AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323310 MtrunA17_Chr8g0350321 99.507 811 3 1 1 811 1 810 0.0 1667
Msa1323310 MtrunA17_Chr7g0246631 81.305 797 114 13 31 811 1 778 0.0 1279
Msa1323310 MtrunA17_Chr1g0203671 65.102 788 245 13 40 808 14 790 0.0 981
Msa1323310 MtrunA17_Chr2g0322731 55.526 751 275 13 78 810 59 768 0.0 787
Msa1323310 MtrunA17_Chr4g0024351 54.740 749 295 12 75 811 17 733 0.0 776
Msa1323310 MtrunA17_Chr6g0472471 52.406 769 336 13 59 807 7 765 0.0 763
Msa1323310 MtrunA17_Chr6g0481041 49.239 723 316 13 116 811 29 727 0.0 673
Msa1323310 MtrunA17_Chr2g0331581 45.690 696 327 11 120 810 143 792 0.0 629
Msa1323310 MtrunA17_Chr5g0410711 44.622 753 376 19 80 811 49 781 0.0 622
Msa1323310 MtrunA17_Chr5g0394111 46.800 500 249 7 315 807 157 646 3.95e-149 452
Msa1323310 MtrunA17_Chr5g0394111 46.154 156 78 3 81 236 3 152 1.24e-29 125
Msa1323310 MtrunA17_Chr7g0224451 43.400 500 206 11 110 600 10 441 7.76e-124 379
Msa1323310 MtrunA17_Chr2g0292731 37.475 491 287 11 325 807 70 548 8.58e-98 315
Msa1323310 MtrunA17_Chr2g0292741 36.605 489 289 11 325 807 62 535 2.88e-93 302
Msa1323310 MtrunA17_Chr7g0224481 41.688 391 160 8 110 493 10 339 3.91e-85 274
Msa1323310 MtrunA17_Chr7g0224491 47.352 321 136 9 496 809 1 295 1.78e-82 266
Msa1323310 MtrunA17_Chr2g0292761 30.323 620 345 18 195 807 1 540 2.57e-75 254
Msa1323310 MtrunA17_Chr5g0419821 53.543 127 58 1 111 236 28 154 3.22e-41 149
Msa1323310 MtrunA17_Chr2g0319671 32.946 258 132 4 320 544 19 268 3.36e-38 144
Msa1323310 MtrunA17_Chr2g0319701 39.004 241 127 7 577 811 1 227 1.48e-37 140
Msa1323310 MtrunA17_Chr2g0319681 36.250 240 137 5 577 811 1 229 5.92e-35 133
Msa1323310 MtrunA17_Chr1g0205981 35.349 215 104 5 171 377 1 188 5.00e-29 115
Msa1323310 MtrunA17_Chr2g0319691 42.478 113 61 1 432 544 1 109 1.35e-26 106
Msa1323310 MtrunA17_Chr7g0224461 48.780 123 51 3 692 809 1 116 8.83e-26 102
Msa1323310 MtrunA17_Chr2g0304191 36.641 131 82 1 327 456 1 131 4.01e-22 93.2
Msa1323310 MtrunA17_Chr8g0340411 21.756 763 413 27 119 807 15 667 2.05e-21 100
Msa1323310 MtrunA17_Chr7g0224431 35.976 164 59 5 342 503 1 120 4.66e-17 78.2
Msa1323310 MtrunA17_Chr3g0140351 21.730 497 295 17 376 807 205 672 1.68e-14 77.8
Msa1323310 MtrunA17_Chr2g0331131 21.687 498 295 17 376 807 203 671 1.28e-12 71.6
Msa1323310 MtrunA17_Chr1g0179581 34.884 86 56 0 117 202 26 111 1.23e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323310 AT4G00730.1 68.516 829 216 11 1 811 1 802 0.0 1111
Msa1323310 AT3G61150.1 65.584 831 242 17 1 811 1 807 0.0 1048
Msa1323310 AT4G04890.2 55.689 747 278 14 83 810 26 738 0.0 803
Msa1323310 AT4G04890.1 55.689 747 278 14 83 810 26 738 0.0 803
Msa1323310 AT4G21750.2 55.204 759 285 10 83 810 26 760 0.0 798
Msa1323310 AT4G21750.1 55.204 759 285 10 83 810 26 760 0.0 798
Msa1323310 AT4G21750.3 55.204 759 285 10 83 810 26 760 0.0 798
Msa1323310 AT4G21750.4 55.204 759 285 10 83 810 26 760 0.0 798
Msa1323310 AT1G05230.8 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.4 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.9 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.10 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.7 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.11 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.2 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.6 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.5 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.1 52.487 764 316 14 51 811 1 720 0.0 768
Msa1323310 AT1G05230.3 52.487 764 314 15 51 811 1 718 0.0 764
Msa1323310 AT5G52170.3 54.270 726 254 12 89 808 26 679 0.0 751
Msa1323310 AT5G52170.1 54.270 726 254 12 89 808 26 679 0.0 751
Msa1323310 AT5G52170.2 53.899 731 254 13 89 808 26 684 0.0 745
Msa1323310 AT4G00730.2 64.187 578 169 9 1 560 1 558 0.0 721
Msa1323310 AT1G73360.1 49.215 701 328 12 116 807 32 713 0.0 627
Msa1323310 AT1G05230.12 50.786 636 277 13 51 683 1 603 0.0 614
Msa1323310 AT1G17920.2 46.759 725 327 17 101 811 6 685 0.0 612
Msa1323310 AT1G17920.1 46.759 725 327 17 101 811 6 685 0.0 612
Msa1323310 AT2G32370.1 43.036 718 340 11 110 811 60 724 0.0 576
Msa1323310 AT1G79840.1 42.796 701 339 12 116 810 101 745 0.0 566
Msa1323310 AT1G79840.3 42.796 701 339 12 116 810 43 687 0.0 565
Msa1323310 AT1G79840.6 42.796 701 339 12 116 810 43 687 0.0 565
Msa1323310 AT1G79840.2 40.377 795 392 15 42 810 36 774 0.0 563
Msa1323310 AT5G46880.3 42.162 740 373 19 101 807 89 806 5.34e-179 535
Msa1323310 AT5G46880.1 42.162 740 373 19 101 807 89 806 5.34e-179 535
Msa1323310 AT5G46880.2 42.162 740 373 19 101 807 89 806 5.34e-179 535
Msa1323310 AT4G25530.1 39.360 719 377 13 98 811 22 686 3.59e-163 490
Msa1323310 AT1G79840.4 39.910 664 323 13 42 679 7 620 2.88e-156 470
Msa1323310 AT4G17710.1 38.810 706 340 17 111 807 81 703 7.31e-146 446
Msa1323310 AT3G03260.1 36.878 743 389 21 98 809 3 696 2.22e-143 439
Msa1323310 AT5G17320.1 35.772 738 421 20 101 810 6 718 6.52e-130 405
Msa1323310 AT1G34650.1 34.746 708 420 17 123 810 23 708 1.55e-119 377
Msa1323310 AT1G79840.5 41.071 448 210 8 116 558 101 499 4.26e-108 341
Msa1323310 AT3G03260.2 36.252 571 312 16 98 651 3 538 9.28e-106 336
Msa1323310 AT5G07260.1 28.369 564 317 17 182 740 10 491 5.46e-56 202
Msa1323310 AT5G07260.2 28.114 562 316 16 182 740 10 486 9.29e-56 201
Msa1323310 AT4G32880.1 23.062 503 291 19 370 807 199 670 1.17e-12 72.4
Msa1323310 AT1G30490.1 37.143 105 51 3 104 193 6 110 1.47e-12 72.0

Find 237 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCGATTT+TGG 0.132742 8_4:+31573843 None:intergenic
CCAAGATTTACTTGTGATTA+AGG 0.152156 8_4:-31574633 Msa1323310:five_prime_UTR
CCAAGCTCTAAACTTGAATT+TGG 0.182533 8_4:+31573449 None:intergenic
GATAACTTGGATGGTGTTTC+TGG 0.199972 8_4:-31574123 Msa1323310:CDS
TCCAATCTTTGTTTCTCATC+TGG 0.219888 8_4:+31573914 None:intergenic
GTGATATCTAATGGAATAAA+TGG 0.221660 8_4:-31572747 Msa1323310:CDS
AAAATGTAATTGGTGGGATT+TGG 0.226937 8_4:-31568986 Msa1323310:three_prime_UTR
AAATGTAATTGGTGGGATTT+GGG 0.251833 8_4:-31568985 Msa1323310:three_prime_UTR
TTTGAAACGCCACGGTTAAA+AGG 0.256807 8_4:+31569230 None:intergenic
GAACAAAGACAGAGAGATTA+TGG 0.263067 8_4:+31574726 None:intergenic
GTGGGGTATTTGATGAGTTT+TGG 0.276571 8_4:-31574541 Msa1323310:exon
GCACTTGCTGGAAAGTTTCT+AGG 0.281757 8_4:-31573491 Msa1323310:CDS
AAAGATTGGAGCTTAGTAAA+AGG 0.282647 8_4:-31573901 Msa1323310:CDS
TTTACTTGTGATTAAGGGTT+TGG 0.290354 8_4:-31574627 Msa1323310:five_prime_UTR
AGCAGCATGCAGAAGGTGTT+TGG 0.291268 8_4:-31572451 Msa1323310:CDS
TTTGTGTTATAGTTTGTTTA+AGG 0.293837 8_4:-31573948 Msa1323310:intron
CACAAACTAATGACCCTCTT+TGG 0.295700 8_4:-31573211 Msa1323310:CDS
GAGCTGAGAATATGTCTATA+AGG 0.296096 8_4:-31573640 Msa1323310:CDS
GCTTAGTAAAAGGCTTTGTT+TGG 0.322328 8_4:-31573891 Msa1323310:CDS
CATGGGAATTATGAGCAAAA+TGG 0.323679 8_4:-31574189 Msa1323310:CDS
AAACAAGACAAGTTAAGTTT+TGG 0.327392 8_4:-31573868 Msa1323310:CDS
GATATCTATCTATCTTATCT+AGG 0.327999 8_4:-31568898 Msa1323310:three_prime_UTR
TGCATTGGTTTGAAACCTAA+TGG 0.330001 8_4:-31573122 Msa1323310:CDS
GGCCCTCGTCGAGACTCTTA+TGG 0.331651 8_4:-31573048 Msa1323310:CDS
CGCCTCGCCGCCTCCATTTG+CGG 0.333322 8_4:+31569267 None:intergenic
GATAGAGTTTGTGCACTTGC+TGG 0.335931 8_4:-31573503 Msa1323310:CDS
CTAATGACCCTCTTTGGATT+AGG 0.339140 8_4:-31573205 Msa1323310:CDS
AACAGTCTTTGAGGCGAAAC+CGG 0.340570 8_4:+31570030 None:intergenic
TGAACTTGCTTTGGCTGCTA+TGG 0.341605 8_4:-31573252 Msa1323310:CDS
CCAATCTTTGTTTCTCATCT+GGG 0.343195 8_4:+31573915 None:intergenic
TTCAAATAGACAAACATCTA+TGG 0.348262 8_4:-31573318 Msa1323310:CDS
TATGTTTCTTGAACTTGCTT+TGG 0.349553 8_4:-31573261 Msa1323310:CDS
ACGATCCCTGGTGGCTCGCC+TGG 0.350440 8_4:+31570081 None:intergenic
CAAGATTTACTTGTGATTAA+GGG 0.370497 8_4:-31574632 Msa1323310:five_prime_UTR
CAAGGCAAGGATCGTGGTTC+GGG 0.371722 8_4:-31568859 Msa1323310:three_prime_UTR
ACTTCATGTGCTATCGCCTT+TGG 0.371763 8_4:-31572510 Msa1323310:CDS
GGTTAAGTTTGTTCCATTTG+TGG 0.375533 8_4:+31570157 None:intergenic
ACGATCCTTGCCTTGTGTTA+AGG 0.377368 8_4:+31568867 None:intergenic
ACAAACGAAGTGATATCTAA+TGG 0.377930 8_4:-31572756 Msa1323310:CDS
TGGGGTTTGGTGCGTCTCGT+TGG 0.382984 8_4:-31570580 Msa1323310:CDS
TATCTATCTTATCTAGGGTT+AGG 0.388576 8_4:-31568892 Msa1323310:three_prime_UTR
ATAGATGTTTGTCTATTTGA+AGG 0.389308 8_4:+31573320 None:intergenic
ATGAAGCAAACAAATATTGA+TGG 0.395849 8_4:-31574237 Msa1323310:intron
TCTGAGGCCTCAAGGGAAAC+TGG 0.398976 8_4:-31573092 Msa1323310:CDS
AGGAAATTTACCTCGCGAAC+TGG 0.406547 8_4:+31572485 None:intergenic
GGGTTTGTAGAGAACAATTC+AGG 0.408018 8_4:-31574517 Msa1323310:CDS
GATACCATCAGAGAAACTTC+TGG 0.408289 8_4:-31572407 Msa1323310:CDS
CCACCGCAATTCGAACAAAT+AGG 0.409469 8_4:+31573602 None:intergenic
CTTTGGATTAGGAGTATAGA+AGG 0.410489 8_4:-31573194 Msa1323310:CDS
TACACTGTTTCTCTCTCAAA+AGG 0.413538 8_4:-31574918 Msa1323310:five_prime_UTR
GCAGCATGCAGAAGGTGTTT+GGG 0.413687 8_4:-31572450 Msa1323310:CDS
TTGGTAATGGATGAAAGAAA+AGG 0.414205 8_4:-31569012 Msa1323310:three_prime_UTR
TCTTGTTACTTCTCCAGCCT+TGG 0.415425 8_4:-31574410 Msa1323310:CDS
GGAATAAATGGAACAAGAAA+TGG 0.416572 8_4:-31572735 Msa1323310:CDS
ATTAGATATCACTTCGTTTG+TGG 0.416727 8_4:+31572758 None:intergenic
AGCGGCAGAGGACATTAATA+TGG 0.417806 8_4:+31570523 None:intergenic
ATTACCTTGGAGTAACCATT+TGG 0.419128 8_4:+31572326 None:intergenic
AACATTGATTTAGCCAAGGC+TGG 0.419644 8_4:+31574397 None:intergenic
GTCTCTAGAGGGAGCGGCAG+AGG 0.420205 8_4:+31570511 None:intergenic
ACAAGGCAAGGATCGTGGTT+CGG 0.423215 8_4:-31568860 Msa1323310:three_prime_UTR
ACCTCTGTTGAGCTCAGGTA+TGG 0.428362 8_4:-31570600 Msa1323310:CDS
ACAATTGTACTAGACTCAAT+TGG 0.428686 8_4:-31573708 Msa1323310:intron
GAAGAGGAACAAAGTAGATC+TGG 0.428814 8_4:-31574150 Msa1323310:CDS
TTAGGAGTATAGAAGGAGGA+AGG 0.429115 8_4:-31573187 Msa1323310:CDS
AAGGAGACACAATGGCTAAA+GGG 0.434268 8_4:+31573339 None:intergenic
TTGAGCTCAGGTATGGGGTT+TGG 0.434561 8_4:-31570593 Msa1323310:CDS
AATTGAGAATGCGAGGTTGA+AGG 0.436963 8_4:-31573534 Msa1323310:CDS
GAAATCTCGCCGATCATAGC+TGG 0.437015 8_4:+31573578 None:intergenic
CCACGTGACCCAGGACCGTC+AGG 0.438864 8_4:+31569310 None:intergenic
GTGCCTCGACGGTCCACAAA+TGG 0.441844 8_4:-31570170 Msa1323310:CDS
AATGGCGATGCAACCGCAAA+TGG 0.441940 8_4:-31569280 Msa1323310:CDS
GCCTCAGAAACAAAACCATT+AGG 0.446780 8_4:+31573107 None:intergenic
GACATTCCTGAACTAAAATC+AGG 0.446855 8_4:+31573368 None:intergenic
CGAAAGAGTGTCGATGATCC+AGG 0.449464 8_4:-31570099 Msa1323310:CDS
GGGGTTTGGTGCGTCTCGTT+GGG 0.449682 8_4:-31570579 Msa1323310:CDS
AACAATTCAGGAGGTGGTGG+TGG 0.452396 8_4:-31574505 Msa1323310:CDS
CCAAATTCAAGTTTAGAGCT+TGG 0.452576 8_4:-31573449 Msa1323310:CDS
CCTTAATCACAAGTAAATCT+TGG 0.454748 8_4:+31574633 None:intergenic
AACATCAATGAAAGGAATAG+TGG 0.455334 8_4:-31568800 Msa1323310:three_prime_UTR
GGCGGCGAGGCGCGTGTTAG+CGG 0.455890 8_4:-31569256 Msa1323310:CDS
CGGTGATATCTCTTCTTCCT+AGG 0.457526 8_4:+31574072 None:intergenic
AGCCACGTCGGTGTGGCTCC+CGG 0.460196 8_4:-31570049 Msa1323310:CDS
ACATCTTCGTCTACATTACC+AGG 0.462223 8_4:+31570135 None:intergenic
TTGAAACGCCACGGTTAAAA+GGG 0.462963 8_4:+31569231 None:intergenic
AGGACATTCACTCCTTGCAT+TGG 0.464695 8_4:-31573137 Msa1323310:CDS
CCCAGATGAGAAACAAAGAT+TGG 0.465465 8_4:-31573915 Msa1323310:CDS
GAATTTGGTAACGAAGAAAT+CGG 0.466807 8_4:+31573464 None:intergenic
CCTCTGTTGAGCTCAGGTAT+GGG 0.468963 8_4:-31570599 Msa1323310:CDS
CTTTGTTTCTCATCTGGGTG+AGG 0.471059 8_4:+31573920 None:intergenic
TGGTAATGGATGAAAGAAAA+GGG 0.474289 8_4:-31569011 Msa1323310:three_prime_UTR
AGCTGAGAATATGTCTATAA+GGG 0.474540 8_4:-31573639 Msa1323310:CDS
AACAACGAAAGAATGCCATT+TGG 0.477954 8_4:-31574451 Msa1323310:CDS
GAAGGAGACACAATGGCTAA+AGG 0.478406 8_4:+31573338 None:intergenic
GTCAGGGACGATGGCGAAGC+CGG 0.479104 8_4:+31569327 None:intergenic
GCTGCGCTCAACACGATCCC+TGG 0.483232 8_4:+31570069 None:intergenic
TTCGCGAGGTAAATTTCCTT+AGG 0.483462 8_4:-31572481 Msa1323310:CDS
TTTGGCTGCTATGGATGAGT+TGG 0.483619 8_4:-31573243 Msa1323310:CDS
AACTGTAGGAAGCTTCCCTC+TGG 0.485745 8_4:-31572368 Msa1323310:CDS
TAGATCTGGTAGTGATAACT+TGG 0.486150 8_4:-31574136 Msa1323310:CDS
AGTTTAGAGCTTGGTGTTGG+AGG 0.487497 8_4:-31573440 Msa1323310:CDS
AGGTTCCTTGCATGGTGGTA+AGG 0.488538 8_4:-31568920 Msa1323310:three_prime_UTR
ATGACAAACAACTTCTGTGC+AGG 0.491411 8_4:-31570198 Msa1323310:CDS
AATTCAGGAGGTGGTGGTGG+AGG 0.500020 8_4:-31574502 Msa1323310:CDS
CACTGTTTCAACTGACTCCA+CGG 0.502372 8_4:+31569174 None:intergenic
CAAACATCTATGGTGACTAC+TGG 0.504285 8_4:-31573308 Msa1323310:CDS
TTCATGACAACATGCATAGC+TGG 0.505873 8_4:+31569385 None:intergenic
ACAGTCTTTGAGGCGAAACC+GGG 0.506478 8_4:+31570031 None:intergenic
CTCTGTTGAGCTCAGGTATG+GGG 0.507146 8_4:-31570598 Msa1323310:CDS
CAGAGAGATTATGGAGACAA+AGG 0.507293 8_4:+31574735 None:intergenic
GTAGTATCAACATGCTACTC+TGG 0.510426 8_4:+31569464 None:intergenic
CTAAAATCAGGTAATGTTGA+AGG 0.511223 8_4:+31573380 None:intergenic
TAGGAGTATAGAAGGAGGAA+GGG 0.511252 8_4:-31573186 Msa1323310:CDS
CGTCGAGACTCTTATGGACT+CGG 0.512419 8_4:-31573042 Msa1323310:intron
AGTCAAGAACGAACCACTCA+TGG 0.514515 8_4:-31568953 Msa1323310:three_prime_UTR
ATATGGCAAGGCACTCGCAC+TGG 0.516470 8_4:+31570540 None:intergenic
TACTGTCATCATCAATAGCT+TGG 0.517600 8_4:-31573069 Msa1323310:CDS
GAATGGGATATACTATCAAA+TGG 0.517618 8_4:-31569976 Msa1323310:CDS
TGCAGGGGTCTGTGCCTCGA+CGG 0.517623 8_4:-31570181 Msa1323310:CDS
GGTGGAACATACAGAATATG+AGG 0.517671 8_4:-31570648 Msa1323310:CDS
TCAAGTTTAGAGCTTGGTGT+TGG 0.517962 8_4:-31573443 Msa1323310:CDS
AACAGATTCAAGAGCTTGAA+AGG 0.519002 8_4:-31574038 Msa1323310:intron
TCAAGCTCTTGAATCTGTTG+AGG 0.520625 8_4:+31574042 None:intergenic
GATGCAACCGCAAATGGAGG+CGG 0.528418 8_4:-31569274 Msa1323310:CDS
AAATCGAAGAACACAAATGA+AGG 0.532956 8_4:-31573840 Msa1323310:intron
TATCAACATGCTACTCTGGT+TGG 0.534209 8_4:+31569468 None:intergenic
TACGTGGCATTACTACCATC+CGG 0.534267 8_4:-31569346 Msa1323310:CDS
TGAACCATGAGGAATATTTG+AGG 0.534711 8_4:-31573157 Msa1323310:CDS
ACGAAAGGCTCCGTAGCGAA+TGG 0.534843 8_4:-31569993 Msa1323310:CDS
AGAGAGATTATGGAGACAAA+GGG 0.535460 8_4:+31574736 None:intergenic
AGAAAATCAAACAGTCTTTG+AGG 0.537109 8_4:+31570021 None:intergenic
GTCGCTTGTTGTCTATGCAC+CGG 0.538678 8_4:-31569416 Msa1323310:CDS
TATAGACCTCTGTTGAGCTC+AGG 0.541054 8_4:-31570605 Msa1323310:CDS
AAATCAATGTTCAACTCACC+TGG 0.542999 8_4:-31574385 Msa1323310:CDS
GGTGGAGGTGTAAGAAACAT+AGG 0.543377 8_4:-31574487 Msa1323310:CDS
TGATGAATTTGCAGGTGACA+TGG 0.545053 8_4:-31570670 Msa1323310:intron
GGCATGAGAACAATTTGCTT+AGG 0.546874 8_4:-31573682 Msa1323310:CDS
TCAACAGAGGTCTATACAGC+TGG 0.547015 8_4:+31570612 None:intergenic
CATGCTGCTTGCAAAACCTA+AGG 0.548250 8_4:+31572465 None:intergenic
GATGATCCAGGCGAGCCACC+AGG 0.549531 8_4:-31570087 Msa1323310:CDS
GAAACATGCATAGACGAAGC+GGG 0.550627 8_4:-31569439 Msa1323310:CDS
GTAGAGAACAATTCAGGAGG+TGG 0.551896 8_4:-31574511 Msa1323310:CDS
AATCCTATTTGTTCGAATTG+CGG 0.552002 8_4:-31573605 Msa1323310:CDS
ACACTGTTTCTCTCTCAAAA+GGG 0.552068 8_4:-31574917 Msa1323310:five_prime_UTR
ATATCTATCTATCTTATCTA+GGG 0.552153 8_4:-31568897 Msa1323310:three_prime_UTR
ATTGCTAAAGGACAAGATCA+TGG 0.552765 8_4:-31569928 Msa1323310:CDS
CCCAGGACCGTCAGGGACGA+TGG 0.554778 8_4:+31569318 None:intergenic
CTGTAGGAAGACTATTCACA+AGG 0.558656 8_4:+31569206 None:intergenic
AGAGTGGTCTCTAGAGGGAG+CGG 0.558901 8_4:+31570505 None:intergenic
AGCTCCAGAAGTTTCTCTGA+TGG 0.560178 8_4:+31572403 None:intergenic
GGGTCACGTGGACTAGAGAA+TGG 0.565791 8_4:-31569298 Msa1323310:CDS
GGCTTCGCCATCGTCCCTGA+CGG 0.566065 8_4:-31569325 Msa1323310:CDS
AGGTTCCTTAACACAAGGCA+AGG 0.568916 8_4:-31568872 Msa1323310:three_prime_UTR
AGAAACATGCATAGACGAAG+CGG 0.568948 8_4:-31569440 Msa1323310:CDS
AGATATCACTTCGTTTGTGG+AGG 0.571311 8_4:+31572761 None:intergenic
GAGAACAATTCAGGAGGTGG+TGG 0.572830 8_4:-31574508 Msa1323310:CDS
TATGGATGAGTTGGTTAAGA+TGG 0.580312 8_4:-31573234 Msa1323310:CDS
TTTGAGAAGAAGTAGAGAAG+AGG 0.581124 8_4:-31574166 Msa1323310:CDS
ACAAGTGCAAGTGATAATCC+AGG 0.581955 8_4:+31574367 None:intergenic
TGCATAGCTGGAATGTCGAC+CGG 0.582197 8_4:+31569397 None:intergenic
TGCGGTGGTCCAGCTATGAT+CGG 0.583098 8_4:-31573587 Msa1323310:CDS
ACCTCGCGAACTGGAACCAA+AGG 0.584282 8_4:+31572494 None:intergenic
GATGGACAAGAAGATGTGAA+TGG 0.584326 8_4:-31574219 Msa1323310:CDS
GAGGTTCTTGCAATGATACA+AGG 0.584664 8_4:+31572780 None:intergenic
CACAAGGATTTGAAACGCCA+CGG 0.585265 8_4:+31569222 None:intergenic
TGGATTAGGAGTATAGAAGG+AGG 0.585727 8_4:-31573191 Msa1323310:CDS
GATATCCTTACCACCATGCA+AGG 0.588151 8_4:+31568915 None:intergenic
ATATGAGCCATCTCTTGCAT+AGG 0.588298 8_4:+31569949 None:intergenic
ATAGTATATCCCATTCGCTA+CGG 0.590010 8_4:+31569983 None:intergenic
TGTCTCACAGCAATAACAGC+AGG 0.590368 8_4:-31570255 Msa1323310:intron
AATACCAGAGTGGTCTCTAG+AGG 0.590377 8_4:+31570499 None:intergenic
GGCGATGCAACCGCAAATGG+AGG 0.590559 8_4:-31569277 Msa1323310:CDS
GGTTGAGAGAAAGAACCAAA+TGG 0.592147 8_4:+31574436 None:intergenic
GTTGAACATTGATTTAGCCA+AGG 0.592440 8_4:+31574393 None:intergenic
GAGATGGCTCATATTGCTAA+AGG 0.593426 8_4:-31569940 Msa1323310:CDS
CAGCAATAACAGCAGGAGGA+AGG 0.594087 8_4:-31570248 Msa1323310:CDS
TGACAAACAACTTCTGTGCA+GGG 0.594648 8_4:-31570197 Msa1323310:CDS
ATGTCCTCAAATATTCCTCA+TGG 0.596418 8_4:+31573153 None:intergenic
GCCTTTGGTTCCAGTTCGCG+AGG 0.601016 8_4:-31572495 Msa1323310:CDS
TGATATCTCTTCTTCCTAGG+TGG 0.601999 8_4:+31574075 None:intergenic
TTCTCTAGTCCACGTGACCC+AGG 0.602479 8_4:+31569301 None:intergenic
CCTATTTGTTCGAATTGCGG+TGG 0.602780 8_4:-31573602 Msa1323310:CDS
TGGTGGTCCTATGCAAGAGA+TGG 0.604536 8_4:-31569956 Msa1323310:CDS
CTATACTCCTAATCCAAAGA+GGG 0.605820 8_4:+31573198 None:intergenic
GGGACGATGGCGAAGCCGGA+TGG 0.606268 8_4:+31569331 None:intergenic
ATACCAGAGTGGTCTCTAGA+GGG 0.606940 8_4:+31570500 None:intergenic
CAGAGGACATTAATATGGCA+AGG 0.607435 8_4:+31570528 None:intergenic
AAAGAAAACTTACACTAGCA+CGG 0.608182 8_4:+31569887 None:intergenic
TCTATACTCCTAATCCAAAG+AGG 0.610543 8_4:+31573197 None:intergenic
GTTCCATTTGTGGACCGTCG+AGG 0.611870 8_4:+31570167 None:intergenic
ATCTTCGAATTGAGAATGCG+AGG 0.613235 8_4:-31573541 Msa1323310:CDS
ATCTATAGACACGTCAACAA+CGG 0.614366 8_4:+31572427 None:intergenic
TGTACTAGACTCAATTGGAA+AGG 0.615468 8_4:-31573703 Msa1323310:intron
ATGATCCAGGCGAGCCACCA+GGG 0.616138 8_4:-31570086 Msa1323310:CDS
TATGCCAAATGGTTACTCCA+AGG 0.620630 8_4:-31572330 Msa1323310:intron
GTTGTGCAAGATATGCCAAA+TGG 0.621690 8_4:-31572341 Msa1323310:CDS
TTAGGTTTCAAACCAATGCA+AGG 0.623981 8_4:+31573125 None:intergenic
TTAACACAAGGCAAGGATCG+TGG 0.631493 8_4:-31568865 Msa1323310:three_prime_UTR
AACCGCAAATGGAGGCGGCG+AGG 0.633084 8_4:-31569269 Msa1323310:CDS
GATGAATTTGCAGGTGACAT+GGG 0.633419 8_4:-31570669 Msa1323310:intron
TCTATTTGAAGGAGACACAA+TGG 0.633437 8_4:+31573331 None:intergenic
GATGTGAATGGATCAATGCA+TGG 0.635991 8_4:-31574207 Msa1323310:CDS
GACAGTACCAGTTTCCCTTG+AGG 0.636068 8_4:+31573085 None:intergenic
ATGTGAATGGATCAATGCAT+GGG 0.636948 8_4:-31574206 Msa1323310:CDS
ATCTTGCACAACACAACCAG+AGG 0.640454 8_4:+31572352 None:intergenic
AATGTAATTGGTGGGATTTG+GGG 0.641941 8_4:-31568984 Msa1323310:three_prime_UTR
TGTCTATAAGGGATGCAATG+AGG 0.645251 8_4:-31573628 Msa1323310:CDS
GTTGGAGGAAACAACAACAA+TGG 0.647127 8_4:-31573425 Msa1323310:CDS
AAGCTGAGTCGTGACATAAG+TGG 0.649475 8_4:-31569098 Msa1323310:exon
GCGCTCAACACGATCCCTGG+TGG 0.649684 8_4:+31570072 None:intergenic
GGGTTAGGTTCCTTAACACA+AGG 0.650520 8_4:-31568877 Msa1323310:three_prime_UTR
TCTGGTAGTGATAACTTGGA+TGG 0.650981 8_4:-31574132 Msa1323310:CDS
AAATGGAACAAACTTAACCC+TGG 0.651008 8_4:-31570153 Msa1323310:CDS
CTCACAGCAATAACAGCAGG+AGG 0.659474 8_4:-31570252 Msa1323310:intron
GCTATGCATGTTGTCATGAA+CGG 0.661756 8_4:-31569382 Msa1323310:CDS
TGAGCGCAGCCACGTCGGTG+TGG 0.662518 8_4:-31570056 Msa1323310:CDS
AACCGGGAGCCACACCGACG+TGG 0.667720 8_4:+31570047 None:intergenic
GACAAACAACTTCTGTGCAG+GGG 0.668278 8_4:-31570196 Msa1323310:CDS
CATCTTCGTCTACATTACCA+GGG 0.669013 8_4:+31570136 None:intergenic
GAATCTGTTGAGGAGTGTGT+CGG 0.670166 8_4:+31574052 None:intergenic
TTGGTAACGAAGAAATCGGA+CGG 0.672520 8_4:+31573468 None:intergenic
GAATTTGCAGGTGACATGGG+TGG 0.674517 8_4:-31570666 Msa1323310:intron
AAACATGCATAGACGAAGCG+GGG 0.675545 8_4:-31569438 Msa1323310:CDS
CACGTGACCCAGGACCGTCA+GGG 0.675779 8_4:+31569311 None:intergenic
GTCCATAAGAGTCTCGACGA+GGG 0.680758 8_4:+31573046 None:intergenic
ATGCTGATGATAAACCACCT+AGG 0.683804 8_4:-31574089 Msa1323310:CDS
TGGGATATACTATCAAATGG+TGG 0.690086 8_4:-31569973 Msa1323310:CDS
GTAATGTAGACGAAGATGTG+AGG 0.695572 8_4:-31570131 Msa1323310:CDS
TTTGTAGAGAACAATTCAGG+AGG 0.696040 8_4:-31574514 Msa1323310:CDS
TAATGTAGACGAAGATGTGA+GGG 0.696882 8_4:-31570130 Msa1323310:CDS
TCTTGCACAACACAACCAGA+GGG 0.701438 8_4:+31572353 None:intergenic
CCCATACCTGAGCTCAACAG+AGG 0.707512 8_4:+31570599 None:intergenic
GCTCCCTCTAGAGACCACTC+TGG 0.708365 8_4:-31570503 Msa1323310:intron
TCCTACAGCAAAACTCACCG+TGG 0.712948 8_4:-31569191 Msa1323310:CDS
GCTGGAGAAGTAACAAGACG+AGG 0.715196 8_4:+31574415 None:intergenic
GAGTTAGAGTAATACCAGAG+TGG 0.730408 8_4:+31570489 None:intergenic
AGTCCATAAGAGTCTCGACG+AGG 0.733323 8_4:+31573045 None:intergenic
ATGCATGTTGTCATGAACGG+TGG 0.758546 8_4:-31569379 Msa1323310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTATTATTA+GGG + chr8_4:31573903-31573922 None:intergenic 0.0%
!! TTATTATTATTATTATTATT+AGG + chr8_4:31573904-31573923 None:intergenic 0.0%
!!! ACTTCTTTTATTTTAATATT+AGG - chr8_4:31571582-31571601 Msa1323310:intron 10.0%
!!! CTTCTTTTATTTTAATATTA+GGG - chr8_4:31571583-31571602 Msa1323310:intron 10.0%
!! TAAAAACAAAAACACAAAAA+TGG + chr8_4:31569745-31569764 None:intergenic 15.0%
!!! TTTTTGTGTTTTTGTTTTTA+AGG - chr8_4:31569745-31569764 Msa1323310:intron 15.0%
!!! TTTTTGAAATTTAATTACCT+TGG + chr8_4:31571434-31571453 None:intergenic 15.0%
!!! GGAAAATTCATATTTTATAT+GGG + chr8_4:31571919-31571938 None:intergenic 15.0%
!!! TGGAAAATTCATATTTTATA+TGG + chr8_4:31571920-31571939 None:intergenic 15.0%
!! ATGAAAATGAGTAATAAAAT+AGG + chr8_4:31572282-31572301 None:intergenic 15.0%
!! GATTTACATGAAAAAATTTA+AGG - chr8_4:31572627-31572646 Msa1323310:intron 15.0%
!! TTCAATTATGTATATATGTA+TGG + chr8_4:31572797-31572816 None:intergenic 15.0%
!! TGACAACATAAAAATAATAT+TGG - chr8_4:31572817-31572836 Msa1323310:intron 15.0%
!! CATTCAAAAAAAATACAATT+TGG + chr8_4:31573471-31573490 None:intergenic 15.0%
!! AAACATTTCTTCAAATTATA+TGG - chr8_4:31573968-31573987 Msa1323310:intron 15.0%
!!! ATTGTTTATTTTGATTTTGT+AGG - chr8_4:31574244-31574263 Msa1323310:intron 15.0%
!!! GTTTTTTTATGTGTTTTGTT+TGG + chr8_4:31568923-31568942 None:intergenic 20.0%
!! AACAACAGAAGAAAAAAAAT+GGG + chr8_4:31568946-31568965 None:intergenic 20.0%
!! AAACAACAGAAGAAAAAAAA+TGG + chr8_4:31568947-31568966 None:intergenic 20.0%
!!! TTTGTGTTATAGTTTGTTTA+AGG - chr8_4:31569796-31569815 Msa1323310:intron 20.0%
!!! ATTATATTTCTACGTAGAAT+GGG + chr8_4:31570893-31570912 None:intergenic 20.0%
!!! AATTATATTTCTACGTAGAA+TGG + chr8_4:31570894-31570913 None:intergenic 20.0%
!! ATATAATTATGAATCTGACT+TGG - chr8_4:31570906-31570925 Msa1323310:intron 20.0%
!! ATAATTGATATTTAGCACTA+CGG + chr8_4:31571073-31571092 None:intergenic 20.0%
!! ACTAAAAAACATGAAATGTA+GGG + chr8_4:31571502-31571521 None:intergenic 20.0%
!! AACTAAAAAACATGAAATGT+AGG + chr8_4:31571503-31571522 None:intergenic 20.0%
!!! ATATGCATAAATAGTCATTT+TGG + chr8_4:31571704-31571723 None:intergenic 20.0%
!! ATTGTTGAATACTTAAAGAT+TGG + chr8_4:31572001-31572020 None:intergenic 20.0%
!! GGTTCTATATATTAAAATAG+TGG + chr8_4:31572070-31572089 None:intergenic 20.0%
!! AATGTACTTATAAGATTACA+AGG + chr8_4:31572152-31572171 None:intergenic 20.0%
!! ATCTATATAGCATAATAGAT+TGG + chr8_4:31572218-31572237 None:intergenic 20.0%
!!! TTTACTAGTACATTGTTTTT+TGG - chr8_4:31572511-31572530 Msa1323310:CDS 20.0%
!! ATGTTAGAGTAAGTTATATA+TGG - chr8_4:31572576-31572595 Msa1323310:intron 20.0%
!!! AGTAGTAATTTTCTATATCA+AGG - chr8_4:31572746-31572765 Msa1323310:CDS 20.0%
!! ATCTAAATACAATGATACAA+TGG - chr8_4:31573381-31573400 Msa1323310:CDS 20.0%
!!! TGAATGTTTTTCAGTAAAAT+GGG + chr8_4:31573421-31573440 None:intergenic 20.0%
!!! TTGAATGTTTTTCAGTAAAA+TGG + chr8_4:31573422-31573441 None:intergenic 20.0%
!! ATTTCTTCAAATTATATGGT+TGG - chr8_4:31573972-31573991 Msa1323310:intron 20.0%
!! ATATCTATCTATCTTATCTA+GGG - chr8_4:31574847-31574866 Msa1323310:five_prime_UTR 20.0%
!!! TGATGTTTTTTTTCAAACTA+GGG + chr8_4:31574931-31574950 None:intergenic 20.0%
!!! TTGATGTTTTTTTTCAAACT+AGG + chr8_4:31574932-31574951 None:intergenic 20.0%
!! TGAAAAAAAACATCAATGAA+AGG - chr8_4:31574936-31574955 Msa1323310:five_prime_UTR 20.0%
! ACAACAGAAGAAAAAAAATG+GGG + chr8_4:31568945-31568964 None:intergenic 25.0%
! CAAGATTTACTTGTGATTAA+GGG - chr8_4:31569112-31569131 Msa1323310:exon 25.0%
!!! GGAAAAAGTTTTGAACTTTT+TGG - chr8_4:31569138-31569157 Msa1323310:CDS 25.0%
!!! AGTTTTGAACTTTTTGGATT+TGG - chr8_4:31569144-31569163 Msa1323310:CDS 25.0%
!!! GTTTTGAACTTTTTGGATTT+GGG - chr8_4:31569145-31569164 Msa1323310:CDS 25.0%
! AGAGAAGAAGAAAAAAAAAG+TGG - chr8_4:31569184-31569203 Msa1323310:CDS 25.0%
! GAGAAGAAGAAAAAAAAAGT+GGG - chr8_4:31569185-31569204 Msa1323310:CDS 25.0%
! AGAAGAAGAAAAAAAAAGTG+GGG - chr8_4:31569186-31569205 Msa1323310:CDS 25.0%
! TTCCATCAAACAAAACAAAA+GGG + chr8_4:31569482-31569501 None:intergenic 25.0%
! TTTCCATCAAACAAAACAAA+AGG + chr8_4:31569483-31569502 None:intergenic 25.0%
! ATGAAGCAAACAAATATTGA+TGG - chr8_4:31569507-31569526 Msa1323310:intron 25.0%
!! AAACAAGACAAGTTAAGTTT+TGG - chr8_4:31569876-31569895 Msa1323310:intron 25.0%
!!! AAGTCATTTTCATTTTCACA+TGG - chr8_4:31569946-31569965 Msa1323310:CDS 25.0%
! AAAAAGTTAGCAACACAAAA+AGG + chr8_4:31570010-31570029 None:intergenic 25.0%
! ATAGATGTTTGTCTATTTGA+AGG + chr8_4:31570427-31570446 None:intergenic 25.0%
! TTCAAATAGACAAACATCTA+TGG - chr8_4:31570426-31570445 Msa1323310:intron 25.0%
! GATCACAATGTTTAAGAAAA+TGG + chr8_4:31570834-31570853 None:intergenic 25.0%
! GTGATATCTAATGGAATAAA+TGG - chr8_4:31570997-31571016 Msa1323310:intron 25.0%
! AAATATCAATTATTGCGTAG+CGG - chr8_4:31571080-31571099 Msa1323310:intron 25.0%
! TTAACGAAAAACACAATGTA+TGG + chr8_4:31571629-31571648 None:intergenic 25.0%
!! GTGTTTTTCGTTAATTAGTT+TGG - chr8_4:31571635-31571654 Msa1323310:intron 25.0%
! ACCATTGTTTAAGTAATATG+TGG - chr8_4:31571728-31571747 Msa1323310:intron 25.0%
! TCCACATATTACTTAAACAA+TGG + chr8_4:31571732-31571751 None:intergenic 25.0%
!! CAATACAATTCTTTGAAAAG+TGG + chr8_4:31571940-31571959 None:intergenic 25.0%
!!! AGTGGATTAATCTATACTTT+AGG + chr8_4:31572052-31572071 None:intergenic 25.0%
! TCTAGTCAATAAGTTTCAAA+AGG + chr8_4:31572116-31572135 None:intergenic 25.0%
!! TAAAGTCAAGCAAGATTTTT+AGG + chr8_4:31572388-31572407 None:intergenic 25.0%
!! AGTACCCTATTTTATGTAAA+TGG - chr8_4:31572413-31572432 Msa1323310:CDS 25.0%
! TGGACCATTTACATAAAATA+GGG + chr8_4:31572420-31572439 None:intergenic 25.0%
! ATGGACCATTTACATAAAAT+AGG + chr8_4:31572421-31572440 None:intergenic 25.0%
! ATTATATGATGAGAGATGAT+TGG + chr8_4:31572475-31572494 None:intergenic 25.0%
! AATGCAATATTAACCATGTT+TGG + chr8_4:31573055-31573074 None:intergenic 25.0%
! AAGATATTTATGTGTAGCAA+AGG + chr8_4:31573295-31573314 None:intergenic 25.0%
!!! GATTTATTTTATGATACGTG+AGG + chr8_4:31573364-31573383 None:intergenic 25.0%
! TACTGAAAAACATTCAATGA+TGG - chr8_4:31573425-31573444 Msa1323310:CDS 25.0%
!!! TGTTTTTGTTGTTGTTGTTT+TGG - chr8_4:31574713-31574732 Msa1323310:five_prime_UTR 25.0%
! GAAAAGGGTAAAAATGTAAT+TGG - chr8_4:31574748-31574767 Msa1323310:five_prime_UTR 25.0%
! GATATCTATCTATCTTATCT+AGG - chr8_4:31574846-31574865 Msa1323310:five_prime_UTR 25.0%
!!! GATGTTTTTTTTCAAACTAG+GGG + chr8_4:31574930-31574949 None:intergenic 25.0%
AACACTGAGAAAAACTTGAA+AGG + chr8_4:31568807-31568826 None:intergenic 30.0%
GAGAGAAAGAAAGAGAAAAA+AGG + chr8_4:31568901-31568920 None:intergenic 30.0%
CCTTAATCACAAGTAAATCT+TGG + chr8_4:31569114-31569133 None:intergenic 30.0%
CCAAGATTTACTTGTGATTA+AGG - chr8_4:31569111-31569130 Msa1323310:exon 30.0%
TTTACTTGTGATTAAGGGTT+TGG - chr8_4:31569117-31569136 Msa1323310:CDS 30.0%
AAAGATTGGAGCTTAGTAAA+AGG - chr8_4:31569843-31569862 Msa1323310:intron 30.0%
! TCATTTGTGTTCTTCGATTT+TGG + chr8_4:31569904-31569923 None:intergenic 30.0%
AAATCGAAGAACACAAATGA+AGG - chr8_4:31569904-31569923 Msa1323310:CDS 30.0%
ACAATTGTACTAGACTCAAT+TGG - chr8_4:31570036-31570055 Msa1323310:CDS 30.0%
AGCTGAGAATATGTCTATAA+GGG - chr8_4:31570105-31570124 Msa1323310:CDS 30.0%
AATCCTATTTGTTCGAATTG+CGG - chr8_4:31570139-31570158 Msa1323310:CDS 30.0%
!! GAATTTGGTAACGAAGAAAT+CGG + chr8_4:31570283-31570302 None:intergenic 30.0%
CTAAAATCAGGTAATGTTGA+AGG + chr8_4:31570367-31570386 None:intergenic 30.0%
!!! ACATTACCTGATTTTAGTTC+AGG - chr8_4:31570370-31570389 Msa1323310:intron 30.0%
! TATGTTTCTTGAACTTGCTT+TGG - chr8_4:31570483-31570502 Msa1323310:intron 30.0%
!! TATTTTTGTGACCACAATTG+AGG + chr8_4:31570761-31570780 None:intergenic 30.0%
TTTGATGTCATGTTTCAGAT+TGG - chr8_4:31570789-31570808 Msa1323310:intron 30.0%
! TTTTCTTTCAACAGAATCGA+TGG - chr8_4:31570929-31570948 Msa1323310:intron 30.0%
ATTAGATATCACTTCGTTTG+TGG + chr8_4:31570989-31571008 None:intergenic 30.0%
ACAAACGAAGTGATATCTAA+TGG - chr8_4:31570988-31571007 Msa1323310:intron 30.0%
GGAATAAATGGAACAAGAAA+TGG - chr8_4:31571009-31571028 Msa1323310:intron 30.0%
! TAGCAAAACCGTTGTATTTT+CGG - chr8_4:31571169-31571188 Msa1323310:intron 30.0%
TCAAAACACCGAAAATACAA+CGG + chr8_4:31571180-31571199 None:intergenic 30.0%
!! CTTGTTATTAGTGTGTTTGA+TGG - chr8_4:31571466-31571485 Msa1323310:intron 30.0%
ACTAATTGAATAAGCATTCG+AGG + chr8_4:31571662-31571681 None:intergenic 30.0%
AGTAATATGTGGATCAAAAG+AGG - chr8_4:31571739-31571758 Msa1323310:intron 30.0%
TTTAAATAATACTCCCCATG+TGG - chr8_4:31572026-31572045 Msa1323310:intron 30.0%
CAGAAATTCAAGTGATAAGA+GGG + chr8_4:31572091-31572110 None:intergenic 30.0%
ACAGAAATTCAAGTGATAAG+AGG + chr8_4:31572092-31572111 None:intergenic 30.0%
AAATCCAAATCATGCTTGTA+AGG + chr8_4:31572245-31572264 None:intergenic 30.0%
TTTGGATTTAGCATAGTTCA+AGG - chr8_4:31572256-31572275 Msa1323310:intron 30.0%
!! CAAGATTTTTAGGAACAATG+GGG + chr8_4:31572378-31572397 None:intergenic 30.0%
!! GCAAGATTTTTAGGAACAAT+GGG + chr8_4:31572379-31572398 None:intergenic 30.0%
!! AGCAAGATTTTTAGGAACAA+TGG + chr8_4:31572380-31572399 None:intergenic 30.0%
ATAGTTACACAACACTTACA+TGG + chr8_4:31572697-31572716 None:intergenic 30.0%
! GTAAGTGTTGTGTAACTATT+TGG - chr8_4:31572698-31572717 Msa1323310:intron 30.0%
! TGATTTGTAAGTACGACTTA+AGG - chr8_4:31572991-31573010 Msa1323310:intron 30.0%
GATTTGTAAGTACGACTTAA+GGG - chr8_4:31572992-31573011 Msa1323310:intron 30.0%
! ATGTGGATTGAATACAAAGT+TGG - chr8_4:31573016-31573035 Msa1323310:intron 30.0%
GAATACAAAGTTGGAAAAGT+TGG - chr8_4:31573025-31573044 Msa1323310:intron 30.0%
! TATTGCATTGATGAATTTGC+AGG - chr8_4:31573066-31573085 Msa1323310:CDS 30.0%
AGAAAATCAAACAGTCTTTG+AGG + chr8_4:31573726-31573745 None:intergenic 30.0%
GAATGGGATATACTATCAAA+TGG - chr8_4:31573768-31573787 Msa1323310:intron 30.0%
AAAGAAAACTTACACTAGCA+CGG + chr8_4:31573860-31573879 None:intergenic 30.0%
!!! TGTTGTTGTTGTTTTGGTAA+TGG - chr8_4:31574719-31574738 Msa1323310:five_prime_UTR 30.0%
!! TTGGTAATGGATGAAAGAAA+AGG - chr8_4:31574732-31574751 Msa1323310:five_prime_UTR 30.0%
!! TGGTAATGGATGAAAGAAAA+GGG - chr8_4:31574733-31574752 Msa1323310:five_prime_UTR 30.0%
AAGGGTAAAAATGTAATTGG+TGG - chr8_4:31574751-31574770 Msa1323310:five_prime_UTR 30.0%
AGGGTAAAAATGTAATTGGT+GGG - chr8_4:31574752-31574771 Msa1323310:five_prime_UTR 30.0%
AAAATGTAATTGGTGGGATT+TGG - chr8_4:31574758-31574777 Msa1323310:five_prime_UTR 30.0%
AAATGTAATTGGTGGGATTT+GGG - chr8_4:31574759-31574778 Msa1323310:five_prime_UTR 30.0%
! TATCTATCTTATCTAGGGTT+AGG - chr8_4:31574852-31574871 Msa1323310:five_prime_UTR 30.0%
AACATCAATGAAAGGAATAG+TGG - chr8_4:31574944-31574963 Msa1323310:five_prime_UTR 30.0%
CTGAGAAAAACTTGAAAGGT+GGG + chr8_4:31568803-31568822 None:intergenic 35.0%
ACTGAGAAAAACTTGAAAGG+TGG + chr8_4:31568804-31568823 None:intergenic 35.0%
! TACACTGTTTCTCTCTCAAA+AGG - chr8_4:31568826-31568845 Msa1323310:three_prime_UTR 35.0%
! ACACTGTTTCTCTCTCAAAA+GGG - chr8_4:31568827-31568846 Msa1323310:three_prime_UTR 35.0%
AGAGAGATTATGGAGACAAA+GGG + chr8_4:31569011-31569030 None:intergenic 35.0%
GAACAAAGACAGAGAGATTA+TGG + chr8_4:31569021-31569040 None:intergenic 35.0%
! TTGAACTTTTTGGATTTGGG+TGG - chr8_4:31569148-31569167 Msa1323310:CDS 35.0%
!! TGGGGTATTTGATGAGTTTT+GGG - chr8_4:31569204-31569223 Msa1323310:CDS 35.0%
TTTGTAGAGAACAATTCAGG+AGG - chr8_4:31569230-31569249 Msa1323310:CDS 35.0%
AACAACGAAAGAATGCCATT+TGG - chr8_4:31569293-31569312 Msa1323310:CDS 35.0%
!! GTTGAACATTGATTTAGCCA+AGG + chr8_4:31569354-31569373 None:intergenic 35.0%
AAATCAATGTTCAACTCACC+TGG - chr8_4:31569359-31569378 Msa1323310:CDS 35.0%
!!! GACCCTTTTGTTTTGTTTGA+TGG - chr8_4:31569477-31569496 Msa1323310:CDS 35.0%
ATGTGAATGGATCAATGCAT+GGG - chr8_4:31569538-31569557 Msa1323310:intron 35.0%
CATGGGAATTATGAGCAAAA+TGG - chr8_4:31569555-31569574 Msa1323310:intron 35.0%
TTTGAGAAGAAGTAGAGAAG+AGG - chr8_4:31569578-31569597 Msa1323310:intron 35.0%
! TAGATCTGGTAGTGATAACT+TGG - chr8_4:31569608-31569627 Msa1323310:intron 35.0%
AACAGATTCAAGAGCTTGAA+AGG - chr8_4:31569706-31569725 Msa1323310:intron 35.0%
! CCAATCTTTGTTTCTCATCT+GGG + chr8_4:31569832-31569851 None:intergenic 35.0%
! TCCAATCTTTGTTTCTCATC+TGG + chr8_4:31569833-31569852 None:intergenic 35.0%
!! GCTTAGTAAAAGGCTTTGTT+TGG - chr8_4:31569853-31569872 Msa1323310:intron 35.0%
TGTACTAGACTCAATTGGAA+AGG - chr8_4:31570041-31570060 Msa1323310:CDS 35.0%
GAGCTGAGAATATGTCTATA+AGG - chr8_4:31570104-31570123 Msa1323310:CDS 35.0%
!! CCAAGCTCTAAACTTGAATT+TGG + chr8_4:31570298-31570317 None:intergenic 35.0%
! CCAAATTCAAGTTTAGAGCT+TGG - chr8_4:31570295-31570314 Msa1323310:intron 35.0%
GACATTCCTGAACTAAAATC+AGG + chr8_4:31570379-31570398 None:intergenic 35.0%
TCTATTTGAAGGAGACACAA+TGG + chr8_4:31570416-31570435 None:intergenic 35.0%
!!! GACTACTGGTTTTGATAGAT+CGG - chr8_4:31570450-31570469 Msa1323310:intron 35.0%
!! TATGGATGAGTTGGTTAAGA+TGG - chr8_4:31570510-31570529 Msa1323310:CDS 35.0%
CTATACTCCTAATCCAAAGA+GGG + chr8_4:31570549-31570568 None:intergenic 35.0%
TCTATACTCCTAATCCAAAG+AGG + chr8_4:31570550-31570569 None:intergenic 35.0%
! CTTTGGATTAGGAGTATAGA+AGG - chr8_4:31570550-31570569 Msa1323310:CDS 35.0%
! AAGGGAAATTTTGAACCATG+AGG - chr8_4:31570576-31570595 Msa1323310:CDS 35.0%
TGAACCATGAGGAATATTTG+AGG - chr8_4:31570587-31570606 Msa1323310:CDS 35.0%
ATGTCCTCAAATATTCCTCA+TGG + chr8_4:31570594-31570613 None:intergenic 35.0%
TTAGGTTTCAAACCAATGCA+AGG + chr8_4:31570622-31570641 None:intergenic 35.0%
!! TGCATTGGTTTGAAACCTAA+TGG - chr8_4:31570622-31570641 Msa1323310:CDS 35.0%
!!! ACCTAATGGTTTTGTTTCTG+AGG - chr8_4:31570636-31570655 Msa1323310:CDS 35.0%
TACTGTCATCATCAATAGCT+TGG - chr8_4:31570675-31570694 Msa1323310:intron 35.0%
! GGTTGCATCGATAACATTAA+GGG + chr8_4:31570740-31570759 None:intergenic 35.0%
! AGGTTGCATCGATAACATTA+AGG + chr8_4:31570741-31570760 None:intergenic 35.0%
TTAGCACTACGGTAAAAACA+TGG + chr8_4:31571062-31571081 None:intergenic 35.0%
ATCTATAGACACGTCAACAA+CGG + chr8_4:31571320-31571339 None:intergenic 35.0%
!! CTACAAGTTTTGTGAACTGT+AGG - chr8_4:31571362-31571381 Msa1323310:intron 35.0%
ATTACCTTGGAGTAACCATT+TGG + chr8_4:31571421-31571440 None:intergenic 35.0%
TTAGTTTCCACATCTTCTTG+TGG - chr8_4:31571517-31571536 Msa1323310:intron 35.0%
GAAGTTCAGAACACAATGTA+TGG + chr8_4:31571567-31571586 None:intergenic 35.0%
TTAGTCAGATCACACATTTG+CGG - chr8_4:31571677-31571696 Msa1323310:intron 35.0%
TTCAAGTGAAGCAAAACACA+AGG - chr8_4:31571773-31571792 Msa1323310:intron 35.0%
ATCTATACTTTAGGCCACAT+GGG + chr8_4:31572043-31572062 None:intergenic 35.0%
AATCTATACTTTAGGCCACA+TGG + chr8_4:31572044-31572063 None:intergenic 35.0%
AGTTCCTTACAAGCATGATT+TGG - chr8_4:31572238-31572257 Msa1323310:intron 35.0%
GAGTCAAACATATAAGAGAC+TGG - chr8_4:31572304-31572323 Msa1323310:intron 35.0%
TTGAGATTTGCAAATCTCAC+AGG + chr8_4:31572345-31572364 None:intergenic 35.0%
ATACCTCTTGTCCTTTCTAT+TGG - chr8_4:31572444-31572463 Msa1323310:CDS 35.0%
ATTCCAATAGAAAGGACAAG+AGG + chr8_4:31572450-31572469 None:intergenic 35.0%
! GATTGGTCATTCCAATAGAA+AGG + chr8_4:31572458-31572477 None:intergenic 35.0%
!! TTATGTGTAGCAAAGGTGTT+GGG + chr8_4:31573288-31573307 None:intergenic 35.0%
! TTTATGTGTAGCAAAGGTGT+TGG + chr8_4:31573289-31573308 None:intergenic 35.0%
! GGTTAAGTTTGTTCCATTTG+TGG + chr8_4:31573590-31573609 None:intergenic 35.0%
AAATGGAACAAACTTAACCC+TGG - chr8_4:31573591-31573610 Msa1323310:CDS 35.0%
TAATGTAGACGAAGATGTGA+GGG - chr8_4:31573614-31573633 Msa1323310:CDS 35.0%
ATAGTATATCCCATTCGCTA+CGG + chr8_4:31573764-31573783 None:intergenic 35.0%
TGGGATATACTATCAAATGG+TGG - chr8_4:31573771-31573790 Msa1323310:intron 35.0%
ATTGCTAAAGGACAAGATCA+TGG - chr8_4:31573816-31573835 Msa1323310:intron 35.0%
GTGACAACGTTATAACTATG+TGG - chr8_4:31574041-31574060 Msa1323310:CDS 35.0%
TCAACGTTGAAATGTGAATG+TGG - chr8_4:31574093-31574112 Msa1323310:CDS 35.0%
! ATGTGGCTTTCTTTGTTTGT+CGG - chr8_4:31574110-31574129 Msa1323310:CDS 35.0%
AATGTAATTGGTGGGATTTG+GGG - chr8_4:31574760-31574779 Msa1323310:five_prime_UTR 35.0%
! CCTTTTTCTTTTTCCATGAG+TGG + chr8_4:31574807-31574826 None:intergenic 35.0%
CCACTCATGGAAAAAGAAAA+AGG - chr8_4:31574804-31574823 Msa1323310:five_prime_UTR 35.0%
AAAGAAAAAGGTTCCTTGCA+TGG - chr8_4:31574816-31574835 Msa1323310:five_prime_UTR 35.0%
CAGAGAGATTATGGAGACAA+AGG + chr8_4:31569012-31569031 None:intergenic 40.0%
!! GTGGGGTATTTGATGAGTTT+TGG - chr8_4:31569203-31569222 Msa1323310:CDS 40.0%
!! GGGGTATTTGATGAGTTTTG+GGG - chr8_4:31569205-31569224 Msa1323310:CDS 40.0%
!! GGGTATTTGATGAGTTTTGG+GGG - chr8_4:31569206-31569225 Msa1323310:CDS 40.0%
!!! GGTATTTGATGAGTTTTGGG+GGG - chr8_4:31569207-31569226 Msa1323310:CDS 40.0%
GGGTTTGTAGAGAACAATTC+AGG - chr8_4:31569227-31569246 Msa1323310:CDS 40.0%
GGTTGAGAGAAAGAACCAAA+TGG + chr8_4:31569311-31569330 None:intergenic 40.0%
!! AACATTGATTTAGCCAAGGC+TGG + chr8_4:31569350-31569369 None:intergenic 40.0%
ACAAGTGCAAGTGATAATCC+AGG + chr8_4:31569380-31569399 None:intergenic 40.0%
GATGGACAAGAAGATGTGAA+TGG - chr8_4:31569525-31569544 Msa1323310:intron 40.0%
GATGTGAATGGATCAATGCA+TGG - chr8_4:31569537-31569556 Msa1323310:intron 40.0%
GAAGAGGAACAAAGTAGATC+TGG - chr8_4:31569594-31569613 Msa1323310:intron 40.0%
! TCTGGTAGTGATAACTTGGA+TGG - chr8_4:31569612-31569631 Msa1323310:intron 40.0%
GATAACTTGGATGGTGTTTC+TGG - chr8_4:31569621-31569640 Msa1323310:intron 40.0%
ATGCTGATGATAAACCACCT+AGG - chr8_4:31569655-31569674 Msa1323310:intron 40.0%
TGATATCTCTTCTTCCTAGG+TGG + chr8_4:31569672-31569691 None:intergenic 40.0%
TCAAGCTCTTGAATCTGTTG+AGG + chr8_4:31569705-31569724 None:intergenic 40.0%
CCCAGATGAGAAACAAAGAT+TGG - chr8_4:31569829-31569848 Msa1323310:intron 40.0%
! GGCATGAGAACAATTTGCTT+AGG - chr8_4:31570062-31570081 Msa1323310:CDS 40.0%
TGTCTATAAGGGATGCAATG+AGG - chr8_4:31570116-31570135 Msa1323310:CDS 40.0%
ATCTTCGAATTGAGAATGCG+AGG - chr8_4:31570203-31570222 Msa1323310:CDS 40.0%
AATTGAGAATGCGAGGTTGA+AGG - chr8_4:31570210-31570229 Msa1323310:CDS 40.0%
!! TTGGTAACGAAGAAATCGGA+CGG + chr8_4:31570279-31570298 None:intergenic 40.0%
!! TCAAGTTTAGAGCTTGGTGT+TGG - chr8_4:31570301-31570320 Msa1323310:intron 40.0%
GTTGGAGGAAACAACAACAA+TGG - chr8_4:31570319-31570338 Msa1323310:intron 40.0%
AAGGAGACACAATGGCTAAA+GGG + chr8_4:31570408-31570427 None:intergenic 40.0%
CAAACATCTATGGTGACTAC+TGG - chr8_4:31570436-31570455 Msa1323310:intron 40.0%
!! GTTTTGATAGATCGGTCGAA+AGG - chr8_4:31570458-31570477 Msa1323310:intron 40.0%
CACAAACTAATGACCCTCTT+TGG - chr8_4:31570533-31570552 Msa1323310:CDS 40.0%
CTAATGACCCTCTTTGGATT+AGG - chr8_4:31570539-31570558 Msa1323310:CDS 40.0%
! TGGATTAGGAGTATAGAAGG+AGG - chr8_4:31570553-31570572 Msa1323310:CDS 40.0%
! TTAGGAGTATAGAAGGAGGA+AGG - chr8_4:31570557-31570576 Msa1323310:CDS 40.0%
! TAGGAGTATAGAAGGAGGAA+GGG - chr8_4:31570558-31570577 Msa1323310:CDS 40.0%
GCCTCAGAAACAAAACCATT+AGG + chr8_4:31570640-31570659 None:intergenic 40.0%
!!! TTTTGTTTCTGAGGCCTCAA+GGG - chr8_4:31570645-31570664 Msa1323310:CDS 40.0%
TATCGATGCAACCTCAATTG+TGG - chr8_4:31570747-31570766 Msa1323310:intron 40.0%
GAGGTTCTTGCAATGATACA+AGG + chr8_4:31570967-31570986 None:intergenic 40.0%
AGATATCACTTCGTTTGTGG+AGG + chr8_4:31570986-31571005 None:intergenic 40.0%
AATGCCAGTGTTGTCAATCA+CGG + chr8_4:31571135-31571154 None:intergenic 40.0%
TTCGCGAGGTAAATTTCCTT+AGG - chr8_4:31571263-31571282 Msa1323310:intron 40.0%
GATACCATCAGAGAAACTTC+TGG - chr8_4:31571337-31571356 Msa1323310:intron 40.0%
GTTGTGCAAGATATGCCAAA+TGG - chr8_4:31571403-31571422 Msa1323310:intron 40.0%
TATGCCAAATGGTTACTCCA+AGG - chr8_4:31571414-31571433 Msa1323310:intron 40.0%
TTACTGTCCACAAGAAGATG+TGG + chr8_4:31571527-31571546 None:intergenic 40.0%
GTTCAGAACACAATGTATGG+AGG + chr8_4:31571564-31571583 None:intergenic 40.0%
TGAAGCAAAACACAAGGTCA+AGG - chr8_4:31571779-31571798 Msa1323310:intron 40.0%
AACACAAGGTCAAGGAATCA+AGG - chr8_4:31571787-31571806 Msa1323310:intron 40.0%
ACACAAGGTCAAGGAATCAA+GGG - chr8_4:31571788-31571807 Msa1323310:intron 40.0%
GAATTGTATTGCACCTGAGA+AGG - chr8_4:31571949-31571968 Msa1323310:intron 40.0%
!! TTATGAGAAGCATCCTTCTC+AGG + chr8_4:31571965-31571984 None:intergenic 40.0%
TCTATACTTTAGGCCACATG+GGG + chr8_4:31572042-31572061 None:intergenic 40.0%
!! AAAGGACAAGAGGTATCTCA+TGG + chr8_4:31572440-31572459 None:intergenic 40.0%
AAAAGTTGGCATGCCAAACA+TGG - chr8_4:31573039-31573058 Msa1323310:intron 40.0%
TGATGAATTTGCAGGTGACA+TGG - chr8_4:31573074-31573093 Msa1323310:CDS 40.0%
GATGAATTTGCAGGTGACAT+GGG - chr8_4:31573075-31573094 Msa1323310:CDS 40.0%
GGTGGAACATACAGAATATG+AGG - chr8_4:31573096-31573115 Msa1323310:CDS 40.0%
CAGAGGACATTAATATGGCA+AGG + chr8_4:31573219-31573238 None:intergenic 40.0%
GAGTTAGAGTAATACCAGAG+TGG + chr8_4:31573258-31573277 None:intergenic 40.0%
ATGACAAACAACTTCTGTGC+AGG - chr8_4:31573546-31573565 Msa1323310:CDS 40.0%
TGACAAACAACTTCTGTGCA+GGG - chr8_4:31573547-31573566 Msa1323310:CDS 40.0%
CATCTTCGTCTACATTACCA+GGG + chr8_4:31573611-31573630 None:intergenic 40.0%
ACATCTTCGTCTACATTACC+AGG + chr8_4:31573612-31573631 None:intergenic 40.0%
GTAATGTAGACGAAGATGTG+AGG - chr8_4:31573613-31573632 Msa1323310:CDS 40.0%
! TTGATTTTCTGCGTGACGAA+AGG - chr8_4:31573736-31573755 Msa1323310:intron 40.0%
ATATGAGCCATCTCTTGCAT+AGG + chr8_4:31573798-31573817 None:intergenic 40.0%
GAGATGGCTCATATTGCTAA+AGG - chr8_4:31573804-31573823 Msa1323310:intron 40.0%
TTGTTTGTCGGTAGTGTCTT+TGG - chr8_4:31574122-31574141 Msa1323310:CDS 40.0%
TATCAACATGCTACTCTGGT+TGG + chr8_4:31574279-31574298 None:intergenic 40.0%
GTAGTATCAACATGCTACTC+TGG + chr8_4:31574283-31574302 None:intergenic 40.0%
AGAAACATGCATAGACGAAG+CGG - chr8_4:31574304-31574323 Msa1323310:intron 40.0%
TTCATGACAACATGCATAGC+TGG + chr8_4:31574362-31574381 None:intergenic 40.0%
GCTATGCATGTTGTCATGAA+CGG - chr8_4:31574362-31574381 Msa1323310:intron 40.0%
TTGAAACGCCACGGTTAAAA+GGG + chr8_4:31574516-31574535 None:intergenic 40.0%
! TTTGAAACGCCACGGTTAAA+AGG + chr8_4:31574517-31574536 None:intergenic 40.0%
CTGTAGGAAGACTATTCACA+AGG + chr8_4:31574541-31574560 None:intergenic 40.0%
!!! CAGAGAGAGTTTTGAGACAC+TGG - chr8_4:31568971-31568990 Msa1323310:three_prime_UTR 45.0%
GTAGAGAACAATTCAGGAGG+TGG - chr8_4:31569233-31569252 Msa1323310:CDS 45.0%
! GGTGGAGGTGTAAGAAACAT+AGG - chr8_4:31569257-31569276 Msa1323310:CDS 45.0%
! TCTTGTTACTTCTCCAGCCT+TGG - chr8_4:31569334-31569353 Msa1323310:CDS 45.0%
CGGTGATATCTCTTCTTCCT+AGG + chr8_4:31569675-31569694 None:intergenic 45.0%
! GAATCTGTTGAGGAGTGTGT+CGG + chr8_4:31569695-31569714 None:intergenic 45.0%
! CTTTGTTTCTCATCTGGGTG+AGG + chr8_4:31569827-31569846 None:intergenic 45.0%
CCACCGCAATTCGAACAAAT+AGG + chr8_4:31570145-31570164 None:intergenic 45.0%
CCTATTTGTTCGAATTGCGG+TGG - chr8_4:31570142-31570161 Msa1323310:CDS 45.0%
GATAGAGTTTGTGCACTTGC+TGG - chr8_4:31570241-31570260 Msa1323310:CDS 45.0%
! GCACTTGCTGGAAAGTTTCT+AGG - chr8_4:31570253-31570272 Msa1323310:intron 45.0%
!! AGTTTAGAGCTTGGTGTTGG+AGG - chr8_4:31570304-31570323 Msa1323310:intron 45.0%
GAAGGAGACACAATGGCTAA+AGG + chr8_4:31570409-31570428 None:intergenic 45.0%
! TGAACTTGCTTTGGCTGCTA+TGG - chr8_4:31570492-31570511 Msa1323310:intron 45.0%
TTTGGCTGCTATGGATGAGT+TGG - chr8_4:31570501-31570520 Msa1323310:intron 45.0%
AGGACATTCACTCCTTGCAT+TGG - chr8_4:31570607-31570626 Msa1323310:CDS 45.0%
!!! GTTTTGTTTCTGAGGCCTCA+AGG - chr8_4:31570644-31570663 Msa1323310:CDS 45.0%
ACTTCATGTGCTATCGCCTT+TGG - chr8_4:31571234-31571253 Msa1323310:intron 45.0%
AGGAAATTTACCTCGCGAAC+TGG + chr8_4:31571262-31571281 None:intergenic 45.0%
! CATGCTGCTTGCAAAACCTA+AGG + chr8_4:31571282-31571301 None:intergenic 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG - chr8_4:31571286-31571305 Msa1323310:intron 45.0%
AGCTCCAGAAGTTTCTCTGA+TGG + chr8_4:31571344-31571363 None:intergenic 45.0%
TCTTGCACAACACAACCAGA+GGG + chr8_4:31571394-31571413 None:intergenic 45.0%
ATCTTGCACAACACAACCAG+AGG + chr8_4:31571395-31571414 None:intergenic 45.0%
CACAAGGTCAAGGAATCAAG+GGG - chr8_4:31571789-31571808 Msa1323310:intron 45.0%
! AAGTACGACTTAAGGGCATG+TGG - chr8_4:31572999-31573018 Msa1323310:intron 45.0%
TCAACAGAGGTCTATACAGC+TGG + chr8_4:31573135-31573154 None:intergenic 45.0%
TATAGACCTCTGTTGAGCTC+AGG - chr8_4:31573139-31573158 Msa1323310:CDS 45.0%
AGCGGCAGAGGACATTAATA+TGG + chr8_4:31573224-31573243 None:intergenic 45.0%
ATACCAGAGTGGTCTCTAGA+GGG + chr8_4:31573247-31573266 None:intergenic 45.0%
AATACCAGAGTGGTCTCTAG+AGG + chr8_4:31573248-31573267 None:intergenic 45.0%
TGTCTCACAGCAATAACAGC+AGG - chr8_4:31573489-31573508 Msa1323310:CDS 45.0%
GACAAACAACTTCTGTGCAG+GGG - chr8_4:31573548-31573567 Msa1323310:CDS 45.0%
!! AACAGTCTTTGAGGCGAAAC+CGG + chr8_4:31573717-31573736 None:intergenic 45.0%
GAAACATGCATAGACGAAGC+GGG - chr8_4:31574305-31574324 Msa1323310:intron 45.0%
AAACATGCATAGACGAAGCG+GGG - chr8_4:31574306-31574325 Msa1323310:intron 45.0%
ATGCATGTTGTCATGAACGG+TGG - chr8_4:31574365-31574384 Msa1323310:intron 45.0%
TACGTGGCATTACTACCATC+CGG - chr8_4:31574398-31574417 Msa1323310:CDS 45.0%
! CACAAGGATTTGAAACGCCA+CGG + chr8_4:31574525-31574544 None:intergenic 45.0%
! CACTGTTTCAACTGACTCCA+CGG + chr8_4:31574573-31574592 None:intergenic 45.0%
AAGCTGAGTCGTGACATAAG+TGG - chr8_4:31574646-31574665 Msa1323310:five_prime_UTR 45.0%
AGTCAAGAACGAACCACTCA+TGG - chr8_4:31574791-31574810 Msa1323310:five_prime_UTR 45.0%
GAAAAAGGTTCCTTGCATGG+TGG - chr8_4:31574819-31574838 Msa1323310:five_prime_UTR 45.0%
GATATCCTTACCACCATGCA+AGG + chr8_4:31574832-31574851 None:intergenic 45.0%
GGGTTAGGTTCCTTAACACA+AGG - chr8_4:31574867-31574886 Msa1323310:five_prime_UTR 45.0%
AGGTTCCTTAACACAAGGCA+AGG - chr8_4:31574872-31574891 Msa1323310:five_prime_UTR 45.0%
ACGATCCTTGCCTTGTGTTA+AGG + chr8_4:31574880-31574899 None:intergenic 45.0%
TTAACACAAGGCAAGGATCG+TGG - chr8_4:31574879-31574898 Msa1323310:five_prime_UTR 45.0%
GAGAACAATTCAGGAGGTGG+TGG - chr8_4:31569236-31569255 Msa1323310:CDS 50.0%
! AACAATTCAGGAGGTGGTGG+TGG - chr8_4:31569239-31569258 Msa1323310:CDS 50.0%
GCTGGAGAAGTAACAAGACG+AGG + chr8_4:31569332-31569351 None:intergenic 50.0%
GAAATCTCGCCGATCATAGC+TGG + chr8_4:31570169-31570188 None:intergenic 50.0%
GACAGTACCAGTTTCCCTTG+AGG + chr8_4:31570662-31570681 None:intergenic 50.0%
GTCCATAAGAGTCTCGACGA+GGG + chr8_4:31570701-31570720 None:intergenic 50.0%
AGTCCATAAGAGTCTCGACG+AGG + chr8_4:31570702-31570721 None:intergenic 50.0%
CGTCGAGACTCTTATGGACT+CGG - chr8_4:31570702-31570721 Msa1323310:intron 50.0%
CGATCCGTGATTGACAACAC+TGG - chr8_4:31571128-31571147 Msa1323310:intron 50.0%
!! AGCAGCATGCAGAAGGTGTT+TGG - chr8_4:31571293-31571312 Msa1323310:intron 50.0%
!! GCAGCATGCAGAAGGTGTTT+GGG - chr8_4:31571294-31571313 Msa1323310:intron 50.0%
AACTGTAGGAAGCTTCCCTC+TGG - chr8_4:31571376-31571395 Msa1323310:intron 50.0%
GAATTTGCAGGTGACATGGG+TGG - chr8_4:31573078-31573097 Msa1323310:CDS 50.0%
ACAGAGGTCTATACAGCTGG+TGG + chr8_4:31573132-31573151 None:intergenic 50.0%
ACCTCTGTTGAGCTCAGGTA+TGG - chr8_4:31573144-31573163 Msa1323310:CDS 50.0%
CCTCTGTTGAGCTCAGGTAT+GGG - chr8_4:31573145-31573164 Msa1323310:CDS 50.0%
CTCTGTTGAGCTCAGGTATG+GGG - chr8_4:31573146-31573165 Msa1323310:CDS 50.0%
TTGAGCTCAGGTATGGGGTT+TGG - chr8_4:31573151-31573170 Msa1323310:CDS 50.0%
!! TGTAGCAAAGGTGTTGGGAG+TGG + chr8_4:31573283-31573302 None:intergenic 50.0%
CTCACAGCAATAACAGCAGG+AGG - chr8_4:31573492-31573511 Msa1323310:CDS 50.0%
CAGCAATAACAGCAGGAGGA+AGG - chr8_4:31573496-31573515 Msa1323310:CDS 50.0%
!! CGAAAGAGTGTCGATGATCC+AGG - chr8_4:31573645-31573664 Msa1323310:CDS 50.0%
!! ACAGTCTTTGAGGCGAAACC+GGG + chr8_4:31573716-31573735 None:intergenic 50.0%
TGGTGGTCCTATGCAAGAGA+TGG - chr8_4:31573788-31573807 Msa1323310:intron 50.0%
!! GTCGCTTGTTGTCTATGCAC+CGG - chr8_4:31574328-31574347 Msa1323310:intron 50.0%
TGCATAGCTGGAATGTCGAC+CGG + chr8_4:31574350-31574369 None:intergenic 50.0%
AATGGCGATGCAACCGCAAA+TGG - chr8_4:31574464-31574483 Msa1323310:CDS 50.0%
TCCTACAGCAAAACTCACCG+TGG - chr8_4:31574553-31574572 Msa1323310:five_prime_UTR 50.0%
!! TCCACGGTGAGTTTTGCTGT+AGG + chr8_4:31574557-31574576 None:intergenic 50.0%
AGGTTCCTTGCATGGTGGTA+AGG - chr8_4:31574824-31574843 Msa1323310:five_prime_UTR 50.0%
ACAAGGCAAGGATCGTGGTT+CGG - chr8_4:31574884-31574903 Msa1323310:five_prime_UTR 50.0%
!! AATTCAGGAGGTGGTGGTGG+AGG - chr8_4:31569242-31569261 Msa1323310:CDS 55.0%
TGCGGTGGTCCAGCTATGAT+CGG - chr8_4:31570157-31570176 Msa1323310:CDS 55.0%
GATCGGCGAGATTTCACTCG+AGG - chr8_4:31570174-31570193 Msa1323310:CDS 55.0%
! TCTGAGGCCTCAAGGGAAAC+TGG - chr8_4:31570652-31570671 Msa1323310:CDS 55.0%
ACCTCGCGAACTGGAACCAA+AGG + chr8_4:31571253-31571272 None:intergenic 55.0%
CCCATACCTGAGCTCAACAG+AGG + chr8_4:31573148-31573167 None:intergenic 55.0%
! ATATGGCAAGGCACTCGCAC+TGG + chr8_4:31573207-31573226 None:intergenic 55.0%
! AGAGTGGTCTCTAGAGGGAG+CGG + chr8_4:31573242-31573261 None:intergenic 55.0%
GTTCCATTTGTGGACCGTCG+AGG + chr8_4:31573580-31573599 None:intergenic 55.0%
ACGAAAGGCTCCGTAGCGAA+TGG - chr8_4:31573751-31573770 Msa1323310:intron 55.0%
CGAAAGGCTCCGTAGCGAAT+GGG - chr8_4:31573752-31573771 Msa1323310:intron 55.0%
TTCTCTAGTCCACGTGACCC+AGG + chr8_4:31574446-31574465 None:intergenic 55.0%
!! GGGTCACGTGGACTAGAGAA+TGG - chr8_4:31574446-31574465 Msa1323310:CDS 55.0%
GATGCAACCGCAAATGGAGG+CGG - chr8_4:31574470-31574489 Msa1323310:CDS 55.0%
!! TAGCGGGTCCCTTTTAACCG+TGG - chr8_4:31574505-31574524 Msa1323310:CDS 55.0%
CAAGGCAAGGATCGTGGTTC+GGG - chr8_4:31574885-31574904 Msa1323310:five_prime_UTR 55.0%
GGCCCTCGTCGAGACTCTTA+TGG - chr8_4:31570696-31570715 Msa1323310:intron 60.0%
! GCCTTTGGTTCCAGTTCGCG+AGG - chr8_4:31571249-31571268 Msa1323310:intron 60.0%
!! TGGGGTTTGGTGCGTCTCGT+TGG - chr8_4:31573164-31573183 Msa1323310:CDS 60.0%
!! GGGGTTTGGTGCGTCTCGTT+GGG - chr8_4:31573165-31573184 Msa1323310:CDS 60.0%
! GCACTCGCACTGGCGTTGTA+AGG + chr8_4:31573197-31573216 None:intergenic 60.0%
! GCTCCCTCTAGAGACCACTC+TGG - chr8_4:31573241-31573260 Msa1323310:CDS 60.0%
GTGCCTCGACGGTCCACAAA+TGG - chr8_4:31573574-31573593 Msa1323310:CDS 60.0%
ATGATCCAGGCGAGCCACCA+GGG - chr8_4:31573658-31573677 Msa1323310:CDS 60.0%
CGGTGGCGATTCAGCTTACG+TGG - chr8_4:31574382-31574401 Msa1323310:CDS 60.0%
GGCGATGCAACCGCAAATGG+AGG - chr8_4:31574467-31574486 Msa1323310:CDS 60.0%
! GTCTCTAGAGGGAGCGGCAG+AGG + chr8_4:31573236-31573255 None:intergenic 65.0%
TGCAGGGGTCTGTGCCTCGA+CGG - chr8_4:31573563-31573582 Msa1323310:CDS 65.0%
GATGATCCAGGCGAGCCACC+AGG - chr8_4:31573657-31573676 Msa1323310:CDS 65.0%
GCGCTCAACACGATCCCTGG+TGG + chr8_4:31573675-31573694 None:intergenic 65.0%
GCTGCGCTCAACACGATCCC+TGG + chr8_4:31573678-31573697 None:intergenic 65.0%
CGTGTTGAGCGCAGCCACGT+CGG - chr8_4:31573683-31573702 Msa1323310:CDS 65.0%
GTCAGGGACGATGGCGAAGC+CGG + chr8_4:31574420-31574439 None:intergenic 65.0%
GGCTTCGCCATCGTCCCTGA+CGG - chr8_4:31574419-31574438 Msa1323310:CDS 65.0%
CCATCGTCCCTGACGGTCCT+GGG - chr8_4:31574426-31574445 Msa1323310:CDS 65.0%
CACGTGACCCAGGACCGTCA+GGG + chr8_4:31574436-31574455 None:intergenic 65.0%
AACCGCAAATGGAGGCGGCG+AGG - chr8_4:31574475-31574494 Msa1323310:CDS 65.0%
ACGATCCCTGGTGGCTCGCC+TGG + chr8_4:31573666-31573685 None:intergenic 70.0%
TGAGCGCAGCCACGTCGGTG+TGG - chr8_4:31573688-31573707 Msa1323310:CDS 70.0%
AGCCACGTCGGTGTGGCTCC+CGG - chr8_4:31573695-31573714 Msa1323310:CDS 70.0%
AACCGGGAGCCACACCGACG+TGG + chr8_4:31573700-31573719 None:intergenic 70.0%
GGGACGATGGCGAAGCCGGA+TGG + chr8_4:31574416-31574435 None:intergenic 70.0%
GCCATCGTCCCTGACGGTCC+TGG - chr8_4:31574425-31574444 Msa1323310:CDS 70.0%
CCCAGGACCGTCAGGGACGA+TGG + chr8_4:31574429-31574448 None:intergenic 70.0%
CCACGTGACCCAGGACCGTC+AGG + chr8_4:31574437-31574456 None:intergenic 70.0%
CCTGACGGTCCTGGGTCACG+TGG - chr8_4:31574434-31574453 Msa1323310:CDS 70.0%
CGCCTCGCCGCCTCCATTTG+CGG + chr8_4:31574480-31574499 None:intergenic 70.0%
GGCGGCGAGGCGCGTGTTAG+CGG - chr8_4:31574488-31574507 Msa1323310:CDS 75.0%
GCGGCGAGGCGCGTGTTAGC+GGG - chr8_4:31574489-31574508 Msa1323310:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 31568791 31574975 31568791 ID=Msa1323310;Name=Msa1323310
chr8_4 mRNA 31568791 31574975 31568791 ID=Msa1323310-mRNA-1;Parent=Msa1323310;Name=Msa1323310-mRNA-1;_AED=0.05;_eAED=0.05;_QI=424|1|1|1|1|1|9|323|811
chr8_4 exon 31568791 31569500 31568791 ID=Msa1323310-mRNA-1:exon:10258;Parent=Msa1323310-mRNA-1
chr8_4 exon 31569900 31570267 31569900 ID=Msa1323310-mRNA-1:exon:10257;Parent=Msa1323310-mRNA-1
chr8_4 exon 31570504 31570678 31570504 ID=Msa1323310-mRNA-1:exon:10256;Parent=Msa1323310-mRNA-1
chr8_4 exon 31572331 31572543 31572331 ID=Msa1323310-mRNA-1:exon:10255;Parent=Msa1323310-mRNA-1
chr8_4 exon 31572722 31572823 31572722 ID=Msa1323310-mRNA-1:exon:10254;Parent=Msa1323310-mRNA-1
chr8_4 exon 31573043 31573717 31573043 ID=Msa1323310-mRNA-1:exon:10253;Parent=Msa1323310-mRNA-1
chr8_4 exon 31573841 31573958 31573841 ID=Msa1323310-mRNA-1:exon:10252;Parent=Msa1323310-mRNA-1
chr8_4 exon 31574039 31574253 31574039 ID=Msa1323310-mRNA-1:exon:10251;Parent=Msa1323310-mRNA-1
chr8_4 exon 31574369 31574975 31574369 ID=Msa1323310-mRNA-1:exon:10250;Parent=Msa1323310-mRNA-1
chr8_4 five_prime_UTR 31574552 31574975 31574552 ID=Msa1323310-mRNA-1:five_prime_utr;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31574369 31574551 31574369 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31574039 31574253 31574039 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31573841 31573958 31573841 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31573043 31573717 31573043 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31572722 31572823 31572722 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31572331 31572543 31572331 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31570504 31570678 31570504 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31569900 31570267 31569900 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 CDS 31569114 31569500 31569114 ID=Msa1323310-mRNA-1:cds;Parent=Msa1323310-mRNA-1
chr8_4 three_prime_UTR 31568791 31569113 31568791 ID=Msa1323310-mRNA-1:three_prime_utr;Parent=Msa1323310-mRNA-1
Gene Sequence

>Msa1323310

ATGAGTTTTGGGGGGTTTGTAGAGAACAATTCAGGAGGTGGTGGTGGAGGTGTAAGAAACATAGGAGAAATCTCTTACAACAACGAAAGAATGCCATTTGGTTCTTTCTCTCAACCTCGTCTTGTTACTTCTCCAGCCTTGGCTAAATCAATGTTCAACTCACCTGGATTATCACTTGCACTTCAAACAAATATTGATGGACAAGAAGATGTGAATGGATCAATGCATGGGAATTATGAGCAAAATGGTTTGAGAAGAAGTAGAGAAGAGGAACAAAGTAGATCTGGTAGTGATAACTTGGATGGTGTTTCTGGTGATGAACAAGATGCTGATGATAAACCACCTAGGAAGAAGAGATATCACCGACACACTCCTCAACAGATTCAAGAGCTTGAAAGTTTGTTTAAGGAGTGTCCTCACCCAGATGAGAAACAAAGATTGGAGCTTAGTAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACTCAATTGGAAAGGCATGAGAACAATTTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAATATGTCTATAAGGGATGCAATGAGGAATCCTATTTGTTCGAATTGCGGTGGTCCAGCTATGATCGGCGAGATTTCACTCGAGGAACAACATCTTCGAATTGAGAATGCGAGGTTGAAGGACGAGCTAGATAGAGTTTGTGCACTTGCTGGAAAGTTTCTAGGCCGTCCGATTTCTTCGTTACCAAATTCAAGTTTAGAGCTTGGTGTTGGAGGAAACAACAACAATGGTTTTAATGTGATGAATAATGTGCCTTCAACATTACCTGATTTTAGTTCAGGAATGTCTAATAACCCTTTAGCCATTGTGTCTCCTTCAAATAGACAAACATCTATGGTGACTACTGGTTTTGATAGATCGGTCGAAAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCTATGGATGAGTTGGTTAAGATGGCACAAACTAATGACCCTCTTTGGATTAGGAGTATAGAAGGAGGAAGGGAAATTTTGAACCATGAGGAATATTTGAGGACATTCACTCCTTGCATTGGTTTGAAACCTAATGGTTTTGTTTCTGAGGCCTCAAGGGAAACTGGTACTGTCATCATCAATAGCTTGGCCCTCGTCGAGACTCTTATGGACTCGAATCGATGGATAGAGATGTTTCCTTGTATCATTGCAAGAACCTCCACAAACGAAGTGATATCTAATGGAATAAATGGAACAAGAAATGGTGCACTTCAACTAATGCAAGCTGAACTTCATGTGCTATCGCCTTTGGTTCCAGTTCGCGAGGTAAATTTCCTTAGGTTTTGCAAGCAGCATGCAGAAGGTGTTTGGGCCGTTGTTGACGTGTCTATAGATACCATCAGAGAAACTTCTGGAGCTACAAGTTTTGTGAACTGTAGGAAGCTTCCCTCTGGTTGTGTTGTGCAAGATATGCCAAATGGTTACTCCAAGGTGACATGGGTGGAACATACAGAATATGAGGAAAATCAAGTCCACCAGCTGTATAGACCTCTGTTGAGCTCAGGTATGGGGTTTGGTGCGTCTCGTTGGGTCGCTACCTTACAACGCCAGTGCGAGTGCCTTGCCATATTAATGTCCTCTGCCGCTCCCTCTAGAGACCACTCTGCAATAACAGCAGGAGGAAGGCGAAGCATGCTGAAGCTAGCACAGCGAATGACAAACAACTTCTGTGCAGGGGTCTGTGCCTCGACGGTCCACAAATGGAACAAACTTAACCCTGGTAATGTAGACGAAGATGTGAGGGTGATGACACGAAAGAGTGTCGATGATCCAGGCGAGCCACCAGGGATCGTGTTGAGCGCAGCCACGTCGGTGTGGCTCCCGGTTTCGCCTCAAAGACTGTTTGATTTTCTGCGTGACGAAAGGCTCCGTAGCGAATGGGATATACTATCAAATGGTGGTCCTATGCAAGAGATGGCTCATATTGCTAAAGGACAAGATCATGGCAACTGTGTTTCTCTTCTCCGTGCTAGTGCAATGAATTCCAACCAGAGTAGCATGTTGATACTACAAGAAACATGCATAGACGAAGCGGGGTCGCTTGTTGTCTATGCACCGGTCGACATTCCAGCTATGCATGTTGTCATGAACGGTGGCGATTCAGCTTACGTGGCATTACTACCATCCGGCTTCGCCATCGTCCCTGACGGTCCTGGGTCACGTGGACTAGAGAATGGCGATGCAACCGCAAATGGAGGCGGCGAGGCGCGTGTTAGCGGGTCCCTTTTAACCGTGGCGTTTCAAATCCTTGTGAATAGTCTTCCTACAGCAAAACTCACCGTGGAGTCAGTTGAAACAGTGAACAATCTCATTTCATGCACTGTTCAGAAAATCAAAGCAGCACTTCAATGTGAAAGCTGA
Protein sequence

>Msa1323310

MSFGGFVENNSGGGGGGVRNIGEISYNNERMPFGSFSQPRLVTSPALAKSMFNSPGLSLALQTNIDGQEDVNGSMHGNYEQNGLRRSREEEQSRSGSDNLDGVSGDEQDADDKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENNLLRQENDKLRAENMSIRDAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNNNNGFNVMNNVPSTLPDFSSGMSNNPLAIVSPSNRQTSMVTTGFDRSVERSMFLELALAAMDELVKMAQTNDPLWIRSIEGGREILNHEEYLRTFTPCIGLKPNGFVSEASRETGTVIINSLALVETLMDSNRWIEMFPCIIARTSTNEVISNGINGTRNGALQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGATSFVNCRKLPSGCVVQDMPNGYSKVTWVEHTEYEENQVHQLYRPLLSSGMGFGASRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGLENGDATANGGGEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES*