AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1284880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1284880 MtrunA17_Chr8g0358201 75.650 423 47 7 1 373 1 417 0.0 566
Msa1284880 MtrunA17_Chr2g0292511 35.310 371 197 7 44 373 20 388 9.12e-58 192
Msa1284880 MtrunA17_Chr2g0286181 36.620 142 57 6 52 191 322 432 2.38e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1284880 AT1G56050.1 61.071 411 105 7 12 373 17 421 7.45e-155 442
Msa1284880 AT1G30580.1 34.483 377 192 8 44 373 20 388 2.32e-55 187

Find 92 sgRNAs with CRISPR-Local

Find 597 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTTGCCACATATATAA+TGG 0.237147 8_3:-28044659 None:intergenic
AGAACATTAGGCCAAGTATA+AGG 0.275730 8_3:-28050116 None:intergenic
TTGTTGCCATTGTTATAATA+AGG 0.284053 8_3:-28040427 None:intergenic
TCAAACAATGATTACGTTAC+AGG 0.291397 8_3:+28044706 Msa1284880:CDS
TTTCAAAGGATGAACTAAAC+TGG 0.308459 8_3:-28040459 None:intergenic
CTTGGTGCAGCACGAGAAAA+AGG 0.311357 8_3:+28049457 Msa1284880:CDS
CACATATATAATGGGTTTCA+TGG 0.318050 8_3:-28044650 None:intergenic
AGCAATATCTACAAACTCTA+TGG 0.327069 8_3:-28043236 None:intergenic
TATTGTACAAAAGGGAAAAT+TGG 0.329195 8_3:-28043125 None:intergenic
AGCACTTGGAGGCGAGAATC+TGG 0.330017 8_3:-28043175 None:intergenic
ACATTTGCCACATATATAAT+GGG 0.363510 8_3:-28044658 None:intergenic
AAAATTAATGTATTACAATA+TGG 0.367094 8_3:-28050047 None:intergenic
CCAATTGCTTAGTTAAACTT+TGG 0.372620 8_3:+28049989 Msa1284880:three_prime_UTR
ATTTGGCTCTATTGTACAAA+AGG 0.380886 8_3:-28043134 None:intergenic
ATAGATAAACACCTGAAGTA+TGG 0.386070 8_3:-28043472 None:intergenic
ATAGAGTTTGTAGATATTGC+TGG 0.390908 8_3:+28043238 Msa1284880:CDS
ATAAAGGTGAAAAGATTGTT+TGG 0.391878 8_3:-28040510 None:intergenic
ATCGTCTCCTTCTTTATCAA+TGG 0.396810 8_3:-28046815 None:intergenic
CCAAAGTTTAACTAAGCAAT+TGG 0.398248 8_3:-28049989 None:intergenic
TGCAAACTATAACGAGCAAT+TGG 0.403112 8_3:-28049871 None:intergenic
TTCCCTTTCAAAATCCGTTA+AGG 0.407794 8_3:-28044602 None:intergenic
TGCACGATCTGTGACCTTAA+CGG 0.408009 8_3:+28044588 Msa1284880:CDS
TAGTTCATCCTTTGAAATCA+AGG 0.408481 8_3:+28040465 Msa1284880:CDS
GAAGAAGAATATGAAAGCTT+TGG 0.411596 8_3:-28040542 None:intergenic
AGGGTAGATTTGCCAACATT+AGG 0.411876 8_3:-28040608 None:intergenic
CTTGACTTGCACCCTTTACA+AGG 0.415044 8_3:-28043261 None:intergenic
TGAGGTGGACTCCATACTTC+AGG 0.420128 8_3:+28043461 Msa1284880:CDS
GCTTTGGTTGAACTCCATAA+AGG 0.443251 8_3:-28040526 None:intergenic
TTTGTTGCTGCTGGTTCACT+TGG 0.447429 8_3:+28049439 Msa1284880:CDS
GAGCCAAATGTAGGGATTGT+TGG 0.447798 8_3:+28043148 Msa1284880:CDS
AGTCTCAAAGCTGGTATTGT+TGG 0.448030 8_3:+28040581 Msa1284880:CDS
GAACATTAGGCCAAGTATAA+GGG 0.454487 8_3:-28050115 None:intergenic
ACACCAACAATCCCTACATT+TGG 0.456211 8_3:-28043151 None:intergenic
GTCTCAATCCATGGACTCCT+AGG 0.456251 8_3:-28049937 None:intergenic
TATAACGACTTTGTTGCTGC+TGG 0.465558 8_3:+28049430 Msa1284880:CDS
GCGAGAGAATGCTCCAACCT+AGG 0.474501 8_3:+28049920 Msa1284880:three_prime_UTR
TGTACAATAGAGCCAAATGT+AGG 0.476002 8_3:+28043139 Msa1284880:CDS
AAGGCATGGACAATACTTGC+AGG 0.478540 8_3:+28047968 Msa1284880:CDS
TCACATGTTTAGGTTGAAAA+CGG 0.480742 8_3:+28043088 Msa1284880:intron
ACATCATTCATTCCCATGTC+AGG 0.483623 8_3:-28046898 None:intergenic
GTTGCATCTGAGTTGCAGTC+TGG 0.485016 8_3:+28044739 Msa1284880:CDS
TACTGAGATCAGAGAGCACT+TGG 0.485104 8_3:-28043189 None:intergenic
AAATATATCTCCCTTATACT+TGG 0.488659 8_3:+28050105 Msa1284880:three_prime_UTR
GATATTGCTGGCCTTGTAAA+GGG 0.495696 8_3:+28043250 Msa1284880:CDS
GTTTGAAGCATCAGCTAGAT+CGG 0.504962 8_3:-28044689 None:intergenic
CTTTCTCCTTATTATAACAA+TGG 0.505807 8_3:+28040421 Msa1284880:exon
TGCTCCAACCTAGGAGTCCA+TGG 0.509681 8_3:+28049929 Msa1284880:three_prime_UTR
TCTACAAACTCTATGGATGC+TGG 0.511938 8_3:-28043229 None:intergenic
CAATCCATGGACTCCTAGGT+TGG 0.515307 8_3:-28049933 None:intergenic
TTTGGCTCTATTGTACAAAA+GGG 0.516326 8_3:-28043133 None:intergenic
TGATGAATTTCCTCCTGACA+TGG 0.520273 8_3:+28046885 Msa1284880:CDS
ATTGTTGGTCTTCCTAATGT+TGG 0.520640 8_3:+28040596 Msa1284880:CDS
TCGAACTTACCACTCTCAGA+TGG 0.521851 8_3:+28049793 Msa1284880:three_prime_UTR
AGATATTGCTGGCCTTGTAA+AGG 0.526607 8_3:+28043249 Msa1284880:CDS
CATGAAACCCATTATATATG+TGG 0.528753 8_3:+28044651 Msa1284880:CDS
AGAGGCAGAAAAGTCTGCAT+TGG 0.531186 8_3:+28044531 Msa1284880:CDS
GATTACGTCAATATCAGACT+TGG 0.537340 8_3:-28044093 None:intergenic
CTTCAACTGTTACAGGGTCT+CGG 0.538322 8_3:+28043414 Msa1284880:intron
AGTATATATGTCTCAATCCA+TGG 0.540844 8_3:-28049946 None:intergenic
TGAGATCAGAGAGCACTTGG+AGG 0.542543 8_3:-28043186 None:intergenic
CTTGTAAAGGGTGCAAGTCA+AGG 0.552602 8_3:+28043262 Msa1284880:CDS
CTGCCTTCCATTGATAAAGA+AGG 0.552616 8_3:+28046808 Msa1284880:CDS
ATTCGTGTAGCACTCTTGGA+TGG 0.555782 8_3:+28044559 Msa1284880:CDS
TGATATTGACGTAATCAACT+TGG 0.561995 8_3:+28044100 Msa1284880:CDS
AATTGTAACAATTTCAGCAC+AGG 0.562373 8_3:+28044762 Msa1284880:CDS
CACTCTCAGATGGGAATCAG+TGG 0.563008 8_3:+28049803 Msa1284880:three_prime_UTR
TCTCCTTCTTTATCAATGGA+AGG 0.565435 8_3:-28046811 None:intergenic
GATGAATTTCCTCCTGACAT+GGG 0.566090 8_3:+28046886 Msa1284880:CDS
GTACAATAGAGCCAAATGTA+GGG 0.572299 8_3:+28043140 Msa1284880:CDS
AGACGATGATGATGATGAAG+TGG 0.573163 8_3:+28046831 Msa1284880:CDS
CGAACTTACCACTCTCAGAT+GGG 0.575919 8_3:+28049794 Msa1284880:three_prime_UTR
CACTGATTCCCATCTGAGAG+TGG 0.580161 8_3:-28049802 None:intergenic
ATAAGCATGAGTCTCAAAGC+TGG 0.580496 8_3:+28040572 Msa1284880:CDS
TTTATCACATATTCGTGAGG+TGG 0.580604 8_3:+28043446 Msa1284880:CDS
TGCTTAGTTAAACTTTGGAG+AGG 0.582054 8_3:+28049994 Msa1284880:three_prime_UTR
GACTTACGACGGCATTGAAG+AGG 0.585086 8_3:-28040628 None:intergenic
ATTACGTCAATATCAGACTT+GGG 0.585208 8_3:-28044092 None:intergenic
TTCAAAGGATGAACTAAACT+GGG 0.586595 8_3:-28040458 None:intergenic
AATGACATTATTCATGTGAA+CGG 0.586726 8_3:+28044059 Msa1284880:CDS
TATATATGTGGCAAATGTTG+CGG 0.590385 8_3:+28044663 Msa1284880:CDS
GTTAAGGTCACAGATCGTGC+AGG 0.591430 8_3:-28044586 None:intergenic
AAAGACTACATTGTACAAGA+AGG 0.600557 8_3:+28049739 Msa1284880:CDS
TGATGAAGTGGAAGAAAATG+AGG 0.606593 8_3:+28046843 Msa1284880:CDS
AATGTATCCACAGGAGACAA+AGG 0.607824 8_3:+28047949 Msa1284880:intron
TGTTTGCAGTTGAGATCTGA+AGG 0.613501 8_3:+28049715 Msa1284880:intron
TCTCAGTAAATCTCAACGAA+TGG 0.613660 8_3:+28043204 Msa1284880:CDS
ACTTACGACGGCATTGAAGA+GGG 0.619986 8_3:-28040627 None:intergenic
TGTTTAGGTTGAAAACGGAA+AGG 0.629927 8_3:+28043093 Msa1284880:intron
TCATTCATTCCCATGTCAGG+AGG 0.648798 8_3:-28046895 None:intergenic
AAAGGGTGCAAGTCAAGGCG+AGG 0.653560 8_3:+28043267 Msa1284880:CDS
ACATCTTACTTGATTCTCTG+TGG 0.654860 8_3:-28047538 None:intergenic
ATCCACAGGAGACAAAGGCA+TGG 0.678907 8_3:+28047954 Msa1284880:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTCAATTAAGA+TGG - chr8_3:28041748-28041767 None:intergenic 10.0%
!! TTATATTATGAAATATAAAC+GGG + chr8_3:28042343-28042362 Msa1284880:intron 10.0%
!! GTTATAAAAATATATATATG+TGG + chr8_3:28044812-28044831 Msa1284880:intron 10.0%
!!! TAAATCATTTTCAAAATAAA+TGG - chr8_3:28044886-28044905 None:intergenic 10.0%
!! ATTCATCTTATAAATATAAT+AGG - chr8_3:28046530-28046549 None:intergenic 10.0%
!! ATTCATCTTATAAATATAAT+AGG + chr8_3:28046530-28046549 Msa1284880:intron 10.0%
!!! ATTGTAATAATTTAAAACAA+AGG + chr8_3:28048744-28048763 Msa1284880:intron 10.0%
!! TGATATAAATGAAAATAAAA+AGG - chr8_3:28049528-28049547 None:intergenic 10.0%
!! AAAATTAATGTATTACAATA+TGG - chr8_3:28050050-28050069 None:intergenic 10.0%
!! GAAACAAAATAATAAGTTAA+GGG + chr8_3:28041447-28041466 Msa1284880:intron 15.0%
!!! ACAAGGTTTTATTTTATTAT+AGG + chr8_3:28041926-28041945 Msa1284880:intron 15.0%
!! ATTAAAACATAATAGATACT+TGG + chr8_3:28046334-28046353 Msa1284880:intron 15.0%
!! ATTAAAACATAATAGATACT+TGG - chr8_3:28046334-28046353 None:intergenic 15.0%
!! ACAGGTTATTAAATTTAAAT+TGG + chr8_3:28048088-28048107 Msa1284880:intron 15.0%
!!! GAGTATTAAAGTATTTAAAT+AGG - chr8_3:28048426-28048445 None:intergenic 15.0%
!! TAAATGATTAAGGTTATTAT+AGG - chr8_3:28048543-28048562 None:intergenic 15.0%
!!! AATGAAGTATTAAATGATTA+AGG - chr8_3:28048553-28048572 None:intergenic 15.0%
!! AAATTTAATAGATGAGTTAT+AGG + chr8_3:28048826-28048845 Msa1284880:intron 15.0%
!!! TTATTTTCATTTATATCACT+TGG + chr8_3:28049530-28049549 Msa1284880:intron 15.0%
!!! AATGCTTTATTTTCTTTGAT+GGG + chr8_3:28040835-28040854 Msa1284880:intron 20.0%
!!! AGAAAATGACTTTTAGATTA+AGG + chr8_3:28040868-28040887 Msa1284880:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr8_3:28041195-28041214 Msa1284880:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG - chr8_3:28041476-28041495 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG - chr8_3:28041475-28041494 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG + chr8_3:28041255-28041274 Msa1284880:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr8_3:28041385-28041404 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr8_3:28041385-28041404 Msa1284880:intron 20.0%
!!! CTTATTATTTTGTTTCGATT+TGG - chr8_3:28041443-28041462 None:intergenic 20.0%
!! CGAAACAAAATAATAAGTTA+AGG + chr8_3:28041446-28041465 Msa1284880:intron 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - chr8_3:28041255-28041274 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + chr8_3:28041475-28041494 Msa1284880:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + chr8_3:28041476-28041495 Msa1284880:intron 20.0%
!! TGTTTGTATACATTCATTTA+AGG - chr8_3:28041582-28041601 None:intergenic 20.0%
!! AATGGTTGTAAAATTGATTA+TGG - chr8_3:28041635-28041654 None:intergenic 20.0%
!!! TAAAATTGATTTCGAATGAA+TGG - chr8_3:28041653-28041672 None:intergenic 20.0%
!! TAAATATAAAGCGACATTAA+AGG - chr8_3:28041788-28041807 None:intergenic 20.0%
!!! TATTAAGTGTTGTTAAATAG+AGG + chr8_3:28042180-28042199 Msa1284880:intron 20.0%
!!! ACTATTTAGTTTTGTTTGTT+AGG + chr8_3:28042496-28042515 Msa1284880:intron 20.0%
!!! GAAATGAGATTTGAAATTTA+TGG + chr8_3:28042927-28042946 Msa1284880:intron 20.0%
!! AATCCTCTAGTATATAAAAA+AGG - chr8_3:28043555-28043574 None:intergenic 20.0%
!! AGATTGGATAAACTAAAAAA+AGG + chr8_3:28044386-28044405 Msa1284880:intron 20.0%
!!! ATTTTGAAAGTTTTGTTTGT+AGG + chr8_3:28044507-28044526 Msa1284880:intron 20.0%
!!! TCATTTTCAAAATAAATGGA+AGG - chr8_3:28044882-28044901 None:intergenic 20.0%
!!! TTAGAAACTTATTTTGAACT+TGG - chr8_3:28045887-28045906 None:intergenic 20.0%
!! GTTCAAAATAAGTTTCTAAA+AGG + chr8_3:28045888-28045907 Msa1284880:intron 20.0%
!! ACAAATCAAATCTAGATAAT+GGG - chr8_3:28047221-28047240 None:intergenic 20.0%
!! TAGTTTCACAAATATCATAT+GGG + chr8_3:28047387-28047406 Msa1284880:intron 20.0%
!!! ATTTTCTCAAATTATTACTG+GGG - chr8_3:28047827-28047846 None:intergenic 20.0%
!!! CATTTTCTCAAATTATTACT+GGG - chr8_3:28047828-28047847 None:intergenic 20.0%
!!! TAGAAAAACAACATTAGTTT+TGG - chr8_3:28047930-28047949 None:intergenic 20.0%
!!! GAATACCATTTTCAAATAAT+CGG + chr8_3:28048049-28048068 Msa1284880:intron 20.0%
!! TCAAAATGTGACAATTAAAA+AGG - chr8_3:28048457-28048476 None:intergenic 20.0%
!! TAAATATATAGGGGTAATAT+AGG + chr8_3:28048595-28048614 Msa1284880:intron 20.0%
!!! GTAATAATTTAAAACAAAGG+TGG + chr8_3:28048747-28048766 Msa1284880:intron 20.0%
!! TGTATCAATAATATATAAGC+AGG + chr8_3:28048953-28048972 Msa1284880:intron 20.0%
!! AGCTTATAATTTAGAAAAGA+CGG + chr8_3:28049049-28049068 Msa1284880:intron 20.0%
!!! TAGGAAATTTTAGTATTATC+TGG + chr8_3:28049215-28049234 Msa1284880:intron 20.0%
!!! AAATTTTAGTATTATCTGGT+CGG + chr8_3:28049219-28049238 Msa1284880:intron 20.0%
!!! GTCTCTATTTATTTTCTATT+AGG + chr8_3:28049402-28049421 Msa1284880:intron 20.0%
!!! TCTATTTATTTTCTATTAGG+TGG + chr8_3:28049405-28049424 Msa1284880:intron 20.0%
!! TTCACTATGAACATTTTCAA+TGG - chr8_3:28040340-28040359 None:intergenic 25.0%
! CTTTCTCCTTATTATAACAA+TGG + chr8_3:28040421-28040440 Msa1284880:exon 25.0%
! TTGTTGCCATTGTTATAATA+AGG - chr8_3:28040430-28040449 None:intergenic 25.0%
! ATAAAGGTGAAAAGATTGTT+TGG - chr8_3:28040513-28040532 None:intergenic 25.0%
!! AAACAATCTTTTCACCTTTA+TGG + chr8_3:28040512-28040531 Msa1284880:CDS 25.0%
!!! GAATGCTTTATTTTCTTTGA+TGG + chr8_3:28040834-28040853 Msa1284880:intron 25.0%
! CATGTTAAAATCAATTATCG+AGG - chr8_3:28041044-28041063 None:intergenic 25.0%
!!! TCTAGATTTAATTTTAGCGT+TGG + chr8_3:28041088-28041107 Msa1284880:intron 25.0%
! GTTCAATCTACTTTAAATGA+AGG + chr8_3:28041118-28041137 Msa1284880:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr8_3:28041162-28041181 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr8_3:28041163-28041182 None:intergenic 25.0%
! GAAACCAAAAAGTAACTTAA+GGG - chr8_3:28041222-28041241 None:intergenic 25.0%
!! CGAAACTTTTAATAGTTAAG+GGG - chr8_3:28041477-28041496 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr8_3:28041384-28041403 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr8_3:28041286-28041305 Msa1284880:intron 25.0%
! ATACATTCATCCTAACATAA+AGG - chr8_3:28041345-28041364 None:intergenic 25.0%
! GATGAATGTATTAGAGTTAA+GGG + chr8_3:28041354-28041373 Msa1284880:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr8_3:28041286-28041305 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr8_3:28041384-28041403 Msa1284880:intron 25.0%
! GGAACCAAAAAATAAGTTAA+GGG + chr8_3:28041416-28041435 Msa1284880:intron 25.0%
! GAAACCAAAAAGTAAGTTAA+AGG + chr8_3:28041507-28041526 Msa1284880:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr8_3:28041286-28041305 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr8_3:28041384-28041403 Msa1284880:intron 25.0%
!!! TGGTACCTTAACTTATTTTT+TGG - chr8_3:28041545-28041564 None:intergenic 25.0%
!! TTAAGGCTTAATTACTCTTT+TGG - chr8_3:28041565-28041584 None:intergenic 25.0%
!!! TTCGAAATCAATTTTAGTCA+TGG + chr8_3:28041657-28041676 Msa1284880:intron 25.0%
!!! TTTTTCAATTAAGATGGTGA+GGG - chr8_3:28041742-28041761 None:intergenic 25.0%
!!! TTTTTTCAATTAAGATGGTG+AGG - chr8_3:28041743-28041762 None:intergenic 25.0%
! AAAATGAACAATCGAACTAA+CGG - chr8_3:28041812-28041831 None:intergenic 25.0%
! TCAAAATCATCATACAAACA+AGG - chr8_3:28042003-28042022 None:intergenic 25.0%
!!! TCGACACTTACATTTTAAAA+TGG + chr8_3:28042385-28042404 Msa1284880:intron 25.0%
! ATTTGCCATTCATATAAACA+GGG - chr8_3:28042412-28042431 None:intergenic 25.0%
! AATTTGCCATTCATATAAAC+AGG - chr8_3:28042413-28042432 None:intergenic 25.0%
! TGTTTATATGAATGGCAAAT+TGG + chr8_3:28042412-28042431 Msa1284880:intron 25.0%
! TGTTAGGACTTTGAATAAAT+GGG + chr8_3:28042440-28042459 Msa1284880:intron 25.0%
! TAACTAACTTAACTAGTTAC+TGG - chr8_3:28042477-28042496 None:intergenic 25.0%
!! TGAAATTTTTGAACTAGAGA+AGG + chr8_3:28042599-28042618 Msa1284880:intron 25.0%
! ATATAGTCAACTATACTTTG+TGG + chr8_3:28042848-28042867 Msa1284880:intron 25.0%
!! GAAATTTATGGTTTTTGTCA+CGG + chr8_3:28042939-28042958 Msa1284880:intron 25.0%
! TATTATAGCATTCAGAACAA+AGG - chr8_3:28043031-28043050 None:intergenic 25.0%
! TATTGTACAAAAGGGAAAAT+TGG - chr8_3:28043128-28043147 None:intergenic 25.0%
!! TGACAACTTCTCTTATTTAT+TGG + chr8_3:28043351-28043370 Msa1284880:intron 25.0%
!! ATTTTTATCACATATTCGTG+AGG + chr8_3:28043443-28043462 Msa1284880:CDS 25.0%
! AATAGAAGATGAAAGTAAAC+TGG - chr8_3:28043514-28043533 None:intergenic 25.0%
!!! CTTCCTTTTTTATATACTAG+AGG + chr8_3:28043549-28043568 Msa1284880:intron 25.0%
! TTATATACTAGAGGATTGTT+TGG + chr8_3:28043558-28043577 Msa1284880:intron 25.0%
! TTCTGATTATAATAATGCCA+TGG + chr8_3:28043995-28044014 Msa1284880:intron 25.0%
! TCTGATTATAATAATGCCAT+GGG + chr8_3:28043996-28044015 Msa1284880:intron 25.0%
! AATGACATTATTCATGTGAA+CGG + chr8_3:28044059-28044078 Msa1284880:CDS 25.0%
! AACGATAATAACAGATTCAA+AGG - chr8_3:28044177-28044196 None:intergenic 25.0%
!! ATTATCGTTCTAAATGTTTG+TGG + chr8_3:28044188-28044207 Msa1284880:intron 25.0%
! ACATTTGCCACATATATAAT+GGG - chr8_3:28044661-28044680 None:intergenic 25.0%
! AACATTTGCCACATATATAA+TGG - chr8_3:28044662-28044681 None:intergenic 25.0%
! ATAGAAACGATATCAAACAT+AGG - chr8_3:28045462-28045481 None:intergenic 25.0%
! TATGTTTGATATCGTTTCTA+TGG + chr8_3:28045461-28045480 Msa1284880:intron 25.0%
! AGGAATCTTTCTAAATCATA+CGG - chr8_3:28045586-28045605 None:intergenic 25.0%
! TGATTTAGAAAGATTCCTTT+AGG + chr8_3:28045588-28045607 Msa1284880:intron 25.0%
! GATTTAGAAAGATTCCTTTA+GGG + chr8_3:28045589-28045608 Msa1284880:intron 25.0%
! AATGCTAAGATTATCAAATC+AGG - chr8_3:28045635-28045654 None:intergenic 25.0%
!!! TTAATCGTTTTTTTTCTTCC+TGG + chr8_3:28047090-28047109 Msa1284880:intron 25.0%
! AAGAAAAAGAATATTCCAGA+GGG - chr8_3:28047168-28047187 None:intergenic 25.0%
! CACAAATCAAATCTAGATAA+TGG - chr8_3:28047222-28047241 None:intergenic 25.0%
! AGTAACTTGAAATGAAACTA+AGG - chr8_3:28047273-28047292 None:intergenic 25.0%
! ACCATTTAAAAATACCAAGA+TGG - chr8_3:28047330-28047349 None:intergenic 25.0%
! CTAGTTTCACAAATATCATA+TGG + chr8_3:28047386-28047405 Msa1284880:intron 25.0%
! ATGTGTTTATTTGTTTATGC+AGG + chr8_3:28047557-28047576 Msa1284880:intron 25.0%
!! CAAGAATATTTGAAATCTCT+TGG + chr8_3:28047618-28047637 Msa1284880:intron 25.0%
!! CCATTTTCTCAAATTATTAC+TGG - chr8_3:28047829-28047848 None:intergenic 25.0%
! CCAGTAATAATTTGAGAAAA+TGG + chr8_3:28047826-28047845 Msa1284880:intron 25.0%
! AAATACAGGAGTTAAAATCT+AGG - chr8_3:28047902-28047921 None:intergenic 25.0%
! TATCTCCGATTATTTGAAAA+TGG - chr8_3:28048057-28048076 None:intergenic 25.0%
! GGAGATATTGATATTTAAAC+AGG + chr8_3:28048070-28048089 Msa1284880:intron 25.0%
! ATATCAAGACCTAAAGATAA+AGG - chr8_3:28048119-28048138 None:intergenic 25.0%
! TTTGTCAACAAAAGGAAAAA+CGG - chr8_3:28048151-28048170 None:intergenic 25.0%
!! TTTTTCCTTTTGTTGACAAA+TGG + chr8_3:28048151-28048170 Msa1284880:intron 25.0%
! CGGATTACATCATTAAAAAA+GGG - chr8_3:28048221-28048240 None:intergenic 25.0%
! TCGGATTACATCATTAAAAA+AGG - chr8_3:28048222-28048241 None:intergenic 25.0%
!!! AGTAAAAGTATTTGTTGTCT+TGG - chr8_3:28048493-28048512 None:intergenic 25.0%
! TCTCTCTGCAATAAATATAT+AGG + chr8_3:28048584-28048603 Msa1284880:intron 25.0%
! CTCTCTGCAATAAATATATA+GGG + chr8_3:28048585-28048604 Msa1284880:intron 25.0%
! TCTCTGCAATAAATATATAG+GGG + chr8_3:28048586-28048605 Msa1284880:intron 25.0%
!! GTTCAAAGTATCATTAAATG+TGG - chr8_3:28048626-28048645 None:intergenic 25.0%
! TGCAAAAGTGACAATTATAA+AGG + chr8_3:28048682-28048701 Msa1284880:intron 25.0%
! AAGTGACAATTATAAAGGAA+CGG + chr8_3:28048687-28048706 Msa1284880:intron 25.0%
!!! TTCAATATTCTAGAATATGC+AGG + chr8_3:28048784-28048803 Msa1284880:intron 25.0%
!!! TCAATATTCTAGAATATGCA+GGG + chr8_3:28048785-28048804 Msa1284880:intron 25.0%
! TTAAGCCAAAAGAAAATTGA+CGG + chr8_3:28049026-28049045 Msa1284880:intron 25.0%
!! TTTTGAACTGAATACATGAT+AGG + chr8_3:28049196-28049215 Msa1284880:intron 25.0%
!! TAAGTTTAGCTAATGTTTTC+GGG - chr8_3:28049684-28049703 None:intergenic 25.0%
!! GTAAGTTTAGCTAATGTTTT+CGG - chr8_3:28049685-28049704 None:intergenic 25.0%
! AAATATATCTCCCTTATACT+TGG + chr8_3:28050105-28050124 Msa1284880:three_prime_UTR 25.0%
! ATGAACATTTTCAATGGCTA+CGG - chr8_3:28040334-28040353 None:intergenic 30.0%
TTCAAAGGATGAACTAAACT+GGG - chr8_3:28040461-28040480 None:intergenic 30.0%
TTTCAAAGGATGAACTAAAC+TGG - chr8_3:28040462-28040481 None:intergenic 30.0%
!! TAGTTCATCCTTTGAAATCA+AGG + chr8_3:28040465-28040484 Msa1284880:CDS 30.0%
!!! CCTTTGAAATCAAGGTTTTT+CGG + chr8_3:28040473-28040492 Msa1284880:CDS 30.0%
GAAGAAGAATATGAAAGCTT+TGG - chr8_3:28040545-28040564 None:intergenic 30.0%
!! ACACTTTTAATCAGAAGTGT+CGG - chr8_3:28040690-28040709 None:intergenic 30.0%
TTGTCCCTTAAGTTATTTGT+TGG + chr8_3:28041155-28041174 Msa1284880:intron 30.0%
CGAAACCAAAAAGTAACTTA+AGG - chr8_3:28041223-28041242 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG + chr8_3:28041226-28041245 Msa1284880:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr8_3:28041275-28041294 Msa1284880:intron 30.0%
GGATGAATGTATTAGAGTTA+AGG + chr8_3:28041353-28041372 Msa1284880:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr8_3:28041275-28041294 None:intergenic 30.0%
AATAAGTTAAGGGACCAAAA+CGG + chr8_3:28041395-28041414 Msa1284880:intron 30.0%
!!! CTTATTTTTTGGTTCCGTTT+TGG - chr8_3:28041412-28041431 None:intergenic 30.0%
CGGAACCAAAAAATAAGTTA+AGG + chr8_3:28041415-28041434 Msa1284880:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr8_3:28041275-28041294 None:intergenic 30.0%
!!! CTTACTTTTTGGTTTCGTTT+TGG - chr8_3:28041503-28041522 None:intergenic 30.0%
!! TGGTCCTTTAACTTACTTTT+TGG - chr8_3:28041514-28041533 None:intergenic 30.0%
AAATGAACAATCGAACTAAC+GGG - chr8_3:28041811-28041830 None:intergenic 30.0%
! ATATCAACTAGCTTATGACA+AGG + chr8_3:28041909-28041928 Msa1284880:intron 30.0%
AAAATTGAAGCGTGAATTCT+AGG + chr8_3:28042036-28042055 Msa1284880:intron 30.0%
AAATTGAAGCGTGAATTCTA+GGG + chr8_3:28042037-28042056 Msa1284880:intron 30.0%
TGCAAAATATTGTCCAATAG+TGG + chr8_3:28042266-28042285 Msa1284880:intron 30.0%
TTGTCAATCACAGAAAATAG+TGG - chr8_3:28042317-28042336 None:intergenic 30.0%
GTGTTAGGACTTTGAATAAA+TGG + chr8_3:28042439-28042458 Msa1284880:intron 30.0%
!!! TTCTGTTTTTGTTGCTTCTA+CGG + chr8_3:28042527-28042546 Msa1284880:intron 30.0%
! TGCTTCTACGGATTATAAAT+AGG + chr8_3:28042539-28042558 Msa1284880:intron 30.0%
! GTATTGTAGTCTTAACTCTT+AGG - chr8_3:28042751-28042770 None:intergenic 30.0%
AATAGTGATCTCACATGTTT+AGG + chr8_3:28043078-28043097 Msa1284880:intron 30.0%
!! TCACATGTTTAGGTTGAAAA+CGG + chr8_3:28043088-28043107 Msa1284880:intron 30.0%
!! TTTGGCTCTATTGTACAAAA+GGG - chr8_3:28043136-28043155 None:intergenic 30.0%
!! ATTTGGCTCTATTGTACAAA+AGG - chr8_3:28043137-28043156 None:intergenic 30.0%
AGCAATATCTACAAACTCTA+TGG - chr8_3:28043239-28043258 None:intergenic 30.0%
ATAGAGTTTGTAGATATTGC+TGG + chr8_3:28043238-28043257 Msa1284880:CDS 30.0%
TTTCTCTTCTCGTTTATGTT+TGG + chr8_3:28043299-28043318 Msa1284880:intron 30.0%
TATCTTACTTCAACTGTTAC+AGG + chr8_3:28043407-28043426 Msa1284880:intron 30.0%
ATCTTACTTCAACTGTTACA+GGG + chr8_3:28043408-28043427 Msa1284880:intron 30.0%
ATAGATAAACACCTGAAGTA+TGG - chr8_3:28043475-28043494 None:intergenic 30.0%
ATTACGTCAATATCAGACTT+GGG - chr8_3:28044095-28044114 None:intergenic 30.0%
TGATATTGACGTAATCAACT+TGG + chr8_3:28044100-28044119 Msa1284880:CDS 30.0%
TCAAAGGAAATAAAAGCAGT+TGG - chr8_3:28044161-28044180 None:intergenic 30.0%
AATGCAGATTGAGAAAAGAT+TGG + chr8_3:28044370-28044389 Msa1284880:intron 30.0%
ACTAAAAAAAGGCAAGACAA+AGG + chr8_3:28044397-28044416 Msa1284880:intron 30.0%
!!! AAAGTTTTGTTTGTAGGAAG+AGG + chr8_3:28044513-28044532 Msa1284880:intron 30.0%
!! CACATATATAATGGGTTTCA+TGG - chr8_3:28044653-28044672 None:intergenic 30.0%
CATGAAACCCATTATATATG+TGG + chr8_3:28044651-28044670 Msa1284880:CDS 30.0%
TATATATGTGGCAAATGTTG+CGG + chr8_3:28044663-28044682 Msa1284880:CDS 30.0%
TCAAACAATGATTACGTTAC+AGG + chr8_3:28044706-28044725 Msa1284880:CDS 30.0%
AATTGTAACAATTTCAGCAC+AGG + chr8_3:28044762-28044781 Msa1284880:CDS 30.0%
TGTAACTAGAAAACAGACAA+TGG - chr8_3:28044838-28044857 None:intergenic 30.0%
!!! TCTGTTTTCTAGTTACACTT+GGG + chr8_3:28044841-28044860 Msa1284880:intron 30.0%
TTCAAAATAAATGGAAGGCA+AGG - chr8_3:28044877-28044896 None:intergenic 30.0%
CATGTGATACTAGAAGAAAA+TGG - chr8_3:28045007-28045026 None:intergenic 30.0%
! GATGTAATAGTTTTCTTCCT+GGG - chr8_3:28045040-28045059 None:intergenic 30.0%
! AGATGTAATAGTTTTCTTCC+TGG - chr8_3:28045041-28045060 None:intergenic 30.0%
!! ATTGTTTTTCCTCGGATATT+AGG - chr8_3:28045191-28045210 None:intergenic 30.0%
!! GAGGAAAAATTGTTTTTCCT+CGG - chr8_3:28045199-28045218 None:intergenic 30.0%
! TCCATCATGTAATGTTGATT+AGG + chr8_3:28045542-28045561 Msa1284880:intron 30.0%
TCCTAATCAACATTACATGA+TGG - chr8_3:28045546-28045565 None:intergenic 30.0%
! ATCATGTAATGTTGATTAGG+AGG + chr8_3:28045545-28045564 Msa1284880:intron 30.0%
! TCATGTAATGTTGATTAGGA+GGG + chr8_3:28045546-28045565 Msa1284880:intron 30.0%
!! CATATTCTTTAAGACCCTAA+AGG - chr8_3:28045606-28045625 None:intergenic 30.0%
!! ACTTGGTAGTTTCTTTTTGT+TGG - chr8_3:28045858-28045877 None:intergenic 30.0%
! TTTGAACTTGGTAGTTAACT+TGG - chr8_3:28045875-28045894 None:intergenic 30.0%
ATGATGTCTTAGACTTAGAT+GGG - chr8_3:28046914-28046933 None:intergenic 30.0%
AATGATGTCTTAGACTTAGA+TGG - chr8_3:28046913-28046932 None:intergenic 30.0%
! AATTGATTCCGAAGATGATA+CGG - chr8_3:28046172-28046191 None:intergenic 30.0%
GTGATGGTTAACTCAAAATT+GGG - chr8_3:28046609-28046628 None:intergenic 30.0%
TGTGATGGTTAACTCAAAAT+TGG - chr8_3:28046608-28046627 None:intergenic 30.0%
!!! GAATAAGGTTGTTTTTGTGA+TGG - chr8_3:28046253-28046272 None:intergenic 30.0%
TGTGATGGTTAACTCAAAAT+TGG + chr8_3:28046608-28046627 Msa1284880:intron 30.0%
GTGATGGTTAACTCAAAATT+GGG + chr8_3:28046609-28046628 Msa1284880:intron 30.0%
AATTTATTCCGAAGATGATG+CGG + chr8_3:28046678-28046697 Msa1284880:intron 30.0%
AATGATGTCTTAGACTTAGA+TGG + chr8_3:28046913-28046932 Msa1284880:intron 30.0%
ATGATGTCTTAGACTTAGAT+GGG + chr8_3:28046914-28046933 Msa1284880:intron 30.0%
GAAGAAAAAGAATATTCCAG+AGG - chr8_3:28047169-28047188 None:intergenic 30.0%
TTAAAAATACCAAGATGGCT+AGG - chr8_3:28047325-28047344 None:intergenic 30.0%
!! GCCATCTTGGTATTTTTAAA+TGG + chr8_3:28047326-28047345 Msa1284880:intron 30.0%
! ACTTTCCATGTATTTTCAGT+AGG + chr8_3:28047418-28047437 Msa1284880:intron 30.0%
! CTTTCCATGTATTTTCAGTA+GGG + chr8_3:28047419-28047438 Msa1284880:intron 30.0%
AATTCCCTACTGAAAATACA+TGG - chr8_3:28047426-28047445 None:intergenic 30.0%
TTATTTGTTTATGCAGGTTG+AGG + chr8_3:28047563-28047582 Msa1284880:intron 30.0%
GATCATATGTTGCTCTAATT+AGG - chr8_3:28047668-28047687 None:intergenic 30.0%
! TAGAGCAACATATGATCTTT+TGG + chr8_3:28047671-28047690 Msa1284880:intron 30.0%
! AGAGCAACATATGATCTTTT+GGG + chr8_3:28047672-28047691 Msa1284880:intron 30.0%
! TTAAAATCTAGGATGTCTTG+GGG - chr8_3:28047891-28047910 None:intergenic 30.0%
! GTTAAAATCTAGGATGTCTT+GGG - chr8_3:28047892-28047911 None:intergenic 30.0%
! AGTTAAAATCTAGGATGTCT+TGG - chr8_3:28047893-28047912 None:intergenic 30.0%
!!! TAGTTTTGGAGATGAAATAC+AGG - chr8_3:28047916-28047935 None:intergenic 30.0%
! TGTTTTTCTAATGTATCCAC+AGG + chr8_3:28047940-28047959 Msa1284880:intron 30.0%
TTGGAGTTTCCTTTATCTTT+AGG + chr8_3:28048107-28048126 Msa1284880:intron 30.0%
!! ACGTTATTATCGATTCTGTT+TGG - chr8_3:28048253-28048272 None:intergenic 30.0%
AACAGAATCGATAATAACGT+AGG + chr8_3:28048253-28048272 Msa1284880:intron 30.0%
!! TTTTAAGTCTCTGTTGTACT+AGG + chr8_3:28048302-28048321 Msa1284880:intron 30.0%
! TATTCATTCTGACTTTGAGA+AGG + chr8_3:28048352-28048371 Msa1284880:intron 30.0%
! ATTCATTCTGACTTTGAGAA+GGG + chr8_3:28048353-28048372 Msa1284880:intron 30.0%
GACAATTAAAAAGGAACAGA+GGG - chr8_3:28048448-28048467 None:intergenic 30.0%
TGACAATTAAAAAGGAACAG+AGG - chr8_3:28048449-28048468 None:intergenic 30.0%
!! CAATATTCTAGAATATGCAG+GGG + chr8_3:28048786-28048805 Msa1284880:intron 30.0%
! TGTTCCCTGCAAATATTTTA+GGG - chr8_3:28048997-28049016 None:intergenic 30.0%
! ATGTTCCCTGCAAATATTTT+AGG - chr8_3:28048998-28049017 None:intergenic 30.0%
TTTATCCAACTAAGTAGAGA+CGG - chr8_3:28049250-28049269 None:intergenic 30.0%
TAATAAACAAAGCCAGTTCT+AGG - chr8_3:28049293-28049312 None:intergenic 30.0%
TTATATCACTTGGCTGTTAT+TGG + chr8_3:28049540-28049559 Msa1284880:intron 30.0%
ATTACATGAAACACAATGAG+CGG - chr8_3:28049589-28049608 None:intergenic 30.0%
TTATAAGTTTGAACCAAGTC+CGG - chr8_3:28049640-28049659 None:intergenic 30.0%
CTTGGTTCAAACTTATAAAC+AGG + chr8_3:28049642-28049661 Msa1284880:intron 30.0%
CAACTGCAAACAACATATTT+AGG - chr8_3:28049707-28049726 None:intergenic 30.0%
AAAGACTACATTGTACAAGA+AGG + chr8_3:28049739-28049758 Msa1284880:CDS 30.0%
AGTATATATGTCTCAATCCA+TGG - chr8_3:28049949-28049968 None:intergenic 30.0%
CCAAAGTTTAACTAAGCAAT+TGG - chr8_3:28049992-28050011 None:intergenic 30.0%
CCAATTGCTTAGTTAAACTT+TGG + chr8_3:28049989-28050008 Msa1284880:three_prime_UTR 30.0%
CCGAAAAACCTTGATTTCAA+AGG - chr8_3:28040476-28040495 None:intergenic 35.0%
!! ATTGTTGGTCTTCCTAATGT+TGG + chr8_3:28040596-28040615 Msa1284880:CDS 35.0%
GGGTCATGTAAACGAAAAAA+GGG - chr8_3:28040661-28040680 None:intergenic 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG + chr8_3:28041215-28041234 Msa1284880:intron 35.0%
AATCCTAAGAATCGAACACT+AGG + chr8_3:28042071-28042090 Msa1284880:intron 35.0%
ATTGAGAGAACGACTAATTC+CGG + chr8_3:28042125-28042144 Msa1284880:intron 35.0%
TGATTATAGCTCAGTATAGC+CGG - chr8_3:28042147-28042166 None:intergenic 35.0%
ACTACTACTATTGCCACTAT+TGG - chr8_3:28042282-28042301 None:intergenic 35.0%
ATGGTCCCTGTTTATATGAA+TGG + chr8_3:28042404-28042423 Msa1284880:intron 35.0%
! AAATAGGACGTGTTTTGCTA+AGG + chr8_3:28042555-28042574 Msa1284880:intron 35.0%
! AATAGGACGTGTTTTGCTAA+GGG + chr8_3:28042556-28042575 Msa1284880:intron 35.0%
TAGGAGTTAGAACATCTTTC+TGG - chr8_3:28042717-28042736 None:intergenic 35.0%
AACGAAATTGTGTCTTCAAG+CGG - chr8_3:28042783-28042802 None:intergenic 35.0%
!! TGTTTAGGTTGAAAACGGAA+AGG + chr8_3:28043093-28043112 Msa1284880:intron 35.0%
TGTACAATAGAGCCAAATGT+AGG + chr8_3:28043139-28043158 Msa1284880:CDS 35.0%
GTACAATAGAGCCAAATGTA+GGG + chr8_3:28043140-28043159 Msa1284880:CDS 35.0%
TCTCAGTAAATCTCAACGAA+TGG + chr8_3:28043204-28043223 Msa1284880:CDS 35.0%
TTTATCACATATTCGTGAGG+TGG + chr8_3:28043446-28043465 Msa1284880:CDS 35.0%
ATGAAAGTAAACTGGTGACA+AGG - chr8_3:28043506-28043525 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTAAAC+TGG - chr8_3:28043672-28043691 None:intergenic 35.0%
TCAAAACATCGTACAACCTA+AGG - chr8_3:28044035-28044054 None:intergenic 35.0%
GATTACGTCAATATCAGACT+TGG - chr8_3:28044096-28044115 None:intergenic 35.0%
! ATCGTTCTAAATGTTTGTGG+CGG + chr8_3:28044191-28044210 Msa1284880:intron 35.0%
!!! TTCACTGTGAAGAGTACTTT+TGG + chr8_3:28044292-28044311 Msa1284880:intron 35.0%
!!! TCACTGTGAAGAGTACTTTT+GGG + chr8_3:28044293-28044312 Msa1284880:intron 35.0%
! GGATTCACAATCTAAAGTCA+AGG + chr8_3:28044418-28044437 Msa1284880:intron 35.0%
CAAATTCAAGAAGCAGTGAT+GGG - chr8_3:28044461-28044480 None:intergenic 35.0%
ACAAATTCAAGAAGCAGTGA+TGG - chr8_3:28044462-28044481 None:intergenic 35.0%
TCACTGCTTCTTGAATTTGT+TGG + chr8_3:28044462-28044481 Msa1284880:intron 35.0%
AAAAATTCGTGTAGCACTCT+TGG + chr8_3:28044555-28044574 Msa1284880:CDS 35.0%
!!! TGACCTTAACGGATTTTGAA+AGG + chr8_3:28044599-28044618 Msa1284880:CDS 35.0%
!!! GACCTTAACGGATTTTGAAA+GGG + chr8_3:28044600-28044619 Msa1284880:CDS 35.0%
TTCCCTTTCAAAATCCGTTA+AGG - chr8_3:28044605-28044624 None:intergenic 35.0%
!!! GTCTGTTTTCTAGTTACACT+TGG + chr8_3:28044840-28044859 Msa1284880:intron 35.0%
!!! CTGTTTTCTAGTTACACTTG+GGG + chr8_3:28044842-28044861 Msa1284880:intron 35.0%
!!! TGTTTTCTAGTTACACTTGG+GGG + chr8_3:28044843-28044862 Msa1284880:intron 35.0%
ATCAGTAGTATTGTCATAGC+AGG + chr8_3:28044954-28044973 Msa1284880:intron 35.0%
GTCAAACTTTCCTTGTTCAA+TGG + chr8_3:28044976-28044995 Msa1284880:intron 35.0%
AATGGACAAACCATTGAACA+AGG - chr8_3:28044989-28045008 None:intergenic 35.0%
AACTATTACATCTTCCCACT+TGG + chr8_3:28045048-28045067 Msa1284880:intron 35.0%
! ACAATTTTTCCTCATTCACG+TGG + chr8_3:28045206-28045225 Msa1284880:intron 35.0%
! CAATTTTTCCTCATTCACGT+GGG + chr8_3:28045207-28045226 Msa1284880:intron 35.0%
! TTGGAAGGTTCTGACTATTT+AGG + chr8_3:28045247-28045266 Msa1284880:intron 35.0%
AAATCTACTTCTGGTACTGT+TGG + chr8_3:28045316-28045335 Msa1284880:intron 35.0%
TGGATTTACATTGCCTAGAT+TGG + chr8_3:28045336-28045355 Msa1284880:intron 35.0%
ATCAACCTAAAGACCAATCT+AGG - chr8_3:28045352-28045371 None:intergenic 35.0%
TGATTTCCTTTCAGCATGTT+TGG + chr8_3:28045368-28045387 Msa1284880:intron 35.0%
ACACTTCTGACAATTCATCA+TGG - chr8_3:28045512-28045531 None:intergenic 35.0%
! CATGTAATGTTGATTAGGAG+GGG + chr8_3:28045547-28045566 Msa1284880:intron 35.0%
AGTTTCTATGTAGGTTCGAT+CGG + chr8_3:28045691-28045710 Msa1284880:intron 35.0%
!! TGATGTTCTTGGTGATGATT+TGG - chr8_3:28046783-28046802 None:intergenic 35.0%
AATAGGTTCACACTAAGAAG+AGG - chr8_3:28046547-28046566 None:intergenic 35.0%
!! GAATTGGAGTGCTTTTGAAA+GGG - chr8_3:28046397-28046416 None:intergenic 35.0%
!! TGAATTGGAGTGCTTTTGAA+AGG - chr8_3:28046398-28046417 None:intergenic 35.0%
AATAGGTTCACACTAAGAAG+AGG + chr8_3:28046547-28046566 Msa1284880:intron 35.0%
!!! GACTAAGGTTGTTTTTGTGA+TGG + chr8_3:28046593-28046612 Msa1284880:intron 35.0%
!! TGATGTTCTTGGTGATGATT+TGG + chr8_3:28046783-28046802 Msa1284880:intron 35.0%
TCTCCTTCTTTATCAATGGA+AGG - chr8_3:28046814-28046833 None:intergenic 35.0%
ATCGTCTCCTTCTTTATCAA+TGG - chr8_3:28046818-28046837 None:intergenic 35.0%
TGATGAAGTGGAAGAAAATG+AGG + chr8_3:28046843-28046862 Msa1284880:CDS 35.0%
!! AAATCTAGATAATGGGCCAA+AGG - chr8_3:28047214-28047233 None:intergenic 35.0%
ACATCTTACTTGATTCTCTG+TGG - chr8_3:28047541-28047560 None:intergenic 35.0%
! GAGCAACATATGATCTTTTG+GGG + chr8_3:28047673-28047692 Msa1284880:intron 35.0%
!!! CTGCGAACTTATTTTACTTC+CGG + chr8_3:28047696-28047715 Msa1284880:intron 35.0%
!! TTATTTTACTTCCGGTGAGA+AGG + chr8_3:28047704-28047723 Msa1284880:intron 35.0%
! ATTTTCTCTTACCTTCTCAC+CGG - chr8_3:28047718-28047737 None:intergenic 35.0%
! ATGAAACAGGATGCTCTAAA+CGG - chr8_3:28047765-28047784 None:intergenic 35.0%
CAGAACCATTTGTCAACAAA+AGG - chr8_3:28048159-28048178 None:intergenic 35.0%
! CTTTTGTTGACAAATGGTTC+TGG + chr8_3:28048157-28048176 Msa1284880:intron 35.0%
ATTCTGTTTGGTCAATCAGT+CGG - chr8_3:28048241-28048260 None:intergenic 35.0%
TGACAATTATAAAGGAACGG+AGG + chr8_3:28048690-28048709 Msa1284880:intron 35.0%
GACAATTATAAAGGAACGGA+GGG + chr8_3:28048691-28048710 Msa1284880:intron 35.0%
! AACAAAGGTGGAAGTGATTT+TGG + chr8_3:28048759-28048778 Msa1284880:intron 35.0%
AGCAGGCTTAAATATGCAAA+TGG + chr8_3:28048970-28048989 Msa1284880:intron 35.0%
ATGGTCCCTAAAATATTTGC+AGG + chr8_3:28048989-28049008 Msa1284880:intron 35.0%
TGGTCCCTAAAATATTTGCA+GGG + chr8_3:28048990-28049009 Msa1284880:intron 35.0%
! AAGCTCCGTCAATTTTCTTT+TGG - chr8_3:28049034-28049053 None:intergenic 35.0%
GTTAGAGTTAGACCAAGAAA+AGG + chr8_3:28049141-28049160 Msa1284880:intron 35.0%
! GTTAGACCAAGAAAAGGTAT+AGG + chr8_3:28049147-28049166 Msa1284880:intron 35.0%
CTACTTAGTTGGATAAAGCT+TGG + chr8_3:28049253-28049272 Msa1284880:intron 35.0%
TTGTTGCTATATCCTAGAAC+TGG + chr8_3:28049278-28049297 Msa1284880:intron 35.0%
AATCATTCTGACTCATGTAC+TGG + chr8_3:28049312-28049331 Msa1284880:intron 35.0%
ATCATTCTGACTCATGTACT+GGG + chr8_3:28049313-28049332 Msa1284880:intron 35.0%
AATATGAAAGCTTGCCTTGA+TGG + chr8_3:28049344-28049363 Msa1284880:intron 35.0%
TCAATTTCCCAAATCCATCA+AGG - chr8_3:28049361-28049380 None:intergenic 35.0%
AAAAGGCAGCCAAGTTTATT+GGG - chr8_3:28049511-28049530 None:intergenic 35.0%
AAAAAGGCAGCCAAGTTTAT+TGG - chr8_3:28049512-28049531 None:intergenic 35.0%
TGCAAACTATAACGAGCAAT+TGG - chr8_3:28049874-28049893 None:intergenic 35.0%
! TGCTTAGTTAAACTTTGGAG+AGG + chr8_3:28049994-28050013 Msa1284880:three_prime_UTR 35.0%
GCTTTGGTTGAACTCCATAA+AGG - chr8_3:28040529-28040548 None:intergenic 40.0%
ATAAGCATGAGTCTCAAAGC+TGG + chr8_3:28040572-28040591 Msa1284880:CDS 40.0%
AGTCTCAAAGCTGGTATTGT+TGG + chr8_3:28040581-28040600 Msa1284880:CDS 40.0%
AGGGTAGATTTGCCAACATT+AGG - chr8_3:28040611-28040630 None:intergenic 40.0%
CGGGTCATGTAAACGAAAAA+AGG - chr8_3:28040662-28040681 None:intergenic 40.0%
TACTTAAACACCGAAACACG+TGG - chr8_3:28040806-28040825 None:intergenic 40.0%
TACGCTATAAACTAGCGCTT+TGG - chr8_3:28040909-28040928 None:intergenic 40.0%
TAAAGGACCAAAGTGGTTGA+CGG - chr8_3:28041328-28041347 None:intergenic 40.0%
CCTAACATAAAGGACCAAAG+TGG - chr8_3:28041335-28041354 None:intergenic 40.0%
CCACTTTGGTCCTTTATGTT+AGG + chr8_3:28041332-28041351 Msa1284880:intron 40.0%
ATGGTGAGGGTAAAAATGAG+AGG - chr8_3:28041729-28041748 None:intergenic 40.0%
! CTGTGATCGAGTCTTTTTGA+TGG + chr8_3:28041955-28041974 Msa1284880:intron 40.0%
TACAAACAAGGACAGCTCAT+TGG - chr8_3:28041991-28042010 None:intergenic 40.0%
GTTCCTAGTGTTCGATTCTT+AGG - chr8_3:28042077-28042096 None:intergenic 40.0%
! ATAGGACGTGTTTTGCTAAG+GGG + chr8_3:28042557-28042576 Msa1284880:intron 40.0%
! AGAGAAGGCTTTAGTGTGAA+AGG + chr8_3:28042614-28042633 Msa1284880:intron 40.0%
CTCTTAGGTAACATCGTGTT+AGG - chr8_3:28042736-28042755 None:intergenic 40.0%
GTCAACTATACTTTGTGGTG+AGG + chr8_3:28042853-28042872 Msa1284880:intron 40.0%
TATACTTTGTGGTGAGGTAC+TGG + chr8_3:28042859-28042878 Msa1284880:intron 40.0%
ACACCAACAATCCCTACATT+TGG - chr8_3:28043154-28043173 None:intergenic 40.0%
TCTACAAACTCTATGGATGC+TGG - chr8_3:28043232-28043251 None:intergenic 40.0%
!! AGATATTGCTGGCCTTGTAA+AGG + chr8_3:28043249-28043268 Msa1284880:CDS 40.0%
!! GATATTGCTGGCCTTGTAAA+GGG + chr8_3:28043250-28043269 Msa1284880:CDS 40.0%
TAAGCACTTGTGAGTCTGTT+TGG + chr8_3:28043610-28043629 Msa1284880:intron 40.0%
AAGCACTTGTGAGTCTGTTT+GGG + chr8_3:28043611-28043630 Msa1284880:intron 40.0%
AGTCTGTTTGGGAGATCTTA+TGG + chr8_3:28043622-28043641 Msa1284880:intron 40.0%
AAGCTAAACTGGAGAGCTTA+TGG - chr8_3:28043661-28043680 None:intergenic 40.0%
!! CTACTGATCTAGGCTTTGTT+TGG - chr8_3:28043795-28043814 None:intergenic 40.0%
ACAAAGCCTAGATCAGTAGT+AGG + chr8_3:28043796-28043815 Msa1284880:intron 40.0%
ACATATTGCTTAGCAGAGCT+TGG + chr8_3:28043924-28043943 Msa1284880:intron 40.0%
AAACATCGTACAACCTAAGG+TGG - chr8_3:28044032-28044051 None:intergenic 40.0%
! TGTTTTCACAGACTTAGACC+AGG + chr8_3:28044127-28044146 Msa1284880:CDS 40.0%
ACTCTTCACAGTGAAGAGAA+AGG - chr8_3:28044287-28044306 None:intergenic 40.0%
AATCTGCATTTCTTCGAACG+AGG - chr8_3:28044360-28044379 None:intergenic 40.0%
! GTTTGAAGCATCAGCTAGAT+CGG - chr8_3:28044692-28044711 None:intergenic 40.0%
TCACATGTTATATAGAGCCC+AGG + chr8_3:28045020-28045039 Msa1284880:intron 40.0%
GGATGAACTTGAAAGCTGAA+AGG - chr8_3:28045160-28045179 None:intergenic 40.0%
!! AGCTTTCAAGTTCATCCTCA+AGG + chr8_3:28045163-28045182 Msa1284880:intron 40.0%
GATGTCTGAAAGTGGTCATA+TGG - chr8_3:28045275-28045294 None:intergenic 40.0%
! GTAGATTTTCCTCATGGAAG+TGG - chr8_3:28045304-28045323 None:intergenic 40.0%
! CCAGAAGTAGATTTTCCTCA+TGG - chr8_3:28045310-28045329 None:intergenic 40.0%
CCATGAGGAAAATCTACTTC+TGG + chr8_3:28045307-28045326 Msa1284880:intron 40.0%
!! CATTGCCTAGATTGGTCTTT+AGG + chr8_3:28045344-28045363 Msa1284880:intron 40.0%
TAGCAACCAAACATGCTGAA+AGG - chr8_3:28045377-28045396 None:intergenic 40.0%
TCAGCATGTTTGGTTGCTAA+AGG + chr8_3:28045378-28045397 Msa1284880:intron 40.0%
CAGCATGTTTGGTTGCTAAA+GGG + chr8_3:28045379-28045398 Msa1284880:intron 40.0%
TCAGGAACGAGTTTCTATGT+AGG + chr8_3:28045682-28045701 Msa1284880:intron 40.0%
! GATGGGTAGTCTAGTTTCTA+TGG - chr8_3:28046931-28046950 None:intergenic 40.0%
ACATCATTCATTCCCATGTC+AGG + chr8_3:28045949-28045968 Msa1284880:intron 40.0%
GATGAATTTCCTCCTGACAT+GGG - chr8_3:28046886-28046905 None:intergenic 40.0%
TGATGAATTTCCTCCTGACA+TGG - chr8_3:28046885-28046904 None:intergenic 40.0%
TGTCAGGAGGAAATTCATCA+AGG + chr8_3:28045965-28045984 Msa1284880:intron 40.0%
TGATGAAGTGGAAGAGAATG+AGG - chr8_3:28046007-28046026 None:intergenic 40.0%
! AGACGATGATGATGATGAAG+TGG - chr8_3:28046831-28046850 None:intergenic 40.0%
ATCGTCTCCTTCTTCATCAA+TGG + chr8_3:28046032-28046051 Msa1284880:intron 40.0%
TCTCCTTCTTCATCAATGGA+AGG + chr8_3:28046036-28046055 Msa1284880:intron 40.0%
!! GCTAGTATTGGTGATGTTCT+TGG - chr8_3:28046772-28046791 None:intergenic 40.0%
ATCTCACTTGATGTTGGACA+AGG - chr8_3:28046748-28046767 None:intergenic 40.0%
GATGACATCTCACTTGATGT+TGG - chr8_3:28046742-28046761 None:intergenic 40.0%
AATCTGGAGGATGATGAAGA+TGG - chr8_3:28046135-28046154 None:intergenic 40.0%
!! GAGAAAGAGTGCTAAGTATG+AGG - chr8_3:28046202-28046221 None:intergenic 40.0%
GAAGCAACTCACGATGAATA+AGG - chr8_3:28046268-28046287 None:intergenic 40.0%
AGCTACATGTCGAACTGAAT+TGG - chr8_3:28046413-28046432 None:intergenic 40.0%
CATCAGGATGTGAACTGAAT+TGG + chr8_3:28046433-28046452 Msa1284880:intron 40.0%
!! TGAATTGGAGTGCTGTTGAA+AGG + chr8_3:28046448-28046467 Msa1284880:intron 40.0%
!! GAATTGGAGTGCTGTTGAAA+GGG + chr8_3:28046449-28046468 Msa1284880:intron 40.0%
!! GAGAAAGAGTGCTAACTATG+AGG + chr8_3:28046648-28046667 Msa1284880:intron 40.0%
AATGTGGAGGATGATGAAGA+TGG + chr8_3:28046715-28046734 Msa1284880:intron 40.0%
GATGACATCTCACTTGATGT+TGG + chr8_3:28046742-28046761 Msa1284880:intron 40.0%
ATCTCACTTGATGTTGGACA+AGG + chr8_3:28046748-28046767 Msa1284880:intron 40.0%
!! GCTAGTATTGGTGATGTTCT+TGG + chr8_3:28046772-28046791 Msa1284880:intron 40.0%
CTGCCTTCCATTGATAAAGA+AGG + chr8_3:28046808-28046827 Msa1284880:CDS 40.0%
! AGACGATGATGATGATGAAG+TGG + chr8_3:28046831-28046850 Msa1284880:CDS 40.0%
TGATGAATTTCCTCCTGACA+TGG + chr8_3:28046885-28046904 Msa1284880:CDS 40.0%
GATGAATTTCCTCCTGACAT+GGG + chr8_3:28046886-28046905 Msa1284880:CDS 40.0%
ACATCATTCATTCCCATGTC+AGG - chr8_3:28045949-28045968 None:intergenic 40.0%
! GATGGGTAGTCTAGTTTCTA+TGG + chr8_3:28046931-28046950 Msa1284880:intron 40.0%
TTGTCCTCTTAGACTTAGAG+TGG + chr8_3:28046955-28046974 Msa1284880:intron 40.0%
TGTCCTCTTAGACTTAGAGT+GGG + chr8_3:28046956-28046975 Msa1284880:intron 40.0%
TAAAGTCGGGGAATGTAACA+CGG - chr8_3:28046992-28047011 None:intergenic 40.0%
AGTTTCTACGTAGGTTCGAT+CGG - chr8_3:28047029-28047048 None:intergenic 40.0%
ACGATTAAAACACTGCACAG+TGG - chr8_3:28047078-28047097 None:intergenic 40.0%
!!! GACCAGTTTTAAACAGTCTG+AGG - chr8_3:28047116-28047135 None:intergenic 40.0%
!! TCTCTTGGTGTTAGTGAAAG+TGG + chr8_3:28047633-28047652 Msa1284880:intron 40.0%
CATCCTGTTTCATAAAGCAC+TGG + chr8_3:28047772-28047791 Msa1284880:intron 40.0%
AATGTATCCACAGGAGACAA+AGG + chr8_3:28047949-28047968 Msa1284880:intron 40.0%
AGACGGTAGAATTTCGTGTT+AGG + chr8_3:28049066-28049085 Msa1284880:intron 40.0%
TTAGGTGACTCAGACATATG+TGG + chr8_3:28049084-28049103 Msa1284880:intron 40.0%
! CAATGGCCTATACCTTTTCT+TGG - chr8_3:28049156-28049175 None:intergenic 40.0%
GTATAGGCCATTGAGAGAAA+TGG + chr8_3:28049163-28049182 Msa1284880:intron 40.0%
!! AAAGCTTGCCTTGATGGATT+TGG + chr8_3:28049350-28049369 Msa1284880:intron 40.0%
!! AAGCTTGCCTTGATGGATTT+GGG + chr8_3:28049351-28049370 Msa1284880:intron 40.0%
TATAACGACTTTGTTGCTGC+TGG + chr8_3:28049430-28049449 Msa1284880:CDS 40.0%
CATTTCCCTCCCAATAAACT+TGG + chr8_3:28049499-28049518 Msa1284880:intron 40.0%
TGTTTGCAGTTGAGATCTGA+AGG + chr8_3:28049715-28049734 Msa1284880:intron 40.0%
! ACTTACGACGGCATTGAAGA+GGG - chr8_3:28040630-28040649 None:intergenic 45.0%
!! AATCAGAAGTGTCGGTGCTA+CGG - chr8_3:28040682-28040701 None:intergenic 45.0%
GTGTTAGTGTCCACGTGTTT+CGG + chr8_3:28040793-28040812 Msa1284880:intron 45.0%
GTTGACGGAGGAAGAGTTAA+GGG - chr8_3:28041313-28041332 None:intergenic 45.0%
ACCTCTACTTTGTGTGAGTC+TGG - chr8_3:28041688-28041707 None:intergenic 45.0%
TCCACCACGCTATAACTCTA+CGG - chr8_3:28042206-28042225 None:intergenic 45.0%
TGGCAAATTGGCGATGTGTT+AGG + chr8_3:28042424-28042443 Msa1284880:intron 45.0%
! ACGTGTTTTGCTAAGGGGAA+GGG + chr8_3:28042562-28042581 Msa1284880:intron 45.0%
TGTGAAAGGAGAAGCTCTTC+TGG + chr8_3:28042628-28042647 Msa1284880:intron 45.0%
GTGAAAGGAGAAGCTCTTCT+GGG + chr8_3:28042629-28042648 Msa1284880:intron 45.0%
TGAAAGGAGAAGCTCTTCTG+GGG + chr8_3:28042630-28042649 Msa1284880:intron 45.0%
GAAATTGTGTCTTCAAGCGG+CGG - chr8_3:28042780-28042799 None:intergenic 45.0%
GAGCCAAATGTAGGGATTGT+TGG + chr8_3:28043148-28043167 Msa1284880:CDS 45.0%
!! TACTGAGATCAGAGAGCACT+TGG - chr8_3:28043192-28043211 None:intergenic 45.0%
!! CTTGACTTGCACCCTTTACA+AGG - chr8_3:28043264-28043283 None:intergenic 45.0%
! CTTGTAAAGGGTGCAAGTCA+AGG + chr8_3:28043262-28043281 Msa1284880:CDS 45.0%
CTTCAACTGTTACAGGGTCT+CGG + chr8_3:28043414-28043433 Msa1284880:intron 45.0%
!! AAGCAGTTGGTAAACTGACC+TGG - chr8_3:28044148-28044167 None:intergenic 45.0%
AGAGGCAGAAAAGTCTGCAT+TGG + chr8_3:28044531-28044550 Msa1284880:CDS 45.0%
ATTCGTGTAGCACTCTTGGA+TGG + chr8_3:28044559-28044578 Msa1284880:CDS 45.0%
TGCACGATCTGTGACCTTAA+CGG + chr8_3:28044588-28044607 Msa1284880:CDS 45.0%
ATCTTCCCACTTGGCAATGT+AGG + chr8_3:28045057-28045076 Msa1284880:intron 45.0%
CACTACCTACATTGCCAAGT+GGG - chr8_3:28045065-28045084 None:intergenic 45.0%
TCACTACCTACATTGCCAAG+TGG - chr8_3:28045066-28045085 None:intergenic 45.0%
TATACACTGCTCTCGTGAAG+TGG + chr8_3:28045106-28045125 Msa1284880:intron 45.0%
CTCGGATATTAGGAACCTTG+AGG - chr8_3:28045181-28045200 None:intergenic 45.0%
CTCAAGGTTCCTAATATCCG+AGG + chr8_3:28045179-28045198 Msa1284880:intron 45.0%
! GATTTTCCTCATGGAAGTGG+AGG - chr8_3:28045301-28045320 None:intergenic 45.0%
CAGTCTATCACAATGCAGTC+AGG + chr8_3:28045664-28045683 Msa1284880:intron 45.0%
TAAAGTCGGGGAACGTAACA+CGG + chr8_3:28045728-28045747 Msa1284880:intron 45.0%
TCATTCATTCCCATGTCAGG+AGG + chr8_3:28045952-28045971 Msa1284880:intron 45.0%
CTGCCTTCCATTGATGAAGA+AGG - chr8_3:28046042-28046061 None:intergenic 45.0%
! GTTGGACAAGGTGCTAGTAT+TGG - chr8_3:28046760-28046779 None:intergenic 45.0%
!! AGAGTGGATTGAGAATCTGG+AGG - chr8_3:28046148-28046167 None:intergenic 45.0%
!! GGAAGAGTGGATTGAGAATC+TGG - chr8_3:28046151-28046170 None:intergenic 45.0%
CCACTCTTCCGTATCATCTT+CGG + chr8_3:28046161-28046180 Msa1284880:intron 45.0%
AGTTCGACATGTAGCTCATC+AGG + chr8_3:28046417-28046436 Msa1284880:intron 45.0%
GAAGCAACTCACGATGACTA+AGG + chr8_3:28046578-28046597 Msa1284880:intron 45.0%
!! GGAAGAGTGGATTGAGAATG+TGG + chr8_3:28046699-28046718 Msa1284880:intron 45.0%
!! AGAGTGGATTGAGAATGTGG+AGG + chr8_3:28046702-28046721 Msa1284880:intron 45.0%
! GTTGGACAAGGTGCTAGTAT+TGG + chr8_3:28046760-28046779 Msa1284880:intron 45.0%
TCATTCATTCCCATGTCAGG+AGG - chr8_3:28045952-28045971 None:intergenic 45.0%
GAACCCACTCTAAGTCTAAG+AGG - chr8_3:28046962-28046981 None:intergenic 45.0%
TCAGGAACGAGTTTCTACGT+AGG - chr8_3:28047038-28047057 None:intergenic 45.0%
GTGATGCGAACAATGTAGTC+AGG - chr8_3:28047056-28047075 None:intergenic 45.0%
!! GTTTTAAACAGTCTGAGGCC+AGG - chr8_3:28047111-28047130 None:intergenic 45.0%
! GGCCTCAGACTGTTTAAAAC+TGG + chr8_3:28047111-28047130 Msa1284880:intron 45.0%
ATACCAAGATGGCTAGGACT+AGG - chr8_3:28047319-28047338 None:intergenic 45.0%
GCTTTCTGAATTAGCGATCG+AGG + chr8_3:28047590-28047609 Msa1284880:intron 45.0%
GGTGTTAGTGAAAGTGGTCT+TGG + chr8_3:28047639-28047658 Msa1284880:intron 45.0%
GTGCCAGTGCTTTATGAAAC+AGG - chr8_3:28047778-28047797 None:intergenic 45.0%
AAGGCATGGACAATACTTGC+AGG + chr8_3:28047968-28047987 Msa1284880:CDS 45.0%
TGAATAACTCCAGCAGCTTG+AGG - chr8_3:28048338-28048357 None:intergenic 45.0%
TGATGCTTACTGTCTCTGCT+CGG - chr8_3:28048385-28048404 None:intergenic 45.0%
TGTAGACTTGAAAGTGAGCC+AGG + chr8_3:28048876-28048895 Msa1284880:intron 45.0%
GTAGACTTGAAAGTGAGCCA+GGG + chr8_3:28048877-28048896 Msa1284880:intron 45.0%
TACTGAAAACCAGATTGCCC+TGG - chr8_3:28048897-28048916 None:intergenic 45.0%
GTGACTCAGACATATGTGGA+AGG + chr8_3:28049088-28049107 Msa1284880:intron 45.0%
ACTCAGACATATGTGGAAGG+AGG + chr8_3:28049091-28049110 Msa1284880:intron 45.0%
CTCAGACATATGTGGAAGGA+GGG + chr8_3:28049092-28049111 Msa1284880:intron 45.0%
GACGCTTCCATTTCTCTCAA+TGG - chr8_3:28049173-28049192 None:intergenic 45.0%
TGTAGCCGTCTCTACTTAGT+TGG + chr8_3:28049242-28049261 Msa1284880:intron 45.0%
!! TTTGTTGCTGCTGGTTCACT+TGG + chr8_3:28049439-28049458 Msa1284880:CDS 45.0%
TCGAACTTACCACTCTCAGA+TGG + chr8_3:28049793-28049812 Msa1284880:three_prime_UTR 45.0%
CGAACTTACCACTCTCAGAT+GGG + chr8_3:28049794-28049813 Msa1284880:three_prime_UTR 45.0%
!! ATTATATTATGAAATATAAA+CGG + chr8_3:28042342-28042361 Msa1284880:intron 5.0%
! GACTTACGACGGCATTGAAG+AGG - chr8_3:28040631-28040650 None:intergenic 50.0%
AGGGAGAGAGTGACTTACGA+CGG - chr8_3:28040642-28040661 None:intergenic 50.0%
!! ATCAGAAGTGTCGGTGCTAC+GGG - chr8_3:28040681-28040700 None:intergenic 50.0%
ATGTCCGACACAGACACTTG+CGG + chr8_3:28040722-28040741 Msa1284880:intron 50.0%
GTAACCGCAAGTGTCTGTGT+CGG - chr8_3:28040729-28040748 None:intergenic 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - chr8_3:28041314-28041333 None:intergenic 50.0%
TCTTCCTCCGTCAACCACTT+TGG + chr8_3:28041318-28041337 Msa1284880:intron 50.0%
GCCAGACTCACACAAAGTAG+AGG + chr8_3:28041684-28041703 Msa1284880:intron 50.0%
! GACGTGTTTTGCTAAGGGGA+AGG + chr8_3:28042561-28042580 Msa1284880:intron 50.0%
! TGTTTTGCTAAGGGGAAGGG+AGG + chr8_3:28042565-28042584 Msa1284880:intron 50.0%
! AGAAGATAGCCTTGCACGCA+AGG - chr8_3:28042659-28042678 None:intergenic 50.0%
!! TGAGATCAGAGAGCACTTGG+AGG - chr8_3:28043189-28043208 None:intergenic 50.0%
! TGAGGTGGACTCCATACTTC+AGG + chr8_3:28043461-28043480 Msa1284880:CDS 50.0%
GCTTAGCAGAGCTTGGAGTT+CGG + chr8_3:28043931-28043950 Msa1284880:intron 50.0%
AGGTGGTAATCATCGACCCA+TGG - chr8_3:28044015-28044034 None:intergenic 50.0%
GGGTCGATGATTACCACCTT+AGG + chr8_3:28044016-28044035 Msa1284880:intron 50.0%
GTTAAGGTCACAGATCGTGC+AGG - chr8_3:28044589-28044608 None:intergenic 50.0%
GTTGCATCTGAGTTGCAGTC+TGG + chr8_3:28044739-28044758 Msa1284880:CDS 50.0%
AGGAAGAACCCACGTGAATG+AGG - chr8_3:28045218-28045237 None:intergenic 50.0%
TTCACGTGGGTTCTTCCTCA+AGG + chr8_3:28045220-28045239 Msa1284880:intron 50.0%
! GGTTCTTCCTCAAGGTGTCT+TGG + chr8_3:28045228-28045247 Msa1284880:intron 50.0%
! CTTCCTCAAGGTGTCTTGGA+AGG + chr8_3:28045232-28045251 Msa1284880:intron 50.0%
GAACCTTCCAAGACACCTTG+AGG - chr8_3:28045238-28045257 None:intergenic 50.0%
! GGAGGCATGATGTCTGAAAG+TGG - chr8_3:28045283-28045302 None:intergenic 50.0%
ATCATGCCTCCACTTCCATG+AGG + chr8_3:28045292-28045311 Msa1284880:intron 50.0%
TCTATGTAGGTTCGATCGGC+CGG + chr8_3:28045695-28045714 Msa1284880:intron 50.0%
CCGAAGATGATACGGAAGAG+TGG - chr8_3:28046164-28046183 None:intergenic 50.0%
CCACTCTTCCGCATCATCTT+CGG - chr8_3:28046689-28046708 None:intergenic 50.0%
CACATGTGGTACACACTCAC+GGG - chr8_3:28047142-28047161 None:intergenic 50.0%
CCACATGTGGTACACACTCA+CGG - chr8_3:28047143-28047162 None:intergenic 50.0%
!! AGTCGAGGTTTTGTGCAAGG+AGG - chr8_3:28047191-28047210 None:intergenic 50.0%
!! AGGAGTCGAGGTTTTGTGCA+AGG - chr8_3:28047194-28047213 None:intergenic 50.0%
GCACAAAACCTCGACTCCTT+TGG + chr8_3:28047195-28047214 Msa1284880:intron 50.0%
!! ATAATGGGCCAAAGGAGTCG+AGG - chr8_3:28047206-28047225 None:intergenic 50.0%
CTTCCTAGTCCTAGCCATCT+TGG + chr8_3:28047313-28047332 Msa1284880:intron 50.0%
ATCCACAGGAGACAAAGGCA+TGG + chr8_3:28047954-28047973 Msa1284880:intron 50.0%
ACGGAGGGAGTAATAGTGCA+TGG + chr8_3:28048706-28048725 Msa1284880:intron 50.0%
GGGAGTAATAGTGCATGGCT+TGG + chr8_3:28048711-28048730 Msa1284880:intron 50.0%
! CTTGGTGCAGCACGAGAAAA+AGG + chr8_3:28049457-28049476 Msa1284880:CDS 50.0%
GGCAGCCAAGTTTATTGGGA+GGG - chr8_3:28049507-28049526 None:intergenic 50.0%
AGGCAGCCAAGTTTATTGGG+AGG - chr8_3:28049508-28049527 None:intergenic 50.0%
AGTTTGAACCAAGTCCGGCA+GGG - chr8_3:28049635-28049654 None:intergenic 50.0%
AAGTTTGAACCAAGTCCGGC+AGG - chr8_3:28049636-28049655 None:intergenic 50.0%
!! CACTGATTCCCATCTGAGAG+TGG - chr8_3:28049805-28049824 None:intergenic 50.0%
CACTCTCAGATGGGAATCAG+TGG + chr8_3:28049803-28049822 Msa1284880:three_prime_UTR 50.0%
CAATCCATGGACTCCTAGGT+TGG - chr8_3:28049936-28049955 None:intergenic 50.0%
GTCTCAATCCATGGACTCCT+AGG - chr8_3:28049940-28049959 None:intergenic 50.0%
AGGACCAAAGTGGTTGACGG+AGG - chr8_3:28041325-28041344 None:intergenic 55.0%
GAGGCCGTAGAGTTATAGCG+TGG + chr8_3:28042199-28042218 Msa1284880:intron 55.0%
GCCGTAGAGTTATAGCGTGG+TGG + chr8_3:28042202-28042221 Msa1284880:intron 55.0%
AGCACTTGGAGGCGAGAATC+TGG - chr8_3:28043178-28043197 None:intergenic 55.0%
! AAAGGGTGCAAGTCAAGGCG+AGG + chr8_3:28043267-28043286 Msa1284880:CDS 55.0%
ACACTGCTCTCGTGAAGTGG+TGG + chr8_3:28045109-28045128 Msa1284880:intron 55.0%
CCGAAGATGATGCGGAAGAG+TGG + chr8_3:28046686-28046705 Msa1284880:intron 55.0%
TCTACGTAGGTTCGATCGGC+CGG - chr8_3:28047025-28047044 None:intergenic 55.0%
CCGTGAGTGTGTACCACATG+TGG + chr8_3:28047140-28047159 Msa1284880:intron 55.0%
GTCCATGCCTTTGTCTCCTG+TGG - chr8_3:28047959-28047978 None:intergenic 55.0%
ATGACTGCACCTCAAGCTGC+TGG + chr8_3:28048326-28048345 Msa1284880:intron 55.0%
GAAAGTGAGCCAGGGCAATC+TGG + chr8_3:28048885-28048904 Msa1284880:intron 55.0%
GTTTGAACCAAGTCCGGCAG+GGG - chr8_3:28049634-28049653 None:intergenic 55.0%
GCGAGAGAATGCTCCAACCT+AGG + chr8_3:28049920-28049939 Msa1284880:three_prime_UTR 55.0%
TGCTCCAACCTAGGAGTCCA+TGG + chr8_3:28049929-28049948 Msa1284880:three_prime_UTR 55.0%
CTGGGGTAACCTTGCGTGCA+AGG + chr8_3:28042647-28042666 Msa1284880:intron 60.0%
CCGACTTTACGTCCCTTCGC+CGG - chr8_3:28047003-28047022 None:intergenic 60.0%
CCGGCGAAGGGACGTAAAGT+CGG + chr8_3:28045714-28045733 Msa1284880:intron 60.0%
CGGCGAAGGGACGTAAAGTC+GGG + chr8_3:28045715-28045734 Msa1284880:intron 60.0%
GGCGAAGGGACGTAAAGTCG+GGG + chr8_3:28045716-28045735 Msa1284880:intron 60.0%
GGCGAAGGGACGTAAAGTCG+GGG - chr8_3:28045716-28045735 None:intergenic 60.0%
CGGCGAAGGGACGTAAAGTC+GGG - chr8_3:28045715-28045734 None:intergenic 60.0%
CCGGCGAAGGGACGTAAAGT+CGG - chr8_3:28045714-28045733 None:intergenic 60.0%
CCGACTTTACGTCCCTTCGC+CGG + chr8_3:28047003-28047022 Msa1284880:intron 60.0%
!! ATTCCAGAGGGCGCCACATG+TGG - chr8_3:28047156-28047175 None:intergenic 60.0%
ACCATTTCCCTGTCCCCTGC+CGG + chr8_3:28049618-28049637 Msa1284880:intron 60.0%
TAGGTTCGATCGGCCGGCGA+AGG + chr8_3:28045701-28045720 Msa1284880:intron 65.0%
AGGTTCGATCGGCCGGCGAA+GGG + chr8_3:28045702-28045721 Msa1284880:intron 65.0%
AGGTTCGATCGGCCGGCGAA+GGG - chr8_3:28045702-28045721 None:intergenic 65.0%
TAGGTTCGATCGGCCGGCGA+AGG - chr8_3:28045701-28045720 None:intergenic 65.0%
GTACCACATGTGGCGCCCTC+TGG + chr8_3:28047150-28047169 Msa1284880:intron 65.0%
GGCAGGGGACAGGGAAATGG+TGG - chr8_3:28049619-28049638 None:intergenic 65.0%
TCCGGCAGGGGACAGGGAAA+TGG - chr8_3:28049622-28049641 None:intergenic 65.0%
ACCAAGTCCGGCAGGGGACA+GGG - chr8_3:28049628-28049647 None:intergenic 65.0%
AACCAAGTCCGGCAGGGGAC+AGG - chr8_3:28049629-28049648 None:intergenic 65.0%
TCCCTGTCCCCTGCCGGACT+TGG + chr8_3:28049624-28049643 Msa1284880:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 28040288 28050132 28040288 ID=Msa1284880;Name=Msa1284880
chr8_3 mRNA 28040288 28050132 28040288 ID=Msa1284880-mRNA-1;Parent=Msa1284880;Name=Msa1284880-mRNA-1;_AED=0.14;_eAED=0.14;_QI=152|0.44|0.8|0.8|0.66|0.9|10|340|373
chr8_3 exon 28040288 28040643 28040288 ID=Msa1284880-mRNA-1:exon:9511;Parent=Msa1284880-mRNA-1
chr8_3 exon 28043100 28043288 28043100 ID=Msa1284880-mRNA-1:exon:9512;Parent=Msa1284880-mRNA-1
chr8_3 exon 28043429 28043482 28043429 ID=Msa1284880-mRNA-1:exon:9513;Parent=Msa1284880-mRNA-1
chr8_3 exon 28044038 28044148 28044038 ID=Msa1284880-mRNA-1:exon:9514;Parent=Msa1284880-mRNA-1
chr8_3 exon 28044529 28044783 28044529 ID=Msa1284880-mRNA-1:exon:9515;Parent=Msa1284880-mRNA-1
chr8_3 exon 28046808 28046918 28046808 ID=Msa1284880-mRNA-1:exon:9516;Parent=Msa1284880-mRNA-1
chr8_3 exon 28047511 28047551 28047511 ID=Msa1284880-mRNA-1:exon:9517;Parent=Msa1284880-mRNA-1
chr8_3 exon 28047962 28047989 28047962 ID=Msa1284880-mRNA-1:exon:9518;Parent=Msa1284880-mRNA-1
chr8_3 exon 28049424 28049483 28049424 ID=Msa1284880-mRNA-1:exon:9519;Parent=Msa1284880-mRNA-1
chr8_3 exon 28049724 28050132 28049724 ID=Msa1284880-mRNA-1:exon:9520;Parent=Msa1284880-mRNA-1
chr8_3 five_prime_UTR 28040288 28040439 28040288 ID=Msa1284880-mRNA-1:five_prime_utr;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28040440 28040643 28040440 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28043100 28043288 28043100 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28043429 28043482 28043429 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28044038 28044148 28044038 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28044529 28044783 28044529 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28046808 28046918 28046808 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28047511 28047551 28047511 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28047962 28047989 28047962 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28049424 28049483 28049424 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 CDS 28049724 28049792 28049724 ID=Msa1284880-mRNA-1:cds;Parent=Msa1284880-mRNA-1
chr8_3 three_prime_UTR 28049793 28050132 28049793 ID=Msa1284880-mRNA-1:three_prime_utr;Parent=Msa1284880-mRNA-1
Gene Sequence

>Msa1284880

ATGGCAACAAAACTAGTACCCAGTTTAGTTCATCCTTTGAAATCAAGGTTTTTCGGCAATACACTTTTAACCAAACAATCTTTTCACCTTTATGGAGTTCAACCAAAGCTTTCATATTCTTCTTCTTCTAAGATAAGCATGAGTCTCAAAGCTGGTATTGTTGGTCTTCCTAATGTTGGCAAATCTACCCTCTTCAATGCCGTCGTTGAAAACGGAAAGGCTCAAGCTGCCAATTTTCCCTTTTGTACAATAGAGCCAAATGTAGGGATTGTTGGTGTTCCAGATTCTCGCCTCCAAGTGCTCTCTGATCTCAGTAAATCTCAACGAATGGTTCCAGCATCCATAGAGTTTGTAGATATTGCTGGCCTTGTAAAGGGTGCAAGTCAAGGCGAGGGTCTCGGCAATAAATTTTTATCACATATTCGTGAGGTGGACTCCATACTTCAGGTTGTACGATGTTTTGATGATAATGACATTATTCATGTGAACGGAAAAGTTGATCCCAAGTCTGATATTGACGTAATCAACTTGGAGCTTGTTTTCACAGACTTAGACCAGGAAGAGGCAGAAAAGTCTGCATTGGAAAAAATTCGTGTAGCACTCTTGGATGGAAAACCTGCACGATCTGTGACCTTAACGGATTTTGAAAGGGAATCTGTAAAGCAACTTTGCTTGCTCACCATGAAACCCATTATATATGTGGCAAATGTTGCGGAGTCCGATCTAGCTGATGCTTCAAACAATGATTACGTTACAGGTGTCAAGAATGTTGCATCTGAGTTGCAGTCTGGAATTGTAACAATTTCAGCACAGCTGCCTTCCATTGATAAAGAAGGAGACGATGATGATGATGAAGTGGAAGAAAATGAGGATGAATATGATGATGAGCTTGATGAATTTCCTCCTGACATGGGAATGAATGATCAATTATTGACATTCTTGTTATCATCACCACAGAGAATCAAGAGACAAAGGCATGGACAATACTTGCAGGTGGCTTATAACGACTTTGTTGCTGCTGGTTCACTTGGTGCAGCACGAGAAAAAGGACTCTTGAGATCTGAAGGTAAAGACTACATTGTACAAGAAGGAGATGTAATGCTGTTTCGATTCAATGTATAA

Protein sequence

>Msa1284880

MATKLVPSLVHPLKSRFFGNTLLTKQSFHLYGVQPKLSYSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVGVPDSRLQVLSDLSKSQRMVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTDLDQEEAEKSALEKIRVALLDGKPARSVTLTDFERESVKQLCLLTMKPIIYVANVAESDLADASNNDYVTGVKNVASELQSGIVTISAQLPSIDKEGDDDDDEVEENEDEYDDELDEFPPDMGMNDQLLTFLLSSPQRIKRQRHGQYLQVAYNDFVAAGSLGAAREKGLLRSEGKDYIVQEGDVMLFRFNV*