AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1455200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455200 MtrunA17_Chr7g0259291 95.345 580 26 1 1 579 1 580 0.0 1152
Msa1455200 MtrunA17_Chr7g0259401 85.818 275 12 2 131 404 1 249 1.88e-170 483
Msa1455200 MtrunA17_Chr7g0275471 35.140 572 338 14 5 564 11 561 8.46e-96 304
Msa1455200 MtrunA17_Chr8g0347381 33.275 574 349 14 5 567 11 561 1.81e-90 290
Msa1455200 MtrunA17_Chr8g0347421 34.031 573 346 15 5 567 11 561 1.08e-89 288
Msa1455200 MtrunA17_Chr5g0421331 30.944 572 365 12 4 568 19 567 1.29e-85 277
Msa1455200 MtrunA17_Chr8g0347391 32.286 573 356 13 5 567 18 568 2.62e-85 276
Msa1455200 MtrunA17_Chr2g0318991 31.229 586 352 15 11 568 20 582 1.55e-81 267
Msa1455200 MtrunA17_Chr5g0401641 30.329 577 371 12 5 568 21 579 5.42e-80 263
Msa1455200 MtrunA17_Chr1g0195771 30.175 570 371 11 5 558 54 612 9.50e-78 258
Msa1455200 MtrunA17_Chr4g0023301 31.070 486 313 9 91 567 9 481 6.38e-77 252
Msa1455200 MtrunA17_Chr8g0361551 30.360 583 370 14 4 567 14 579 7.24e-77 255
Msa1455200 MtrunA17_Chr4g0022401 31.785 409 255 11 5 396 19 420 9.98e-68 226
Msa1455200 MtrunA17_Chr8g0347431 33.508 382 232 8 183 558 11 376 4.98e-64 215
Msa1455200 MtrunA17_Chr5g0401631 32.979 376 233 6 197 568 1 361 1.22e-62 211
Msa1455200 MtrunA17_Chr8g0352391 28.763 299 150 7 265 558 7 247 2.26e-26 108
Msa1455200 MtrunA17_Chr1g0169871 36.628 172 100 3 315 481 138 305 2.41e-25 107
Msa1455200 MtrunA17_Chr8g0352401 36.220 127 77 2 5 131 2 124 4.57e-19 83.6
Msa1455200 MtrunA17_Chr8g0347441 40.000 105 61 1 5 109 11 113 5.61e-16 74.7
Msa1455200 MtrunA17_Chr4g0022391 29.730 185 108 6 397 574 11 180 1.32e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455200 AT1G59500.1 31.937 573 368 12 3 568 19 576 2.92e-93 298
Msa1455200 AT1G28130.1 30.465 581 377 9 8 568 14 587 1.48e-92 296
Msa1455200 AT1G23160.1 32.297 579 351 14 8 569 15 569 3.71e-90 289
Msa1455200 AT1G48660.1 32.642 579 355 12 8 574 7 562 7.77e-90 288
Msa1455200 AT1G48660.2 32.586 580 357 13 8 574 7 565 1.11e-89 288
Msa1455200 AT5G13320.3 31.754 570 362 12 9 568 13 565 1.33e-88 285
Msa1455200 AT5G13320.1 31.754 570 362 12 9 568 13 565 1.33e-88 285
Msa1455200 AT5G13320.2 31.754 570 362 12 9 568 28 580 2.86e-88 285
Msa1455200 AT4G37390.1 30.862 580 369 13 4 568 20 582 3.26e-86 280
Msa1455200 AT4G03400.2 31.857 587 358 14 5 567 9 577 5.03e-86 279
Msa1455200 AT4G03400.1 31.857 587 358 14 5 567 9 577 5.03e-86 279
Msa1455200 AT2G23170.1 30.957 575 368 13 4 568 19 574 1.33e-85 278
Msa1455200 AT5G13360.1 32.281 570 358 14 11 568 17 570 2.05e-85 277
Msa1455200 AT5G13360.2 32.281 570 358 14 11 568 17 570 2.05e-85 277
Msa1455200 AT5G13360.3 32.281 570 358 14 11 568 95 648 1.30e-84 277
Msa1455200 AT2G14960.1 30.435 575 365 12 4 568 19 568 9.47e-84 273
Msa1455200 AT2G46370.1 32.348 575 354 16 5 567 11 562 1.45e-83 272
Msa1455200 AT2G46370.2 32.348 575 354 16 5 567 11 562 1.45e-83 272
Msa1455200 AT2G46370.4 32.348 575 354 16 5 567 22 573 2.27e-83 272
Msa1455200 AT5G51470.1 31.986 569 356 13 11 569 16 563 2.70e-83 271
Msa1455200 AT5G13370.1 31.524 571 362 11 11 568 17 571 1.45e-82 270
Msa1455200 AT4G27260.1 31.606 579 360 13 8 567 25 586 3.16e-81 267
Msa1455200 AT5G13350.1 30.648 571 367 12 11 568 17 571 9.14e-80 262
Msa1455200 AT5G13350.2 30.648 571 367 12 11 568 17 571 9.14e-80 262
Msa1455200 AT5G54510.1 30.915 579 364 13 8 567 25 586 1.45e-79 263
Msa1455200 AT2G47750.1 31.588 573 355 17 5 561 9 560 2.31e-77 256
Msa1455200 AT5G13380.1 30.634 568 370 11 11 568 47 600 1.93e-76 254
Msa1455200 AT1G28130.2 32.266 406 254 5 181 568 42 444 1.10e-73 243
Msa1455200 AT1G48670.1 29.879 579 336 12 1 574 1 514 3.99e-72 240
Msa1455200 AT2G46370.3 32.213 506 310 14 72 567 1 483 6.42e-72 239
Msa1455200 AT5G51470.2 31.493 489 311 10 89 569 1 473 2.94e-71 237
Msa1455200 AT1G48670.2 33.666 401 250 6 179 574 14 403 7.21e-71 234

Find 120 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAAGCTGCCTCCTTTCT+TGG 0.216718 tig0035604:+20706 Msa1455200:CDS
TACAACTAAACGTGGCTTAA+AGG 0.223574 tig0035604:+20932 Msa1455200:CDS
TCATGATTCCTTATAATCTT+TGG 0.243867 tig0035604:-22139 None:intergenic
CTCTTCTCTGCTTCTTCTAT+AGG 0.284728 tig0035604:+20363 Msa1455200:CDS
TTTCGATCAGTTATCAGATT+TGG 0.291888 tig0035604:+22078 Msa1455200:CDS
AGTCCCCTGGAAGTTATAAT+TGG 0.292019 tig0035604:+21023 Msa1455200:CDS
CGCTCAATCCTTCAACATAA+TGG 0.298742 tig0035604:+20182 Msa1455200:CDS
TGTTGAGTTTGCAAGTTTCT+TGG 0.299538 tig0035604:+21853 Msa1455200:CDS
TCCTCTCTTGAGAATGGTTT+AGG 0.317132 tig0035604:+21983 Msa1455200:CDS
TCAAAGTAAGGGATCAGTTT+TGG 0.319994 tig0035604:-20673 None:intergenic
CATAGGATCTTGTTTACATT+TGG 0.326061 tig0035604:-20882 None:intergenic
AGTTTGTGAAGGTAAGAATT+GGG 0.327806 tig0035604:+21301 Msa1455200:CDS
ATAAGCCACCAAAGATTATA+AGG 0.328611 tig0035604:+22131 Msa1455200:CDS
TCATGAAGTTGTCAAGTTCT+TGG 0.335217 tig0035604:+22156 Msa1455200:CDS
ATAAATACCTTCAACTGCTT+TGG 0.348086 tig0035604:-21890 None:intergenic
TAGATCCAATTATAACTTCC+AGG 0.355197 tig0035604:-21028 None:intergenic
AGGAATCTTGATGTTATAGA+TGG 0.357105 tig0035604:+21092 Msa1455200:CDS
ATCTTGTTTACATTTGGCCT+TGG 0.360685 tig0035604:-20876 None:intergenic
TACAAGGTGCAGAGAGAAAA+AGG 0.360703 tig0035604:+22013 Msa1455200:CDS
GGCGATATAGTTAGAGTTGT+TGG 0.370089 tig0035604:+21683 Msa1455200:CDS
GAAAGGCTTGAATCAAAGTA+AGG 0.381997 tig0035604:-20685 None:intergenic
GTTTGCAAGTTTCTTGGATC+AGG 0.392810 tig0035604:+21859 Msa1455200:CDS
TCATCTGAAATTTCATGACT+TGG 0.392995 tig0035604:-21209 None:intergenic
GCCACCTTCTCTGTGGCCTT+AGG 0.400497 tig0035604:+21072 Msa1455200:CDS
TAGTTTGTGAAGGTAAGAAT+TGG 0.402669 tig0035604:+21300 Msa1455200:CDS
TCATTCTCATTCATCTCAAA+TGG 0.405812 tig0035604:-21554 None:intergenic
TCTTCATACTCTTTACAAAC+TGG 0.413261 tig0035604:+20966 Msa1455200:CDS
TACACATAGCTGCTCCCATT+TGG 0.419597 tig0035604:-21168 None:intergenic
CATGTTCTCCATCAGCCATC+TGG 0.419650 tig0035604:-20313 None:intergenic
TGTATTTCCTCTCTTGAGAA+TGG 0.427898 tig0035604:+21977 Msa1455200:CDS
TAGTACGAACCGTGTTGTCT+CGG 0.428215 tig0035604:-21501 None:intergenic
TTGTTTACATTTGGCCTTGG+AGG 0.432776 tig0035604:-20873 None:intergenic
TAACAGAACCATTATGTTGA+AGG 0.435178 tig0035604:-20190 None:intergenic
GGTGGCTTATATTGACTAGC+TGG 0.437086 tig0035604:-22118 None:intergenic
TAAACGTGGCTTAAAGGTTA+TGG 0.437413 tig0035604:+20938 Msa1455200:CDS
AGTTCATCATCTGTCATCAT+TGG 0.437707 tig0035604:-20101 None:intergenic
TTTATCAAGTGCGTTACAAC+AGG 0.439169 tig0035604:+21359 Msa1455200:CDS
AAAGTCAACGTAATCATCAT+AGG 0.442906 tig0035604:-20285 None:intergenic
ATAGATTGTTTCCGAATGTT+CGG 0.446193 tig0035604:+21336 Msa1455200:CDS
TGATTCCTTATAATCTTTGG+TGG 0.451928 tig0035604:-22136 None:intergenic
TTAATCAAACCTATGGCATA+AGG 0.457001 tig0035604:-21125 None:intergenic
AGTCTAATAACTTGAAGGAA+TGG 0.458645 tig0035604:+21936 Msa1455200:CDS
TTTGCTTCTGAGTGTTGTGT+AGG 0.460989 tig0035604:+21452 Msa1455200:CDS
AATTTCCATCTTGCACTAAG+AGG 0.462310 tig0035604:+21803 Msa1455200:CDS
TCCTACAATCGGTACATCTC+CGG 0.465120 tig0035604:-21420 None:intergenic
GAAGCTGTAATCAACACTAT+TGG 0.466393 tig0035604:+21242 Msa1455200:CDS
GTCTAATAACTTGAAGGAAT+GGG 0.466720 tig0035604:+21937 Msa1455200:CDS
ACCTTCAACTGCTTTGGCAT+CGG 0.468257 tig0035604:-21884 None:intergenic
AGTACGAACCGTGTTGTCTC+GGG 0.470826 tig0035604:-21500 None:intergenic
GATCGAAAGCTCCTTGCCTT+AGG 0.471571 tig0035604:-22063 None:intergenic
GAAGGTATTTATAGAAGTAG+AGG 0.481000 tig0035604:+21901 Msa1455200:CDS
CACTTGATAAACCGAACATT+CGG 0.481170 tig0035604:-21347 None:intergenic
AAATGCTTTAATCAAACCTA+TGG 0.485080 tig0035604:-21132 None:intergenic
ATTAGTACTCCTTATGCCAT+AGG 0.485763 tig0035604:+21116 Msa1455200:CDS
GTTTGTGAAGGTAAGAATTG+GGG 0.497604 tig0035604:+21302 Msa1455200:CDS
CAAATGTAAACAAGATCCTA+TGG 0.504271 tig0035604:+20883 Msa1455200:CDS
ACAGCCTCGGTGACCAAGAA+AGG 0.505851 tig0035604:-20719 None:intergenic
GATCTTTGCGGCGTTGAGGT+TGG 0.507445 tig0035604:+21605 Msa1455200:CDS
ACCGATGCCAAAGCAGTTGA+AGG 0.508276 tig0035604:+21883 Msa1455200:CDS
GCCGGAGATGTACCGATTGT+AGG 0.513506 tig0035604:+21419 Msa1455200:CDS
ACAAGACTTGTGAAAGAAGC+AGG 0.515362 tig0035604:-20251 None:intergenic
GAGAATGATGAGGATGTTGT+TGG 0.515858 tig0035604:+21569 Msa1455200:CDS
TTGAGCGAAGAGTTTCCAAC+TGG 0.520470 tig0035604:-20166 None:intergenic
AAGTAATCTCCTCCTACAAT+CGG 0.525370 tig0035604:-21431 None:intergenic
AGAGGAGTCTAATAACTTGA+AGG 0.526734 tig0035604:+21931 Msa1455200:CDS
TGCAACGTTCTCTAGTCCCC+TGG 0.529657 tig0035604:+21010 Msa1455200:CDS
ATACTCTTTACAAACTGGTA+AGG 0.530086 tig0035604:+20971 Msa1455200:CDS
AGAATCTCAGCTGAAGACTT+AGG 0.531876 tig0035604:-21749 None:intergenic
AGAAGTAGAGGAAGTTCAAG+AGG 0.534240 tig0035604:+21913 Msa1455200:CDS
CTATTTGACAATTCATGTTG+AGG 0.536323 tig0035604:-21269 None:intergenic
CAACTTGAGGTGATGAATTG+TGG 0.539457 tig0035604:-21709 None:intergenic
TTTATCCACCAGATGGCTGA+TGG 0.540871 tig0035604:+20305 Msa1455200:CDS
AGAATAAGATTAGTTTGTGA+AGG 0.542973 tig0035604:+21290 Msa1455200:CDS
GAGAAAACAGTGGATCTTTG+CGG 0.544535 tig0035604:+21593 Msa1455200:CDS
GAGAACGTTGCAAGTTGTTG+AGG 0.552779 tig0035604:-20999 None:intergenic
AGATCCAATTATAACTTCCA+GGG 0.558522 tig0035604:-21027 None:intergenic
CTTGCACTAAGAGGTGCTAC+GGG 0.560278 tig0035604:+21812 Msa1455200:CDS
TCTTGCACTAAGAGGTGCTA+CGG 0.561894 tig0035604:+21811 Msa1455200:CDS
TGTGAAGGTAAGAATTGGGG+TGG 0.563626 tig0035604:+21305 Msa1455200:CDS
AAATGGAAGAAACTCAAAGT+AGG 0.564938 tig0035604:-21537 None:intergenic
AGTTATAATTGGATCTAATG+TGG 0.566485 tig0035604:+21034 Msa1455200:CDS
AACTCAAAGTAGGCAAAAGT+AGG 0.567325 tig0035604:-21527 None:intergenic
CGTTGACTTTATCCACCAGA+TGG 0.567543 tig0035604:+20298 Msa1455200:CDS
GTTCTCCATCAGCCATCTGG+TGG 0.567675 tig0035604:-20310 None:intergenic
AAGTCATGAAATTTCAGATG+AGG 0.571087 tig0035604:+21211 Msa1455200:CDS
GCTGTATCGCTGTTCTTCAA+AGG 0.571437 tig0035604:+20737 Msa1455200:CDS
AGTGGATCTTTGCGGCGTTG+AGG 0.572967 tig0035604:+21601 Msa1455200:CDS
TAGCACCTCTTAGTGCAAGA+TGG 0.573998 tig0035604:-21808 None:intergenic
TGGTTTAGGAGCATTGTACA+AGG 0.576214 tig0035604:+21997 Msa1455200:CDS
CTCATAACAAATTCAACTTG+AGG 0.577362 tig0035604:-21722 None:intergenic
GATTCCTAAGGCCACAGAGA+AGG 0.577447 tig0035604:-21076 None:intergenic
ACTTAATGATAATTATCCTA+AGG 0.579665 tig0035604:+22047 Msa1455200:CDS
ATGATAATTATCCTAAGGCA+AGG 0.584299 tig0035604:+22052 Msa1455200:CDS
GCTGTAATCAACACTATTGG+TGG 0.584574 tig0035604:+21245 Msa1455200:CDS
AAAGGCTTGAATCAAAGTAA+GGG 0.587333 tig0035604:-20684 None:intergenic
TCCTAAGGCCACAGAGAAGG+TGG 0.588668 tig0035604:-21073 None:intergenic
CTATAGAAGAAGCAGAGAAG+AGG 0.590382 tig0035604:-20362 None:intergenic
CTATGTGTAGATCTTGATTG+TGG 0.591963 tig0035604:+21182 Msa1455200:CDS
TCCTAAACCATTCTCAAGAG+AGG 0.592651 tig0035604:-21984 None:intergenic
CTATAACATCAAGATTCCTA+AGG 0.593541 tig0035604:-21088 None:intergenic
GAAGAACAGCGATACAGCCT+CGG 0.604012 tig0035604:-20732 None:intergenic
GGATGCAAAACATCACCAGT+TGG 0.610098 tig0035604:+20151 Msa1455200:CDS
GGAGATGTACCGATTGTAGG+AGG 0.617561 tig0035604:+21422 Msa1455200:CDS
GATGCAGGATGTTTCCTCCA+AGG 0.619465 tig0035604:+20859 Msa1455200:intron
ACGAACCGTGTTGTCTCGGG+TGG 0.628593 tig0035604:-21497 None:intergenic
TGTCAGCGTAGAGAAACCAT+AGG 0.638254 tig0035604:-20899 None:intergenic
CACAACCACCCGAGACAACA+CGG 0.644768 tig0035604:+21492 Msa1455200:CDS
GATCCAATTATAACTTCCAG+GGG 0.646433 tig0035604:-21026 None:intergenic
GCCTCCTTTCTTGGTCACCG+AGG 0.653577 tig0035604:+20715 Msa1455200:CDS
GGTTGGAAAGATGTATGAAG+TGG 0.655471 tig0035604:+21622 Msa1455200:CDS
AGTTTGTAAAGAGTATGAAG+AGG 0.658887 tig0035604:-20964 None:intergenic
ATTACTACTACAACTAAACG+TGG 0.671461 tig0035604:+20924 Msa1455200:CDS
TAATCATCATAGGAAGACAA+AGG 0.675878 tig0035604:-20275 None:intergenic
GAAGCTAGAAGAGTTGACAA+TGG 0.676230 tig0035604:+20130 Msa1455200:CDS
ATGTATTGCCACCTTCTCTG+TGG 0.676460 tig0035604:+21065 Msa1455200:CDS
GCCTCGGTGACCAAGAAAGG+AGG 0.681075 tig0035604:-20716 None:intergenic
ATTTGTATCGATAAAATCCG+CGG 0.690641 tig0035604:-21658 None:intergenic
TGAGATGAATGAGAATGATG+AGG 0.693524 tig0035604:+21559 Msa1455200:CDS
GTGGTTGTTACTACTTACCG+CGG 0.726364 tig0035604:+21641 Msa1455200:CDS
TGTTGTTGGTGAGAAAACAG+TGG 0.738329 tig0035604:+21583 Msa1455200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTGTTTATAAATTAT+AGG - tig0035604:20557-20576 None:intergenic 10.0%
!!! CAATTTTGTTTATAAATTAT+AGG - tig0035604:20557-20576 None:intergenic 10.0%
!!! AATGCAATTTCATTAATTTT+AGG + tig0035604:20515-20534 Msa1455200:intron 15.0%
!!! AATGCAATTTCATTAATTTT+AGG + tig0035604:20515-20534 Msa1455200:intron 15.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG + tig0035604:20408-20427 Msa1455200:intron 20.0%
!!! TTTGTTATAGGAGAATTTAT+TGG + tig0035604:20432-20451 Msa1455200:intron 20.0%
!! TCAATGATTTAGATCAAAAA+GGG - tig0035604:20474-20493 None:intergenic 20.0%
!!! AAATTGCATTTTTAATGCAA+AGG - tig0035604:20505-20524 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG + tig0035604:21142-21161 Msa1455200:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG + tig0035604:22047-22066 Msa1455200:CDS 20.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG + tig0035604:20408-20427 Msa1455200:intron 20.0%
!!! TTTGTTATAGGAGAATTTAT+TGG + tig0035604:20432-20451 Msa1455200:intron 20.0%
!! TCAATGATTTAGATCAAAAA+GGG - tig0035604:20474-20493 None:intergenic 20.0%
!!! AAATTGCATTTTTAATGCAA+AGG - tig0035604:20505-20524 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG + tig0035604:21142-21161 Msa1455200:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG + tig0035604:22047-22066 Msa1455200:CDS 20.0%
!!! AACACTTTTGTTATTGTTGA+AGG - tig0035604:20228-20247 None:intergenic 25.0%
! TTGAAATGAAGAGTTAAAAG+TGG - tig0035604:20394-20413 None:intergenic 25.0%
! GTCAATGATTTAGATCAAAA+AGG - tig0035604:20475-20494 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG - tig0035604:20800-20819 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG + tig0035604:21034-21053 Msa1455200:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG - tig0035604:21135-21154 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG + tig0035604:21290-21309 Msa1455200:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG + tig0035604:21401-21420 Msa1455200:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG + tig0035604:21662-21681 Msa1455200:CDS 25.0%
! TCATGATTCCTTATAATCTT+TGG - tig0035604:22142-22161 None:intergenic 25.0%
!!! TGCTTTTATTAGAGTATCAA+TGG + tig0035604:22186-22205 Msa1455200:CDS 25.0%
!!! AACACTTTTGTTATTGTTGA+AGG - tig0035604:20228-20247 None:intergenic 25.0%
! TTGAAATGAAGAGTTAAAAG+TGG - tig0035604:20394-20413 None:intergenic 25.0%
! GTCAATGATTTAGATCAAAA+AGG - tig0035604:20475-20494 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG - tig0035604:20800-20819 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG + tig0035604:21034-21053 Msa1455200:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG - tig0035604:21135-21154 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG + tig0035604:21290-21309 Msa1455200:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG + tig0035604:21401-21420 Msa1455200:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG + tig0035604:21662-21681 Msa1455200:CDS 25.0%
! TCATGATTCCTTATAATCTT+TGG - tig0035604:22142-22161 None:intergenic 25.0%
!!! TGCTTTTATTAGAGTATCAA+TGG + tig0035604:22186-22205 Msa1455200:CDS 25.0%
TAACAGAACCATTATGTTGA+AGG - tig0035604:20193-20212 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG - tig0035604:20278-20297 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG - tig0035604:20288-20307 None:intergenic 30.0%
!!! CTTTTTCTAGGCTTTGTTAT+AGG + tig0035604:20420-20439 Msa1455200:intron 30.0%
! TTTTTAATGCAAAGGTGATG+AGG - tig0035604:20497-20516 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG - tig0035604:20687-20706 None:intergenic 30.0%
! CATAGGATCTTGTTTACATT+TGG - tig0035604:20885-20904 None:intergenic 30.0%
CAAATGTAAACAAGATCCTA+TGG + tig0035604:20883-20902 Msa1455200:CDS 30.0%
ATTACTACTACAACTAAACG+TGG + tig0035604:20924-20943 Msa1455200:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG - tig0035604:20967-20986 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG + tig0035604:20966-20985 Msa1455200:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG + tig0035604:20971-20990 Msa1455200:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG - tig0035604:21030-21049 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG - tig0035604:21031-21050 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG - tig0035604:21091-21110 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG + tig0035604:21092-21111 Msa1455200:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG - tig0035604:21128-21147 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG + tig0035604:21153-21172 Msa1455200:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG + tig0035604:21154-21173 Msa1455200:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG - tig0035604:21212-21231 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG + tig0035604:21211-21230 Msa1455200:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG - tig0035604:21272-21291 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG + tig0035604:21300-21319 Msa1455200:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG + tig0035604:21301-21320 Msa1455200:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG + tig0035604:21336-21355 Msa1455200:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG - tig0035604:21540-21559 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG - tig0035604:21557-21576 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG - tig0035604:21661-21680 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG + tig0035604:21661-21680 Msa1455200:CDS 30.0%
CTCATAACAAATTCAACTTG+AGG - tig0035604:21725-21744 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG - tig0035604:21893-21912 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG + tig0035604:21901-21920 Msa1455200:CDS 30.0%
AGTCTAATAACTTGAAGGAA+TGG + tig0035604:21936-21955 Msa1455200:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG + tig0035604:21937-21956 Msa1455200:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG + tig0035604:22023-22042 Msa1455200:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG + tig0035604:22052-22071 Msa1455200:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG + tig0035604:22078-22097 Msa1455200:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG + tig0035604:22091-22110 Msa1455200:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG + tig0035604:22131-22150 Msa1455200:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG - tig0035604:22139-22158 None:intergenic 30.0%
TAACAGAACCATTATGTTGA+AGG - tig0035604:20193-20212 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG - tig0035604:20278-20297 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG - tig0035604:20288-20307 None:intergenic 30.0%
!!! CTTTTTCTAGGCTTTGTTAT+AGG + tig0035604:20420-20439 Msa1455200:intron 30.0%
! TTTTTAATGCAAAGGTGATG+AGG - tig0035604:20497-20516 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG - tig0035604:20687-20706 None:intergenic 30.0%
! CATAGGATCTTGTTTACATT+TGG - tig0035604:20885-20904 None:intergenic 30.0%
CAAATGTAAACAAGATCCTA+TGG + tig0035604:20883-20902 Msa1455200:CDS 30.0%
ATTACTACTACAACTAAACG+TGG + tig0035604:20924-20943 Msa1455200:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG - tig0035604:20967-20986 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG + tig0035604:20966-20985 Msa1455200:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG + tig0035604:20971-20990 Msa1455200:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG - tig0035604:21030-21049 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG - tig0035604:21031-21050 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG - tig0035604:21091-21110 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG + tig0035604:21092-21111 Msa1455200:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG - tig0035604:21128-21147 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG + tig0035604:21153-21172 Msa1455200:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG + tig0035604:21154-21173 Msa1455200:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG - tig0035604:21212-21231 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG + tig0035604:21211-21230 Msa1455200:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG - tig0035604:21272-21291 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG + tig0035604:21300-21319 Msa1455200:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG + tig0035604:21301-21320 Msa1455200:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG + tig0035604:21336-21355 Msa1455200:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG - tig0035604:21540-21559 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG - tig0035604:21557-21576 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG - tig0035604:21661-21680 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG + tig0035604:21661-21680 Msa1455200:CDS 30.0%
CTCATAACAAATTCAACTTG+AGG - tig0035604:21725-21744 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG - tig0035604:21893-21912 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG + tig0035604:21901-21920 Msa1455200:CDS 30.0%
AGTCTAATAACTTGAAGGAA+TGG + tig0035604:21936-21955 Msa1455200:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG + tig0035604:21937-21956 Msa1455200:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG + tig0035604:22023-22042 Msa1455200:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG + tig0035604:22052-22071 Msa1455200:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG + tig0035604:22078-22097 Msa1455200:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG + tig0035604:22091-22110 Msa1455200:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG + tig0035604:22131-22150 Msa1455200:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG - tig0035604:22139-22158 None:intergenic 30.0%
TTACTCTGATGTGATTGTGA+TGG + tig0035604:20582-20601 Msa1455200:intron 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG - tig0035604:20676-20695 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG - tig0035604:20688-20707 None:intergenic 35.0%
! ATCTTGTTTACATTTGGCCT+TGG - tig0035604:20879-20898 None:intergenic 35.0%
TACAACTAAACGTGGCTTAA+AGG + tig0035604:20932-20951 Msa1455200:CDS 35.0%
TAAACGTGGCTTAAAGGTTA+TGG + tig0035604:20938-20957 Msa1455200:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG - tig0035604:21029-21048 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG + tig0035604:21116-21135 Msa1455200:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG + tig0035604:21182-21201 Msa1455200:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG + tig0035604:21242-21261 Msa1455200:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG + tig0035604:21302-21321 Msa1455200:CDS 35.0%
CACTTGATAAACCGAACATT+CGG - tig0035604:21350-21369 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG + tig0035604:21359-21378 Msa1455200:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG - tig0035604:21434-21453 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG - tig0035604:21530-21549 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG + tig0035604:21559-21578 Msa1455200:CDS 35.0%
AATTTCCATCTTGCACTAAG+AGG + tig0035604:21803-21822 Msa1455200:CDS 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG + tig0035604:21853-21872 Msa1455200:CDS 35.0%
AGAGGAGTCTAATAACTTGA+AGG + tig0035604:21931-21950 Msa1455200:CDS 35.0%
TGTATTTCCTCTCTTGAGAA+TGG + tig0035604:21977-21996 Msa1455200:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG + tig0035604:22156-22175 Msa1455200:CDS 35.0%
TTACTCTGATGTGATTGTGA+TGG + tig0035604:20582-20601 Msa1455200:intron 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG - tig0035604:20676-20695 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG - tig0035604:20688-20707 None:intergenic 35.0%
! ATCTTGTTTACATTTGGCCT+TGG - tig0035604:20879-20898 None:intergenic 35.0%
TACAACTAAACGTGGCTTAA+AGG + tig0035604:20932-20951 Msa1455200:CDS 35.0%
TAAACGTGGCTTAAAGGTTA+TGG + tig0035604:20938-20957 Msa1455200:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG - tig0035604:21029-21048 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG + tig0035604:21116-21135 Msa1455200:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG + tig0035604:21182-21201 Msa1455200:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG + tig0035604:21242-21261 Msa1455200:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG + tig0035604:21302-21321 Msa1455200:CDS 35.0%
CACTTGATAAACCGAACATT+CGG - tig0035604:21350-21369 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG + tig0035604:21359-21378 Msa1455200:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG - tig0035604:21434-21453 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG - tig0035604:21530-21549 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG + tig0035604:21559-21578 Msa1455200:CDS 35.0%
AATTTCCATCTTGCACTAAG+AGG + tig0035604:21803-21822 Msa1455200:CDS 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG + tig0035604:21853-21872 Msa1455200:CDS 35.0%
AGAGGAGTCTAATAACTTGA+AGG + tig0035604:21931-21950 Msa1455200:CDS 35.0%
TGTATTTCCTCTCTTGAGAA+TGG + tig0035604:21977-21996 Msa1455200:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG + tig0035604:22156-22175 Msa1455200:CDS 35.0%
GAAGCTAGAAGAGTTGACAA+TGG + tig0035604:20130-20149 Msa1455200:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG + tig0035604:20182-20201 Msa1455200:CDS 40.0%
ACAAGACTTGTGAAAGAAGC+AGG - tig0035604:20254-20273 None:intergenic 40.0%
CTATAGAAGAAGCAGAGAAG+AGG - tig0035604:20365-20384 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG + tig0035604:20363-20382 Msa1455200:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+TGG - tig0035604:20665-20684 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG - tig0035604:20668-20687 None:intergenic 40.0%
! ATTTGAAACCTCCATGATGC+AGG + tig0035604:20844-20863 Msa1455200:intron 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG - tig0035604:20876-20895 None:intergenic 40.0%
AGTCCCCTGGAAGTTATAAT+TGG + tig0035604:21023-21042 Msa1455200:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG + tig0035604:21245-21264 Msa1455200:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG + tig0035604:21452-21471 Msa1455200:CDS 40.0%
GAGAATGATGAGGATGTTGT+TGG + tig0035604:21569-21588 Msa1455200:CDS 40.0%
! TGTTGTTGGTGAGAAAACAG+TGG + tig0035604:21583-21602 Msa1455200:CDS 40.0%
GAGAAAACAGTGGATCTTTG+CGG + tig0035604:21593-21612 Msa1455200:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG + tig0035604:21622-21641 Msa1455200:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG + tig0035604:21683-21702 Msa1455200:CDS 40.0%
CAACTTGAGGTGATGAATTG+TGG - tig0035604:21712-21731 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG - tig0035604:21752-21771 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG + tig0035604:21859-21878 Msa1455200:CDS 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG + tig0035604:21913-21932 Msa1455200:CDS 40.0%
TCCTCTCTTGAGAATGGTTT+AGG + tig0035604:21983-22002 Msa1455200:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG - tig0035604:21987-22006 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG + tig0035604:21997-22016 Msa1455200:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG + tig0035604:22013-22032 Msa1455200:CDS 40.0%
GAAGCTAGAAGAGTTGACAA+TGG + tig0035604:20130-20149 Msa1455200:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG + tig0035604:20182-20201 Msa1455200:CDS 40.0%
ACAAGACTTGTGAAAGAAGC+AGG - tig0035604:20254-20273 None:intergenic 40.0%
CTATAGAAGAAGCAGAGAAG+AGG - tig0035604:20365-20384 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG + tig0035604:20363-20382 Msa1455200:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+TGG - tig0035604:20665-20684 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG - tig0035604:20668-20687 None:intergenic 40.0%
! ATTTGAAACCTCCATGATGC+AGG + tig0035604:20844-20863 Msa1455200:intron 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG - tig0035604:20876-20895 None:intergenic 40.0%
AGTCCCCTGGAAGTTATAAT+TGG + tig0035604:21023-21042 Msa1455200:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG + tig0035604:21245-21264 Msa1455200:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG + tig0035604:21452-21471 Msa1455200:CDS 40.0%
GAGAATGATGAGGATGTTGT+TGG + tig0035604:21569-21588 Msa1455200:CDS 40.0%
! TGTTGTTGGTGAGAAAACAG+TGG + tig0035604:21583-21602 Msa1455200:CDS 40.0%
GAGAAAACAGTGGATCTTTG+CGG + tig0035604:21593-21612 Msa1455200:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG + tig0035604:21622-21641 Msa1455200:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG + tig0035604:21683-21702 Msa1455200:CDS 40.0%
CAACTTGAGGTGATGAATTG+TGG - tig0035604:21712-21731 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG - tig0035604:21752-21771 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG + tig0035604:21859-21878 Msa1455200:CDS 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG + tig0035604:21913-21932 Msa1455200:CDS 40.0%
TCCTCTCTTGAGAATGGTTT+AGG + tig0035604:21983-22002 Msa1455200:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG - tig0035604:21987-22006 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG + tig0035604:21997-22016 Msa1455200:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG + tig0035604:22013-22032 Msa1455200:CDS 40.0%
GGATGCAAAACATCACCAGT+TGG + tig0035604:20151-20170 Msa1455200:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG - tig0035604:20169-20188 None:intergenic 45.0%
!! CGTTGACTTTATCCACCAGA+TGG + tig0035604:20298-20317 Msa1455200:CDS 45.0%
TTTATCCACCAGATGGCTGA+TGG + tig0035604:20305-20324 Msa1455200:CDS 45.0%
GACTTTGTCTTTCTCAGCTC+AGG + tig0035604:20634-20653 Msa1455200:intron 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG - tig0035604:20705-20724 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG + tig0035604:20706-20725 Msa1455200:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG + tig0035604:20737-20756 Msa1455200:CDS 45.0%
TGTCAGCGTAGAGAAACCAT+AGG - tig0035604:20902-20921 None:intergenic 45.0%
GAGAACGTTGCAAGTTGTTG+AGG - tig0035604:21002-21021 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG + tig0035604:21065-21084 Msa1455200:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG - tig0035604:21171-21190 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG + tig0035604:21305-21324 Msa1455200:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG - tig0035604:21423-21442 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG - tig0035604:21504-21523 None:intergenic 45.0%
GTGGTTGTTACTACTTACCG+CGG + tig0035604:21641-21660 Msa1455200:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG - tig0035604:21811-21830 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG + tig0035604:21811-21830 Msa1455200:CDS 45.0%
ACCTTCAACTGCTTTGGCAT+CGG - tig0035604:21887-21906 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG - tig0035604:22121-22140 None:intergenic 45.0%
GGATGCAAAACATCACCAGT+TGG + tig0035604:20151-20170 Msa1455200:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG - tig0035604:20169-20188 None:intergenic 45.0%
!! CGTTGACTTTATCCACCAGA+TGG + tig0035604:20298-20317 Msa1455200:CDS 45.0%
TTTATCCACCAGATGGCTGA+TGG + tig0035604:20305-20324 Msa1455200:CDS 45.0%
GACTTTGTCTTTCTCAGCTC+AGG + tig0035604:20634-20653 Msa1455200:intron 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG - tig0035604:20705-20724 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG + tig0035604:20706-20725 Msa1455200:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG + tig0035604:20737-20756 Msa1455200:CDS 45.0%
TGTCAGCGTAGAGAAACCAT+AGG - tig0035604:20902-20921 None:intergenic 45.0%
GAGAACGTTGCAAGTTGTTG+AGG - tig0035604:21002-21021 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG + tig0035604:21065-21084 Msa1455200:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG - tig0035604:21171-21190 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG + tig0035604:21305-21324 Msa1455200:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG - tig0035604:21423-21442 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG - tig0035604:21504-21523 None:intergenic 45.0%
GTGGTTGTTACTACTTACCG+CGG + tig0035604:21641-21660 Msa1455200:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG - tig0035604:21811-21830 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG + tig0035604:21811-21830 Msa1455200:CDS 45.0%
ACCTTCAACTGCTTTGGCAT+CGG - tig0035604:21887-21906 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG - tig0035604:22121-22140 None:intergenic 45.0%
CATGTTCTCCATCAGCCATC+TGG - tig0035604:20316-20335 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG - tig0035604:20735-20754 None:intergenic 50.0%
GGAAACATCCTGCATCATGG+AGG - tig0035604:20855-20874 None:intergenic 50.0%
GGAGGAAACATCCTGCATCA+TGG - tig0035604:20858-20877 None:intergenic 50.0%
GATGCAGGATGTTTCCTCCA+AGG + tig0035604:20859-20878 Msa1455200:intron 50.0%
GATTCCTAAGGCCACAGAGA+AGG - tig0035604:21079-21098 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG + tig0035604:21422-21441 Msa1455200:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG - tig0035604:21503-21522 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG + tig0035604:21812-21831 Msa1455200:CDS 50.0%
ACCGATGCCAAAGCAGTTGA+AGG + tig0035604:21883-21902 Msa1455200:CDS 50.0%
GATCGAAAGCTCCTTGCCTT+AGG - tig0035604:22066-22085 None:intergenic 50.0%
CATGTTCTCCATCAGCCATC+TGG - tig0035604:20316-20335 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG - tig0035604:20735-20754 None:intergenic 50.0%
GGAAACATCCTGCATCATGG+AGG - tig0035604:20855-20874 None:intergenic 50.0%
GGAGGAAACATCCTGCATCA+TGG - tig0035604:20858-20877 None:intergenic 50.0%
GATGCAGGATGTTTCCTCCA+AGG + tig0035604:20859-20878 Msa1455200:intron 50.0%
GATTCCTAAGGCCACAGAGA+AGG - tig0035604:21079-21098 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG + tig0035604:21422-21441 Msa1455200:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG - tig0035604:21503-21522 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG + tig0035604:21812-21831 Msa1455200:CDS 50.0%
ACCGATGCCAAAGCAGTTGA+AGG + tig0035604:21883-21902 Msa1455200:CDS 50.0%
GATCGAAAGCTCCTTGCCTT+AGG - tig0035604:22066-22085 None:intergenic 50.0%
GTTCTCCATCAGCCATCTGG+TGG - tig0035604:20313-20332 None:intergenic 55.0%
ACAGCCTCGGTGACCAAGAA+AGG - tig0035604:20722-20741 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG + tig0035604:21010-21029 Msa1455200:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG - tig0035604:21076-21095 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG + tig0035604:21419-21438 Msa1455200:CDS 55.0%
CACAACCACCCGAGACAACA+CGG + tig0035604:21492-21511 Msa1455200:CDS 55.0%
AGTGGATCTTTGCGGCGTTG+AGG + tig0035604:21601-21620 Msa1455200:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG + tig0035604:21605-21624 Msa1455200:CDS 55.0%
GTTCTCCATCAGCCATCTGG+TGG - tig0035604:20313-20332 None:intergenic 55.0%
ACAGCCTCGGTGACCAAGAA+AGG - tig0035604:20722-20741 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG + tig0035604:21010-21029 Msa1455200:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG - tig0035604:21076-21095 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG + tig0035604:21419-21438 Msa1455200:CDS 55.0%
CACAACCACCCGAGACAACA+CGG + tig0035604:21492-21511 Msa1455200:CDS 55.0%
AGTGGATCTTTGCGGCGTTG+AGG + tig0035604:21601-21620 Msa1455200:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG + tig0035604:21605-21624 Msa1455200:CDS 55.0%
GCCTCCTTTCTTGGTCACCG+AGG + tig0035604:20715-20734 Msa1455200:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG - tig0035604:20719-20738 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG + tig0035604:21072-21091 Msa1455200:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG - tig0035604:21500-21519 None:intergenic 60.0%
GCCTCCTTTCTTGGTCACCG+AGG + tig0035604:20715-20734 Msa1455200:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG - tig0035604:20719-20738 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG + tig0035604:21072-21091 Msa1455200:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG - tig0035604:21500-21519 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0035604 gene 20104 22216 20104 ID=Msa1455200;Name=Msa1455200
tig0035604 mRNA 20104 22216 20104 ID=Msa1455200-mRNA-1;Parent=Msa1455200;Name=Msa1455200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|579
tig0035604 exon 20104 20384 20104 ID=Msa1455200-mRNA-1:exon:20158;Parent=Msa1455200-mRNA-1
tig0035604 exon 20651 20758 20651 ID=Msa1455200-mRNA-1:exon:20159;Parent=Msa1455200-mRNA-1
tig0035604 exon 20866 22216 20866 ID=Msa1455200-mRNA-1:exon:20160;Parent=Msa1455200-mRNA-1
tig0035604 CDS 20104 20384 20104 ID=Msa1455200-mRNA-1:cds;Parent=Msa1455200-mRNA-1
tig0035604 CDS 20651 20758 20651 ID=Msa1455200-mRNA-1:cds;Parent=Msa1455200-mRNA-1
tig0035604 CDS 20866 22216 20866 ID=Msa1455200-mRNA-1:cds;Parent=Msa1455200-mRNA-1
Gene Sequence

>Msa1455200

ATGATGACAGATGATGAACTTATACAGAAGCTAGAAGAGTTGACAATGGATGCAAAACATCACCAGTTGGAAACTCTTCGCTCAATCCTTCAACATAATGGTTCTGTTAGATATCTTCAATCCTTCAACAATAACAAAAGTGTTGATCCTGCTTCTTTCACAAGTCTTGTTCCTTTGTCTTCCTATGATGATTACGTTGACTTTATCCACCAGATGGCTGATGGAGAACATGATCATCTTGATCTTCTCTCTGTTGATCCTCTTCTCTGCTTCTTCTATAGCTCAGGAACAACCACCATGAAACCAAAACTGATCCCTTACTTTGATTCAAGCCTTTCAAAAGCTGCCTCCTTTCTTGGTCACCGAGGCTGTATCGCTGTTCTTCAAAGGATGTTTCCTCCAAGGCCAAATGTAAACAAGATCCTATGGTTTCTCTACGCTGACAAAATTACTACTACAACTAAACGTGGCTTAAAGGTTATGGCAGCCTCTTCATACTCTTTACAAACTGGTAAGGTAACTCCTCAACAACTTGCAACGTTCTCTAGTCCCCTGGAAGTTATAATTGGATCTAATGTGGAACAACAAATGTATTGCCACCTTCTCTGTGGCCTTAGGAATCTTGATGTTATAGATGGAATTAGTACTCCTTATGCCATAGGTTTGATTAAAGCATTTAGTTTTTTGGAGTCCAAATGGGAGCAGCTATGTGTAGATCTTGATTGTGGATTTCCAAGTCATGAAATTTCAGATGAGGAAATGAGAGAAGCTGTAATCAACACTATTGGTGGTCCTCAACATGAATTGTCAAATAGAATAAGATTAGTTTGTGAAGGTAAGAATTGGGGTGGAATTGTACATAGATTGTTTCCGAATGTTCGGTTTATCAAGTGCGTTACAACAGGAAGCATGAAGCAGTACTATCAAAAACTTAAGTTTTATGCCGGAGATGTACCGATTGTAGGAGGAGATTACTTTGCTTCTGAGTGTTGTGTAGGTTTAAATTTAGACATAACACAACCACCCGAGACAACACGGTTCGTACTACTTCCTACTTTTGCCTACTTTGAGTTTCTTCCATTTGAGATGAATGAGAATGATGAGGATGTTGTTGGTGAGAAAACAGTGGATCTTTGCGGCGTTGAGGTTGGAAAGATGTATGAAGTGGTTGTTACTACTTACCGCGGATTTTATCGATACAAATTGGGCGATATAGTTAGAGTTGTTGGTTTCCACAATTCATCACCTCAAGTTGAATTTGTTATGAGAGCACCTAAGTCTTCAGCTGAGATTCTCAATGAGAAAGACTTGATTTCAGCAGTTGAAAATTTCCATCTTGCACTAAGAGGTGCTACGGGAATCAATTCAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAACCGATGCCAAAGCAGTTGAAGGTATTTATAGAAGTAGAGGAAGTTCAAGAGGAGTCTAATAACTTGAAGGAATGGGTTAAAGTGTTTAAAAGTTGTATTTCCTCTCTTGAGAATGGTTTAGGAGCATTGTACAAGGTGCAGAGAGAAAAAGGTCATATAAGGAACTTAATGATAATTATCCTAAGGCAAGGAGCTTTCGATCAGTTATCAGATTTGGCTTTTAAGAATGGAACACCAGCTAGTCAATATAAGCCACCAAAGATTATAAGGAATCATGAAGTTGTCAAGTTCTTGGAAAAGTTTGCTTTTATTAGAGTATCAATGGATGACTAA

Protein sequence

>Msa1455200

MMTDDELIQKLEELTMDAKHHQLETLRSILQHNGSVRYLQSFNNNKSVDPASFTSLVPLSSYDDYVDFIHQMADGEHDHLDLLSVDPLLCFFYSSGTTTMKPKLIPYFDSSLSKAASFLGHRGCIAVLQRMFPPRPNVNKILWFLYADKITTTTKRGLKVMAASSYSLQTGKVTPQQLATFSSPLEVIIGSNVEQQMYCHLLCGLRNLDVIDGISTPYAIGLIKAFSFLESKWEQLCVDLDCGFPSHEISDEEMREAVINTIGGPQHELSNRIRLVCEGKNWGGIVHRLFPNVRFIKCVTTGSMKQYYQKLKFYAGDVPIVGGDYFASECCVGLNLDITQPPETTRFVLLPTFAYFEFLPFEMNENDEDVVGEKTVDLCGVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPQVEFVMRAPKSSAEILNEKDLISAVENFHLALRGATGINSIEIVEFASFLDQEPMPKQLKVFIEVEEVQEESNNLKEWVKVFKSCISSLENGLGALYKVQREKGHIRNLMIIILRQGAFDQLSDLAFKNGTPASQYKPPKIIRNHEVVKFLEKFAFIRVSMDD*