Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284240 | XP_013445312.1 | 92.398 | 513 | 30 | 3 | 1 | 513 | 8 | 511 | 0.0 | 971 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284240 | sp|Q9SAL0|RGLG4_ARATH | 63.830 | 47 | 17 | 0 | 465 | 511 | 354 | 400 | 5.32e-14 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284240 | A0A072TR76 | 92.398 | 513 | 30 | 3 | 1 | 513 | 8 | 511 | 0.0 | 971 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070120 | Msa1284240 | 0.803592 | 3.239392e-49 | -8.615850e-47 |
| Msa0745730 | Msa1284240 | 0.808149 | 3.569211e-50 | -8.615850e-47 |
| Msa1280960 | Msa1284240 | 0.828710 | 7.727365e-55 | -8.615850e-47 |
| Msa1284240 | Msa1455200 | 0.801820 | 7.516327e-49 | -8.615850e-47 |
| Msa1084890 | Msa1284240 | 0.805712 | 1.169295e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284240 | MtrunA17_Chr8g0356421 | 92.398 | 513 | 30 | 3 | 1 | 513 | 8 | 511 | 0.0 | 971 |
| Msa1284240 | MtrunA17_Chr8g0356391 | 32.369 | 553 | 303 | 13 | 1 | 513 | 35 | 556 | 1.70e-77 | 253 |
| Msa1284240 | MtrunA17_Chr8g0356381 | 55.556 | 63 | 22 | 1 | 457 | 513 | 345 | 407 | 4.84e-17 | 83.2 |
| Msa1284240 | MtrunA17_Chr6g0488251 | 61.224 | 49 | 19 | 0 | 465 | 513 | 259 | 307 | 1.69e-16 | 80.5 |
| Msa1284240 | MtrunA17_Chr2g0309781 | 61.224 | 49 | 19 | 0 | 465 | 513 | 355 | 403 | 3.75e-16 | 80.5 |
| Msa1284240 | MtrunA17_Chr2g0309791 | 61.224 | 49 | 19 | 0 | 465 | 513 | 369 | 417 | 5.55e-16 | 80.1 |
| Msa1284240 | MtrunA17_Chr3g0130411 | 54.902 | 51 | 23 | 0 | 461 | 511 | 387 | 437 | 3.04e-14 | 74.7 |
| Msa1284240 | MtrunA17_Chr6g0458051 | 62.000 | 50 | 19 | 0 | 462 | 511 | 437 | 486 | 4.32e-14 | 74.7 |
| Msa1284240 | MtrunA17_Chr3g0116661 | 51.667 | 60 | 25 | 1 | 456 | 511 | 376 | 435 | 8.09e-13 | 70.5 |
| Msa1284240 | MtrunA17_Chr7g0226791 | 58.000 | 50 | 21 | 0 | 462 | 511 | 396 | 445 | 1.62e-12 | 69.3 |
| Msa1284240 | MtrunA17_Chr2g0309671 | 29.752 | 242 | 111 | 4 | 267 | 451 | 673 | 912 | 2.98e-12 | 69.7 |
| Msa1284240 | MtrunA17_Chr8g0381321 | 61.364 | 44 | 17 | 0 | 468 | 511 | 432 | 475 | 1.72e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284240 | AT1G79380.1 | 63.830 | 47 | 17 | 0 | 465 | 511 | 354 | 400 | 5.40e-15 | 77.4 |
| Msa1284240 | AT5G63970.2 | 40.625 | 96 | 49 | 2 | 421 | 511 | 274 | 366 | 6.97e-14 | 73.6 |
| Msa1284240 | AT5G63970.1 | 40.625 | 96 | 49 | 2 | 421 | 511 | 274 | 366 | 6.97e-14 | 73.6 |
| Msa1284240 | AT5G14420.3 | 63.043 | 46 | 17 | 0 | 466 | 511 | 423 | 468 | 5.81e-13 | 71.2 |
| Msa1284240 | AT5G14420.2 | 63.043 | 46 | 17 | 0 | 466 | 511 | 423 | 468 | 5.81e-13 | 71.2 |
| Msa1284240 | AT5G14420.4 | 63.043 | 46 | 17 | 0 | 466 | 511 | 423 | 468 | 5.81e-13 | 71.2 |
| Msa1284240 | AT5G14420.1 | 63.043 | 46 | 17 | 0 | 466 | 511 | 423 | 468 | 5.81e-13 | 71.2 |
| Msa1284240 | AT3G01650.2 | 60.870 | 46 | 18 | 0 | 466 | 511 | 444 | 489 | 1.81e-12 | 70.1 |
| Msa1284240 | AT3G01650.1 | 60.870 | 46 | 18 | 0 | 466 | 511 | 444 | 489 | 1.81e-12 | 70.1 |
| Msa1284240 | AT1G79280.1 | 32.386 | 176 | 101 | 3 | 336 | 495 | 785 | 958 | 1.33e-11 | 68.2 |
| Msa1284240 | AT1G17110.3 | 34.711 | 121 | 71 | 2 | 66 | 180 | 129 | 247 | 2.30e-11 | 67.0 |
| Msa1284240 | AT1G17110.1 | 34.711 | 121 | 71 | 2 | 66 | 180 | 129 | 247 | 2.30e-11 | 67.0 |
| Msa1284240 | AT1G17110.2 | 34.711 | 121 | 71 | 2 | 66 | 180 | 129 | 247 | 2.43e-11 | 67.0 |
| Msa1284240 | AT1G79280.2 | 32.919 | 161 | 92 | 2 | 336 | 480 | 785 | 945 | 3.95e-11 | 66.6 |
Find 79 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTCCTCCCTTTGTTTAT+TGG | 0.058796 | 8_3:+26304372 | None:intergenic |
| ATATCATGCATTGGAGATTT+TGG | 0.129525 | 8_3:-26303564 | Msa1284240:CDS |
| CAGTCCTTCCAAAGCAATTT+TGG | 0.147630 | 8_3:-26299667 | Msa1284240:CDS |
| GTCTCTTCAGCCATTCTTAT+AGG | 0.235297 | 8_3:+26299705 | None:intergenic |
| TTGTTCCCTCAAGTTCTTAT+TGG | 0.249810 | 8_3:-26304461 | Msa1284240:CDS |
| TGCAATCAAAGCTTAACTAT+TGG | 0.303071 | 8_3:-26300483 | Msa1284240:CDS |
| AGAAGATCACTGATCGTATT+AGG | 0.324076 | 8_3:-26298802 | Msa1284240:CDS |
| GAGAGACCTAAAAGAAGAAT+TGG | 0.327728 | 8_3:-26300637 | Msa1284240:CDS |
| ACAAAGGGAGGAGGAGGAGG+TGG | 0.355031 | 8_3:-26304365 | Msa1284240:CDS |
| TCAAAGGCTTCACTGTTTGC+AGG | 0.355774 | 8_3:-26300240 | Msa1284240:intron |
| TTAATTAAAGAAACAGCAAT+AGG | 0.369447 | 8_3:-26302663 | Msa1284240:CDS |
| ATGCAGATTGCAATGGAAAC+TGG | 0.376164 | 8_3:-26300150 | Msa1284240:intron |
| GAAACTGTAAAGTCTATTAG+AGG | 0.377927 | 8_3:+26300441 | None:intergenic |
| TTCTTCAGCCAAAATTGCTT+TGG | 0.380072 | 8_3:+26299659 | None:intergenic |
| GCAATCAAAGCTTAACTATT+GGG | 0.384195 | 8_3:-26300482 | Msa1284240:CDS |
| GATGCAAAGCTATAAAATAT+TGG | 0.385670 | 8_3:-26302584 | Msa1284240:intron |
| TGAAACTCAGTGCTTTCTCT+TGG | 0.398145 | 8_3:-26303482 | Msa1284240:CDS |
| TCTTCGTAGGGTTTCTTGCT+TGG | 0.400636 | 8_3:-26304426 | Msa1284240:CDS |
| GTTTCTGAATTTGCCACAAA+AGG | 0.420657 | 8_3:+26304270 | None:intergenic |
| AATGAGAAGGACATGGCCTT+TGG | 0.423926 | 8_3:-26298965 | Msa1284240:CDS |
| GGGGATGTTTACTATATTGA+AGG | 0.425846 | 8_3:-26302705 | Msa1284240:CDS |
| GGCCTTTGGTTGTGGACATA+TGG | 0.433784 | 8_3:-26298951 | Msa1284240:intron |
| TACCTCAACAACAGCAGCCT+TGG | 0.448360 | 8_3:+26299635 | None:intergenic |
| TCATTATCTACCACCTCATC+TGG | 0.453778 | 8_3:+26301034 | None:intergenic |
| AAGAAGAATTGGAAATGATC+AGG | 0.459481 | 8_3:-26300626 | Msa1284240:intron |
| TTCATATGACCCTCTATGCT+TGG | 0.463793 | 8_3:-26301008 | Msa1284240:CDS |
| AAGGACATGGCCTTTGGTTG+TGG | 0.470987 | 8_3:-26298959 | Msa1284240:CDS |
| TAATTAAAGAAACAGCAATA+GGG | 0.474696 | 8_3:-26302662 | Msa1284240:CDS |
| TGATGAGCATAAAACATATG+AGG | 0.489537 | 8_3:-26302727 | Msa1284240:CDS |
| TTGACCATTGTCAATCATCC+AGG | 0.492165 | 8_3:+26298773 | None:intergenic |
| CTAATTTCCAATCAAAATGT+TGG | 0.492269 | 8_3:+26301483 | None:intergenic |
| TAAACAAAGGGAGGAGGAGG+AGG | 0.495078 | 8_3:-26304368 | Msa1284240:CDS |
| CAACAAAGTCCAAGAGGTTG+AGG | 0.495272 | 8_3:-26300667 | Msa1284240:CDS |
| CAATAAACAAAGGGAGGAGG+AGG | 0.504132 | 8_3:-26304371 | Msa1284240:CDS |
| GTTACCTGGCTAGTCAAGGT+TGG | 0.504888 | 8_3:+26299198 | None:intergenic |
| TCAGCCAAAATTGCTTTGGA+AGG | 0.506663 | 8_3:+26299663 | None:intergenic |
| ATCTCAATTTCCTATAAGAA+TGG | 0.507525 | 8_3:-26299715 | Msa1284240:CDS |
| GATCGTATTAGGTTATTCCC+TGG | 0.512389 | 8_3:-26298791 | Msa1284240:CDS |
| GTAATGATAATACTCTTCGT+AGG | 0.514867 | 8_3:-26304439 | Msa1284240:CDS |
| ATGAAACTCTCTCTTAGTCT+TGG | 0.517408 | 8_3:+26299785 | None:intergenic |
| TGGTTACGAATTTATCTCAA+AGG | 0.520265 | 8_3:-26300256 | Msa1284240:CDS |
| TAACAACAAGTAATCAAGAA+TGG | 0.523734 | 8_3:-26301415 | Msa1284240:CDS |
| GATGTTTACTATATTGAAGG+AGG | 0.526795 | 8_3:-26302702 | Msa1284240:CDS |
| TAATGATAATACTCTTCGTA+GGG | 0.527626 | 8_3:-26304438 | Msa1284240:CDS |
| GAATAAAATTCCAAGCATAG+AGG | 0.529037 | 8_3:+26300998 | None:intergenic |
| CAGTGCTTTCTCTTGGAGCA+TGG | 0.529131 | 8_3:-26303475 | Msa1284240:CDS |
| AACAAAACAAGTACGTTGAA+AGG | 0.533145 | 8_3:-26299761 | Msa1284240:CDS |
| CATTACCAATAAGAACTTGA+GGG | 0.538899 | 8_3:+26304456 | None:intergenic |
| GATGAGCATAAAACATATGA+GGG | 0.539587 | 8_3:-26302726 | Msa1284240:CDS |
| CATAGTGGCTGTGCAGTTTG+TGG | 0.541654 | 8_3:-26302633 | Msa1284240:CDS |
| AAATCCAACCTTGACTAGCC+AGG | 0.544678 | 8_3:-26299202 | Msa1284240:intron |
| ATCCAAGGCTGCTGTTGTTG+AGG | 0.547362 | 8_3:-26299637 | Msa1284240:intron |
| ATGCAGACTTGCAGAGAGTG+TGG | 0.548113 | 8_3:-26298857 | Msa1284240:intron |
| AAATGAAGCCAATAAACAAA+GGG | 0.551784 | 8_3:-26304380 | Msa1284240:CDS |
| TTGTCTTCTTAACACGACAT+TGG | 0.553520 | 8_3:+26301450 | None:intergenic |
| AGAGTTTATACATATGCTGC+AGG | 0.557556 | 8_3:-26300103 | Msa1284240:intron |
| AAGCATGTCATATCATGCAT+TGG | 0.560692 | 8_3:-26303573 | Msa1284240:CDS |
| TTAAGTTACCTGGCTAGTCA+AGG | 0.561973 | 8_3:+26299194 | None:intergenic |
| TGAGAAACAAGCTCGTCAAA+TGG | 0.563718 | 8_3:-26300276 | Msa1284240:CDS |
| TACCATATGTCCACAACCAA+AGG | 0.570532 | 8_3:+26298949 | None:intergenic |
| GCAATAGGGCTTCAACATAG+TGG | 0.574026 | 8_3:-26302648 | Msa1284240:CDS |
| AATAAAATTCCAAGCATAGA+GGG | 0.576742 | 8_3:+26300999 | None:intergenic |
| GCCTCAAAATCCAGATGAGG+TGG | 0.580299 | 8_3:-26301044 | Msa1284240:CDS |
| CAAGAAAGAAAATGAACACC+AGG | 0.580380 | 8_3:-26300419 | Msa1284240:intron |
| CAAATGAAGCCAATAAACAA+AGG | 0.583580 | 8_3:-26304381 | Msa1284240:CDS |
| CTTAAGCAATGAGAAGGACA+TGG | 0.593681 | 8_3:-26298972 | Msa1284240:CDS |
| TCATTACCAATAAGAACTTG+AGG | 0.593960 | 8_3:+26304455 | None:intergenic |
| TGCAGACTTGCAGAGAGTGT+GGG | 0.612908 | 8_3:-26298856 | Msa1284240:intron |
| AATTTGCTTAAGCAATGAGA+AGG | 0.614017 | 8_3:-26298978 | Msa1284240:CDS |
| AGCCAATAAACAAAGGGAGG+AGG | 0.621762 | 8_3:-26304374 | Msa1284240:CDS |
| TGAAGCCAATAAACAAAGGG+AGG | 0.629642 | 8_3:-26304377 | Msa1284240:CDS |
| TGACCATTGTCAATCATCCA+GGG | 0.639461 | 8_3:+26298774 | None:intergenic |
| AGTGTCTGCAGAAGAACATG+AGG | 0.649775 | 8_3:-26303518 | Msa1284240:CDS |
| AATGCCTCAAAATCCAGATG+AGG | 0.659583 | 8_3:-26301047 | Msa1284240:CDS |
| AGCTAACAACAAAGTCCAAG+AGG | 0.661035 | 8_3:-26300673 | Msa1284240:CDS |
| TGAGCATAAAACATATGAGG+GGG | 0.682276 | 8_3:-26302724 | Msa1284240:CDS |
| AGAAGAAAATATCAACAACA+AGG | 0.698009 | 8_3:-26300795 | Msa1284240:CDS |
| ATGAGCATAAAACATATGAG+GGG | 0.724398 | 8_3:-26302725 | Msa1284240:CDS |
| TGGAAACTGGAGTAGCAGAG+AGG | 0.732918 | 8_3:-26300137 | Msa1284240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAATATAAAAAAAAA+AGG | - | chr8_3:26300068-26300087 | Msa1284240:intron | 0.0% |
| !! | AAATACTTATCATAAAAAAA+AGG | + | chr8_3:26299901-26299920 | None:intergenic | 10.0% |
| !!! | ATTTTGCATAAAAATTAAAA+TGG | - | chr8_3:26301183-26301202 | Msa1284240:intron | 10.0% |
| !!! | ATGAATTTACTTTTTTTTTT+TGG | + | chr8_3:26301370-26301389 | None:intergenic | 10.0% |
| !!! | TATTAAAAATAATAGAGTTT+TGG | - | chr8_3:26301479-26301498 | Msa1284240:CDS | 10.0% |
| !!! | ATATTTTATTGAAAGAATAT+AGG | - | chr8_3:26301540-26301559 | Msa1284240:intron | 10.0% |
| !!! | TCTTTTTTTTTTTTTTTAAC+AGG | - | chr8_3:26302185-26302204 | Msa1284240:intron | 10.0% |
| !! | TATTTGAAAAAATAAATGAA+TGG | + | chr8_3:26302354-26302373 | None:intergenic | 10.0% |
| !!! | GATTTATAATTTACTTTTAT+AGG | - | chr8_3:26303736-26303755 | Msa1284240:intron | 10.0% |
| !!! | AATATTATTTCTGTTATAAT+TGG | - | chr8_3:26304213-26304232 | Msa1284240:intron | 10.0% |
| !! | AATCATTCAAAATAACTATT+TGG | - | chr8_3:26299405-26299424 | Msa1284240:intron | 15.0% |
| !!! | TTTCTATGCTATTTTAAATT+AGG | + | chr8_3:26299446-26299465 | None:intergenic | 15.0% |
| !! | AAAGATTAATTGTATAAACT+AGG | + | chr8_3:26299839-26299858 | None:intergenic | 15.0% |
| !! | TCAGAAAATTAAATAAGTTT+AGG | - | chr8_3:26300261-26300280 | Msa1284240:CDS | 15.0% |
| !!! | TTTTTATCTATATATGACTT+AGG | - | chr8_3:26300414-26300433 | Msa1284240:intron | 15.0% |
| !!! | TTCTAAAAGTAAAGATAATA+AGG | - | chr8_3:26300440-26300459 | Msa1284240:CDS | 15.0% |
| !! | AAATATTAACATTAATATGC+AGG | - | chr8_3:26300475-26300494 | Msa1284240:CDS | 15.0% |
| !! | ACTTAAAAAGTTTAATTAGT+TGG | + | chr8_3:26300745-26300764 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr8_3:26300901-26300920 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | - | chr8_3:26300978-26300997 | Msa1284240:intron | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | chr8_3:26300979-26300998 | Msa1284240:intron | 15.0% |
| !!! | TTTCAAAAGTTTTTTTTTAC+AGG | - | chr8_3:26301007-26301026 | Msa1284240:CDS | 15.0% |
| !!! | TTCAAAAGTTTTTTTTTACA+GGG | - | chr8_3:26301008-26301027 | Msa1284240:CDS | 15.0% |
| !! | AGTCAAAAAATAAATTGAAT+TGG | - | chr8_3:26301156-26301175 | Msa1284240:intron | 15.0% |
| !! | GTCAAAAAATAAATTGAATT+GGG | - | chr8_3:26301157-26301176 | Msa1284240:intron | 15.0% |
| !! | TCAAAAAATAAATTGAATTG+GGG | - | chr8_3:26301158-26301177 | Msa1284240:intron | 15.0% |
| !!! | ATTTACTTTTTTTTTTTGGA+TGG | + | chr8_3:26301366-26301385 | None:intergenic | 15.0% |
| !! | TAAATGTAAATTCATTATTG+AGG | - | chr8_3:26302081-26302100 | Msa1284240:intron | 15.0% |
| !! | CATGTTATAAAGTAAAAATT+GGG | - | chr8_3:26302131-26302150 | Msa1284240:intron | 15.0% |
| !! | ATGAAATCAAAATATACAAA+AGG | + | chr8_3:26302415-26302434 | None:intergenic | 15.0% |
| !! | AAAAGTAAATTATAAATCCT+CGG | + | chr8_3:26303734-26303753 | None:intergenic | 15.0% |
| !! | CTTATGTTTAAATTATATTC+AGG | - | chr8_3:26304009-26304028 | Msa1284240:intron | 15.0% |
| !!! | AAATGTTTTTGAGTAAATAT+TGG | + | chr8_3:26304181-26304200 | None:intergenic | 15.0% |
| !! | ATAATGAACAAAAAGGATAA+AGG | + | chr8_3:26299084-26299103 | None:intergenic | 20.0% |
| !! | TGCATATATAATGAACAAAA+AGG | + | chr8_3:26299091-26299110 | None:intergenic | 20.0% |
| !!! | CCTAAAACTTTGTTTTATTA+GGG | + | chr8_3:26299173-26299192 | None:intergenic | 20.0% |
| !!! | ACCTAAAACTTTGTTTTATT+AGG | + | chr8_3:26299174-26299193 | None:intergenic | 20.0% |
| !! | TTTCAATATTCATTTCTTTC+TGG | - | chr8_3:26299571-26299590 | Msa1284240:intron | 20.0% |
| !!! | AAACGATTTTGATTTTAATG+TGG | - | chr8_3:26299645-26299664 | Msa1284240:CDS | 20.0% |
| !! | GAAATATTCATAAATAGTGT+GGG | - | chr8_3:26300283-26300302 | Msa1284240:CDS | 20.0% |
| !! | TTAATTAAAGAAACAGCAAT+AGG | - | chr8_3:26300596-26300615 | Msa1284240:intron | 20.0% |
| !! | TAATTAAAGAAACAGCAATA+GGG | - | chr8_3:26300597-26300616 | Msa1284240:intron | 20.0% |
| !! | AAAAATCACAAAAACATGAA+AGG | + | chr8_3:26300776-26300795 | None:intergenic | 20.0% |
| !!! | TCACAAAAACATTTTTTTGA+AGG | + | chr8_3:26300801-26300820 | None:intergenic | 20.0% |
| !!! | TCTATAGTCGTATTTTTTTT+AGG | - | chr8_3:26300826-26300845 | Msa1284240:intron | 20.0% |
| !!! | CTATAGTCGTATTTTTTTTA+GGG | - | chr8_3:26300827-26300846 | Msa1284240:intron | 20.0% |
| !!! | TAAAAATAATAGAGTTTTGG+AGG | - | chr8_3:26301482-26301501 | Msa1284240:CDS | 20.0% |
| !!! | AAAAATAATAGAGTTTTGGA+GGG | - | chr8_3:26301483-26301502 | Msa1284240:CDS | 20.0% |
| !!! | AATGCATGATTTTATGTAAA+AGG | - | chr8_3:26301684-26301703 | Msa1284240:intron | 20.0% |
| !!! | AACATTTTGATTGGAAATTA+GGG | - | chr8_3:26301778-26301797 | Msa1284240:intron | 20.0% |
| !!! | CCAATTTTTACTTTATAACA+TGG | + | chr8_3:26302133-26302152 | None:intergenic | 20.0% |
| !! | CCATGTTATAAAGTAAAAAT+TGG | - | chr8_3:26302130-26302149 | Msa1284240:intron | 20.0% |
| !!! | AACAAGTACATTTTTCTTTT+AGG | + | chr8_3:26302541-26302560 | None:intergenic | 20.0% |
| !! | TATATAAGAAATATGAGTGT+TGG | - | chr8_3:26302656-26302675 | Msa1284240:CDS | 20.0% |
| !!! | TCACAATCTAACTTTAATTT+TGG | + | chr8_3:26302888-26302907 | None:intergenic | 20.0% |
| !!! | AAAAATATGATCCAGTTTTT+TGG | + | chr8_3:26304340-26304359 | None:intergenic | 20.0% |
| ! | TAATGATAATACTCTTCGTA+GGG | - | chr8_3:26298821-26298840 | Msa1284240:CDS | 25.0% |
| ! | AAATGAAGCCAATAAACAAA+GGG | - | chr8_3:26298879-26298898 | Msa1284240:intron | 25.0% |
| ! | GATGCAAAAATGCTATATAT+TGG | - | chr8_3:26299031-26299050 | Msa1284240:intron | 25.0% |
| ! | TTATAATATTAGTGCCTTTC+TGG | - | chr8_3:26299111-26299130 | Msa1284240:intron | 25.0% |
| ! | TATAATATTAGTGCCTTTCT+GGG | - | chr8_3:26299112-26299131 | Msa1284240:intron | 25.0% |
| !! | CCCTAATAAAACAAAGTTTT+AGG | - | chr8_3:26299170-26299189 | Msa1284240:intron | 25.0% |
| ! | TACATACAAATAATGAGAAG+TGG | - | chr8_3:26299267-26299286 | Msa1284240:intron | 25.0% |
| ! | ACATACAAATAATGAGAAGT+GGG | - | chr8_3:26299268-26299287 | Msa1284240:intron | 25.0% |
| !!! | TAGTTTGAAATCCTCATTTT+AGG | - | chr8_3:26299866-26299885 | Msa1284240:intron | 25.0% |
| !!! | AAACTTCATTGACTTTTTTG+AGG | + | chr8_3:26299965-26299984 | None:intergenic | 25.0% |
| ! | GGAAATATTCATAAATAGTG+TGG | - | chr8_3:26300282-26300301 | Msa1284240:CDS | 25.0% |
| ! | GATGCAAAGCTATAAAATAT+TGG | - | chr8_3:26300675-26300694 | Msa1284240:CDS | 25.0% |
| !!! | TGTTTTTTAAAATAGTCCCT+GGG | + | chr8_3:26300967-26300986 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTAAAATAGTCCC+TGG | + | chr8_3:26300968-26300987 | None:intergenic | 25.0% |
| !! | ATAAGGCTAAAATATGCTTT+TGG | + | chr8_3:26301066-26301085 | None:intergenic | 25.0% |
| !! | AGTTTTCTTAGAGTCTATTT+TGG | + | chr8_3:26301658-26301677 | None:intergenic | 25.0% |
| ! | CTAATTTCCAATCAAAATGT+TGG | + | chr8_3:26301779-26301798 | None:intergenic | 25.0% |
| !!! | CAACATTTTGATTGGAAATT+AGG | - | chr8_3:26301777-26301796 | Msa1284240:intron | 25.0% |
| ! | TAACAACAAGTAATCAAGAA+TGG | - | chr8_3:26301844-26301863 | Msa1284240:intron | 25.0% |
| !! | ATAATTACATTTTCATCTGC+AGG | + | chr8_3:26301870-26301889 | None:intergenic | 25.0% |
| ! | AATAAAATTCCAAGCATAGA+GGG | + | chr8_3:26302263-26302282 | None:intergenic | 25.0% |
| ! | TTCACTTATTCATCTTTGTT+TGG | - | chr8_3:26302434-26302453 | Msa1284240:intron | 25.0% |
| ! | AGAAGAAAATATCAACAACA+AGG | - | chr8_3:26302464-26302483 | Msa1284240:intron | 25.0% |
| !! | TATGATTGACTTTGGAAATT+TGG | - | chr8_3:26302508-26302527 | Msa1284240:intron | 25.0% |
| !! | TTTAACTTAAGTTACAATGC+AGG | - | chr8_3:26302562-26302581 | Msa1284240:intron | 25.0% |
| !! | TCATTTCCAATTCTTCTTTT+AGG | + | chr8_3:26302631-26302650 | None:intergenic | 25.0% |
| ! | TCTTGAAATGAATTATTACC+TGG | + | chr8_3:26302861-26302880 | None:intergenic | 25.0% |
| ! | AGGTAATAATTCATTTCAAG+AGG | - | chr8_3:26302860-26302879 | Msa1284240:intron | 25.0% |
| ! | AATGTAAGTTGCATAAACTA+TGG | + | chr8_3:26303048-26303067 | None:intergenic | 25.0% |
| ! | ATCTCAATTTCCTATAAGAA+TGG | - | chr8_3:26303544-26303563 | Msa1284240:CDS | 25.0% |
| ! | AAATAATGAGAATTGAGATC+AGG | - | chr8_3:26303862-26303881 | Msa1284240:intron | 25.0% |
| ! | AAAAGACAGAGAAAAATGAT+AGG | - | chr8_3:26304087-26304106 | Msa1284240:intron | 25.0% |
| !!! | TCAAAGTAACTTTAGTTCTT+TGG | + | chr8_3:26304243-26304262 | None:intergenic | 25.0% |
| CATTACCAATAAGAACTTGA+GGG | + | chr8_3:26298806-26298825 | None:intergenic | 30.0% | |
| TCATTACCAATAAGAACTTG+AGG | + | chr8_3:26298807-26298826 | None:intergenic | 30.0% | |
| GTAATGATAATACTCTTCGT+AGG | - | chr8_3:26298820-26298839 | Msa1284240:CDS | 30.0% | |
| CAAATGAAGCCAATAAACAA+AGG | - | chr8_3:26298878-26298897 | Msa1284240:intron | 30.0% | |
| AGGAAAGATGGAATAAGATT+TGG | + | chr8_3:26299064-26299083 | None:intergenic | 30.0% | |
| CAAAAAGGATAAAGGAAAGA+TGG | + | chr8_3:26299076-26299095 | None:intergenic | 30.0% | |
| AAAAAAACTTCTACCCAGAA+AGG | + | chr8_3:26299128-26299147 | None:intergenic | 30.0% | |
| TCGTACGTAAAGTTTATTCA+TGG | - | chr8_3:26299508-26299527 | Msa1284240:intron | 30.0% | |
| ! | ATATCATGCATTGGAGATTT+TGG | - | chr8_3:26299695-26299714 | Msa1284240:CDS | 30.0% |
| ! | GACATGGAGTTTTTGTAAAT+CGG | + | chr8_3:26300016-26300035 | None:intergenic | 30.0% |
| GATTTACAAAAACTCCATGT+CGG | - | chr8_3:26300015-26300034 | Msa1284240:intron | 30.0% | |
| ATTTACAAAAACTCCATGTC+GGG | - | chr8_3:26300016-26300035 | Msa1284240:intron | 30.0% | |
| TTATTAATTGAAACCCGACA+TGG | + | chr8_3:26300032-26300051 | None:intergenic | 30.0% | |
| ACGCGTTTGAATAATAGAAT+GGG | + | chr8_3:26300352-26300371 | None:intergenic | 30.0% | |
| AACGCGTTTGAATAATAGAA+TGG | + | chr8_3:26300353-26300372 | None:intergenic | 30.0% | |
| TGATGAGCATAAAACATATG+AGG | - | chr8_3:26300532-26300551 | Msa1284240:intron | 30.0% | |
| GATGAGCATAAAACATATGA+GGG | - | chr8_3:26300533-26300552 | Msa1284240:intron | 30.0% | |
| ATGAGCATAAAACATATGAG+GGG | - | chr8_3:26300534-26300553 | Msa1284240:intron | 30.0% | |
| GATGTTTACTATATTGAAGG+AGG | - | chr8_3:26300557-26300576 | Msa1284240:intron | 30.0% | |
| ! | TTTGCATCTTGAGCATTTTT+GGG | + | chr8_3:26300663-26300682 | None:intergenic | 30.0% |
| AATCACAAAAACATGAAAGG+TGG | + | chr8_3:26300773-26300792 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr8_3:26300870-26300889 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr8_3:26300871-26300890 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr8_3:26300886-26300905 | None:intergenic | 30.0% | |
| !! | GAGAGAACTTGTTTTTCTTT+TGG | + | chr8_3:26301630-26301649 | None:intergenic | 30.0% |
| !! | TTTCTTAGAGTCTATTTTGG+AGG | + | chr8_3:26301655-26301674 | None:intergenic | 30.0% |
| !! | AAACATGCCAACATTTTGAT+TGG | - | chr8_3:26301769-26301788 | Msa1284240:intron | 30.0% |
| CAAATCCATCCTTAGAAAAA+TGG | - | chr8_3:26301925-26301944 | Msa1284240:intron | 30.0% | |
| TTGGGACATTTAAATGATTG+TGG | - | chr8_3:26302149-26302168 | Msa1284240:intron | 30.0% | |
| GAATAAAATTCCAAGCATAG+AGG | + | chr8_3:26302264-26302283 | None:intergenic | 30.0% | |
| ! | CTATGCTTGGAATTTTATTC+AGG | - | chr8_3:26302264-26302283 | Msa1284240:intron | 30.0% |
| ! | CTTATTCATCTTTGTTTGGT+TGG | - | chr8_3:26302438-26302457 | Msa1284240:intron | 30.0% |
| AAGAAGAATTGGAAATGATC+AGG | - | chr8_3:26302633-26302652 | Msa1284240:CDS | 30.0% | |
| TGCAATCAAAGCTTAACTAT+TGG | - | chr8_3:26302776-26302795 | Msa1284240:intron | 30.0% | |
| GCAATCAAAGCTTAACTATT+GGG | - | chr8_3:26302777-26302796 | Msa1284240:intron | 30.0% | |
| GAAACTGTAAAGTCTATTAG+AGG | + | chr8_3:26302821-26302840 | None:intergenic | 30.0% | |
| TGGTTACGAATTTATCTCAA+AGG | - | chr8_3:26303003-26303022 | Msa1284240:intron | 30.0% | |
| ! | AATCTGCATGGTTTTTGTTA+GGG | + | chr8_3:26303098-26303117 | None:intergenic | 30.0% |
| CTGTAAATTAACAAATGCCA+AGG | + | chr8_3:26303444-26303463 | None:intergenic | 30.0% | |
| AACAAAACAAGTACGTTGAA+AGG | - | chr8_3:26303498-26303517 | Msa1284240:CDS | 30.0% | |
| TCGTAACATAATCTAACGAA+GGG | + | chr8_3:26303671-26303690 | None:intergenic | 30.0% | |
| TTCGTAACATAATCTAACGA+AGG | + | chr8_3:26303672-26303691 | None:intergenic | 30.0% | |
| ! | CTTTTATAGGCAAATGTTAG+TGG | - | chr8_3:26303749-26303768 | Msa1284240:intron | 30.0% |
| GCTTAAGTTCATATATTTGC+AGG | - | chr8_3:26303969-26303988 | Msa1284240:intron | 30.0% | |
| ! | AATTTGCTTAAGCAATGAGA+AGG | - | chr8_3:26304281-26304300 | Msa1284240:CDS | 30.0% |
| TTGTTCCCTCAAGTTCTTAT+TGG | - | chr8_3:26298798-26298817 | Msa1284240:CDS | 35.0% | |
| ! | TATTGTGTTTGCTCCTTTTG+TGG | - | chr8_3:26298976-26298995 | Msa1284240:CDS | 35.0% |
| GTTTCTGAATTTGCCACAAA+AGG | + | chr8_3:26298992-26299011 | None:intergenic | 35.0% | |
| !!! | TCTGGGTAGAAGTTTTTTTG+CGG | - | chr8_3:26299129-26299148 | Msa1284240:intron | 35.0% |
| TTTGCGGCTTTACTAAAAGA+AGG | - | chr8_3:26299145-26299164 | Msa1284240:intron | 35.0% | |
| TACAAATAATGAGAAGTGGG+TGG | - | chr8_3:26299271-26299290 | Msa1284240:intron | 35.0% | |
| ACAAATAATGAGAAGTGGGT+GGG | - | chr8_3:26299272-26299291 | Msa1284240:intron | 35.0% | |
| AAGCATGTCATATCATGCAT+TGG | - | chr8_3:26299686-26299705 | Msa1284240:CDS | 35.0% | |
| GGTCAAACAATCCTAAAATG+AGG | + | chr8_3:26299880-26299899 | None:intergenic | 35.0% | |
| TTTCTAGATGCAGCTTATTG+TGG | - | chr8_3:26299920-26299939 | Msa1284240:intron | 35.0% | |
| TGAGCATAAAACATATGAGG+GGG | - | chr8_3:26300535-26300554 | Msa1284240:intron | 35.0% | |
| GGGGATGTTTACTATATTGA+AGG | - | chr8_3:26300554-26300573 | Msa1284240:intron | 35.0% | |
| ! | CTTTGCATCTTGAGCATTTT+TGG | + | chr8_3:26300664-26300683 | None:intergenic | 35.0% |
| ! | TATTTGGCAGGTTTTTGCTT+AGG | + | chr8_3:26300930-26300949 | None:intergenic | 35.0% |
| TGCCAAATAAGCAAGAAAGT+GGG | - | chr8_3:26300941-26300960 | Msa1284240:intron | 35.0% | |
| !! | AATATGGCTCATTTGGGTTT+TGG | + | chr8_3:26301035-26301054 | None:intergenic | 35.0% |
| AGTTTCTTGTATCTACCTAC+TGG | - | chr8_3:26301211-26301230 | Msa1284240:intron | 35.0% | |
| CTACTGGTGAAAATAAGCTA+GGG | - | chr8_3:26301227-26301246 | Msa1284240:intron | 35.0% | |
| ! | ATTAGAACGTATACCGACTA+CGG | - | chr8_3:26301269-26301288 | Msa1284240:intron | 35.0% |
| TTGTCTTCTTAACACGACAT+TGG | + | chr8_3:26301812-26301831 | None:intergenic | 35.0% | |
| !! | ACAGTCCATTTTTCTAAGGA+TGG | + | chr8_3:26301933-26301952 | None:intergenic | 35.0% |
| !! | TAGCACAGTCCATTTTTCTA+AGG | + | chr8_3:26301937-26301956 | None:intergenic | 35.0% |
| !!! | GGCTCTGATTTTAATTTCTC+AGG | - | chr8_3:26302485-26302504 | Msa1284240:intron | 35.0% |
| ! | TTCTCAGGTATGATTGACTT+TGG | - | chr8_3:26302500-26302519 | Msa1284240:intron | 35.0% |
| !!! | TCATTTTTTCCTCAACCTCT+TGG | + | chr8_3:26302604-26302623 | None:intergenic | 35.0% |
| GAGAGACCTAAAAGAAGAAT+TGG | - | chr8_3:26302622-26302641 | Msa1284240:CDS | 35.0% | |
| CAAGAAAGAAAATGAACACC+AGG | - | chr8_3:26302840-26302859 | Msa1284240:intron | 35.0% | |
| ! | CAATCTGCATGGTTTTTGTT+AGG | + | chr8_3:26303099-26303118 | None:intergenic | 35.0% |
| AAAAACCATGCAGATTGCAA+TGG | - | chr8_3:26303102-26303121 | Msa1284240:intron | 35.0% | |
| AGAGTTTATACATATGCTGC+AGG | - | chr8_3:26303156-26303175 | Msa1284240:intron | 35.0% | |
| TCAGTGTGTCATATGTTTGA+AGG | - | chr8_3:26303371-26303390 | Msa1284240:intron | 35.0% | |
| ATGTTTGAAGGCAAATAGAG+AGG | - | chr8_3:26303383-26303402 | Msa1284240:intron | 35.0% | |
| AAGGAGTAGTAAGTAACTTG+AGG | + | chr8_3:26303425-26303444 | None:intergenic | 35.0% | |
| TCAAGTTACTTACTACTCCT+TGG | - | chr8_3:26303424-26303443 | Msa1284240:intron | 35.0% | |
| ATGAAACTCTCTCTTAGTCT+TGG | + | chr8_3:26303477-26303496 | None:intergenic | 35.0% | |
| TTCTTCAGCCAAAATTGCTT+TGG | + | chr8_3:26303603-26303622 | None:intergenic | 35.0% | |
| !!! | AATTTTGGCTGAAGAATCCA+AGG | - | chr8_3:26303607-26303626 | Msa1284240:intron | 35.0% |
| CGTAACATAATCTAACGAAG+GGG | + | chr8_3:26303670-26303689 | None:intergenic | 35.0% | |
| TACTACGCTAAGTGTACATT+AGG | - | chr8_3:26303701-26303720 | Msa1284240:intron | 35.0% | |
| !!! | CTCTGTCTTTTTAAGTTACC+TGG | + | chr8_3:26304078-26304097 | None:intergenic | 35.0% |
| TATGGTAAGGTCCAAAAAAC+TGG | - | chr8_3:26304326-26304345 | Msa1284240:CDS | 35.0% | |
| AGAAGATCACTGATCGTATT+AGG | - | chr8_3:26304457-26304476 | Msa1284240:CDS | 35.0% | |
| TGAAGCCAATAAACAAAGGG+AGG | - | chr8_3:26298882-26298901 | Msa1284240:intron | 40.0% | |
| CAAATAATGAGAAGTGGGTG+GGG | - | chr8_3:26299273-26299292 | Msa1284240:intron | 40.0% | |
| TGAAACTCAGTGCTTTCTCT+TGG | - | chr8_3:26299777-26299796 | Msa1284240:CDS | 40.0% | |
| TAGATGCAGCTTATTGTGGA+AGG | - | chr8_3:26299924-26299943 | Msa1284240:intron | 40.0% | |
| AGATGCAGCTTATTGTGGAA+GGG | - | chr8_3:26299925-26299944 | Msa1284240:intron | 40.0% | |
| !! | CTTGAGCATTTTTGGGAACA+TGG | + | chr8_3:26300656-26300675 | None:intergenic | 40.0% |
| CACTTTCTTGCTTATTTGGC+AGG | + | chr8_3:26300942-26300961 | None:intergenic | 40.0% | |
| CTGCCAAATAAGCAAGAAAG+TGG | - | chr8_3:26300940-26300959 | Msa1284240:intron | 40.0% | |
| CCTGCAAATATGGCTCATTT+GGG | + | chr8_3:26301041-26301060 | None:intergenic | 40.0% | |
| CCAAATGAGCCATATTTGCA+GGG | - | chr8_3:26301039-26301058 | Msa1284240:CDS | 40.0% | |
| !! | CCTAGCTTATTTTCACCAGT+AGG | + | chr8_3:26301229-26301248 | None:intergenic | 40.0% |
| CCTACTGGTGAAAATAAGCT+AGG | - | chr8_3:26301226-26301245 | Msa1284240:intron | 40.0% | |
| ! | TTAGAACGTATACCGACTAC+GGG | - | chr8_3:26301270-26301289 | Msa1284240:intron | 40.0% |
| !! | AGCTTATTTTCACCCGTAGT+CGG | + | chr8_3:26301285-26301304 | None:intergenic | 40.0% |
| ACTACGGGTGAAAATAAGCT+AGG | - | chr8_3:26301285-26301304 | Msa1284240:intron | 40.0% | |
| AGCTAGGTAAGTCTGACATA+AGG | - | chr8_3:26301301-26301320 | Msa1284240:intron | 40.0% | |
| GGCACAAAAAACATGAAGCT+TGG | + | chr8_3:26301730-26301749 | None:intergenic | 40.0% | |
| TTGTGAGCTGCAAGAGAAAA+AGG | + | chr8_3:26301751-26301770 | None:intergenic | 40.0% | |
| AATGCCTCAAAATCCAGATG+AGG | - | chr8_3:26302212-26302231 | Msa1284240:intron | 40.0% | |
| TCATTATCTACCACCTCATC+TGG | + | chr8_3:26302228-26302247 | None:intergenic | 40.0% | |
| TTCATATGACCCTCTATGCT+TGG | - | chr8_3:26302251-26302270 | Msa1284240:intron | 40.0% | |
| AGCTAACAACAAAGTCCAAG+AGG | - | chr8_3:26302586-26302605 | Msa1284240:CDS | 40.0% | |
| TTACATAAGTCGATGACACG+TGG | + | chr8_3:26302686-26302705 | None:intergenic | 40.0% | |
| TGAGAAACAAGCTCGTCAAA+TGG | - | chr8_3:26302983-26303002 | Msa1284240:intron | 40.0% | |
| AGTTTCCATTGCAATCTGCA+TGG | + | chr8_3:26303110-26303129 | None:intergenic | 40.0% | |
| ATGCAGATTGCAATGGAAAC+TGG | - | chr8_3:26303109-26303128 | Msa1284240:intron | 40.0% | |
| ATGGCTTCAATCATTGGTGT+TGG | + | chr8_3:26303235-26303254 | None:intergenic | 40.0% | |
| CTGAACATGGCTTCAATCAT+TGG | + | chr8_3:26303241-26303260 | None:intergenic | 40.0% | |
| CACGTTTCTAACACTGAACA+TGG | + | chr8_3:26303254-26303273 | None:intergenic | 40.0% | |
| ATGACACACTGACATAGACA+AGG | + | chr8_3:26303363-26303382 | None:intergenic | 40.0% | |
| GTCTCTTCAGCCATTCTTAT+AGG | + | chr8_3:26303557-26303576 | None:intergenic | 40.0% | |
| ! | CAGTCCTTCCAAAGCAATTT+TGG | - | chr8_3:26303592-26303611 | Msa1284240:intron | 40.0% |
| ! | TCAGCCAAAATTGCTTTGGA+AGG | + | chr8_3:26303599-26303618 | None:intergenic | 40.0% |
| ATGTACACTTAGCGTAGTAG+TGG | + | chr8_3:26303700-26303719 | None:intergenic | 40.0% | |
| CGCTAAGTGTACATTAGGAA+AGG | - | chr8_3:26303706-26303725 | Msa1284240:intron | 40.0% | |
| TTACCACACTGAAACCTAGA+AGG | + | chr8_3:26303835-26303854 | None:intergenic | 40.0% | |
| TGAGATCAGGTGTCTTTGTA+AGG | - | chr8_3:26303875-26303894 | Msa1284240:intron | 40.0% | |
| ! | TTAAGTTACCTGGCTAGTCA+AGG | + | chr8_3:26304068-26304087 | None:intergenic | 40.0% |
| CTTAAGCAATGAGAAGGACA+TGG | - | chr8_3:26304287-26304306 | Msa1284240:CDS | 40.0% | |
| TACCATATGTCCACAACCAA+AGG | + | chr8_3:26304313-26304332 | None:intergenic | 40.0% | |
| TTGGTTGTGGACATATGGTA+AGG | - | chr8_3:26304313-26304332 | Msa1284240:CDS | 40.0% | |
| GATCGTATTAGGTTATTCCC+TGG | - | chr8_3:26304468-26304487 | Msa1284240:CDS | 40.0% | |
| TCTTCGTAGGGTTTCTTGCT+TGG | - | chr8_3:26298833-26298852 | Msa1284240:CDS | 45.0% | |
| AGCCAATAAACAAAGGGAGG+AGG | - | chr8_3:26298885-26298904 | Msa1284240:intron | 45.0% | |
| ! | CTCCTCCTCCCTTTGTTTAT+TGG | + | chr8_3:26298890-26298909 | None:intergenic | 45.0% |
| CAATAAACAAAGGGAGGAGG+AGG | - | chr8_3:26298888-26298907 | Msa1284240:intron | 45.0% | |
| AGTGTCTGCAGAAGAACATG+AGG | - | chr8_3:26299741-26299760 | Msa1284240:CDS | 45.0% | |
| GCAATAGGGCTTCAACATAG+TGG | - | chr8_3:26300611-26300630 | Msa1284240:intron | 45.0% | |
| GGCCCACTTTCTTGCTTATT+TGG | + | chr8_3:26300946-26300965 | None:intergenic | 45.0% | |
| CCCAAATGAGCCATATTTGC+AGG | - | chr8_3:26301038-26301057 | Msa1284240:CDS | 45.0% | |
| CCCTGCAAATATGGCTCATT+TGG | + | chr8_3:26301042-26301061 | None:intergenic | 45.0% | |
| ! | GCTTTTGGTCCCTGCAAATA+TGG | + | chr8_3:26301051-26301070 | None:intergenic | 45.0% |
| ! | ACCACCTCATCTGGATTTTG+AGG | + | chr8_3:26302219-26302238 | None:intergenic | 45.0% |
| CAACAAAGTCCAAGAGGTTG+AGG | - | chr8_3:26302592-26302611 | Msa1284240:CDS | 45.0% | |
| TCAAAGGCTTCACTGTTTGC+AGG | - | chr8_3:26303019-26303038 | Msa1284240:intron | 45.0% | |
| ATGACACTGACACAAACACG+TGG | + | chr8_3:26303331-26303350 | None:intergenic | 45.0% | |
| GTTTGTGTCAGTGTCATGTC+TGG | - | chr8_3:26303334-26303353 | Msa1284240:intron | 45.0% | |
| GTACATTAGGAAAGGAACCG+AGG | - | chr8_3:26303714-26303733 | Msa1284240:intron | 45.0% | |
| !! | GGAGAATTTGTTAGCAGCAC+CGG | - | chr8_3:26303794-26303813 | Msa1284240:intron | 45.0% |
| GAAACCTAGAAGGAGGTTCA+AGG | + | chr8_3:26303825-26303844 | None:intergenic | 45.0% | |
| GGTTTCAGTGTGGTAAAGAG+AGG | - | chr8_3:26303839-26303858 | Msa1284240:intron | 45.0% | |
| ! | AAATCCAACCTTGACTAGCC+AGG | - | chr8_3:26304057-26304076 | Msa1284240:intron | 45.0% |
| AATGAGAAGGACATGGCCTT+TGG | - | chr8_3:26304294-26304313 | Msa1284240:CDS | 45.0% | |
| !!! | TTTTTTATATTTAAAATCAA+GGG | + | chr8_3:26300065-26300084 | None:intergenic | 5.0% |
| !!! | TTTTTTTATATTTAAAATCA+AGG | + | chr8_3:26300066-26300085 | None:intergenic | 5.0% |
| !! | TTATATATATAGTTAAAATA+AGG | + | chr8_3:26301083-26301102 | None:intergenic | 5.0% |
| !!! | ATATATAATAAGTATTTTTA+AGG | - | chr8_3:26301095-26301114 | Msa1284240:intron | 5.0% |
| TAAACAAAGGGAGGAGGAGG+AGG | - | chr8_3:26298891-26298910 | Msa1284240:intron | 50.0% | |
| ATAATGAGAAGTGGGTGGGG+TGG | - | chr8_3:26299276-26299295 | Msa1284240:intron | 50.0% | |
| TAATGAGAAGTGGGTGGGGT+GGG | - | chr8_3:26299277-26299296 | Msa1284240:intron | 50.0% | |
| CAGTGCTTTCTCTTGGAGCA+TGG | - | chr8_3:26299784-26299803 | Msa1284240:CDS | 50.0% | |
| CATAGTGGCTGTGCAGTTTG+TGG | - | chr8_3:26300626-26300645 | Msa1284240:intron | 50.0% | |
| ATAAGCAAGAAAGTGGGCCC+AGG | - | chr8_3:26300947-26300966 | Msa1284240:intron | 50.0% | |
| TAAGCAAGAAAGTGGGCCCA+GGG | - | chr8_3:26300948-26300967 | Msa1284240:intron | 50.0% | |
| GCCTCAAAATCCAGATGAGG+TGG | - | chr8_3:26302215-26302234 | Msa1284240:intron | 50.0% | |
| CATAAGTCGATGACACGTGG+CGG | + | chr8_3:26302683-26302702 | None:intergenic | 50.0% | |
| TGGAAACTGGAGTAGCAGAG+AGG | - | chr8_3:26303122-26303141 | Msa1284240:intron | 50.0% | |
| CAGTGTCATGTCAGGGATGT+CGG | + | chr8_3:26303284-26303303 | None:intergenic | 50.0% | |
| CACGTGTCAGTGTCATGTCA+GGG | + | chr8_3:26303291-26303310 | None:intergenic | 50.0% | |
| ATCCAAGGCTGCTGTTGTTG+AGG | - | chr8_3:26303622-26303641 | Msa1284240:intron | 50.0% | |
| TACCTCAACAACAGCAGCCT+TGG | + | chr8_3:26303627-26303646 | None:intergenic | 50.0% | |
| AAGGAGGTTCAAGGTTCGAC+CGG | + | chr8_3:26303816-26303835 | None:intergenic | 50.0% | |
| CGAACCTTGAACCTCCTTCT+AGG | - | chr8_3:26303818-26303837 | Msa1284240:intron | 50.0% | |
| CCACACTGAAACCTAGAAGG+AGG | + | chr8_3:26303832-26303851 | None:intergenic | 50.0% | |
| CCTCCTTCTAGGTTTCAGTG+TGG | - | chr8_3:26303829-26303848 | Msa1284240:intron | 50.0% | |
| ! | GTTACCTGGCTAGTCAAGGT+TGG | + | chr8_3:26304064-26304083 | None:intergenic | 50.0% |
| AAGGACATGGCCTTTGGTTG+TGG | - | chr8_3:26304300-26304319 | Msa1284240:CDS | 50.0% | |
| GGCCTTTGGTTGTGGACATA+TGG | - | chr8_3:26304308-26304327 | Msa1284240:CDS | 50.0% | |
| ATGCAGACTTGCAGAGAGTG+TGG | - | chr8_3:26304402-26304421 | Msa1284240:CDS | 50.0% | |
| ! | TGCAGACTTGCAGAGAGTGT+GGG | - | chr8_3:26304403-26304422 | Msa1284240:CDS | 50.0% |
| AATGAGAAGTGGGTGGGGTG+GGG | - | chr8_3:26299278-26299297 | Msa1284240:intron | 55.0% | |
| CCACGTGTCAGTGTCATGTC+AGG | + | chr8_3:26303292-26303311 | None:intergenic | 55.0% | |
| CCTGACATGACACTGACACG+TGG | - | chr8_3:26303289-26303308 | Msa1284240:intron | 55.0% | |
| ACAAAGGGAGGAGGAGGAGG+TGG | - | chr8_3:26298894-26298913 | Msa1284240:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 26298787 | 26304494 | 26298787 | ID=Msa1284240;Name=Msa1284240 |
| chr8_3 | mRNA | 26298787 | 26304494 | 26298787 | ID=Msa1284240-mRNA-1;Parent=Msa1284240;Name=Msa1284240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|14|0|513 |
| chr8_3 | exon | 26304229 | 26304494 | 26304229 | ID=Msa1284240-mRNA-1:exon:9168;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26303471 | 26303600 | 26303471 | ID=Msa1284240-mRNA-1:exon:9167;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26302585 | 26302784 | 26302585 | ID=Msa1284240-mRNA-1:exon:9166;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26301400 | 26301517 | 26301400 | ID=Msa1284240-mRNA-1:exon:9165;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300996 | 26301074 | 26300996 | ID=Msa1284240-mRNA-1:exon:9164;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300775 | 26300815 | 26300775 | ID=Msa1284240-mRNA-1:exon:9163;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300627 | 26300697 | 26300627 | ID=Msa1284240-mRNA-1:exon:9162;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300420 | 26300522 | 26300420 | ID=Msa1284240-mRNA-1:exon:9161;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300241 | 26300339 | 26300241 | ID=Msa1284240-mRNA-1:exon:9160;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26300104 | 26300166 | 26300104 | ID=Msa1284240-mRNA-1:exon:9159;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26299638 | 26299817 | 26299638 | ID=Msa1284240-mRNA-1:exon:9158;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26299203 | 26299250 | 26299203 | ID=Msa1284240-mRNA-1:exon:9157;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26298952 | 26299008 | 26298952 | ID=Msa1284240-mRNA-1:exon:9156;Parent=Msa1284240-mRNA-1 |
| chr8_3 | exon | 26298787 | 26298873 | 26298787 | ID=Msa1284240-mRNA-1:exon:9155;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26304229 | 26304494 | 26304229 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26303471 | 26303600 | 26303471 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26302585 | 26302784 | 26302585 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26301400 | 26301517 | 26301400 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300996 | 26301074 | 26300996 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300775 | 26300815 | 26300775 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300627 | 26300697 | 26300627 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300420 | 26300522 | 26300420 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300241 | 26300339 | 26300241 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26300104 | 26300166 | 26300104 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26299638 | 26299817 | 26299638 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26299203 | 26299250 | 26299203 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26298952 | 26299008 | 26298952 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| chr8_3 | CDS | 26298787 | 26298873 | 26298787 | ID=Msa1284240-mRNA-1:cds;Parent=Msa1284240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
