AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1280190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280190 MtrunA17_Chr8g0350321 99.383 810 5 0 1 810 1 810 0.0 1667
Msa1280190 MtrunA17_Chr7g0246631 81.054 797 116 13 30 810 1 778 0.0 1275
Msa1280190 MtrunA17_Chr1g0203671 64.975 788 246 13 39 807 14 790 0.0 979
Msa1280190 MtrunA17_Chr2g0322731 55.659 751 274 13 77 809 59 768 0.0 788
Msa1280190 MtrunA17_Chr4g0024351 54.740 749 295 12 74 810 17 733 0.0 776
Msa1280190 MtrunA17_Chr6g0472471 52.406 769 336 13 58 806 7 765 0.0 761
Msa1280190 MtrunA17_Chr6g0481041 49.239 723 316 13 115 810 29 727 0.0 673
Msa1280190 MtrunA17_Chr2g0331581 45.833 696 326 11 119 809 143 792 0.0 630
Msa1280190 MtrunA17_Chr5g0410711 44.652 748 383 19 79 810 49 781 0.0 622
Msa1280190 MtrunA17_Chr5g0394111 46.800 500 249 7 314 806 157 646 2.69e-149 452
Msa1280190 MtrunA17_Chr5g0394111 46.154 156 78 3 80 235 3 152 1.17e-29 125
Msa1280190 MtrunA17_Chr7g0224451 43.400 500 206 11 109 599 10 441 9.88e-124 379
Msa1280190 MtrunA17_Chr2g0292731 37.475 491 287 11 324 806 70 548 1.71e-97 314
Msa1280190 MtrunA17_Chr2g0292741 36.605 489 289 11 324 806 62 535 4.71e-93 302
Msa1280190 MtrunA17_Chr7g0224481 41.688 391 160 8 109 492 10 339 5.59e-85 274
Msa1280190 MtrunA17_Chr7g0224491 47.352 321 136 9 495 808 1 295 1.98e-82 265
Msa1280190 MtrunA17_Chr2g0292761 30.323 620 345 18 194 806 1 540 2.47e-75 254
Msa1280190 MtrunA17_Chr5g0419821 53.543 127 58 1 110 235 28 154 4.22e-41 148
Msa1280190 MtrunA17_Chr2g0319671 32.946 258 132 4 319 543 19 268 6.57e-38 144
Msa1280190 MtrunA17_Chr2g0319701 39.004 241 127 7 576 810 1 227 1.47e-37 140
Msa1280190 MtrunA17_Chr2g0319681 36.250 240 137 5 576 810 1 229 5.85e-35 133
Msa1280190 MtrunA17_Chr1g0205981 35.814 215 103 5 170 376 1 188 2.27e-29 115
Msa1280190 MtrunA17_Chr2g0319691 42.478 113 61 1 431 543 1 109 1.35e-26 106
Msa1280190 MtrunA17_Chr7g0224461 48.780 123 51 3 691 808 1 116 8.73e-26 102
Msa1280190 MtrunA17_Chr2g0304191 36.641 131 82 1 326 455 1 131 9.22e-22 92.0
Msa1280190 MtrunA17_Chr8g0340411 21.756 763 413 27 118 806 15 667 3.12e-21 99.4
Msa1280190 MtrunA17_Chr7g0224431 35.976 164 59 5 341 502 1 120 6.17e-17 77.8
Msa1280190 MtrunA17_Chr3g0140351 21.730 497 295 17 375 806 205 672 1.64e-14 77.8
Msa1280190 MtrunA17_Chr2g0331131 21.687 498 295 17 375 806 203 671 2.36e-12 70.9
Msa1280190 MtrunA17_Chr1g0179581 34.884 86 56 0 116 201 26 111 1.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280190 AT4G00730.1 68.396 829 216 12 1 810 1 802 0.0 1104
Msa1280190 AT3G61150.1 65.663 830 242 17 1 810 1 807 0.0 1049
Msa1280190 AT4G04890.2 55.689 747 278 14 82 809 26 738 0.0 803
Msa1280190 AT4G04890.1 55.689 747 278 14 82 809 26 738 0.0 803
Msa1280190 AT4G21750.2 55.204 759 285 10 82 809 26 760 0.0 798
Msa1280190 AT4G21750.1 55.204 759 285 10 82 809 26 760 0.0 798
Msa1280190 AT4G21750.3 55.204 759 285 10 82 809 26 760 0.0 798
Msa1280190 AT4G21750.4 55.204 759 285 10 82 809 26 760 0.0 798
Msa1280190 AT1G05230.8 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.4 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.9 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.10 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.7 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.11 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.2 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.6 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.5 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.1 52.487 764 316 14 50 810 1 720 0.0 768
Msa1280190 AT1G05230.3 52.487 764 314 15 50 810 1 718 0.0 764
Msa1280190 AT5G52170.3 54.270 726 254 12 88 807 26 679 0.0 751
Msa1280190 AT5G52170.1 54.270 726 254 12 88 807 26 679 0.0 751
Msa1280190 AT5G52170.2 53.899 731 254 13 88 807 26 684 0.0 744
Msa1280190 AT4G00730.2 64.014 578 169 10 1 559 1 558 0.0 715
Msa1280190 AT1G73360.1 49.073 701 329 12 115 806 32 713 0.0 624
Msa1280190 AT1G05230.12 50.786 636 277 13 50 682 1 603 0.0 614
Msa1280190 AT1G17920.2 46.759 725 327 17 100 810 6 685 0.0 612
Msa1280190 AT1G17920.1 46.759 725 327 17 100 810 6 685 0.0 612
Msa1280190 AT2G32370.1 43.036 718 340 11 109 810 60 724 0.0 576
Msa1280190 AT1G79840.1 43.081 701 337 13 115 809 101 745 0.0 565
Msa1280190 AT1G79840.3 43.081 701 337 13 115 809 43 687 0.0 564
Msa1280190 AT1G79840.6 43.081 701 337 13 115 809 43 687 0.0 564
Msa1280190 AT1G79840.2 40.629 795 390 16 41 809 36 774 0.0 563
Msa1280190 AT5G46880.3 42.162 740 373 19 100 806 89 806 9.45e-179 535
Msa1280190 AT5G46880.1 42.162 740 373 19 100 806 89 806 9.45e-179 535
Msa1280190 AT5G46880.2 42.162 740 373 19 100 806 89 806 9.45e-179 535
Msa1280190 AT4G25530.1 39.221 719 378 13 97 810 22 686 1.64e-162 488
Msa1280190 AT1G79840.4 40.211 664 321 14 41 678 7 620 5.74e-156 469
Msa1280190 AT4G17710.1 38.810 706 340 17 110 806 81 703 1.21e-145 445
Msa1280190 AT3G03260.1 36.743 743 390 21 97 808 3 696 3.94e-144 441
Msa1280190 AT5G17320.1 35.908 738 420 20 100 809 6 718 4.00e-131 408
Msa1280190 AT1G34650.1 34.746 708 420 17 122 809 23 708 1.26e-119 377
Msa1280190 AT1G79840.5 41.518 448 208 9 115 557 101 499 9.30e-108 340
Msa1280190 AT3G03260.2 36.140 570 314 15 97 650 3 538 1.41e-106 338
Msa1280190 AT5G07260.1 28.369 564 317 17 181 739 10 491 7.71e-56 201
Msa1280190 AT5G07260.2 28.114 562 316 16 181 739 10 486 8.41e-56 201
Msa1280190 AT1G30490.1 37.143 105 51 3 103 192 6 110 1.51e-12 72.0
Msa1280190 AT4G32880.1 23.062 503 291 19 369 806 199 670 1.93e-12 71.6

Find 239 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCGATTT+TGG 0.132742 8_3:+18278515 None:intergenic
CCAAGATTTACTTGTGATTA+AGG 0.152156 8_3:-18279298 Msa1280190:five_prime_UTR
GATAACTTGGATGGTGTTTC+TGG 0.199972 8_3:-18278796 Msa1280190:CDS
TCCAATCTTTGTTTCTCATC+TGG 0.219888 8_3:+18278586 None:intergenic
GTTATATCTAATGGAATAAA+TGG 0.224318 8_3:-18277428 Msa1280190:CDS
AAAATGTAATTGGTGGGATT+TGG 0.226937 8_3:-18273351 Msa1280190:three_prime_UTR
AAATGTAATTGGTGGGATTT+GGG 0.251833 8_3:-18273350 Msa1280190:three_prime_UTR
GAACAAAGACAGAGAGATTA+TGG 0.263067 8_3:+18279390 None:intergenic
TTTGAAACGCCACAGTTAAA+AGG 0.265578 8_3:+18273592 None:intergenic
GTGGGGTATTTGATGAGTTT+TGG 0.276571 8_3:-18279206 Msa1280190:exon
TTAAGCTCAGGCATGGGTTT+TGG 0.280828 8_3:-18275221 Msa1280190:CDS
AAAGATTGGAGCTTAGTAAA+AGG 0.282647 8_3:-18278573 Msa1280190:CDS
TTTACTTGTGATTAAGGGTT+TGG 0.290354 8_3:-18279292 Msa1280190:five_prime_UTR
CCACCACAATTTGAACAAAT+AGG 0.293686 8_3:+18278283 None:intergenic
CACAAACTAATGACCCTCTT+TGG 0.295700 8_3:-18277892 Msa1280190:CDS
GAGCTGAGAATATGTCTATA+AGG 0.296096 8_3:-18278321 Msa1280190:CDS
TTTGTGTTATAGTTTGTTTA+AGG 0.305442 8_3:-18278620 Msa1280190:intron
AGCAACATGCAGAAGGGGTT+TGG 0.310078 8_3:-18277132 Msa1280190:CDS
GCTTAGTAAAAGGCTTTGTT+TGG 0.322328 8_3:-18278563 Msa1280190:CDS
CATGGGAATTATGAGCAAAA+TGG 0.323679 8_3:-18278862 Msa1280190:CDS
ACAAATGAAGTTATATCTAA+TGG 0.323910 8_3:-18277437 Msa1280190:CDS
AAACAAGACAAGTTAAGTTT+TGG 0.327392 8_3:-18278540 Msa1280190:CDS
GATATCTATCTATCTTATCT+AGG 0.327999 8_3:-18273263 Msa1280190:three_prime_UTR
GGCCCTCGTCGAGACTCTTA+TGG 0.331651 8_3:-18277729 Msa1280190:CDS
GATAGAGTTTGTGCACTTGC+TGG 0.335931 8_3:-18278184 Msa1280190:CDS
TGTGCTATCGCCTTTGGTTC+CGG 0.337850 8_3:-18277185 Msa1280190:CDS
CTAATGACCCTCTTTGGATT+AGG 0.339140 8_3:-18277886 Msa1280190:CDS
AACAGTCTTTGAGGCGAAAC+CGG 0.340570 8_3:+18274657 None:intergenic
TGAACTTGCTTTGGCTGCTA+TGG 0.341605 8_3:-18277933 Msa1280190:CDS
GTTGGAGGAAACAACAATAA+TGG 0.341837 8_3:-18278106 Msa1280190:CDS
CCAATCTTTGTTTCTCATCT+GGG 0.343195 8_3:+18278587 None:intergenic
TTCAAATAGACAAACATCTA+TGG 0.348262 8_3:-18277999 Msa1280190:CDS
TGCATAGGTTTGAAACCTAA+TGG 0.348768 8_3:-18277803 Msa1280190:CDS
TATGTTTCTTGAACTTGCTT+TGG 0.349553 8_3:-18277942 Msa1280190:CDS
ACGATCCCTGGTGGCTCGCC+TGG 0.350440 8_3:+18274708 None:intergenic
TCTTGTTACTTCTCCAGCTT+TGG 0.358823 8_3:-18279078 Msa1280190:CDS
CAAGATTTACTTGTGATTAA+GGG 0.370497 8_3:-18279297 Msa1280190:five_prime_UTR
CAAGGCAAGGATCGTGGTTC+GGG 0.371722 8_3:-18273224 Msa1280190:three_prime_UTR
ACTTCATGTGCTATCGCCTT+TGG 0.371763 8_3:-18277191 Msa1280190:CDS
GGTTAAGTTTGTTCCATTTG+TGG 0.375533 8_3:+18274784 None:intergenic
ACGATCCTTGCCTTGTGTTA+AGG 0.377368 8_3:+18273232 None:intergenic
GTCTCGAGAGGGAGCGGCAG+AGG 0.383923 8_3:+18275139 None:intergenic
TATCTATCTTATCTAGGGTT+AGG 0.388576 8_3:-18273257 Msa1280190:three_prime_UTR
ATAGATGTTTGTCTATTTGA+AGG 0.389308 8_3:+18278001 None:intergenic
GCAACATGCAGAAGGGGTTT+GGG 0.389701 8_3:-18277131 Msa1280190:CDS
AGGAAATTTACCTCGCGAAC+CGG 0.392120 8_3:+18277166 None:intergenic
ATGAAGCAAACAAATATTGA+TGG 0.395849 8_3:-18278910 Msa1280190:intron
TCTGAGGCCTCAAGGGAAAC+TGG 0.398976 8_3:-18277773 Msa1280190:CDS
GGGTTTGTAGAGAACAATTC+AGG 0.408018 8_3:-18279182 Msa1280190:CDS
GGAATAAATGGAAGAAGAAA+TGG 0.409167 8_3:-18277416 Msa1280190:CDS
CTTTGGATTAGGAGTATAGA+AGG 0.410489 8_3:-18277875 Msa1280190:CDS
AACATTGATTTAGCCAAAGC+TGG 0.411308 8_3:+18279065 None:intergenic
TACACTGTTTCTCTCTCAAA+AGG 0.413538 8_3:-18279583 Msa1280190:five_prime_UTR
TTGGTAATGGATGAAAGAAA+AGG 0.414205 8_3:-18273377 Msa1280190:three_prime_UTR
AGCGGCAGAGGACATTAATA+TGG 0.417806 8_3:+18275151 None:intergenic
ATTACCTTGGAGTAACCATT+TGG 0.419128 8_3:+18277007 None:intergenic
ACAAGGCAAGGATCGTGGTT+CGG 0.423215 8_3:-18273225 Msa1280190:three_prime_UTR
ATTAGATATAACTTCATTTG+TGG 0.423746 8_3:+18277439 None:intergenic
GAAGAGGAACAAAGTAGATC+TGG 0.428814 8_3:-18278823 Msa1280190:CDS
TTAGGAGTATAGAAGGAGGA+AGG 0.429115 8_3:-18277868 Msa1280190:CDS
AAGGAGACACAATGGCTAAA+GGG 0.434268 8_3:+18278020 None:intergenic
GGCCTCGCCGCCTCCATTTG+CGG 0.434702 8_3:+18273629 None:intergenic
GAAATCTCGCCGATCATAGC+TGG 0.437015 8_3:+18278259 None:intergenic
CCACGTGACCCAGGACCGTC+AGG 0.438864 8_3:+18273672 None:intergenic
GTGCCTCGACGGTCCACAAA+TGG 0.441844 8_3:-18274797 Msa1280190:CDS
AATGGCGATGCAACCGCAAA+TGG 0.441940 8_3:-18273642 Msa1280190:CDS
TGCAGAAGGGGTTTGGGCTG+TGG 0.445274 8_3:-18277125 Msa1280190:CDS
GCCTCAGAAACAAAACCATT+AGG 0.446780 8_3:+18277788 None:intergenic
GACATTCCTGAACTAAAATC+AGG 0.446855 8_3:+18278049 None:intergenic
CGAAAGAGTGTCGATGATCC+AGG 0.449464 8_3:-18274726 Msa1280190:CDS
AATCGAGAATGCGAGGTTGA+AGG 0.450326 8_3:-18278215 Msa1280190:CDS
CCTTAATCACAAGTAAATCT+TGG 0.454748 8_3:+18279298 None:intergenic
AACATCAATGAAAGGAATAG+TGG 0.455334 8_3:-18273165 Msa1280190:three_prime_UTR
AGCCACGTCGGTGTGGCTCC+CGG 0.460196 8_3:-18274676 Msa1280190:CDS
AGTTTAGAGCTTGGTGTTGG+AGG 0.461266 8_3:-18278121 Msa1280190:CDS
ACATCTTCGTCTACATTACC+AGG 0.462223 8_3:+18274762 None:intergenic
TTCGCGAGGTAAATTTCCTT+AGG 0.465241 8_3:-18277162 Msa1280190:CDS
CCCAGATGAGAAACAAAGAT+TGG 0.465465 8_3:-18278587 Msa1280190:CDS
GATACCATCAGAGAAACTTC+TGG 0.468680 8_3:-18277088 Msa1280190:CDS
ACAATTGTACTAGACTCAAC+TGG 0.470551 8_3:-18278389 Msa1280190:intron
CTTTGTTTCTCATCTGGGTG+AGG 0.471059 8_3:+18278592 None:intergenic
TGGTAATGGATGAAAGAAAA+GGG 0.474289 8_3:-18273376 Msa1280190:three_prime_UTR
AGCTGAGAATATGTCTATAA+GGG 0.474540 8_3:-18278320 Msa1280190:CDS
ACCTTTGTTAAGCTCAGGCA+TGG 0.478103 8_3:-18275228 Msa1280190:CDS
GAAGGAGACACAATGGCTAA+AGG 0.478406 8_3:+18278019 None:intergenic
TTGAAACGCCACAGTTAAAA+GGG 0.478927 8_3:+18273593 None:intergenic
GTCAGGGACGATGGCGAAGC+CGG 0.479104 8_3:+18273689 None:intergenic
GCTGCGCTCAACACGATCCC+TGG 0.483232 8_3:+18274696 None:intergenic
CGGTGATATCTCTTCTTCCT+AGG 0.483554 8_3:+18278745 None:intergenic
TTTGGCTGCTATGGATGAGT+TGG 0.483619 8_3:-18277924 Msa1280190:CDS
AACTGTAGGAAGCTTCCCTC+TGG 0.485745 8_3:-18277049 Msa1280190:CDS
AACAATTCAGGAGGTGGTGG+AGG 0.485870 8_3:-18279170 Msa1280190:CDS
TAGATCTGGTAGTGATAACT+TGG 0.486150 8_3:-18278809 Msa1280190:CDS
ACCAAGCTCTAAACTTGAGT+TGG 0.486237 8_3:+18278129 None:intergenic
AGGTTCCTTGCATGGTGGTA+AGG 0.488538 8_3:-18273285 Msa1280190:three_prime_UTR
ATGACAAACAACTTCTGTGC+AGG 0.491411 8_3:-18274825 Msa1280190:CDS
CCCAACTCAAGTTTAGAGCT+TGG 0.493385 8_3:-18278130 Msa1280190:CDS
ATGCTGATGACAAGCCTCCT+AGG 0.495931 8_3:-18278762 Msa1280190:CDS
CAAACATCTATGGTGACTAC+TGG 0.499553 8_3:-18277989 Msa1280190:CDS
CCAAGCTCTAAACTTGAGTT+GGG 0.502535 8_3:+18278130 None:intergenic
AATCCTATTTGTTCAAATTG+TGG 0.504449 8_3:-18278286 Msa1280190:CDS
TTCATGACAACATGCATAGC+TGG 0.505873 8_3:+18273747 None:intergenic
ACAGTCTTTGAGGCGAAACC+GGG 0.506478 8_3:+18274658 None:intergenic
CAGAGAGATTATGGAGACAA+AGG 0.507293 8_3:+18279399 None:intergenic
TATAGACCTTTGTTAAGCTC+AGG 0.507401 8_3:-18275233 Msa1280190:CDS
GTAGTATCAACATGCTACTC+TGG 0.510426 8_3:+18273826 None:intergenic
AACAACGAAAGAATGCCGTT+TGG 0.511193 8_3:-18279119 Msa1280190:CDS
TAGGAGTATAGAAGGAGGAA+GGG 0.511252 8_3:-18277867 Msa1280190:CDS
CGTCGAGACTCTTATGGACT+CGG 0.512419 8_3:-18277723 Msa1280190:intron
GGTGGAGGTGTAAGAAACAT+AGG 0.512874 8_3:-18279155 Msa1280190:CDS
AGTCAAGAACGAACCACTCA+TGG 0.514515 8_3:-18273318 Msa1280190:three_prime_UTR
TCAAGTTTAGAGCTTGGTGT+TGG 0.514774 8_3:-18278124 Msa1280190:CDS
ATATGGCAAGGCACTCGCAC+TGG 0.516470 8_3:+18275168 None:intergenic
TACTGTCATCATCAATAGCT+TGG 0.517600 8_3:-18277750 Msa1280190:CDS
GAATGGGATATACTATCAAA+TGG 0.517618 8_3:-18274603 Msa1280190:CDS
TGCAGGGGTCTGTGCCTCGA+CGG 0.517623 8_3:-18274808 Msa1280190:CDS
AACAGATTCAAGAGCTTGAA+AGG 0.519002 8_3:-18278711 Msa1280190:intron
AGAGTGGTCTCGAGAGGGAG+CGG 0.519414 8_3:+18275133 None:intergenic
TCAAGCTCTTGAATCTGTTG+AGG 0.520625 8_3:+18278715 None:intergenic
CTAAAATCAGGTAATGATGA+AGG 0.524206 8_3:+18278061 None:intergenic
GATGCAACCGCAAATGGAGG+CGG 0.528418 8_3:-18273636 Msa1280190:CDS
GGTGGAACATACAGAATATG+AGG 0.529449 8_3:-18275276 Msa1280190:CDS
AAATCGAAGAACACAAATGA+AGG 0.532956 8_3:-18278512 Msa1280190:intron
TATCAACATGCTACTCTGGT+TGG 0.534209 8_3:+18273830 None:intergenic
TACGTGGCATTACTACCATC+CGG 0.534267 8_3:-18273708 Msa1280190:CDS
TGAACCATGAGGAATATTTG+AGG 0.534711 8_3:-18277838 Msa1280190:CDS
ACGAAAGGCTCCGTAGCGAA+TGG 0.534843 8_3:-18274620 Msa1280190:CDS
AGAGAGATTATGGAGACAAA+GGG 0.535460 8_3:+18279400 None:intergenic
AGAAAATCAAACAGTCTTTG+AGG 0.537109 8_3:+18274648 None:intergenic
GACTACTGGCTTTGATAGAT+CGG 0.537264 8_3:-18277975 Msa1280190:CDS
GTCGCTTGTTGTCTATGCGC+CGG 0.538678 8_3:-18273778 Msa1280190:CDS
ACCTCGCATTCTCGATTCGA+AGG 0.539473 8_3:+18278221 None:intergenic
AGGACATTCACTCCTTGCAT+AGG 0.541705 8_3:-18277818 Msa1280190:CDS
AAATCAATGTTCAACTCACC+TGG 0.542999 8_3:-18279053 Msa1280190:CDS
GAGAACAATTCAGGAGGTGG+TGG 0.543843 8_3:-18279173 Msa1280190:CDS
TTAACAAAGGTCTATACAGC+TGG 0.544719 8_3:+18275240 None:intergenic
GGCATGAGAACAATTTGCTT+AGG 0.546874 8_3:-18278363 Msa1280190:CDS
CATGTTGCTTGCAAAACCTA+AGG 0.549258 8_3:+18277146 None:intergenic
GATGATCCAGGCGAGCCACC+AGG 0.549531 8_3:-18274714 Msa1280190:CDS
GAAACATGCATAGACGAGGC+GGG 0.550627 8_3:-18273801 Msa1280190:CDS
GTAGAGAACAATTCAGGAGG+TGG 0.551896 8_3:-18279176 Msa1280190:CDS
ACACTGTTTCTCTCTCAAAA+GGG 0.552068 8_3:-18279582 Msa1280190:five_prime_UTR
ATATCTATCTATCTTATCTA+GGG 0.552153 8_3:-18273262 Msa1280190:three_prime_UTR
ATTGCTAAAGGACAAGATCA+TGG 0.552765 8_3:-18274555 Msa1280190:CDS
CCCAGGACCGTCAGGGACGA+TGG 0.554778 8_3:+18273680 None:intergenic
TTAAAAGGGACCCGCTAACA+CGG 0.556802 8_3:+18273607 None:intergenic
GCCTTTGGTTCCGGTTCGCG+AGG 0.561467 8_3:-18277176 Msa1280190:CDS
GGGTCACGTGGACTAGAGAA+TGG 0.565791 8_3:-18273660 Msa1280190:CDS
GGCTTCGCCATCGTCCCTGA+CGG 0.566065 8_3:-18273687 Msa1280190:CDS
AGGTTCCTTAACACAAGGCA+AGG 0.568916 8_3:-18273237 Msa1280190:three_prime_UTR
CCTATTTGTTCAAATTGTGG+TGG 0.569225 8_3:-18278283 Msa1280190:CDS
CTGTTGGAAGACTATTCACA+AGG 0.574018 8_3:+18273568 None:intergenic
CCTTTGTTAAGCTCAGGCAT+GGG 0.575692 8_3:-18275227 Msa1280190:CDS
ACCTCGCGAACCGGAACCAA+AGG 0.576063 8_3:+18277175 None:intergenic
TGATGAATTTGCAGGTGACG+TGG 0.576199 8_3:-18275298 Msa1280190:intron
AGATATAACTTCATTTGTGG+AGG 0.576220 8_3:+18277442 None:intergenic
AGCACCAGAAGTTTCTCTGA+TGG 0.578112 8_3:+18277084 None:intergenic
TTGCAAGCAACATGCAGAAG+GGG 0.579559 8_3:-18277137 Msa1280190:CDS
TATGGATGAGTTGGTTAAGA+TGG 0.580312 8_3:-18277915 Msa1280190:CDS
TTTGAGAAGAAGTAGAGAAG+AGG 0.581124 8_3:-18278839 Msa1280190:CDS
ACAAGTGCAAGTGATAATCC+AGG 0.581955 8_3:+18279035 None:intergenic
GATGGACAAGAAGATGTGAA+TGG 0.584326 8_3:-18278892 Msa1280190:CDS
GAGGTTCTTGCAATGATACA+AGG 0.584664 8_3:+18277461 None:intergenic
TGGATTAGGAGTATAGAAGG+AGG 0.585727 8_3:-18277872 Msa1280190:CDS
TGCATAGCTGGAATATCGAC+CGG 0.586168 8_3:+18273759 None:intergenic
TTTGCAAGCAACATGCAGAA+GGG 0.586652 8_3:-18277138 Msa1280190:CDS
GATATCCTTACCACCATGCA+AGG 0.588151 8_3:+18273280 None:intergenic
ATATGAGCCATCTCTTGCAT+AGG 0.588298 8_3:+18274576 None:intergenic
ATAGTATATCCCATTCGCTA+CGG 0.590010 8_3:+18274610 None:intergenic
TGTCTCACAGCAATAACAGC+AGG 0.590368 8_3:-18274882 Msa1280190:intron
GGCGATGCAACCGCAAATGG+AGG 0.590559 8_3:-18273639 Msa1280190:CDS
ACAAAGGTCTATACAGCTGG+TGG 0.592381 8_3:+18275243 None:intergenic
GAGATGGCTCATATTGCTAA+AGG 0.593426 8_3:-18274567 Msa1280190:CDS
CAGCAATAACAGCAGGAGGA+AGG 0.594087 8_3:-18274875 Msa1280190:CDS
TGACAAACAACTTCTGTGCA+GGG 0.594648 8_3:-18274824 Msa1280190:CDS
ATGTCCTCAAATATTCCTCA+TGG 0.596418 8_3:+18277834 None:intergenic
TTCTCTAGTCCACGTGACCC+AGG 0.602479 8_3:+18273663 None:intergenic
TGTGGTGGTCCAGCTATGAT+CGG 0.602769 8_3:-18278268 Msa1280190:CDS
TGGTGGTCCTATGCAAGAGA+TGG 0.604536 8_3:-18274583 Msa1280190:CDS
GCTCCCTCTCGAGACCACTC+TGG 0.605199 8_3:-18275131 Msa1280190:intron
CTATACTCCTAATCCAAAGA+GGG 0.605820 8_3:+18277879 None:intergenic
GGGACGATGGCGAAGCCGGA+TGG 0.606268 8_3:+18273693 None:intergenic
CAGAGGACATTAATATGGCA+AGG 0.607435 8_3:+18275156 None:intergenic
AAAGAAAACTTACACTAGCA+CGG 0.608182 8_3:+18274514 None:intergenic
TCTATACTCCTAATCCAAAG+AGG 0.610543 8_3:+18277878 None:intergenic
GTTCCATTTGTGGACCGTCG+AGG 0.611870 8_3:+18274794 None:intergenic
AAACATGCATAGACGAGGCG+GGG 0.612012 8_3:-18273800 Msa1280190:CDS
TGTACTAGACTCAACTGGAA+AGG 0.614174 8_3:-18278384 Msa1280190:intron
TTAGGTTTCAAACCTATGCA+AGG 0.615646 8_3:+18277806 None:intergenic
ATGATCCAGGCGAGCCACCA+GGG 0.616138 8_3:-18274713 Msa1280190:CDS
GAGTTGGGTAGCGAAGAAAT+CGG 0.617841 8_3:+18278145 None:intergenic
GGTTGAGAGAAAGAACCAAA+CGG 0.619875 8_3:+18279104 None:intergenic
TATGCCAAATGGTTACTCCA+AGG 0.620630 8_3:-18277011 Msa1280190:intron
GTTGTGCAAGATATGCCAAA+TGG 0.621690 8_3:-18277022 Msa1280190:CDS
TGATATCTCTTCTTCCTAGG+AGG 0.628484 8_3:+18278748 None:intergenic
ATACCAGAGTGGTCTCGAGA+GGG 0.629439 8_3:+18275128 None:intergenic
AACCGCAAATGGAGGCGGCG+AGG 0.629701 8_3:-18273631 Msa1280190:CDS
TTAACACAAGGCAAGGATCG+TGG 0.631493 8_3:-18273230 Msa1280190:three_prime_UTR
TAAAAGGGACCCGCTAACAC+GGG 0.632561 8_3:+18273608 None:intergenic
TCTATTTGAAGGAGACACAA+TGG 0.633437 8_3:+18278012 None:intergenic
GATGTGAATGGATCAATGCA+TGG 0.635991 8_3:-18278880 Msa1280190:CDS
GACAGTACCAGTTTCCCTTG+AGG 0.636068 8_3:+18277766 None:intergenic
ATGTGAATGGATCAATGCAT+GGG 0.636948 8_3:-18278879 Msa1280190:CDS
CATACCAGAGTGGTCTCGAG+AGG 0.638246 8_3:+18275127 None:intergenic
ATCTTGCACAACACAACCAG+AGG 0.640454 8_3:+18277033 None:intergenic
AATGTAATTGGTGGGATTTG+GGG 0.641941 8_3:-18273349 Msa1280190:three_prime_UTR
TGTCTATAAGGGATGCAATG+AGG 0.645251 8_3:-18278309 Msa1280190:CDS
AAGCTGAGTCGTGACATAAG+TGG 0.649475 8_3:-18273460 Msa1280190:exon
GCGCTCAACACGATCCCTGG+TGG 0.649684 8_3:+18274699 None:intergenic
GGGTTAGGTTCCTTAACACA+AGG 0.650520 8_3:-18273242 Msa1280190:three_prime_UTR
TCTGGTAGTGATAACTTGGA+TGG 0.650981 8_3:-18278805 Msa1280190:CDS
AAATGGAACAAACTTAACCC+TGG 0.651008 8_3:-18274780 Msa1280190:CDS
ACCTTCGAATCGAGAATGCG+AGG 0.651663 8_3:-18278222 Msa1280190:CDS
GCTTTGATAGATCGGTCGAA+AGG 0.652514 8_3:-18277967 Msa1280190:CDS
GATGAATTTGCAGGTGACGT+GGG 0.653253 8_3:-18275297 Msa1280190:intron
CCCATGCCTGAGCTTAACAA+AGG 0.658478 8_3:+18275227 None:intergenic
CTCACAGCAATAACAGCAGG+AGG 0.659474 8_3:-18274879 Msa1280190:intron
GCTATGCATGTTGTCATGAA+CGG 0.661756 8_3:-18273744 Msa1280190:CDS
TGAGCGCAGCCACGTCGGTG+TGG 0.662518 8_3:-18274683 Msa1280190:CDS
AACCGGGAGCCACACCGACG+TGG 0.667720 8_3:+18274674 None:intergenic
GACAAACAACTTCTGTGCAG+GGG 0.668278 8_3:-18274823 Msa1280190:CDS
CATCTTCGTCTACATTACCA+GGG 0.669013 8_3:+18274763 None:intergenic
GAATCTGTTGAGGAGTGTGT+CGG 0.670166 8_3:+18278725 None:intergenic
AGAAACATGCATAGACGAGG+CGG 0.671025 8_3:-18273802 Msa1280190:CDS
TGGGTAGCGAAGAAATCGGA+CGG 0.672523 8_3:+18278149 None:intergenic
CACGTGACCCAGGACCGTCA+GGG 0.675779 8_3:+18273673 None:intergenic
GTCCATAAGAGTCTCGACGA+GGG 0.680758 8_3:+18277727 None:intergenic
GAATTTGCAGGTGACGTGGG+TGG 0.681222 8_3:-18275294 Msa1280190:intron
TGGGATATACTATCAAATGG+TGG 0.690086 8_3:-18274600 Msa1280190:CDS
GTAATGTAGACGAAGATGTG+AGG 0.695572 8_3:-18274758 Msa1280190:CDS
TTTGTAGAGAACAATTCAGG+AGG 0.696040 8_3:-18279179 Msa1280190:CDS
TAATGTAGACGAAGATGTGA+GGG 0.696882 8_3:-18274757 Msa1280190:CDS
TCTTGCACAACACAACCAGA+GGG 0.701438 8_3:+18277034 None:intergenic
GATTTAGAGTCATACCAGAG+TGG 0.705571 8_3:+18275117 None:intergenic
GCTGGAGAAGTAACAAGACG+AGG 0.714868 8_3:+18279083 None:intergenic
ACAAGAAACATGCATAGACG+AGG 0.717423 8_3:-18273805 Msa1280190:CDS
TCCAACAGCAAAACTCACAG+TGG 0.721850 8_3:-18273553 Msa1280190:CDS
AGTCCATAAGAGTCTCGACG+AGG 0.733323 8_3:+18277726 None:intergenic
ATGCATGTTGTCATGAACGG+TGG 0.758546 8_3:-18273741 Msa1280190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTATTATTA+GGG + chr8_3:18278306-18278325 None:intergenic 0.0%
!! TTATTATTATTATTATTATT+AGG + chr8_3:18278307-18278326 None:intergenic 0.0%
!!! TTTTTTTTATGTATTTTTGT+TGG + chr8_3:18273286-18273305 None:intergenic 10.0%
!!! ACTTCTTTTATTTTAATATT+AGG - chr8_3:18275932-18275951 Msa1280190:intron 10.0%
!!! CTTCTTTTATTTTAATATTA+GGG - chr8_3:18275933-18275952 Msa1280190:intron 10.0%
!!! TTTTTTAGTTTTTAGAAAAA+TGG - chr8_3:18278742-18278761 Msa1280190:CDS 10.0%
!!! ATTATTATTTTAAGAAAAAG+TGG - chr8_3:18278780-18278799 Msa1280190:CDS 10.0%
!!! ATTATTTATTTTGATTTTGT+AGG - chr8_3:18278912-18278931 Msa1280190:intron 10.0%
!! AAAAACAAAAAACACAAAAA+TGG + chr8_3:18274102-18274121 None:intergenic 15.0%
!!! TTTTGTGTTTTTTGTTTTTA+AGG - chr8_3:18274103-18274122 Msa1280190:intron 15.0%
!!! TTTTTGAAATTTAATTACCT+TGG + chr8_3:18275783-18275802 None:intergenic 15.0%
!!! GGAAAATTCATATTTTATAT+GGG + chr8_3:18276274-18276293 None:intergenic 15.0%
!!! TGGAAAATTCATATTTTATA+TGG + chr8_3:18276275-18276294 None:intergenic 15.0%
!! ATTATTTAATTCACATGATT+TGG - chr8_3:18276607-18276626 Msa1280190:intron 15.0%
!! ATGAAAATGAGAAATAAAAT+AGG + chr8_3:18276651-18276670 None:intergenic 15.0%
!!! TTTTATTTCTCATTTTCATT+AGG - chr8_3:18276652-18276671 Msa1280190:intron 15.0%
!!! TTTATTTCTCATTTTCATTA+GGG - chr8_3:18276653-18276672 Msa1280190:intron 15.0%
!! TTACATTATGTATATATGTA+TGG + chr8_3:18277200-18277219 None:intergenic 15.0%
!! TGACAACATAAAAATAATAT+TGG - chr8_3:18277220-18277239 Msa1280190:intron 15.0%
!! CATTCATAAAAAATACAATT+TGG + chr8_3:18277874-18277893 None:intergenic 15.0%
!! AAACATTTCTTCAAATTATA+TGG - chr8_3:18278389-18278408 Msa1280190:intron 15.0%
!! ATATAAAATAGGAATACATA+AGG + chr8_3:18278685-18278704 None:intergenic 15.0%
!!! TTATGTATTCCTATTTTATA+TGG - chr8_3:18278684-18278703 Msa1280190:intron 15.0%
!!! AGTAATTTTGATTAAACAAA+GGG + chr8_3:18278715-18278734 None:intergenic 15.0%
!!! TAGTAATTTTGATTAAACAA+AGG + chr8_3:18278716-18278735 None:intergenic 15.0%
!! ACAACAGAAGAAAAAAAAAA+TGG + chr8_3:18273311-18273330 None:intergenic 20.0%
!!! TTTGTGTTATAGTTTGTTTA+AGG - chr8_3:18274154-18274173 Msa1280190:intron 20.0%
!!! ATTATATTTCTACGTAGAAT+GGG + chr8_3:18275242-18275261 None:intergenic 20.0%
!!! AATTATATTTCTACGTAGAA+TGG + chr8_3:18275243-18275262 None:intergenic 20.0%
!! ATATAATTATGAATCTGACT+TGG - chr8_3:18275255-18275274 Msa1280190:CDS 20.0%
!! ATTAGATATAACTTCATTTG+TGG + chr8_3:18275338-18275357 None:intergenic 20.0%
!! ACAAATGAAGTTATATCTAA+TGG - chr8_3:18275337-18275356 Msa1280190:intron 20.0%
!! GTTATATCTAATGGAATAAA+TGG - chr8_3:18275346-18275365 Msa1280190:intron 20.0%
!! ATAATTGATATTTAGCACTA+CGG + chr8_3:18275422-18275441 None:intergenic 20.0%
!! ACTAAAAAACATGAAATGTA+GGG + chr8_3:18275852-18275871 None:intergenic 20.0%
!! AACTAAAAAACATGAAATGT+AGG + chr8_3:18275853-18275872 None:intergenic 20.0%
!!! ATATGCATAAATAGTCATTT+TGG + chr8_3:18276054-18276073 None:intergenic 20.0%
!! ATTGTTGAAAACTTAAAGAT+TGG + chr8_3:18276356-18276375 None:intergenic 20.0%
!! GGTTCTATATATTAAAATAG+TGG + chr8_3:18276425-18276444 None:intergenic 20.0%
!! AATGTACTTATAAGATTACA+AGG + chr8_3:18276507-18276526 None:intergenic 20.0%
!! ATCTATATAGCATAATAGAT+TGG + chr8_3:18276573-18276592 None:intergenic 20.0%
!! TGAATTAAATAATGCTTGTA+AGG + chr8_3:18276600-18276619 None:intergenic 20.0%
!! ATGTTAGAGTAAGTTATTTA+TGG - chr8_3:18276941-18276960 Msa1280190:intron 20.0%
!! ATTTGCATGAAAAAAAGTTA+AGG - chr8_3:18277028-18277047 Msa1280190:CDS 20.0%
!! TTATGTATATATGTATGGAA+AGG + chr8_3:18277195-18277214 None:intergenic 20.0%
!! TACATAAAAACATTCAATGA+TGG - chr8_3:18277828-18277847 Msa1280190:CDS 20.0%
!! ATTTCTTCAAATTATATGGT+TGG - chr8_3:18278393-18278412 Msa1280190:intron 20.0%
!! ATATCTATCTATCTTATCTA+GGG - chr8_3:18279512-18279531 Msa1280190:five_prime_UTR 20.0%
!!! TGATGTTTTTTTTCAAACTA+GGG + chr8_3:18279596-18279615 None:intergenic 20.0%
!!! TTGATGTTTTTTTTCAAACT+AGG + chr8_3:18279597-18279616 None:intergenic 20.0%
!! TGAAAAAAAACATCAATGAA+AGG - chr8_3:18279601-18279620 Msa1280190:five_prime_UTR 20.0%
! CAAGATTTACTTGTGATTAA+GGG - chr8_3:18273477-18273496 Msa1280190:CDS 25.0%
!!! GGAAAAAGTTTTGAACTTTT+TGG - chr8_3:18273503-18273522 Msa1280190:CDS 25.0%
!!! AGTTTTGAACTTTTTGGATT+TGG - chr8_3:18273509-18273528 Msa1280190:CDS 25.0%
!!! GTTTTGAACTTTTTGGATTT+GGG - chr8_3:18273510-18273529 Msa1280190:CDS 25.0%
! AGAGAAGAAGAAAAAAAAAG+TGG - chr8_3:18273549-18273568 Msa1280190:CDS 25.0%
! GAGAAGAAGAAAAAAAAAGT+GGG - chr8_3:18273550-18273569 Msa1280190:CDS 25.0%
! AGAAGAAGAAAAAAAAAGTG+GGG - chr8_3:18273551-18273570 Msa1280190:CDS 25.0%
! TTCCATCAAACAAATCAAAA+GGG + chr8_3:18273841-18273860 None:intergenic 25.0%
! TTTCCATCAAACAAATCAAA+AGG + chr8_3:18273842-18273861 None:intergenic 25.0%
! ATGAAGCAAACAAATATTGA+TGG - chr8_3:18273864-18273883 Msa1280190:intron 25.0%
!! AAACAAGACAAGTTAAGTTT+TGG - chr8_3:18274234-18274253 Msa1280190:intron 25.0%
!! TTTTCCTTTTCATTTTCACA+TGG - chr8_3:18274310-18274329 Msa1280190:intron 25.0%
! AAAACCATGTGAAAATGAAA+AGG + chr8_3:18274317-18274336 None:intergenic 25.0%
! AATCCTATTTGTTCAAATTG+TGG - chr8_3:18274488-18274507 Msa1280190:intron 25.0%
! ATAGATGTTTGTCTATTTGA+AGG + chr8_3:18274776-18274795 None:intergenic 25.0%
! TTCAAATAGACAAACATCTA+TGG - chr8_3:18274775-18274794 Msa1280190:CDS 25.0%
! GATCACAATGTTTAAGAAAA+TGG + chr8_3:18275183-18275202 None:intergenic 25.0%
! AAATATCAATTATAGCGTAG+CGG - chr8_3:18275429-18275448 Msa1280190:intron 25.0%
!!! CTTGTTATTAGTGTGTTTTA+TGG - chr8_3:18275816-18275835 Msa1280190:intron 25.0%
! TTAACGAAAAACACAATGTA+TGG + chr8_3:18275979-18275998 None:intergenic 25.0%
!! GTGTTTTTCGTTAATTAGTT+TGG - chr8_3:18275985-18276004 Msa1280190:intron 25.0%
! ACCATTGTTTAAGTAATATG+TGG - chr8_3:18276078-18276097 Msa1280190:intron 25.0%
! TCCACATATTACTTAAACAA+TGG + chr8_3:18276082-18276101 None:intergenic 25.0%
!! CAATACAATTCTTTGAAAAG+TGG + chr8_3:18276295-18276314 None:intergenic 25.0%
!!! AGTGGATTAATCTATACTTT+AGG + chr8_3:18276407-18276426 None:intergenic 25.0%
! TCTAGTCAATAAGTTTCAAA+AGG + chr8_3:18276471-18276490 None:intergenic 25.0%
!!! AGCAAGATTTTTAGAAACAA+TGG + chr8_3:18276749-18276768 None:intergenic 25.0%
!! AGTACCCTATTTTATGTAAA+TGG - chr8_3:18276782-18276801 Msa1280190:intron 25.0%
! TGGACCATTTACATAAAATA+GGG + chr8_3:18276789-18276808 None:intergenic 25.0%
! ATGGACCATTTACATAAAAT+AGG + chr8_3:18276790-18276809 None:intergenic 25.0%
! ATTATATGATGAGAGATGAT+TGG + chr8_3:18276844-18276863 None:intergenic 25.0%
!!! TTACTAGTACAGTAGTTTTT+TGG - chr8_3:18276874-18276893 Msa1280190:intron 25.0%
! GTAAGTGTTATGTAACTATT+TGG - chr8_3:18277101-18277120 Msa1280190:CDS 25.0%
!! AGAGATTTTATATGTAGCAA+AGG + chr8_3:18277697-18277716 None:intergenic 25.0%
!!! GATTTATTTTATGATACGTG+AGG + chr8_3:18277768-18277787 None:intergenic 25.0%
!!! ATTTTGATTAAACAAAGGGT+GGG + chr8_3:18278711-18278730 None:intergenic 25.0%
!!! AATTTTGATTAAACAAAGGG+TGG + chr8_3:18278712-18278731 None:intergenic 25.0%
!!! TGTTTTTGTTGTTGTTGTTT+TGG - chr8_3:18279378-18279397 Msa1280190:five_prime_UTR 25.0%
! GAAAAGGGTAAAAATGTAAT+TGG - chr8_3:18279413-18279432 Msa1280190:five_prime_UTR 25.0%
! GATATCTATCTATCTTATCT+AGG - chr8_3:18279511-18279530 Msa1280190:five_prime_UTR 25.0%
!!! GATGTTTTTTTTCAAACTAG+GGG + chr8_3:18279595-18279614 None:intergenic 25.0%
AACACTGAGAAAAACTTGAA+AGG + chr8_3:18273172-18273191 None:intergenic 30.0%
GAGAGAAAGAAAGAGAAAAA+AGG + chr8_3:18273264-18273283 None:intergenic 30.0%
CCTTAATCACAAGTAAATCT+TGG + chr8_3:18273479-18273498 None:intergenic 30.0%
CCAAGATTTACTTGTGATTA+AGG - chr8_3:18273476-18273495 Msa1280190:CDS 30.0%
TTTACTTGTGATTAAGGGTT+TGG - chr8_3:18273482-18273501 Msa1280190:CDS 30.0%
AAAGATTGGAGCTTAGTAAA+AGG - chr8_3:18274201-18274220 Msa1280190:intron 30.0%
! TCATTTGTGTTCTTCGATTT+TGG + chr8_3:18274262-18274281 None:intergenic 30.0%
AAATCGAAGAACACAAATGA+AGG - chr8_3:18274262-18274281 Msa1280190:intron 30.0%
CAAAAAGTTAGCAACACAAA+AGG + chr8_3:18274360-18274379 None:intergenic 30.0%
AGCTGAGAATATGTCTATAA+GGG - chr8_3:18274454-18274473 Msa1280190:intron 30.0%
CTAAAATCAGGTAATGATGA+AGG + chr8_3:18274716-18274735 None:intergenic 30.0%
!!! TCATTACCTGATTTTAGTTC+AGG - chr8_3:18274719-18274738 Msa1280190:CDS 30.0%
! TATGTTTCTTGAACTTGCTT+TGG - chr8_3:18274832-18274851 Msa1280190:CDS 30.0%
! GATTGCATCGATAACATTAA+GGG + chr8_3:18275089-18275108 None:intergenic 30.0%
! AGATTGCATCGATAACATTA+AGG + chr8_3:18275090-18275109 None:intergenic 30.0%
TTTGATGTCATGTTTCAGAT+TGG - chr8_3:18275138-18275157 Msa1280190:CDS 30.0%
! TTTTCTTTCAACAGAATCGA+TGG - chr8_3:18275278-18275297 Msa1280190:CDS 30.0%
AGATATAACTTCATTTGTGG+AGG + chr8_3:18275335-18275354 None:intergenic 30.0%
GGAATAAATGGAAGAAGAAA+TGG - chr8_3:18275358-18275377 Msa1280190:intron 30.0%
!! ATGAATTAGCTCTAGCAAAA+CGG - chr8_3:18275506-18275525 Msa1280190:intron 30.0%
! TAGCAAAACGGATGTATTTT+CGG - chr8_3:18275518-18275537 Msa1280190:intron 30.0%
ACTAATTGAATAAGCATTCG+AGG + chr8_3:18276012-18276031 None:intergenic 30.0%
AGTAATATGTGGATCAAAAG+AGG - chr8_3:18276089-18276108 Msa1280190:intron 30.0%
TTTAAATAATACTCCCCATG+TGG - chr8_3:18276381-18276400 Msa1280190:intron 30.0%
CAGAAATTCAAGTGATAAGA+GGG + chr8_3:18276446-18276465 None:intergenic 30.0%
ACAGAAATTCAAGTGATAAG+AGG + chr8_3:18276447-18276466 None:intergenic 30.0%
TTTGGATTTAGCATAGTTCA+AGG - chr8_3:18276625-18276644 Msa1280190:intron 30.0%
! TGATTTGTAAGTACGACTTA+AGG - chr8_3:18277393-18277412 Msa1280190:intron 30.0%
GATTTGTAAGTACGACTTAA+GGG - chr8_3:18277394-18277413 Msa1280190:intron 30.0%
! ATGTGGATTGAATACAAAGT+TGG - chr8_3:18277418-18277437 Msa1280190:CDS 30.0%
GAATACAAAGTTGGAAAAGT+TGG - chr8_3:18277427-18277446 Msa1280190:CDS 30.0%
! TATTGCATTGATGAATTTGC+AGG - chr8_3:18277468-18277487 Msa1280190:CDS 30.0%
!! TTATATGTAGCAAAGGTGTT+AGG + chr8_3:18277690-18277709 None:intergenic 30.0%
GTAAAATGTGCTAGAGAAAT+TGG + chr8_3:18277811-18277830 None:intergenic 30.0%
AGAAAATCAAACAGTCTTTG+AGG + chr8_3:18278129-18278148 None:intergenic 30.0%
GAATGGGATATACTATCAAA+TGG - chr8_3:18278171-18278190 Msa1280190:CDS 30.0%
AAAGAAAACTTACACTAGCA+CGG + chr8_3:18278263-18278282 None:intergenic 30.0%
AGAAAAAGTGGTAGTATCTT+TGG - chr8_3:18278792-18278811 Msa1280190:CDS 30.0%
!!! TGTTGTTGTTGTTTTGGTAA+TGG - chr8_3:18279384-18279403 Msa1280190:five_prime_UTR 30.0%
!! TTGGTAATGGATGAAAGAAA+AGG - chr8_3:18279397-18279416 Msa1280190:five_prime_UTR 30.0%
!! TGGTAATGGATGAAAGAAAA+GGG - chr8_3:18279398-18279417 Msa1280190:five_prime_UTR 30.0%
AAGGGTAAAAATGTAATTGG+TGG - chr8_3:18279416-18279435 Msa1280190:five_prime_UTR 30.0%
AGGGTAAAAATGTAATTGGT+GGG - chr8_3:18279417-18279436 Msa1280190:five_prime_UTR 30.0%
AAAATGTAATTGGTGGGATT+TGG - chr8_3:18279423-18279442 Msa1280190:five_prime_UTR 30.0%
AAATGTAATTGGTGGGATTT+GGG - chr8_3:18279424-18279443 Msa1280190:five_prime_UTR 30.0%
! TATCTATCTTATCTAGGGTT+AGG - chr8_3:18279517-18279536 Msa1280190:five_prime_UTR 30.0%
AACATCAATGAAAGGAATAG+TGG - chr8_3:18279609-18279628 Msa1280190:five_prime_UTR 30.0%
CTGAGAAAAACTTGAAAGGT+GGG + chr8_3:18273168-18273187 None:intergenic 35.0%
ACTGAGAAAAACTTGAAAGG+TGG + chr8_3:18273169-18273188 None:intergenic 35.0%
! TACACTGTTTCTCTCTCAAA+AGG - chr8_3:18273191-18273210 Msa1280190:three_prime_UTR 35.0%
! ACACTGTTTCTCTCTCAAAA+GGG - chr8_3:18273192-18273211 Msa1280190:three_prime_UTR 35.0%
AGAGAGATTATGGAGACAAA+GGG + chr8_3:18273377-18273396 None:intergenic 35.0%
GAACAAAGACAGAGAGATTA+TGG + chr8_3:18273387-18273406 None:intergenic 35.0%
! TTGAACTTTTTGGATTTGGG+TGG - chr8_3:18273513-18273532 Msa1280190:CDS 35.0%
!! TGGGGTATTTGATGAGTTTT+GGG - chr8_3:18273569-18273588 Msa1280190:CDS 35.0%
TTTGTAGAGAACAATTCAGG+AGG - chr8_3:18273595-18273614 Msa1280190:CDS 35.0%
!! AACATTGATTTAGCCAAAGC+TGG + chr8_3:18273712-18273731 None:intergenic 35.0%
AAATCAATGTTCAACTCACC+TGG - chr8_3:18273721-18273740 Msa1280190:CDS 35.0%
!!! GACCCTTTTGATTTGTTTGA+TGG - chr8_3:18273836-18273855 Msa1280190:CDS 35.0%
ATGTGAATGGATCAATGCAT+GGG - chr8_3:18273895-18273914 Msa1280190:intron 35.0%
CATGGGAATTATGAGCAAAA+TGG - chr8_3:18273912-18273931 Msa1280190:intron 35.0%
TTTGAGAAGAAGTAGAGAAG+AGG - chr8_3:18273935-18273954 Msa1280190:intron 35.0%
! TAGATCTGGTAGTGATAACT+TGG - chr8_3:18273965-18273984 Msa1280190:intron 35.0%
AACAGATTCAAGAGCTTGAA+AGG - chr8_3:18274063-18274082 Msa1280190:intron 35.0%
! CCAATCTTTGTTTCTCATCT+GGG + chr8_3:18274190-18274209 None:intergenic 35.0%
! TCCAATCTTTGTTTCTCATC+TGG + chr8_3:18274191-18274210 None:intergenic 35.0%
!! GCTTAGTAAAAGGCTTTGTT+TGG - chr8_3:18274211-18274230 Msa1280190:intron 35.0%
ACAATTGTACTAGACTCAAC+TGG - chr8_3:18274385-18274404 Msa1280190:intron 35.0%
GAGCTGAGAATATGTCTATA+AGG - chr8_3:18274453-18274472 Msa1280190:intron 35.0%
CCACCACAATTTGAACAAAT+AGG + chr8_3:18274494-18274513 None:intergenic 35.0%
CCTATTTGTTCAAATTGTGG+TGG - chr8_3:18274491-18274510 Msa1280190:intron 35.0%
!! GCACTTGCTGGAAAATTTTT+AGG - chr8_3:18274602-18274621 Msa1280190:CDS 35.0%
GTTGGAGGAAACAACAATAA+TGG - chr8_3:18274668-18274687 Msa1280190:CDS 35.0%
GACATTCCTGAACTAAAATC+AGG + chr8_3:18274728-18274747 None:intergenic 35.0%
TCTATTTGAAGGAGACACAA+TGG + chr8_3:18274765-18274784 None:intergenic 35.0%
!! TATGGATGAGTTGGTTAAGA+TGG - chr8_3:18274859-18274878 Msa1280190:CDS 35.0%
CTATACTCCTAATCCAAAGA+GGG + chr8_3:18274898-18274917 None:intergenic 35.0%
TCTATACTCCTAATCCAAAG+AGG + chr8_3:18274899-18274918 None:intergenic 35.0%
! CTTTGGATTAGGAGTATAGA+AGG - chr8_3:18274899-18274918 Msa1280190:intron 35.0%
! AAGGGAAATTTTGAACCATG+AGG - chr8_3:18274925-18274944 Msa1280190:intron 35.0%
TGAACCATGAGGAATATTTG+AGG - chr8_3:18274936-18274955 Msa1280190:intron 35.0%
ATGTCCTCAAATATTCCTCA+TGG + chr8_3:18274943-18274962 None:intergenic 35.0%
TTAGGTTTCAAACCTATGCA+AGG + chr8_3:18274971-18274990 None:intergenic 35.0%
! TGCATAGGTTTGAAACCTAA+TGG - chr8_3:18274971-18274990 Msa1280190:intron 35.0%
!!! ACCTAATGGTTTTGTTTCTG+AGG - chr8_3:18274985-18275004 Msa1280190:intron 35.0%
TACTGTCATCATCAATAGCT+TGG - chr8_3:18275024-18275043 Msa1280190:intron 35.0%
TATCGATGCAATCTCAATTG+TGG - chr8_3:18275096-18275115 Msa1280190:intron 35.0%
!! CTACAAGTTTTGTGAACTGT+AGG - chr8_3:18275711-18275730 Msa1280190:intron 35.0%
ATTACCTTGGAGTAACCATT+TGG + chr8_3:18275770-18275789 None:intergenic 35.0%
TTAGTTTCCACATCTTCTTG+TGG - chr8_3:18275867-18275886 Msa1280190:intron 35.0%
GAAGTTCAGAACACAATGTA+TGG + chr8_3:18275917-18275936 None:intergenic 35.0%
TTAGTCAGATCACACATTTG+CGG - chr8_3:18276027-18276046 Msa1280190:intron 35.0%
ATCTATACTTTAGGCCACAT+GGG + chr8_3:18276398-18276417 None:intergenic 35.0%
AATCTATACTTTAGGCCACA+TGG + chr8_3:18276399-18276418 None:intergenic 35.0%
TTGAGATTTGCAAATCTCAC+AGG + chr8_3:18276714-18276733 None:intergenic 35.0%
ATACCTCTTGTCCTTTCTAT+TGG - chr8_3:18276813-18276832 Msa1280190:intron 35.0%
TACCTCTTGTCCTTTCTATT+GGG - chr8_3:18276814-18276833 Msa1280190:intron 35.0%
AAAAGTTGGCATGACAAACA+TGG - chr8_3:18277441-18277460 Msa1280190:CDS 35.0%
TTAACAAAGGTCTATACAGC+TGG + chr8_3:18277537-18277556 None:intergenic 35.0%
TATAGACCTTTGTTAAGCTC+AGG - chr8_3:18277541-18277560 Msa1280190:intron 35.0%
! GGTTAAGTTTGTTCCATTTG+TGG + chr8_3:18277993-18278012 None:intergenic 35.0%
AAATGGAACAAACTTAACCC+TGG - chr8_3:18277994-18278013 Msa1280190:CDS 35.0%
TAATGTAGACGAAGATGTGA+GGG - chr8_3:18278017-18278036 Msa1280190:CDS 35.0%
ATAGTATATCCCATTCGCTA+CGG + chr8_3:18278167-18278186 None:intergenic 35.0%
TGGGATATACTATCAAATGG+TGG - chr8_3:18278174-18278193 Msa1280190:CDS 35.0%
ATTGCTAAAGGACAAGATCA+TGG - chr8_3:18278219-18278238 Msa1280190:CDS 35.0%
GTGACAACGTTATAACTATG+TGG - chr8_3:18278462-18278481 Msa1280190:intron 35.0%
TCAACGTTGAAATGTGAATG+TGG - chr8_3:18278514-18278533 Msa1280190:CDS 35.0%
! ATGTGGCTTTCTTTGTTTGT+CGG - chr8_3:18278531-18278550 Msa1280190:CDS 35.0%
AAAAGTTGAGAAGGACAAGA+AGG - chr8_3:18278578-18278597 Msa1280190:CDS 35.0%
GACAAGAAGGAAATTTCTGA+AGG - chr8_3:18278591-18278610 Msa1280190:CDS 35.0%
TTGAAACGCCACAGTTAAAA+GGG + chr8_3:18279184-18279203 None:intergenic 35.0%
! TTTGAAACGCCACAGTTAAA+AGG + chr8_3:18279185-18279204 None:intergenic 35.0%
AATGTAATTGGTGGGATTTG+GGG - chr8_3:18279425-18279444 Msa1280190:five_prime_UTR 35.0%
! CCTTTTTCTTTTTCCATGAG+TGG + chr8_3:18279472-18279491 None:intergenic 35.0%
CCACTCATGGAAAAAGAAAA+AGG - chr8_3:18279469-18279488 Msa1280190:five_prime_UTR 35.0%
AAAGAAAAAGGTTCCTTGCA+TGG - chr8_3:18279481-18279500 Msa1280190:five_prime_UTR 35.0%
!!! CAGAGAGAGTTTTGAGACAT+TGG - chr8_3:18273337-18273356 Msa1280190:three_prime_UTR 40.0%
CAGAGAGATTATGGAGACAA+AGG + chr8_3:18273378-18273397 None:intergenic 40.0%
!! GTGGGGTATTTGATGAGTTT+TGG - chr8_3:18273568-18273587 Msa1280190:CDS 40.0%
!! GGGGTATTTGATGAGTTTTG+GGG - chr8_3:18273570-18273589 Msa1280190:CDS 40.0%
!! GGGTATTTGATGAGTTTTGG+GGG - chr8_3:18273571-18273590 Msa1280190:CDS 40.0%
!!! GGTATTTGATGAGTTTTGGG+GGG - chr8_3:18273572-18273591 Msa1280190:CDS 40.0%
GGGTTTGTAGAGAACAATTC+AGG - chr8_3:18273592-18273611 Msa1280190:CDS 40.0%
AACAACGAAAGAATGCCGTT+TGG - chr8_3:18273655-18273674 Msa1280190:CDS 40.0%
GGTTGAGAGAAAGAACCAAA+CGG + chr8_3:18273673-18273692 None:intergenic 40.0%
! TCTTGTTACTTCTCCAGCTT+TGG - chr8_3:18273696-18273715 Msa1280190:CDS 40.0%
ACAAGTGCAAGTGATAATCC+AGG + chr8_3:18273742-18273761 None:intergenic 40.0%
GATGGACAAGAAGATGTGAA+TGG - chr8_3:18273882-18273901 Msa1280190:intron 40.0%
GATGTGAATGGATCAATGCA+TGG - chr8_3:18273894-18273913 Msa1280190:intron 40.0%
GAAGAGGAACAAAGTAGATC+TGG - chr8_3:18273951-18273970 Msa1280190:intron 40.0%
! TCTGGTAGTGATAACTTGGA+TGG - chr8_3:18273969-18273988 Msa1280190:intron 40.0%
GATAACTTGGATGGTGTTTC+TGG - chr8_3:18273978-18273997 Msa1280190:intron 40.0%
TGATATCTCTTCTTCCTAGG+AGG + chr8_3:18274029-18274048 None:intergenic 40.0%
TCAAGCTCTTGAATCTGTTG+AGG + chr8_3:18274062-18274081 None:intergenic 40.0%
CCCAGATGAGAAACAAAGAT+TGG - chr8_3:18274187-18274206 Msa1280190:intron 40.0%
TGTACTAGACTCAACTGGAA+AGG - chr8_3:18274390-18274409 Msa1280190:intron 40.0%
! GGCATGAGAACAATTTGCTT+AGG - chr8_3:18274411-18274430 Msa1280190:intron 40.0%
TGTCTATAAGGGATGCAATG+AGG - chr8_3:18274465-18274484 Msa1280190:intron 40.0%
!! CCAAGCTCTAAACTTGAGTT+GGG + chr8_3:18274647-18274666 None:intergenic 40.0%
!! ACCAAGCTCTAAACTTGAGT+TGG + chr8_3:18274648-18274667 None:intergenic 40.0%
!! TCAAGTTTAGAGCTTGGTGT+TGG - chr8_3:18274650-18274669 Msa1280190:CDS 40.0%
AAGGAGACACAATGGCTAAA+GGG + chr8_3:18274757-18274776 None:intergenic 40.0%
CAAACATCTATGGTGACTAC+TGG - chr8_3:18274785-18274804 Msa1280190:CDS 40.0%
!! GACTACTGGCTTTGATAGAT+CGG - chr8_3:18274799-18274818 Msa1280190:CDS 40.0%
CACAAACTAATGACCCTCTT+TGG - chr8_3:18274882-18274901 Msa1280190:intron 40.0%
CTAATGACCCTCTTTGGATT+AGG - chr8_3:18274888-18274907 Msa1280190:intron 40.0%
! TGGATTAGGAGTATAGAAGG+AGG - chr8_3:18274902-18274921 Msa1280190:intron 40.0%
! TTAGGAGTATAGAAGGAGGA+AGG - chr8_3:18274906-18274925 Msa1280190:intron 40.0%
! TAGGAGTATAGAAGGAGGAA+GGG - chr8_3:18274907-18274926 Msa1280190:intron 40.0%
GCCTCAGAAACAAAACCATT+AGG + chr8_3:18274989-18275008 None:intergenic 40.0%
!!! TTTTGTTTCTGAGGCCTCAA+GGG - chr8_3:18274994-18275013 Msa1280190:intron 40.0%
GAGGTTCTTGCAATGATACA+AGG + chr8_3:18275316-18275335 None:intergenic 40.0%
AATGCCAGTGTTGTCAATCA+TGG + chr8_3:18275484-18275503 None:intergenic 40.0%
TTCGCGAGGTAAATTTCCTT+AGG - chr8_3:18275612-18275631 Msa1280190:intron 40.0%
! CATGTTGCTTGCAAAACCTA+AGG + chr8_3:18275631-18275650 None:intergenic 40.0%
! TTTTGCAAGCAACATGCAGA+AGG - chr8_3:18275635-18275654 Msa1280190:intron 40.0%
TTTGCAAGCAACATGCAGAA+GGG - chr8_3:18275636-18275655 Msa1280190:intron 40.0%
GATACCATCAGAGAAACTTC+TGG - chr8_3:18275686-18275705 Msa1280190:intron 40.0%
GTTGTGCAAGATATGCCAAA+TGG - chr8_3:18275752-18275771 Msa1280190:intron 40.0%
TATGCCAAATGGTTACTCCA+AGG - chr8_3:18275763-18275782 Msa1280190:intron 40.0%
TTACTGTCCACAAGAAGATG+TGG + chr8_3:18275877-18275896 None:intergenic 40.0%
GTTCAGAACACAATGTATGG+AGG + chr8_3:18275914-18275933 None:intergenic 40.0%
GTGAAGTGAAGCAAAACACA+AGG - chr8_3:18276128-18276147 Msa1280190:intron 40.0%
TGAAGCAAAACACAAGGTCA+AGG - chr8_3:18276134-18276153 Msa1280190:intron 40.0%
AACACAAGGTCAAGGAATCA+AGG - chr8_3:18276142-18276161 Msa1280190:intron 40.0%
ACACAAGGTCAAGGAATCAA+GGG - chr8_3:18276143-18276162 Msa1280190:intron 40.0%
GAATTGTATTGCACCTGAGA+AGG - chr8_3:18276304-18276323 Msa1280190:intron 40.0%
!! TTATGAGAAGCATCCTTCTC+AGG + chr8_3:18276320-18276339 None:intergenic 40.0%
TCTATACTTTAGGCCACATG+GGG + chr8_3:18276397-18276416 None:intergenic 40.0%
!! AAAGGACAAGAGGTATCTCA+TGG + chr8_3:18276809-18276828 None:intergenic 40.0%
ATCCCAATAGAAAGGACAAG+AGG + chr8_3:18276819-18276838 None:intergenic 40.0%
! GATTGGTCATCCCAATAGAA+AGG + chr8_3:18276827-18276846 None:intergenic 40.0%
GGTGGAACATACAGAATATG+AGG - chr8_3:18277498-18277517 Msa1280190:intron 40.0%
CAGAGGACATTAATATGGCA+AGG + chr8_3:18277621-18277640 None:intergenic 40.0%
! GATTTAGAGTCATACCAGAG+TGG + chr8_3:18277660-18277679 None:intergenic 40.0%
ATGACAAACAACTTCTGTGC+AGG - chr8_3:18277949-18277968 Msa1280190:CDS 40.0%
TGACAAACAACTTCTGTGCA+GGG - chr8_3:18277950-18277969 Msa1280190:CDS 40.0%
CATCTTCGTCTACATTACCA+GGG + chr8_3:18278014-18278033 None:intergenic 40.0%
ACATCTTCGTCTACATTACC+AGG + chr8_3:18278015-18278034 None:intergenic 40.0%
GTAATGTAGACGAAGATGTG+AGG - chr8_3:18278016-18278035 Msa1280190:CDS 40.0%
! TTGATTTTCTGCGTGACGAA+AGG - chr8_3:18278139-18278158 Msa1280190:CDS 40.0%
ATATGAGCCATCTCTTGCAT+AGG + chr8_3:18278201-18278220 None:intergenic 40.0%
GAGATGGCTCATATTGCTAA+AGG - chr8_3:18278207-18278226 Msa1280190:CDS 40.0%
! CTTTGTTTGTCGGTAGTGTT+TGG - chr8_3:18278541-18278560 Msa1280190:CDS 40.0%
! GGTAGTGTTTGGATTTTGAG+AGG - chr8_3:18278552-18278571 Msa1280190:CDS 40.0%
GAGAGGTTGAAAAGTTGAGA+AGG - chr8_3:18278569-18278588 Msa1280190:CDS 40.0%
AGGGTGGGACCATATAAAAT+AGG + chr8_3:18278696-18278715 None:intergenic 40.0%
TATCAACATGCTACTCTGGT+TGG + chr8_3:18278947-18278966 None:intergenic 40.0%
GTAGTATCAACATGCTACTC+TGG + chr8_3:18278951-18278970 None:intergenic 40.0%
ACAAGAAACATGCATAGACG+AGG - chr8_3:18278969-18278988 Msa1280190:intron 40.0%
TTCATGACAACATGCATAGC+TGG + chr8_3:18279030-18279049 None:intergenic 40.0%
GCTATGCATGTTGTCATGAA+CGG - chr8_3:18279030-18279049 Msa1280190:intron 40.0%
CTGTTGGAAGACTATTCACA+AGG + chr8_3:18279209-18279228 None:intergenic 40.0%
GTAGAGAACAATTCAGGAGG+TGG - chr8_3:18273598-18273617 Msa1280190:CDS 45.0%
! GGTGGAGGTGTAAGAAACAT+AGG - chr8_3:18273619-18273638 Msa1280190:CDS 45.0%
CGGTGATATCTCTTCTTCCT+AGG + chr8_3:18274032-18274051 None:intergenic 45.0%
! GAATCTGTTGAGGAGTGTGT+CGG + chr8_3:18274052-18274071 None:intergenic 45.0%
! CTTTGTTTCTCATCTGGGTG+AGG + chr8_3:18274185-18274204 None:intergenic 45.0%
AATCGAGAATGCGAGGTTGA+AGG - chr8_3:18274559-18274578 Msa1280190:CDS 45.0%
GATAGAGTTTGTGCACTTGC+TGG - chr8_3:18274590-18274609 Msa1280190:CDS 45.0%
GAGTTGGGTAGCGAAGAAAT+CGG + chr8_3:18274632-18274651 None:intergenic 45.0%
! CCCAACTCAAGTTTAGAGCT+TGG - chr8_3:18274644-18274663 Msa1280190:CDS 45.0%
!! AGTTTAGAGCTTGGTGTTGG+AGG - chr8_3:18274653-18274672 Msa1280190:CDS 45.0%
GAAGGAGACACAATGGCTAA+AGG + chr8_3:18274758-18274777 None:intergenic 45.0%
GCTTTGATAGATCGGTCGAA+AGG - chr8_3:18274807-18274826 Msa1280190:CDS 45.0%
! TGAACTTGCTTTGGCTGCTA+TGG - chr8_3:18274841-18274860 Msa1280190:CDS 45.0%
TTTGGCTGCTATGGATGAGT+TGG - chr8_3:18274850-18274869 Msa1280190:CDS 45.0%
AGGACATTCACTCCTTGCAT+AGG - chr8_3:18274956-18274975 Msa1280190:intron 45.0%
!!! GTTTTGTTTCTGAGGCCTCA+AGG - chr8_3:18274993-18275012 Msa1280190:intron 45.0%
CGATCCATGATTGACAACAC+TGG - chr8_3:18275477-18275496 Msa1280190:intron 45.0%
ACTTCATGTGCTATCGCCTT+TGG - chr8_3:18275583-18275602 Msa1280190:intron 45.0%
AGGAAATTTACCTCGCGAAC+CGG + chr8_3:18275611-18275630 None:intergenic 45.0%
TTGCAAGCAACATGCAGAAG+GGG - chr8_3:18275637-18275656 Msa1280190:intron 45.0%
AGCACCAGAAGTTTCTCTGA+TGG + chr8_3:18275693-18275712 None:intergenic 45.0%
TCTTGCACAACACAACCAGA+GGG + chr8_3:18275743-18275762 None:intergenic 45.0%
ATCTTGCACAACACAACCAG+AGG + chr8_3:18275744-18275763 None:intergenic 45.0%
CACAAGGTCAAGGAATCAAG+GGG - chr8_3:18276144-18276163 Msa1280190:intron 45.0%
GGGTCAAACATACAAGAGAC+TGG - chr8_3:18276673-18276692 Msa1280190:intron 45.0%
! AAGTACGACTTAAGGGCATG+TGG - chr8_3:18277401-18277420 Msa1280190:intron 45.0%
TGATGAATTTGCAGGTGACG+TGG - chr8_3:18277476-18277495 Msa1280190:CDS 45.0%
GATGAATTTGCAGGTGACGT+GGG - chr8_3:18277477-18277496 Msa1280190:CDS 45.0%
ACAAAGGTCTATACAGCTGG+TGG + chr8_3:18277534-18277553 None:intergenic 45.0%
ACCTTTGTTAAGCTCAGGCA+TGG - chr8_3:18277546-18277565 Msa1280190:intron 45.0%
CCTTTGTTAAGCTCAGGCAT+GGG - chr8_3:18277547-18277566 Msa1280190:intron 45.0%
! TTAAGCTCAGGCATGGGTTT+TGG - chr8_3:18277553-18277572 Msa1280190:intron 45.0%
AGCGGCAGAGGACATTAATA+TGG + chr8_3:18277626-18277645 None:intergenic 45.0%
TGTCTCACAGCAATAACAGC+AGG - chr8_3:18277892-18277911 Msa1280190:CDS 45.0%
GACAAACAACTTCTGTGCAG+GGG - chr8_3:18277951-18277970 Msa1280190:CDS 45.0%
!! AACAGTCTTTGAGGCGAAAC+CGG + chr8_3:18278120-18278139 None:intergenic 45.0%
AGAAACATGCATAGACGAGG+CGG - chr8_3:18278972-18278991 Msa1280190:intron 45.0%
TGCATAGCTGGAATATCGAC+CGG + chr8_3:18279018-18279037 None:intergenic 45.0%
ATGCATGTTGTCATGAACGG+TGG - chr8_3:18279033-18279052 Msa1280190:intron 45.0%
TACGTGGCATTACTACCATC+CGG - chr8_3:18279066-18279085 Msa1280190:CDS 45.0%
TTAAAAGGGACCCGCTAACA+CGG + chr8_3:18279170-18279189 None:intergenic 45.0%
TCCAACAGCAAAACTCACAG+TGG - chr8_3:18279221-18279240 Msa1280190:five_prime_UTR 45.0%
!! TCCACTGTGAGTTTTGCTGT+TGG + chr8_3:18279225-18279244 None:intergenic 45.0%
AAGCTGAGTCGTGACATAAG+TGG - chr8_3:18279314-18279333 Msa1280190:five_prime_UTR 45.0%
AGTCAAGAACGAACCACTCA+TGG - chr8_3:18279456-18279475 Msa1280190:five_prime_UTR 45.0%
GAAAAAGGTTCCTTGCATGG+TGG - chr8_3:18279484-18279503 Msa1280190:five_prime_UTR 45.0%
GATATCCTTACCACCATGCA+AGG + chr8_3:18279497-18279516 None:intergenic 45.0%
GGGTTAGGTTCCTTAACACA+AGG - chr8_3:18279532-18279551 Msa1280190:five_prime_UTR 45.0%
AGGTTCCTTAACACAAGGCA+AGG - chr8_3:18279537-18279556 Msa1280190:five_prime_UTR 45.0%
ACGATCCTTGCCTTGTGTTA+AGG + chr8_3:18279545-18279564 None:intergenic 45.0%
TTAACACAAGGCAAGGATCG+TGG - chr8_3:18279544-18279563 Msa1280190:five_prime_UTR 45.0%
GAGAACAATTCAGGAGGTGG+TGG - chr8_3:18273601-18273620 Msa1280190:CDS 50.0%
! AACAATTCAGGAGGTGGTGG+AGG - chr8_3:18273604-18273623 Msa1280190:CDS 50.0%
GCTGGAGAAGTAACAAGACG+AGG + chr8_3:18273694-18273713 None:intergenic 50.0%
ATGCTGATGACAAGCCTCCT+AGG - chr8_3:18274012-18274031 Msa1280190:intron 50.0%
TGTGGTGGTCCAGCTATGAT+CGG - chr8_3:18274506-18274525 Msa1280190:intron 50.0%
GAAATCTCGCCGATCATAGC+TGG + chr8_3:18274518-18274537 None:intergenic 50.0%
ACCTTCGAATCGAGAATGCG+AGG - chr8_3:18274552-18274571 Msa1280190:CDS 50.0%
! ACCTCGCATTCTCGATTCGA+AGG + chr8_3:18274556-18274575 None:intergenic 50.0%
TGGGTAGCGAAGAAATCGGA+CGG + chr8_3:18274628-18274647 None:intergenic 50.0%
GACAGTACCAGTTTCCCTTG+AGG + chr8_3:18275011-18275030 None:intergenic 50.0%
GTCCATAAGAGTCTCGACGA+GGG + chr8_3:18275050-18275069 None:intergenic 50.0%
AGTCCATAAGAGTCTCGACG+AGG + chr8_3:18275051-18275070 None:intergenic 50.0%
CGTCGAGACTCTTATGGACT+CGG - chr8_3:18275051-18275070 Msa1280190:intron 50.0%
! TGTGCTATCGCCTTTGGTTC+CGG - chr8_3:18275589-18275608 Msa1280190:intron 50.0%
AGCAACATGCAGAAGGGGTT+TGG - chr8_3:18275642-18275661 Msa1280190:intron 50.0%
GCAACATGCAGAAGGGGTTT+GGG - chr8_3:18275643-18275662 Msa1280190:intron 50.0%
AACTGTAGGAAGCTTCCCTC+TGG - chr8_3:18275725-18275744 Msa1280190:intron 50.0%
CCCATGCCTGAGCTTAACAA+AGG + chr8_3:18277550-18277569 None:intergenic 50.0%
ATACCAGAGTGGTCTCGAGA+GGG + chr8_3:18277649-18277668 None:intergenic 50.0%
CTCACAGCAATAACAGCAGG+AGG - chr8_3:18277895-18277914 Msa1280190:CDS 50.0%
CAGCAATAACAGCAGGAGGA+AGG - chr8_3:18277899-18277918 Msa1280190:CDS 50.0%
!! CGAAAGAGTGTCGATGATCC+AGG - chr8_3:18278048-18278067 Msa1280190:CDS 50.0%
!! ACAGTCTTTGAGGCGAAACC+GGG + chr8_3:18278119-18278138 None:intergenic 50.0%
TGGTGGTCCTATGCAAGAGA+TGG - chr8_3:18278191-18278210 Msa1280190:CDS 50.0%
GAAACATGCATAGACGAGGC+GGG - chr8_3:18278973-18278992 Msa1280190:intron 50.0%
AAACATGCATAGACGAGGCG+GGG - chr8_3:18278974-18278993 Msa1280190:intron 50.0%
AATGGCGATGCAACCGCAAA+TGG - chr8_3:18279132-18279151 Msa1280190:CDS 50.0%
TAAAAGGGACCCGCTAACAC+GGG + chr8_3:18279169-18279188 None:intergenic 50.0%
!! TAGCGGGTCCCTTTTAACTG+TGG - chr8_3:18279173-18279192 Msa1280190:CDS 50.0%
AGGTTCCTTGCATGGTGGTA+AGG - chr8_3:18279489-18279508 Msa1280190:five_prime_UTR 50.0%
ACAAGGCAAGGATCGTGGTT+CGG - chr8_3:18279549-18279568 Msa1280190:five_prime_UTR 50.0%
GATCGGCGAGATTTCACTCG+AGG - chr8_3:18274523-18274542 Msa1280190:intron 55.0%
! TCTGAGGCCTCAAGGGAAAC+TGG - chr8_3:18275001-18275020 Msa1280190:intron 55.0%
GAATTTGCAGGTGACGTGGG+TGG - chr8_3:18277480-18277499 Msa1280190:CDS 55.0%
! ATATGGCAAGGCACTCGCAC+TGG + chr8_3:18277609-18277628 None:intergenic 55.0%
CATACCAGAGTGGTCTCGAG+AGG + chr8_3:18277650-18277669 None:intergenic 55.0%
GTTCCATTTGTGGACCGTCG+AGG + chr8_3:18277983-18278002 None:intergenic 55.0%
ACGAAAGGCTCCGTAGCGAA+TGG - chr8_3:18278154-18278173 Msa1280190:CDS 55.0%
CGAAAGGCTCCGTAGCGAAT+GGG - chr8_3:18278155-18278174 Msa1280190:CDS 55.0%
!! GTCGCTTGTTGTCTATGCGC+CGG - chr8_3:18278996-18279015 Msa1280190:intron 55.0%
TTCTCTAGTCCACGTGACCC+AGG + chr8_3:18279114-18279133 None:intergenic 55.0%
!! GGGTCACGTGGACTAGAGAA+TGG - chr8_3:18279114-18279133 Msa1280190:CDS 55.0%
GATGCAACCGCAAATGGAGG+CGG - chr8_3:18279138-18279157 Msa1280190:CDS 55.0%
CAAGGCAAGGATCGTGGTTC+GGG - chr8_3:18279550-18279569 Msa1280190:five_prime_UTR 55.0%
GGCCCTCGTCGAGACTCTTA+TGG - chr8_3:18275045-18275064 Msa1280190:intron 60.0%
ACCTCGCGAACCGGAACCAA+AGG + chr8_3:18275602-18275621 None:intergenic 60.0%
TGCAGAAGGGGTTTGGGCTG+TGG - chr8_3:18275649-18275668 Msa1280190:intron 60.0%
!! TGGGTTTTGGCGCGTCTCGT+TGG - chr8_3:18277566-18277585 Msa1280190:intron 60.0%
!! GGGTTTTGGCGCGTCTCGTT+GGG - chr8_3:18277567-18277586 Msa1280190:intron 60.0%
! GCACTCGCACTGGCGTTGTA+AGG + chr8_3:18277599-18277618 None:intergenic 60.0%
AGAGTGGTCTCGAGAGGGAG+CGG + chr8_3:18277644-18277663 None:intergenic 60.0%
GTGCCTCGACGGTCCACAAA+TGG - chr8_3:18277977-18277996 Msa1280190:CDS 60.0%
ATGATCCAGGCGAGCCACCA+GGG - chr8_3:18278061-18278080 Msa1280190:CDS 60.0%
CGGTGGCGATTCAGCTTACG+TGG - chr8_3:18279050-18279069 Msa1280190:CDS 60.0%
GGCGATGCAACCGCAAATGG+AGG - chr8_3:18279135-18279154 Msa1280190:CDS 60.0%
! GCCTTTGGTTCCGGTTCGCG+AGG - chr8_3:18275598-18275617 Msa1280190:intron 65.0%
GCTCCCTCTCGAGACCACTC+TGG - chr8_3:18277643-18277662 Msa1280190:intron 65.0%
TGCAGGGGTCTGTGCCTCGA+CGG - chr8_3:18277966-18277985 Msa1280190:CDS 65.0%
GATGATCCAGGCGAGCCACC+AGG - chr8_3:18278060-18278079 Msa1280190:CDS 65.0%
GCGCTCAACACGATCCCTGG+TGG + chr8_3:18278078-18278097 None:intergenic 65.0%
GCTGCGCTCAACACGATCCC+TGG + chr8_3:18278081-18278100 None:intergenic 65.0%
CGTGTTGAGCGCAGCCACGT+CGG - chr8_3:18278086-18278105 Msa1280190:CDS 65.0%
GTCAGGGACGATGGCGAAGC+CGG + chr8_3:18279088-18279107 None:intergenic 65.0%
GGCTTCGCCATCGTCCCTGA+CGG - chr8_3:18279087-18279106 Msa1280190:CDS 65.0%
CCATCGTCCCTGACGGTCCT+GGG - chr8_3:18279094-18279113 Msa1280190:CDS 65.0%
CACGTGACCCAGGACCGTCA+GGG + chr8_3:18279104-18279123 None:intergenic 65.0%
AACCGCAAATGGAGGCGGCG+AGG - chr8_3:18279143-18279162 Msa1280190:CDS 65.0%
GTCTCGAGAGGGAGCGGCAG+AGG + chr8_3:18277638-18277657 None:intergenic 70.0%
ACGATCCCTGGTGGCTCGCC+TGG + chr8_3:18278069-18278088 None:intergenic 70.0%
TGAGCGCAGCCACGTCGGTG+TGG - chr8_3:18278091-18278110 Msa1280190:CDS 70.0%
AGCCACGTCGGTGTGGCTCC+CGG - chr8_3:18278098-18278117 Msa1280190:CDS 70.0%
AACCGGGAGCCACACCGACG+TGG + chr8_3:18278103-18278122 None:intergenic 70.0%
GGGACGATGGCGAAGCCGGA+TGG + chr8_3:18279084-18279103 None:intergenic 70.0%
GCCATCGTCCCTGACGGTCC+TGG - chr8_3:18279093-18279112 Msa1280190:CDS 70.0%
CCCAGGACCGTCAGGGACGA+TGG + chr8_3:18279097-18279116 None:intergenic 70.0%
CCACGTGACCCAGGACCGTC+AGG + chr8_3:18279105-18279124 None:intergenic 70.0%
CCTGACGGTCCTGGGTCACG+TGG - chr8_3:18279102-18279121 Msa1280190:CDS 70.0%
GGCCTCGCCGCCTCCATTTG+CGG + chr8_3:18279148-18279167 None:intergenic 70.0%
GGCGGCGAGGCCCGTGTTAG+CGG - chr8_3:18279156-18279175 Msa1280190:CDS 75.0%
GCGGCGAGGCCCGTGTTAGC+GGG - chr8_3:18279157-18279176 Msa1280190:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 18273156 18279640 18273156 ID=Msa1280190;Name=Msa1280190
chr8_3 mRNA 18273156 18279640 18273156 ID=Msa1280190-mRNA-1;Parent=Msa1280190;Name=Msa1280190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=424|1|1|1|1|1|9|320|810
chr8_3 exon 18273156 18273862 18273156 ID=Msa1280190-mRNA-1:exon:6923;Parent=Msa1280190-mRNA-1
chr8_3 exon 18274527 18274894 18274527 ID=Msa1280190-mRNA-1:exon:6922;Parent=Msa1280190-mRNA-1
chr8_3 exon 18275132 18275306 18275132 ID=Msa1280190-mRNA-1:exon:6921;Parent=Msa1280190-mRNA-1
chr8_3 exon 18277012 18277224 18277012 ID=Msa1280190-mRNA-1:exon:6920;Parent=Msa1280190-mRNA-1
chr8_3 exon 18277403 18277504 18277403 ID=Msa1280190-mRNA-1:exon:6919;Parent=Msa1280190-mRNA-1
chr8_3 exon 18277724 18278398 18277724 ID=Msa1280190-mRNA-1:exon:6918;Parent=Msa1280190-mRNA-1
chr8_3 exon 18278513 18278630 18278513 ID=Msa1280190-mRNA-1:exon:6917;Parent=Msa1280190-mRNA-1
chr8_3 exon 18278712 18278926 18278712 ID=Msa1280190-mRNA-1:exon:6916;Parent=Msa1280190-mRNA-1
chr8_3 exon 18279037 18279640 18279037 ID=Msa1280190-mRNA-1:exon:6915;Parent=Msa1280190-mRNA-1
chr8_3 five_prime_UTR 18279217 18279640 18279217 ID=Msa1280190-mRNA-1:five_prime_utr;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18279037 18279216 18279037 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18278712 18278926 18278712 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18278513 18278630 18278513 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18277724 18278398 18277724 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18277403 18277504 18277403 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18277012 18277224 18277012 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18275132 18275306 18275132 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18274527 18274894 18274527 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 CDS 18273476 18273862 18273476 ID=Msa1280190-mRNA-1:cds;Parent=Msa1280190-mRNA-1
chr8_3 three_prime_UTR 18273156 18273475 18273156 ID=Msa1280190-mRNA-1:three_prime_utr;Parent=Msa1280190-mRNA-1
Gene Sequence

>Msa1280190

ATGAGTTTTGGGGGGTTTGTAGAGAACAATTCAGGAGGTGGTGGAGGTGTAAGAAACATAGGAGAAATCTCTTACAACAACGAAAGAATGCCGTTTGGTTCTTTCTCTCAACCTCGTCTTGTTACTTCTCCAGCTTTGGCTAAATCAATGTTCAACTCACCTGGATTATCACTTGCACTTCAAACAAATATTGATGGACAAGAAGATGTGAATGGATCAATGCATGGGAATTATGAGCAAAATGGTTTGAGAAGAAGTAGAGAAGAGGAACAAAGTAGATCTGGTAGTGATAACTTGGATGGTGTTTCTGGTGATGAGCAAGATGCTGATGACAAGCCTCCTAGGAAGAAGAGATATCACCGACACACTCCTCAACAGATTCAAGAGCTTGAAAGTTTGTTTAAGGAGTGTCCTCACCCAGATGAGAAACAAAGATTGGAGCTTAGTAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACTCAACTGGAAAGGCATGAGAACAATTTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAATATGTCTATAAGGGATGCAATGAGGAATCCTATTTGTTCAAATTGTGGTGGTCCAGCTATGATCGGCGAGATTTCACTCGAGGAACAACACCTTCGAATCGAGAATGCGAGGTTGAAGGACGAGCTAGATAGAGTTTGTGCACTTGCTGGAAAATTTTTAGGCCGTCCGATTTCTTCGCTACCCAACTCAAGTTTAGAGCTTGGTGTTGGAGGAAACAACAATAATGGTTTTAATGTGATGAATAATGTGCCTTCATCATTACCTGATTTTAGTTCAGGAATGTCTAATAACCCTTTAGCCATTGTGTCTCCTTCAAATAGACAAACATCTATGGTGACTACTGGCTTTGATAGATCGGTCGAAAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCTATGGATGAGTTGGTTAAGATGGCACAAACTAATGACCCTCTTTGGATTAGGAGTATAGAAGGAGGAAGGGAAATTTTGAACCATGAGGAATATTTGAGGACATTCACTCCTTGCATAGGTTTGAAACCTAATGGTTTTGTTTCTGAGGCCTCAAGGGAAACTGGTACTGTCATCATCAATAGCTTGGCCCTCGTCGAGACTCTTATGGACTCGAATCGATGGATAGAAATGTTTCCTTGTATCATTGCAAGAACCTCCACAAATGAAGTTATATCTAATGGAATAAATGGAAGAAGAAATGGTGCACTTCAACTTATGCAAGCTGAACTTCATGTGCTATCGCCTTTGGTTCCGGTTCGCGAGGTAAATTTCCTTAGGTTTTGCAAGCAACATGCAGAAGGGGTTTGGGCTGTGGTTGACGTGTCTATAGATACCATCAGAGAAACTTCTGGTGCTACAAGTTTTGTGAACTGTAGGAAGCTTCCCTCTGGTTGTGTTGTGCAAGATATGCCAAATGGTTACTCCAAGGTGACGTGGGTGGAACATACAGAATATGAGGAAAATCAAGTCCACCAGCTGTATAGACCTTTGTTAAGCTCAGGCATGGGTTTTGGCGCGTCTCGTTGGGTCGCTACCTTACAACGCCAGTGCGAGTGCCTTGCCATATTAATGTCCTCTGCCGCTCCCTCTCGAGACCACTCTGCAATAACAGCAGGAGGAAGGCGAAGCATGCTGAAGCTAGCACAGCGAATGACAAACAACTTCTGTGCAGGGGTCTGTGCCTCGACGGTCCACAAATGGAACAAACTTAACCCTGGTAATGTAGACGAAGATGTGAGGGTGATGACACGAAAGAGTGTCGATGATCCAGGCGAGCCACCAGGGATCGTGTTGAGCGCAGCCACGTCGGTGTGGCTCCCGGTTTCGCCTCAAAGACTGTTTGATTTTCTGCGTGACGAAAGGCTCCGTAGCGAATGGGATATACTATCAAATGGTGGTCCTATGCAAGAGATGGCTCATATTGCTAAAGGACAAGATCATGGCAACTGTGTTTCTCTTCTCCGTGCTAGTGCAATGAATTCCAACCAGAGTAGCATGTTGATACTACAAGAAACATGCATAGACGAGGCGGGGTCGCTTGTTGTCTATGCGCCGGTCGATATTCCAGCTATGCATGTTGTCATGAACGGTGGCGATTCAGCTTACGTGGCATTACTACCATCCGGCTTCGCCATCGTCCCTGACGGTCCTGGGTCACGTGGACTAGAGAATGGCGATGCAACCGCAAATGGAGGCGGCGAGGCCCGTGTTAGCGGGTCCCTTTTAACTGTGGCGTTTCAAATCCTTGTGAATAGTCTTCCAACAGCAAAACTCACAGTGGAATCAGTTGAAACAGTGAACAATCTCATTTCATGCACTGTTCAGAAAATCAAAGCAGCACTTCAATGTGAAAGCTGA
Protein sequence

>Msa1280190

MSFGGFVENNSGGGGGVRNIGEISYNNERMPFGSFSQPRLVTSPALAKSMFNSPGLSLALQTNIDGQEDVNGSMHGNYEQNGLRRSREEEQSRSGSDNLDGVSGDEQDADDKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENNLLRQENDKLRAENMSIRDAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNNNNGFNVMNNVPSSLPDFSSGMSNNPLAIVSPSNRQTSMVTTGFDRSVERSMFLELALAAMDELVKMAQTNDPLWIRSIEGGREILNHEEYLRTFTPCIGLKPNGFVSEASRETGTVIINSLALVETLMDSNRWIEMFPCIIARTSTNEVISNGINGRRNGALQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGATSFVNCRKLPSGCVVQDMPNGYSKVTWVEHTEYEENQVHQLYRPLLSSGMGFGASRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGLENGDATANGGGEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES*