAAA+GGG 0.506334 8_4:-17569741 Msa1316670:CDS
GTTACATCACATGGCAGGAT+GGG 0.515946 8_4:-17567869 Msa1316670:CDS
CAGGGTCAATTGCTCTGTTG+GGG 0.518214 8_4:+17568270 None:intergenic
GCAAAAGTGGCTATTGCGAT+TGG 0.518321 8_4:+17569184 None:intergenic
TAAGTATCCCACCAAATTCA+CGG 0.520946 8_4:+17569047 None:intergenic
CTTACTCAAACCAAAATGCT+TGG 0.531114 8_4:-17569984 Msa1316670:CDS
AGAAGCTAAGCTACAAGTTG+AGG 0.531800 8_4:-17567935 Msa1316670:CDS
GGGATACTTACACTTGGTAA+TGG 0.534998 8_4:-17569034 Msa1316670:CDS
TGCCCTCATGTTGCTGGTGT+AGG 0.535967 8_4:-17568455 Msa1316670:CDS
AAACCTGATATTACAGCTCC+TGG 0.538191 8_4:-17568584 Msa1316670:CDS
AGACATATTTGATAATACTA+AGG 0.538939 8_4:-17568363 Msa1316670:CDS
TGGTACCAAACCAGCACCTA+GGG 0.541303 8_4:-17568657 Msa1316670:CDS
ACAACAAACTTATTGGAGCT+AGG 0.544940 8_4:-17569552 Msa1316670:CDS
GTCGATTATTATAGTTCAAG+AGG 0.545788 8_4:-17568635 Msa1316670:CDS
CAAAGTGAAGAGCAAGATTG+TGG 0.546284 8_4:-17568912 Msa1316670:CDS
ATTGAACTAATAAAGATGGA+TGG 0.548190 8_4:+17568764 None:intergenic
GTGTTTGTGTCTACTGGAGC+AGG 0.550762 8_4:-17569145 Msa1316670:CDS
ATTGTTGGTGTCATTGACAC+TGG 0.551582 8_4:-17569685 Msa1316670:CDS
TATTGAATACCAACTTATTG+GGG 0.551614 8_4:+17567967 None:intergenic
TGATCTACAAATTGAAATTG+GGG 0.552684 8_4:+17567811 None:intergenic
AATTAACACAGGTACATTTG+TGG 0.554055 8_4:+17568538 None:intergenic
TAGTGTTATCCCCAATAAGT+TGG 0.554558 8_4:-17567976 Msa1316670:CDS
CTTTGGACCGTGAATTTGGT+GGG 0.554951 8_4:-17569054 Msa1316670:CDS
AGCTTGTCCCTCACCAACAT+TGG 0.555610 8_4:+17568040 None:intergenic
TCAACGGCAAACATGTCTCT+CGG 0.555649 8_4:-17568692 Msa1316670:CDS
ATCAACTCCGTCCGATACTG+CGG 0.556171 8_4:+17569255 None:intergenic
AAGGAACTCATAAAAGACAT+TGG 0.557100 8_4:-17568344 Msa1316670:CDS
CCAACATCATAAACAAGACC+AGG 0.558341 8_4:+17568251 None:intergenic
TGTTGTTGCACAGAGATGAA+TGG 0.560568 8_4:+17569569 None:intergenic
TGTTCTATGAAATTCTTGGA+TGG 0.563635 8_4:+17568067 None:intergenic
TAATAATCGACCCTAGGTGC+TGG 0.563768 8_4:+17568647 None:intergenic
TGTATAAATGATCTTAGAAG+AGG 0.565477 8_4:+17569900 None:intergenic
GGTTACATCACATGGCAGGA+TGG 0.566321 8_4:-17567870 Msa1316670:CDS
TATGCAAATGGAAGCGCAAG+AGG 0.566938 8_4:-17569388 Msa1316670:CDS
GAACTATAATAATCGACCCT+AGG 0.567994 8_4:+17568641 None:intergenic
TAGCTATGTACAAGGTTGGA+TGG 0.570141 8_4:-17569345 Msa1316670:CDS
ATTGGAAGAAGATCTTGTAA+TGG 0.574725 8_4:+17568169 None:intergenic
ATAGGCCTTAATCCCTACAA+AGG 0.575179 8_4:-17569742 Msa1316670:CDS
ACTAAAACCATTCATAACAT+TGG 0.575372 8_4:+17569873 None:intergenic
TAACTCTAACTCGGTTTCAA+CGG 0.576691 8_4:-17568708 Msa1316670:CDS
GCAGCTGGGAATCAAGTTGA+CGG 0.577538 8_4:-17569427 Msa1316670:CDS
CAAATTCCTTCAAAATGGAA+AGG 0.578000 8_4:-17569619 Msa1316670:CDS
GCTTAGCAATGTAGCACCAT+GGG 0.579967 8_4:-17569098 Msa1316670:CDS
TTTCAAGCAAATGTTGTTGG+AGG 0.580213 8_4:-17568842 Msa1316670:CDS
TTTCAACAAAGGATTCTTGG+CGG 0.582198 8_4:-17569527 Msa1316670:CDS
GAAGCCCTCAAAACCTTACA+TGG 0.582672 8_4:-17569826 Msa1316670:CDS
AACAGTTACCAATGTTGGTG+AGG 0.584570 8_4:-17568048 Msa1316670:CDS
TGGGTGACAACTGTTGCTGC+TGG 0.585861 8_4:-17569079 Msa1316670:CDS
TCTTTGCCATAATCAGAAGC+TGG 0.589411 8_4:+17569712 None:intergenic
ACACGTGACACAGATGGTCA+TGG 0.589620 8_4:-17569469 Msa1316670:CDS
AAATGATCTTAGAAGAGGTA+GGG 0.589932 8_4:+17569905 None:intergenic
CATCAAGAGTAACTCTAACT+CGG 0.590851 8_4:-17568717 Msa1316670:CDS
GGTAATGGAGTCTCACTCAC+CGG 0.593516 8_4:-17569019 Msa1316670:CDS
TAAATGATCTTAGAAGAGGT+AGG 0.594636 8_4:+17569904 None:intergenic
TTGGTACCAAACCAGCACCT+AGG 0.594772 8_4:-17568658 Msa1316670:CDS
TTTGGTGGGATACTTACACT+TGG 0.597224 8_4:-17569040 Msa1316670:CDS
AGAAGGGTAATTAAGATCCA+AGG 0.600433 8_4:+17568130 None:intergenic
CACGTGACACAGATGGTCAT+GGG 0.602226 8_4:-17569468 Msa1316670:CDS
ACTTTGGACCGTGAATTTGG+TGG 0.602825 8_4:-17569055 Msa1316670:CDS
GGATTAAGGCCTATGAATTG+TGG 0.606055 8_4:+17569751 None:intergenic
TTAATCCCTACAAAGGGGCA+TGG 0.609945 8_4:-17569735 Msa1316670:CDS
GTCTAAAGTAGCTATGTACA+AGG 0.613437 8_4:-17569353 Msa1316670:CDS
TTGCTGACCTAATAGCTGCA+GGG 0.614320 8_4:+17568399 None:intergenic
AGCTTAGCAATGTAGCACCA+TGG 0.619584 8_4:-17569099 Msa1316670:CDS
ACAGTTACCAATGTTGGTGA+GGG 0.621956 8_4:-17568047 Msa1316670:CDS
ATTGATGCCGCAGTATCGGA+CGG 0.624647 8_4:-17569262 Msa1316670:CDS
GCAGCAACAGTTGTCACCCA+TGG 0.625596 8_4:+17569082 None:intergenic
GCTCCTACACCAGCAACATG+AGG 0.628455 8_4:+17568452 None:intergenic
TCGATTATTATAGTTCAAGA+GGG 0.630306 8_4:-17568634 Msa1316670:CDS
ACACTTCAACAACAGCAGCT+GGG 0.634517 8_4:-17569441 Msa1316670:CDS
GGGTAATTAAGATCCAAGGA+AGG 0.636054 8_4:+17568134 None:intergenic
GAGCAAGATTGTGGTTTGTG+AGG 0.641293 8_4:-17568903 Msa1316670:CDS
CTCCTACACCAGCAACATGA+GGG 0.641334 8_4:+17568453 None:intergenic
AATAGCACACGTGACACAGA+TGG 0.645445 8_4:-17569475 Msa1316670:CDS
GAGATGAAACTACATCTGCA+GGG 0.655605 8_4:+17569317 None:intergenic
CCCAACAGAGCAATTGACCC+TGG 0.657581 8_4:-17568269 Msa1316670:CDS
GTTGCACAGAGATGAATGGT+TGG 0.665235 8_4:+17569573 None:intergenic
GAAGCTAAGATTGATGTACC+AGG 0.668272 8_4:+17568566 None:intergenic
TGTGGTGAGAAGCCCTATTG+TGG 0.672366 8_4:-17567841 Msa1316670:CDS
TATTGGGGATAACACTAACA+CGG 0.699300 8_4:+17567982 None:intergenic
GATCTACAAATTGAAATTGG+GGG 0.717780 8_4:+17567812 None:intergenic
CCAGACTCAAGAATTAACAC+AGG 0.725464 8_4:+17568527 None:intergenic
CAACATCATAAACAAGACCA+GGG 0.726316 8_4:+17568252 None:intergenic
AGGCCTTAATCCCTACAAAG+GGG 0.732545 8_4:-17569740 Msa1316670:CDS
ATGGCAGGATGGGAAGCATG+TGG 0.747934 8_4:-17567859 Msa1316670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTCAAATTGTTTTCA+TGG - chr8_4:17568894-17568913 Msa1316670:CDS 15.0%
!! ATTTATTGAACTAATAAAGA+TGG + chr8_4:17569100-17569119 None:intergenic 15.0%
!! ATCTTTATTAGTTCAATAAA+TGG - chr8_4:17569099-17569118 Msa1316670:CDS 15.0%
!!! TAATTTTCAAATTGTTTTCA+TGG - chr8_4:17568894-17568913 Msa1316670:CDS 15.0%
!! ATTTATTGAACTAATAAAGA+TGG + chr8_4:17569100-17569119 None:intergenic 15.0%
!! ATCTTTATTAGTTCAATAAA+TGG - chr8_4:17569099-17569118 Msa1316670:CDS 15.0%
!!! AACAAGTTTAATGTTTTAAG+TGG - chr8_4:17569366-17569385 Msa1316670:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG - chr8_4:17569494-17569513 Msa1316670:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG + chr8_4:17569746-17569765 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG + chr8_4:17569747-17569766 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG - chr8_4:17569750-17569769 Msa1316670:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG + chr8_4:17569894-17569913 None:intergenic 20.0%
!!! AACAAGTTTAATGTTTTAAG+TGG - chr8_4:17569366-17569385 Msa1316670:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG - chr8_4:17569494-17569513 Msa1316670:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG + chr8_4:17569746-17569765 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG + chr8_4:17569747-17569766 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG - chr8_4:17569750-17569769 Msa1316670:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG + chr8_4:17569894-17569913 None:intergenic 20.0%
! AGTAATTACTTGATAAAGAG+TGG + chr8_4:17567906-17567925 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG + chr8_4:17567960-17567979 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG + chr8_4:17567987-17568006 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG + chr8_4:17568047-17568066 None:intergenic 25.0%
!!! AGTGAGAGTTTTAATGATAA+TGG - chr8_4:17568208-17568227 Msa1316670:CDS 25.0%
! ACAATTGTTGAACTAATGTT+GGG + chr8_4:17568361-17568380 None:intergenic 25.0%
! GATGTACTTTCAATATCAAT+AGG - chr8_4:17568622-17568641 Msa1316670:CDS 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG + chr8_4:17568748-17568767 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG + chr8_4:17568749-17568768 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG + chr8_4:17568994-17569013 None:intergenic 25.0%
! ATTGAACTAATAAAGATGGA+TGG + chr8_4:17569096-17569115 None:intergenic 25.0%
! TCGATTATTATAGTTCAAGA+GGG - chr8_4:17569223-17569242 Msa1316670:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_4:17569797-17569816 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG + chr8_4:17569893-17569912 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG + chr8_4:17569895-17569914 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG + chr8_4:17569956-17569975 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG + chr8_4:17569957-17569976 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG - chr8_4:17569966-17569985 Msa1316670:CDS 25.0%
! AGTAATTACTTGATAAAGAG+TGG + chr8_4:17567906-17567925 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG + chr8_4:17567960-17567979 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG + chr8_4:17567987-17568006 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG + chr8_4:17568047-17568066 None:intergenic 25.0%
!!! AGTGAGAGTTTTAATGATAA+TGG - chr8_4:17568208-17568227 Msa1316670:CDS 25.0%
! ACAATTGTTGAACTAATGTT+GGG + chr8_4:17568361-17568380 None:intergenic 25.0%
! GATGTACTTTCAATATCAAT+AGG - chr8_4:17568622-17568641 Msa1316670:CDS 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG + chr8_4:17568748-17568767 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG + chr8_4:17568749-17568768 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG + chr8_4:17568994-17569013 None:intergenic 25.0%
! ATTGAACTAATAAAGATGGA+TGG + chr8_4:17569096-17569115 None:intergenic 25.0%
! TCGATTATTATAGTTCAAGA+GGG - chr8_4:17569223-17569242 Msa1316670:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_4:17569797-17569816 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG + chr8_4:17569893-17569912 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG + chr8_4:17569895-17569914 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG + chr8_4:17569956-17569975 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG + chr8_4:17569957-17569976 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG - chr8_4:17569966-17569985 Msa1316670:CDS 25.0%
!!! TTTTGGTTTGAGTAAGGTTT+TGG + chr8_4:17567869-17567888 None:intergenic 30.0%
AAATGATCTTAGAAGAGGTA+GGG + chr8_4:17567955-17567974 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG + chr8_4:17567956-17567975 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG - chr8_4:17567977-17567996 Msa1316670:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG + chr8_4:17568038-17568057 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG + chr8_4:17568039-17568058 None:intergenic 30.0%
TATGGCAAAGATGTTATTGT+TGG - chr8_4:17568157-17568176 Msa1316670:CDS 30.0%
TCATTAAAACTCTCACTTTC+TGG + chr8_4:17568205-17568224 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG - chr8_4:17568233-17568252 Msa1316670:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG - chr8_4:17568238-17568257 Msa1316670:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG - chr8_4:17568327-17568346 Msa1316670:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG + chr8_4:17568362-17568381 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG - chr8_4:17568457-17568476 Msa1316670:CDS 30.0%
AAATCAGATGAAACTACATC+TGG + chr8_4:17568565-17568584 None:intergenic 30.0%
CTTTCAATATCAATAGGCTT+TGG - chr8_4:17568628-17568647 Msa1316670:CDS 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG + chr8_4:17568747-17568766 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG + chr8_4:17568872-17568891 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG - chr8_4:17569012-17569031 Msa1316670:CDS 30.0%
GTTACTCTTGATGTATGATT+TGG + chr8_4:17569133-17569152 None:intergenic 30.0%
!!! TCTCTCGGATTAACATTTTT+TGG - chr8_4:17569180-17569199 Msa1316670:CDS 30.0%
GTCGATTATTATAGTTCAAG+AGG - chr8_4:17569222-17569241 Msa1316670:CDS 30.0%
ACATATGGACAACTATTTGA+TGG + chr8_4:17569249-17569268 None:intergenic 30.0%
ATATCAGGTTTCAACACATA+TGG + chr8_4:17569264-17569283 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG + chr8_4:17569321-17569340 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG + chr8_4:17569322-17569341 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG - chr8_4:17569377-17569396 Msa1316670:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG - chr8_4:17569513-17569532 Msa1316670:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG - chr8_4:17569519-17569538 Msa1316670:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG + chr8_4:17569691-17569710 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG + chr8_4:17569793-17569812 None:intergenic 30.0%
!!! TTTTGGTTTGAGTAAGGTTT+TGG + chr8_4:17567869-17567888 None:intergenic 30.0%
AAATGATCTTAGAAGAGGTA+GGG + chr8_4:17567955-17567974 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG + chr8_4:17567956-17567975 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG - chr8_4:17567977-17567996 Msa1316670:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG + chr8_4:17568038-17568057 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG + chr8_4:17568039-17568058 None:intergenic 30.0%
TATGGCAAAGATGTTATTGT+TGG - chr8_4:17568157-17568176 Msa1316670:CDS 30.0%
TCATTAAAACTCTCACTTTC+TGG + chr8_4:17568205-17568224 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG - chr8_4:17568233-17568252 Msa1316670:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG - chr8_4:17568238-17568257 Msa1316670:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG - chr8_4:17568327-17568346 Msa1316670:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG + chr8_4:17568362-17568381 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG - chr8_4:17568457-17568476 Msa1316670:CDS 30.0%
AAATCAGATGAAACTACATC+TGG + chr8_4:17568565-17568584 None:intergenic 30.0%
CTTTCAATATCAATAGGCTT+TGG - chr8_4:17568628-17568647 Msa1316670:CDS 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG + chr8_4:17568747-17568766 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG + chr8_4:17568872-17568891 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG - chr8_4:17569012-17569031 Msa1316670:CDS 30.0%
GTTACTCTTGATGTATGATT+TGG + chr8_4:17569133-17569152 None:intergenic 30.0%
!!! TCTCTCGGATTAACATTTTT+TGG - chr8_4:17569180-17569199 Msa1316670:CDS 30.0%
GTCGATTATTATAGTTCAAG+AGG - chr8_4:17569222-17569241 Msa1316670:CDS 30.0%
ACATATGGACAACTATTTGA+TGG + chr8_4:17569249-17569268 None:intergenic 30.0%
ATATCAGGTTTCAACACATA+TGG + chr8_4:17569264-17569283 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG + chr8_4:17569321-17569340 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG + chr8_4:17569322-17569341 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG - chr8_4:17569377-17569396 Msa1316670:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG - chr8_4:17569513-17569532 Msa1316670:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG - chr8_4:17569519-17569538 Msa1316670:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG + chr8_4:17569691-17569710 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG + chr8_4:17569793-17569812 None:intergenic 30.0%
!!! CAAGCATTTTGGTTTGAGTA+AGG + chr8_4:17567875-17567894 None:intergenic 35.0%
CTTACTCAAACCAAAATGCT+TGG - chr8_4:17567873-17567892 Msa1316670:CDS 35.0%
! TGGATTCATACCAAGCATTT+TGG + chr8_4:17567886-17567905 None:intergenic 35.0%
! AACTTGCCTTTCCATTTTGA+AGG + chr8_4:17568247-17568266 None:intergenic 35.0%
CTGTGCAACAACAAACTTAT+TGG - chr8_4:17568298-17568317 Msa1316670:CDS 35.0%
ACAACAAACTTATTGGAGCT+AGG - chr8_4:17568305-17568324 Msa1316670:CDS 35.0%
TTTCAACAAAGGATTCTTGG+CGG - chr8_4:17568330-17568349 Msa1316670:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG - chr8_4:17568504-17568523 Msa1316670:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG - chr8_4:17568508-17568527 Msa1316670:CDS 35.0%
GCGATTGGATCTTCATAAAA+AGG + chr8_4:17568661-17568680 None:intergenic 35.0%
! ACTTTTGCAGCTATGGAAAA+GGG - chr8_4:17568688-17568707 Msa1316670:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG + chr8_4:17568813-17568832 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG + chr8_4:17568860-17568879 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG - chr8_4:17568964-17568983 Msa1316670:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG - chr8_4:17569015-17569034 Msa1316670:CDS 35.0%
CATCAAGAGTAACTCTAACT+CGG - chr8_4:17569140-17569159 Msa1316670:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG - chr8_4:17569149-17569168 Msa1316670:CDS 35.0%
GAACTATAATAATCGACCCT+AGG + chr8_4:17569219-17569238 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG + chr8_4:17569608-17569627 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG + chr8_4:17569709-17569728 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG - chr8_4:17569710-17569729 Msa1316670:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG + chr8_4:17569730-17569749 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG - chr8_4:17569766-17569785 Msa1316670:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_4:17569804-17569823 Msa1316670:CDS 35.0%
TATTGGGGATAACACTAACA+CGG + chr8_4:17569878-17569897 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG - chr8_4:17569881-17569900 Msa1316670:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG - chr8_4:17569979-17569998 Msa1316670:CDS 35.0%
!!! CAAGCATTTTGGTTTGAGTA+AGG + chr8_4:17567875-17567894 None:intergenic 35.0%
CTTACTCAAACCAAAATGCT+TGG - chr8_4:17567873-17567892 Msa1316670:CDS 35.0%
! TGGATTCATACCAAGCATTT+TGG + chr8_4:17567886-17567905 None:intergenic 35.0%
! AACTTGCCTTTCCATTTTGA+AGG + chr8_4:17568247-17568266 None:intergenic 35.0%
CTGTGCAACAACAAACTTAT+TGG - chr8_4:17568298-17568317 Msa1316670:CDS 35.0%
ACAACAAACTTATTGGAGCT+AGG - chr8_4:17568305-17568324 Msa1316670:CDS 35.0%
TTTCAACAAAGGATTCTTGG+CGG - chr8_4:17568330-17568349 Msa1316670:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG - chr8_4:17568504-17568523 Msa1316670:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG - chr8_4:17568508-17568527 Msa1316670:CDS 35.0%
GCGATTGGATCTTCATAAAA+AGG + chr8_4:17568661-17568680 None:intergenic 35.0%
! ACTTTTGCAGCTATGGAAAA+GGG - chr8_4:17568688-17568707 Msa1316670:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG + chr8_4:17568813-17568832 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG + chr8_4:17568860-17568879 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG - chr8_4:17568964-17568983 Msa1316670:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG - chr8_4:17569015-17569034 Msa1316670:CDS 35.0%
CATCAAGAGTAACTCTAACT+CGG - chr8_4:17569140-17569159 Msa1316670:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG - chr8_4:17569149-17569168 Msa1316670:CDS 35.0%
GAACTATAATAATCGACCCT+AGG + chr8_4:17569219-17569238 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG + chr8_4:17569608-17569627 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG + chr8_4:17569709-17569728 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG - chr8_4:17569710-17569729 Msa1316670:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG + chr8_4:17569730-17569749 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG - chr8_4:17569766-17569785 Msa1316670:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_4:17569804-17569823 Msa1316670:CDS 35.0%
TATTGGGGATAACACTAACA+CGG + chr8_4:17569878-17569897 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG - chr8_4:17569881-17569900 Msa1316670:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG - chr8_4:17569979-17569998 Msa1316670:CDS 35.0%
AGGGTTAGGGTTATTGTTGT+TGG + chr8_4:17567930-17567949 None:intergenic 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG + chr8_4:17567949-17567968 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG + chr8_4:17567950-17567969 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG + chr8_4:17568073-17568092 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG - chr8_4:17568097-17568116 Msa1316670:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG + chr8_4:17568109-17568128 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG - chr8_4:17568115-17568134 Msa1316670:CDS 40.0%
TAGGCCTTAATCCCTACAAA+GGG - chr8_4:17568116-17568135 Msa1316670:CDS 40.0%
TCTTTGCCATAATCAGAAGC+TGG + chr8_4:17568148-17568167 None:intergenic 40.0%
!! ATTGTTGGTGTCATTGACAC+TGG - chr8_4:17568172-17568191 Msa1316670:CDS 40.0%
TGTTGTTGCACAGAGATGAA+TGG + chr8_4:17568291-17568310 None:intergenic 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG - chr8_4:17568319-17568338 Msa1316670:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG - chr8_4:17568512-17568531 Msa1316670:CDS 40.0%
GAGATGAAACTACATCTGCA+GGG + chr8_4:17568543-17568562 None:intergenic 40.0%
!!! AATAGCCACTTTTGCAGCTA+TGG - chr8_4:17568681-17568700 Msa1316670:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+TGG + chr8_4:17568689-17568708 None:intergenic 40.0%
! CACTTTTGCAGCTATGGAAA+AGG - chr8_4:17568687-17568706 Msa1316670:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG - chr8_4:17568721-17568740 Msa1316670:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG - chr8_4:17568817-17568836 Msa1316670:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG - chr8_4:17568823-17568842 Msa1316670:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG - chr8_4:17568856-17568875 Msa1316670:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG - chr8_4:17568945-17568964 Msa1316670:CDS 40.0%
AAACCTGATATTACAGCTCC+TGG - chr8_4:17569273-17569292 Msa1316670:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG + chr8_4:17569294-17569313 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG + chr8_4:17569333-17569352 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG - chr8_4:17569330-17569349 Msa1316670:CDS 40.0%
CCAACATCATAAACAAGACC+AGG + chr8_4:17569609-17569628 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG - chr8_4:17569606-17569625 Msa1316670:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG + chr8_4:17569726-17569745 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_4:17569809-17569828 Msa1316670:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_4:17569810-17569829 Msa1316670:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG - chr8_4:17569922-17569941 Msa1316670:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG - chr8_4:17569930-17569949 Msa1316670:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG - chr8_4:17569983-17570002 Msa1316670:CDS 40.0%
AGGGTTAGGGTTATTGTTGT+TGG + chr8_4:17567930-17567949 None:intergenic 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG + chr8_4:17567949-17567968 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG + chr8_4:17567950-17567969 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG + chr8_4:17568073-17568092 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG - chr8_4:17568097-17568116 Msa1316670:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG + chr8_4:17568109-17568128 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG - chr8_4:17568115-17568134 Msa1316670:CDS 40.0%
TAGGCCTTAATCCCTACAAA+GGG - chr8_4:17568116-17568135 Msa1316670:CDS 40.0%
TCTTTGCCATAATCAGAAGC+TGG + chr8_4:17568148-17568167 None:intergenic 40.0%
!! ATTGTTGGTGTCATTGACAC+TGG - chr8_4:17568172-17568191 Msa1316670:CDS 40.0%
TGTTGTTGCACAGAGATGAA+TGG + chr8_4:17568291-17568310 None:intergenic 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG - chr8_4:17568319-17568338 Msa1316670:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG - chr8_4:17568512-17568531 Msa1316670:CDS 40.0%
GAGATGAAACTACATCTGCA+GGG + chr8_4:17568543-17568562 None:intergenic 40.0%
!!! AATAGCCACTTTTGCAGCTA+TGG - chr8_4:17568681-17568700 Msa1316670:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+TGG + chr8_4:17568689-17568708 None:intergenic 40.0%
! CACTTTTGCAGCTATGGAAA+AGG - chr8_4:17568687-17568706 Msa1316670:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG - chr8_4:17568721-17568740 Msa1316670:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG - chr8_4:17568817-17568836 Msa1316670:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG - chr8_4:17568823-17568842 Msa1316670:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG - chr8_4:17568856-17568875 Msa1316670:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG - chr8_4:17568945-17568964 Msa1316670:CDS 40.0%
AAACCTGATATTACAGCTCC+TGG - chr8_4:17569273-17569292 Msa1316670:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG + chr8_4:17569294-17569313 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG + chr8_4:17569333-17569352 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG - chr8_4:17569330-17569349 Msa1316670:CDS 40.0%
CCAACATCATAAACAAGACC+AGG + chr8_4:17569609-17569628 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG - chr8_4:17569606-17569625 Msa1316670:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG + chr8_4:17569726-17569745 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_4:17569809-17569828 Msa1316670:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_4:17569810-17569829 Msa1316670:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG - chr8_4:17569922-17569941 Msa1316670:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG - chr8_4:17569930-17569949 Msa1316670:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG - chr8_4:17569983-17570002 Msa1316670:CDS 40.0%
AAGAGGTAGGGTTAGGGTTA+GGG + chr8_4:17567943-17567962 None:intergenic 45.0%
GAAGCCCTCAAAACCTTACA+TGG - chr8_4:17568031-17568050 Msa1316670:CDS 45.0%
AGGCCTTAATCCCTACAAAG+GGG - chr8_4:17568117-17568136 Msa1316670:CDS 45.0%
ATGCCCCTTTGTAGGGATTA+AGG + chr8_4:17568123-17568142 None:intergenic 45.0%
TTAATCCCTACAAAGGGGCA+TGG - chr8_4:17568122-17568141 Msa1316670:CDS 45.0%
! GTGTCATTGACACTGGTGTT+TGG - chr8_4:17568179-17568198 Msa1316670:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG + chr8_4:17568287-17568306 None:intergenic 45.0%
AATAGCACACGTGACACAGA+TGG - chr8_4:17568382-17568401 Msa1316670:CDS 45.0%
ACACTTCAACAACAGCAGCT+GGG - chr8_4:17568416-17568435 Msa1316670:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG - chr8_4:17568469-17568488 Msa1316670:CDS 45.0%
GGAGATGAAACTACATCTGC+AGG + chr8_4:17568544-17568563 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG - chr8_4:17568591-17568610 Msa1316670:CDS 45.0%
GCAAAAGTGGCTATTGCGAT+TGG + chr8_4:17568676-17568695 None:intergenic 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG - chr8_4:17568706-17568725 Msa1316670:CDS 45.0%
AGCTTAGCAATGTAGCACCA+TGG - chr8_4:17568758-17568777 Msa1316670:CDS 45.0%
GCTTAGCAATGTAGCACCAT+GGG - chr8_4:17568759-17568778 Msa1316670:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG - chr8_4:17568786-17568805 Msa1316670:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG - chr8_4:17568799-17568818 Msa1316670:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG - chr8_4:17568802-17568821 Msa1316670:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG - chr8_4:17568803-17568822 Msa1316670:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG - chr8_4:17568954-17568973 Msa1316670:CDS 45.0%
TCAACGGCAAACATGTCTCT+CGG - chr8_4:17569165-17569184 Msa1316670:CDS 45.0%
TAATAATCGACCCTAGGTGC+TGG + chr8_4:17569213-17569232 None:intergenic 45.0%
GTACCAGGAGCTGTAATATC+AGG + chr8_4:17569279-17569298 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG - chr8_4:17569417-17569436 Msa1316670:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG - chr8_4:17569433-17569452 Msa1316670:CDS 45.0%
TTGCTGACCTAATAGCTGCA+GGG + chr8_4:17569461-17569480 None:intergenic 45.0%
ATTGCTGACCTAATAGCTGC+AGG + chr8_4:17569462-17569481 None:intergenic 45.0%
! GTAGCAACACCTTTTGCACA+AGG - chr8_4:17569549-17569568 Msa1316670:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG + chr8_4:17569864-17569883 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG - chr8_4:17569988-17570007 Msa1316670:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG + chr8_4:17570031-17570050 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG + chr8_4:17570032-17570051 None:intergenic 45.0%
AAGAGGTAGGGTTAGGGTTA+GGG + chr8_4:17567943-17567962 None:intergenic 45.0%
GAAGCCCTCAAAACCTTACA+TGG - chr8_4:17568031-17568050 Msa1316670:CDS 45.0%
AGGCCTTAATCCCTACAAAG+GGG - chr8_4:17568117-17568136 Msa1316670:CDS 45.0%
ATGCCCCTTTGTAGGGATTA+AGG + chr8_4:17568123-17568142 None:intergenic 45.0%
TTAATCCCTACAAAGGGGCA+TGG - chr8_4:17568122-17568141 Msa1316670:CDS 45.0%
! GTGTCATTGACACTGGTGTT+TGG - chr8_4:17568179-17568198 Msa1316670:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG + chr8_4:17568287-17568306 None:intergenic 45.0%
AATAGCACACGTGACACAGA+TGG - chr8_4:17568382-17568401 Msa1316670:CDS 45.0%
ACACTTCAACAACAGCAGCT+GGG - chr8_4:17568416-17568435 Msa1316670:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG - chr8_4:17568469-17568488 Msa1316670:CDS 45.0%
GGAGATGAAACTACATCTGC+AGG + chr8_4:17568544-17568563 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG - chr8_4:17568591-17568610 Msa1316670:CDS 45.0%
GCAAAAGTGGCTATTGCGAT+TGG + chr8_4:17568676-17568695 None:intergenic 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG - chr8_4:17568706-17568725 Msa1316670:CDS 45.0%
AGCTTAGCAATGTAGCACCA+TGG - chr8_4:17568758-17568777 Msa1316670:CDS 45.0%
GCTTAGCAATGTAGCACCAT+GGG - chr8_4:17568759-17568778 Msa1316670:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG - chr8_4:17568786-17568805 Msa1316670:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG - chr8_4:17568799-17568818 Msa1316670:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG - chr8_4:17568802-17568821 Msa1316670:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG - chr8_4:17568803-17568822 Msa1316670:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG - chr8_4:17568954-17568973 Msa1316670:CDS 45.0%
TCAACGGCAAACATGTCTCT+CGG - chr8_4:17569165-17569184 Msa1316670:CDS 45.0%
TAATAATCGACCCTAGGTGC+TGG + chr8_4:17569213-17569232 None:intergenic 45.0%
GTACCAGGAGCTGTAATATC+AGG + chr8_4:17569279-17569298 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG - chr8_4:17569417-17569436 Msa1316670:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG - chr8_4:17569433-17569452 Msa1316670:CDS 45.0%
TTGCTGACCTAATAGCTGCA+GGG + chr8_4:17569461-17569480 None:intergenic 45.0%
ATTGCTGACCTAATAGCTGC+AGG + chr8_4:17569462-17569481 None:intergenic 45.0%
! GTAGCAACACCTTTTGCACA+AGG - chr8_4:17569549-17569568 Msa1316670:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG + chr8_4:17569864-17569883 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG - chr8_4:17569988-17570007 Msa1316670:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG + chr8_4:17570031-17570050 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG + chr8_4:17570032-17570051 None:intergenic 45.0%
GAAGAGGTAGGGTTAGGGTT+AGG + chr8_4:17567944-17567963 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG + chr8_4:17568022-17568041 None:intergenic 50.0%
GCATGGCCAGCTTCTGATTA+TGG - chr8_4:17568139-17568158 Msa1316670:CDS 50.0%
ACACGTGACACAGATGGTCA+TGG - chr8_4:17568388-17568407 Msa1316670:CDS 50.0%
CACGTGACACAGATGGTCAT+GGG - chr8_4:17568389-17568408 Msa1316670:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG - chr8_4:17568415-17568434 Msa1316670:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG - chr8_4:17568430-17568449 Msa1316670:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG - chr8_4:17568445-17568464 Msa1316670:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG - chr8_4:17568595-17568614 Msa1316670:CDS 50.0%
ATCAACTCCGTCCGATACTG+CGG + chr8_4:17568605-17568624 None:intergenic 50.0%
GTGTTTGTGTCTACTGGAGC+AGG - chr8_4:17568712-17568731 Msa1316670:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG - chr8_4:17568838-17568857 Msa1316670:CDS 50.0%
TTGGTACCAAACCAGCACCT+AGG - chr8_4:17569199-17569218 Msa1316670:CDS 50.0%
TGGTACCAAACCAGCACCTA+GGG - chr8_4:17569200-17569219 Msa1316670:CDS 50.0%
CTCCTACACCAGCAACATGA+GGG + chr8_4:17569407-17569426 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG - chr8_4:17569451-17569470 Msa1316670:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG - chr8_4:17569555-17569574 Msa1316670:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG + chr8_4:17569561-17569580 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG + chr8_4:17569590-17569609 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG + chr8_4:17569591-17569610 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG + chr8_4:17569592-17569611 None:intergenic 50.0%
AGCTTGTCCCTCACCAACAT+TGG + chr8_4:17569820-17569839 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG - chr8_4:17569849-17569868 Msa1316670:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG - chr8_4:17569987-17570006 Msa1316670:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG - chr8_4:17570016-17570035 Msa1316670:CDS 50.0%
GAAGAGGTAGGGTTAGGGTT+AGG + chr8_4:17567944-17567963 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG + chr8_4:17568022-17568041 None:intergenic 50.0%
GCATGGCCAGCTTCTGATTA+TGG - chr8_4:17568139-17568158 Msa1316670:CDS 50.0%
ACACGTGACACAGATGGTCA+TGG - chr8_4:17568388-17568407 Msa1316670:CDS 50.0%
CACGTGACACAGATGGTCAT+GGG - chr8_4:17568389-17568408 Msa1316670:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG - chr8_4:17568415-17568434 Msa1316670:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG - chr8_4:17568430-17568449 Msa1316670:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG - chr8_4:17568445-17568464 Msa1316670:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG - chr8_4:17568595-17568614 Msa1316670:CDS 50.0%
ATCAACTCCGTCCGATACTG+CGG + chr8_4:17568605-17568624 None:intergenic 50.0%
GTGTTTGTGTCTACTGGAGC+AGG - chr8_4:17568712-17568731 Msa1316670:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG - chr8_4:17568838-17568857 Msa1316670:CDS 50.0%
TTGGTACCAAACCAGCACCT+AGG - chr8_4:17569199-17569218 Msa1316670:CDS 50.0%
TGGTACCAAACCAGCACCTA+GGG - chr8_4:17569200-17569219 Msa1316670:CDS 50.0%
CTCCTACACCAGCAACATGA+GGG + chr8_4:17569407-17569426 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG - chr8_4:17569451-17569470 Msa1316670:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG - chr8_4:17569555-17569574 Msa1316670:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG + chr8_4:17569561-17569580 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG + chr8_4:17569590-17569609 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG + chr8_4:17569591-17569610 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG + chr8_4:17569592-17569611 None:intergenic 50.0%
AGCTTGTCCCTCACCAACAT+TGG + chr8_4:17569820-17569839 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG - chr8_4:17569849-17569868 Msa1316670:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG - chr8_4:17569987-17570006 Msa1316670:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG - chr8_4:17570016-17570035 Msa1316670:CDS 50.0%
GCAGCAACAGTTGTCACCCA+TGG + chr8_4:17568778-17568797 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG - chr8_4:17568778-17568797 Msa1316670:CDS 55.0%
!! ATCGACCCTAGGTGCTGGTT+TGG + chr8_4:17569208-17569227 None:intergenic 55.0%
ATGGCATGCCCTCATGTTGC+TGG - chr8_4:17569396-17569415 Msa1316670:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG - chr8_4:17569402-17569421 Msa1316670:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG + chr8_4:17569408-17569427 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG - chr8_4:17569588-17569607 Msa1316670:CDS 55.0%
! ATGGCAGGATGGGAAGCATG+TGG - chr8_4:17569998-17570017 Msa1316670:CDS 55.0%
GCAGCAACAGTTGTCACCCA+TGG + chr8_4:17568778-17568797 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG - chr8_4:17568778-17568797 Msa1316670:CDS 55.0%
!! ATCGACCCTAGGTGCTGGTT+TGG + chr8_4:17569208-17569227 None:intergenic 55.0%
ATGGCATGCCCTCATGTTGC+TGG - chr8_4:17569396-17569415 Msa1316670:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG - chr8_4:17569402-17569421 Msa1316670:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG + chr8_4:17569408-17569427 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG - chr8_4:17569588-17569607 Msa1316670:CDS 55.0%
! ATGGCAGGATGGGAAGCATG+TGG - chr8_4:17569998-17570017 Msa1316670:CDS 55.0%
GCTGGCCATGCCCCTTTGTA+GGG + chr8_4:17568130-17568149 None:intergenic 60.0%
AGCTGGCCATGCCCCTTTGT+AGG + chr8_4:17568131-17568150 None:intergenic 60.0%
GCTGGCCATGCCCCTTTGTA+GGG + chr8_4:17568130-17568149 None:intergenic 60.0%
AGCTGGCCATGCCCCTTTGT+AGG + chr8_4:17568131-17568150 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 17567815 17570064 17567815 ID=Msa1316670;Name=Msa1316670
chr8_4 mRNA 17567815 17570064 17567815 ID=Msa1316670-mRNA-1;Parent=Msa1316670;Name=Msa1316670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|749
chr8_4 exon 17567815 17570064 17567815 ID=Msa1316670-mRNA-1:exon:6360;Parent=Msa1316670-mRNA-1
chr8_4 CDS 17567815 17570064 17567815 ID=Msa1316670-mRNA-1:cds;Parent=Msa1316670-mRNA-1
Gene Sequence

>Msa1316670

ATGGCTCACTCTTCTCATAACTATATCATTCATATGAATTTATCTGCTATGCCAAAACCTTACTCAAACCAAAATGCTTGGTATGAATCCACTCTTTATCAAGTAATTACTACCAACAACAATAACCCTAACCCTAACCCTACCTCTTCTAAGATCATTTATACATACACCAATGTTATGAATGGTTTTAGTGCTAATCTCTCACCTCAAGAGCATGAAGCCCTCAAAACCTTACATGGTTATATTTCTTCACAACCTGACACACACTTGAAACTTCTCACAACACACTCACCACAATTCATAGGCCTTAATCCCTACAAAGGGGCATGGCCAGCTTCTGATTATGGCAAAGATGTTATTGTTGGTGTCATTGACACTGGTGTTTGGCCAGAAAGTGAGAGTTTTAATGATAATGGAATGACTCAAATTCCTTCAAAATGGAAAGGCAAGTTATGTCAATTTGAAAATACCAACCATTCATCTCTGTGCAACAACAAACTTATTGGAGCTAGGTTTTTCAACAAAGGATTCTTGGCGGTAAATCCCAACATTAGTTCAACAATTGTCAATAGCACACGTGACACAGATGGTCATGGGACACACACTTCAACAACAGCAGCTGGGAATCAAGTTGACGGTGCGTCATTCTTTGGTTATGCAAATGGAAGCGCAAGAGGAATAGCTACATTGTCTAAAGTAGCTATGTACAAGGTTGGATGGACGAACCCTGCAGATGTAGTTTCATCTCCAGATGTAGTTTCATCTGATTTATTAGCTGCAATTGATGCCGCAGTATCGGACGGAGTTGATGTACTTTCAATATCAATAGGCTTTGGCGATCTACCTTTTTATGAAGATCCAATCGCAATAGCCACTTTTGCAGCTATGGAAAAGGGTGTGTTTGTGTCTACTGGAGCAGGTAATAATGGCCCCTTCTTTAAAAAGCTTAGCAATGTAGCACCATGGGTGACAACTGTTGCTGCTGGTACTTTGGACCGTGAATTTGGTGGGATACTTACACTTGGTAATGGAGTCTCACTCACCGGTTTGTCTTCCTATATAGGAAATTTCTCTGCTAGTAATTTTCAAATTGTTTTCATGGATATGTGTGAAAATGTTACAGAATTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAGGATAAAAATGGAGATCCAACTGATCAAGTTTCTAATATGTTTCAAGCAAATGTTGTTGGAGGTGTTTTCATATCAAACATCTCAGAAATAAGTGATATGATTTTAGTCTTGAATTTTCCATCCATCTTTATTAGTTCAATAAATGGAGAAATTGCCAAATCATACATCAAGAGTAACTCTAACTCGGTTTCAACGGCAAACATGTCTCTCGGATTAACATTTTTTGGTACCAAACCAGCACCTAGGGTCGATTATTATAGTTCAAGAGGGCCATCAAATAGTTGTCCATATGTGTTGAAACCTGATATTACAGCTCCTGGTACATCAATCTTAGCTTCATATCCCACAAATGTACCTGTGTTAATTCTTGAGTCTGGTAATAAAGTCTTCAACAAGTTTAATGTTTTAAGTGGAACATCTATGGCATGCCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCACATGCTGATTGGAGCCCTGCAGCTATTAGGTCAGCAATGATGACAACATCAGACATATTTGATAATACTAAGGAACTCATAAAAGACATTGGAAAAGGTAACAACGTAGCAACACCTTTTGCACAAGGAGCTGGTCATATCAACCCCAACAGAGCAATTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGTTCTAAACCTTCCTTGGATCTTAATTACCCTTCTTTTATAGCTTTTTTCAATGTTGGAAATGCTTCTTCAAGGACCATCCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGACAAGCTATTTATGTTGCTAGCATTACGCCTGTTGAAGGATACCGTGTTAGTGTTATCCCCAATAAGTTGGTATTCAATAAGAAGAGTGAGAAGCTAAGCTACAAGTTGAGGATTGAAGGCCCTAGAATGACACAAAATAATGAAGTAGCTTTTGGTTACATCACATGGCAGGATGGGAAGCATGTGGTGAGAAGCCCTATTGTGGTAACTACCCCCAATTTCAATTTGTAG
Protein sequence

>Msa1316670

MAHSSHNYIIHMNLSAMPKPYSNQNAWYESTLYQVITTNNNNPNPNPTSSKIIYTYTNVMNGFSANLSPQEHEALKTLHGYISSQPDTHLKLLTTHSPQFIGLNPYKGAWPASDYGKDVIVGVIDTGVWPESESFNDNGMTQIPSKWKGKLCQFENTNHSSLCNNKLIGARFFNKGFLAVNPNISSTIVNSTRDTDGHGTHTSTTAAGNQVDGASFFGYANGSARGIATLSKVAMYKVGWTNPADVVSSPDVVSSDLLAAIDAAVSDGVDVLSISIGFGDLPFYEDPIAIATFAAMEKGVFVSTGAGNNGPFFKKLSNVAPWVTTVAAGTLDREFGGILTLGNGVSLTGLSSYIGNFSASNFQIVFMDMCENVTELIKVKSKIVVCEDKNGDPTDQVSNMFQANVVGGVFISNISEISDMILVLNFPSIFISSINGEIAKSYIKSNSNSVSTANMSLGLTFFGTKPAPRVDYYSSRGPSNSCPYVLKPDITAPGTSILASYPTNVPVLILESGNKVFNKFNVLSGTSMACPHVAGVGALLKGAHADWSPAAIRSAMMTTSDIFDNTKELIKDIGKGNNVATPFAQGAGHINPNRAIDPGLVYDVGVQDYVNLLCALNFTQKNITTITRSSSNDCSKPSLDLNYPSFIAFFNVGNASSRTIQEFHRTVTNVGEGQAIYVASITPVEGYRVSVIPNKLVFNKKSEKLSYKLRIEGPRMTQNNEVAFGYITWQDGKHVVRSPIVVTTPNFNL*