AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1295340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295340 MtrunA17_Chr4g0062611 79.562 411 56 7 24 410 49 455 0.0 584
Msa1295340 MtrunA17_Chr8g0372751 81.385 231 26 3 211 424 14 244 2.32e-118 345
Msa1295340 MtrunA17_Chr8g0372771 82.308 130 22 1 14 142 38 167 3.69e-59 190
Msa1295340 MtrunA17_Chr8g0372761 92.188 64 4 1 143 206 16 78 3.89e-34 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295340 AT1G03280.3 52.885 416 146 15 24 406 60 458 1.99e-122 364
Msa1295340 AT1G03280.2 52.885 416 146 15 24 406 60 458 1.99e-122 364
Msa1295340 AT1G03280.1 52.885 416 146 15 24 406 60 458 1.99e-122 364
Msa1295340 AT4G20340.3 49.015 406 172 10 24 406 5 398 1.20e-103 314
Msa1295340 AT4G20340.2 49.015 406 172 10 24 406 60 453 3.86e-103 315
Msa1295340 AT4G20340.1 49.015 406 172 10 24 406 60 453 3.86e-103 315
Msa1295340 AT4G20810.1 45.476 420 163 16 24 423 42 415 7.61e-98 299

Find 90 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATCACTTCTTCCAGTTT+TGG 0.162141 8_3:-53477216 None:intergenic
GACTTGCCTGTTCCAAAATT+TGG 0.170144 8_3:+53481193 Msa1295340:CDS
AACTGACAGTACATCTTTAA+AGG 0.175603 8_3:+53482622 Msa1295340:CDS
GCTTGAAGACTGCCAAATTT+TGG 0.179091 8_3:-53481205 None:intergenic
CGACCGATTTGGTCTATTAG+AGG 0.304159 8_3:-53481163 None:intergenic
GAAGCTCGGGCTAGTGCAGC+TGG 0.317114 8_3:+53481232 Msa1295340:CDS
ATCTGCTGTGTTCACATCTT+GGG 0.327954 8_3:-53483015 None:intergenic
CATCTGCTGTGTTCACATCT+TGG 0.328566 8_3:-53483016 None:intergenic
TAATGCTGGTGATTCTAATC+TGG 0.336277 8_3:+53481273 Msa1295340:CDS
GCATAAGTTGAAAGATGAAT+TGG 0.349219 8_3:+53479278 Msa1295340:CDS
GAAGATAATCAGCCCAAAAC+TGG 0.349455 8_3:+53477203 Msa1295340:CDS
GGGCTGATTATCTTCTTTAC+CGG 0.354315 8_3:-53477195 None:intergenic
ACGGCGGCGCGAAAAGTTAA+AGG 0.358209 8_3:+53479599 Msa1295340:CDS
GATTCTAATCTGGGATATAA+TGG 0.362821 8_3:+53481283 Msa1295340:CDS
TGGGAAGAGGCTCCTGTTAG+AGG 0.376308 8_3:+53483113 Msa1295340:CDS
TCATCTTCATTGTCTTCTGC+TGG 0.387140 8_3:-53485386 None:intergenic
ACTTAAGAAGCAACACGAAT+TGG 0.389424 8_3:+53482974 Msa1295340:CDS
GTCTTCAAGCATGGGAAGCT+CGG 0.396973 8_3:+53481218 Msa1295340:CDS
TATGTACAAATTGTGGAAAA+AGG 0.405813 8_3:+53479328 Msa1295340:CDS
GAATAAAATGTACCTCTAAC+AGG 0.409316 8_3:-53483125 None:intergenic
GCAGCTGGGCGTGCAGCTAA+TGG 0.419366 8_3:+53481247 Msa1295340:CDS
AGTCTTCTACCCGACCGATT+TGG 0.429028 8_3:-53481174 None:intergenic
GTTGCTTTGTATGCAATTTG+AGG 0.441479 8_3:-53478154 None:intergenic
TGCAGATATATAAAGGGGTT+AGG 0.445590 8_3:+53479235 Msa1295340:intron
TTCCATTGTGAATGTTGTAA+TGG 0.457370 8_3:+53479507 Msa1295340:CDS
TTTATAGGATGAGTATATCA+AGG 0.460980 8_3:+53482935 Msa1295340:intron
CGATTGGAAGTACTGCTAGA+AGG 0.461514 8_3:-53483041 None:intergenic
TAAAGGAAATGGAGGTTACA+AGG 0.463278 8_3:+53485337 Msa1295340:intron
AGGAAAAGATGGAGAAGAAA+AGG 0.464213 8_3:+53479003 Msa1295340:CDS
ATTGTCTTCTGCTGGAGCAT+CGG 0.466214 8_3:-53485378 None:intergenic
ACAGCGCGGAGAGGTGAAGC+AGG 0.479424 8_3:+53482691 Msa1295340:CDS
AGATTATCACTAGAGTTCAT+AGG 0.486428 8_3:+53478210 Msa1295340:CDS
ACCTTGGTATCTCCGCTGTA+TGG 0.489229 8_3:-53481316 None:intergenic
AAAGGACATGCTTCAAAAGA+TGG 0.489353 8_3:+53479617 Msa1295340:CDS
CCTCCATGGATGATTACATC+AGG 0.493168 8_3:+53482650 Msa1295340:CDS
AATGCTGGTGATTCTAATCT+GGG 0.496431 8_3:+53481274 Msa1295340:CDS
GAATATATATGTACAAATTG+TGG 0.502239 8_3:+53479321 Msa1295340:CDS
TTTCATGCCAACTTGGCGAT+TGG 0.507113 8_3:-53483057 None:intergenic
TCTTCAAGCATGGGAAGCTC+GGG 0.510368 8_3:+53481219 Msa1295340:CDS
ACAATGAAGATGATGTCGAC+TGG 0.524851 8_3:+53485396 Msa1295340:CDS
GCTTTCTATGATGATTATAC+CGG 0.526519 8_3:+53477176 Msa1295340:exon
CAGGTGGTGGTTGACTTCAA+TGG 0.533139 8_3:+53482566 Msa1295340:intron
CACTAGAGTTCATAGGAAAG+AGG 0.545956 8_3:+53478217 Msa1295340:CDS
AGTACTTCCAATCGCCAAGT+TGG 0.547271 8_3:+53483050 Msa1295340:CDS
AATTTGGCAGTCTTCAAGCA+TGG 0.551091 8_3:+53481209 Msa1295340:CDS
AAGCCTCTAATAGACCAAAT+CGG 0.551332 8_3:+53481160 Msa1295340:CDS
ATACCTGATGTAATCATCCA+TGG 0.551552 8_3:-53482653 None:intergenic
ATTTGGCAGTCTTCAAGCAT+GGG 0.552152 8_3:+53481210 Msa1295340:CDS
CTCTAATAGACCAAATCGGT+CGG 0.554167 8_3:+53481164 Msa1295340:CDS
GATGCTACGAAAGGAAAAGA+TGG 0.554983 8_3:+53478992 Msa1295340:CDS
AAGCTCGGGCTAGTGCAGCT+GGG 0.559290 8_3:+53481233 Msa1295340:CDS
GATGATGTCGACTGGGAAGA+AGG 0.566390 8_3:+53485404 Msa1295340:CDS
CAATGAAGATGATGTCGACT+GGG 0.567076 8_3:+53485397 Msa1295340:CDS
TCTAATAGACCAAATCGGTC+GGG 0.571691 8_3:+53481165 Msa1295340:CDS
GCTGCTCAAGAAGGTGGAGA+TGG 0.572571 8_3:+53479558 Msa1295340:CDS
AAGTTAGCTGCTCAAGAAGG+TGG 0.576893 8_3:+53479552 Msa1295340:CDS
ATCAGCTGTAGCAGCTACAG+CGG 0.579271 8_3:-53478972 None:intergenic
AAACGCAAGGAAGATGATGA+TGG 0.583208 8_3:+53483083 Msa1295340:CDS
TCTGCTGTGTTCACATCTTG+GGG 0.584121 8_3:-53483014 None:intergenic
GTATCTCCGCTGTATGGCAG+TGG 0.587254 8_3:-53481310 None:intergenic
TGTACATATATATTCTCGAA+CGG 0.588463 8_3:-53479313 None:intergenic
GTGTTGCTTCTTAAGTAAAG+CGG 0.592790 8_3:-53482967 None:intergenic
GTCTGTGTATTGAGCTGCTG+TGG 0.592950 8_3:-53482741 None:intergenic
GAAAAGTTAGCTGCTCAAGA+AGG 0.594454 8_3:+53479549 Msa1295340:CDS
GTTGACTTCAATGGTACTGA+AGG 0.595897 8_3:+53482575 Msa1295340:CDS
ATGGATTAGAGAAGAAGACT+TGG 0.600807 8_3:+53478124 Msa1295340:CDS
GGTACTGAAGGCAAAGGAGA+GGG 0.602003 8_3:+53482587 Msa1295340:CDS
CTGTTGTCTAGATTATGCAC+AGG 0.608523 8_3:+53479048 Msa1295340:CDS
TGGCATGAAATCAAAACGCA+AGG 0.615437 8_3:+53483070 Msa1295340:CDS
GCAGCTAATGGAGATAATGC+TGG 0.617199 8_3:+53481259 Msa1295340:CDS
GAGATGAGAATGCAAGAAGA+CGG 0.619322 8_3:+53479580 Msa1295340:CDS
AGATGATGATGGTACTGAGT+GGG 0.622629 8_3:+53483094 Msa1295340:CDS
TAGAGAAGAAGACTTGGCAA+AGG 0.625307 8_3:+53478130 Msa1295340:CDS
TGATGGTACTGAGTGGGAAG+AGG 0.628964 8_3:+53483100 Msa1295340:CDS
AGGAAATGGAGGTTACAAGG+TGG 0.630329 8_3:+53485340 Msa1295340:intron
GCCATACAGCGGAGATACCA+AGG 0.630579 8_3:+53481315 Msa1295340:CDS
TTCAATGGTACTGAAGGCAA+AGG 0.631073 8_3:+53482581 Msa1295340:CDS
TTCCATTACAACATTCACAA+TGG 0.633215 8_3:-53479509 None:intergenic
TGGTACTGAAGGCAAAGGAG+AGG 0.643856 8_3:+53482586 Msa1295340:CDS
GCTACAGCTGATGCTACGAA+AGG 0.657325 8_3:+53478983 Msa1295340:CDS
GGACATGCTTCAAAAGATGG+AGG 0.658761 8_3:+53479620 Msa1295340:CDS
TACGAAGGAACAGCGCGGAG+AGG 0.662953 8_3:+53482682 Msa1295340:intron
ATGAGAATGCAAGAAGACGG+CGG 0.703092 8_3:+53479583 Msa1295340:CDS
GGAGCACCACTGCCATACAG+CGG 0.717941 8_3:+53481304 Msa1295340:CDS
ACTGGAAGAAGTGATAACAG+AGG 0.728511 8_3:+53477221 Msa1295340:CDS
ATGTTGTAATGGAAAACTAG+AGG 0.731298 8_3:+53479518 Msa1295340:CDS
CCTGATGTAATCATCCATGG+AGG 0.742710 8_3:-53482650 None:intergenic
ACAACGCTTTGGATGCACTG+CGG 0.757151 8_3:+53479457 Msa1295340:CDS
AAGATGATGATGGTACTGAG+TGG 0.777201 8_3:+53483093 Msa1295340:CDS
AATCTTACGAAGGAACAGCG+CGG 0.828033 8_3:+53482677 Msa1295340:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTGATAGTAT+TGG + chr8_3:53478073-53478092 Msa1295340:intron 10.0%
!! AAATGTTTGATATTATAAAA+AGG + chr8_3:53479925-53479944 Msa1295340:intron 10.0%
!! AATTAAAATTAAATATATGC+TGG - chr8_3:53480457-53480476 None:intergenic 10.0%
!! TCAAATAATTTAGTAATTAT+AGG + chr8_3:53483827-53483846 Msa1295340:intron 10.0%
!!! AATTATTTTTTATTTTTGCA+AGG - chr8_3:53483902-53483921 None:intergenic 10.0%
!! AATAATGCAAAAGTAATATA+AGG + chr8_3:53477989-53478008 Msa1295340:intron 15.0%
!!! ATTTATTTAATTTGGAACTT+TGG + chr8_3:53478048-53478067 Msa1295340:intron 15.0%
!! ATAGTATTCTAGATATTTAA+TGG + chr8_3:53478808-53478827 Msa1295340:intron 15.0%
!! ATAAAACAACTAAATATCAT+TGG - chr8_3:53479114-53479133 None:intergenic 15.0%
!!! ATTTTTTTGCAGATATATAA+AGG + chr8_3:53479228-53479247 Msa1295340:intron 15.0%
!!! TTTTTTTGCAGATATATAAA+GGG + chr8_3:53479229-53479248 Msa1295340:intron 15.0%
!! TGATATTATAAAAAGGAAAA+TGG + chr8_3:53479932-53479951 Msa1295340:intron 15.0%
!! AGAATATTAAAATGAAAACA+AGG - chr8_3:53480261-53480280 None:intergenic 15.0%
!!! AGTTTTTTTTTTTCAATTGT+GGG - chr8_3:53480587-53480606 None:intergenic 15.0%
!!! AAGTTTTTTTTTTTCAATTG+TGG - chr8_3:53480588-53480607 None:intergenic 15.0%
!!! TAATGTAATCAAATTTTGTT+GGG + chr8_3:53480911-53480930 Msa1295340:intron 15.0%
!! AAAAAGATAAAATGTTAGAA+AGG + chr8_3:53481409-53481428 Msa1295340:intron 15.0%
!! AAAAGATAAAATGTTAGAAA+GGG + chr8_3:53481410-53481429 Msa1295340:intron 15.0%
!! TAATATATCATTCAAAACTA+GGG - chr8_3:53481674-53481693 None:intergenic 15.0%
!! ATAATATATCATTCAAAACT+AGG - chr8_3:53481675-53481694 None:intergenic 15.0%
!! TAATATATAGAAATAATTCC+TGG - chr8_3:53482171-53482190 None:intergenic 15.0%
!!! ATTATTTCTATATATTAGAG+AGG + chr8_3:53482174-53482193 Msa1295340:intron 15.0%
!!! TTATTTCTATATATTAGAGA+GGG + chr8_3:53482175-53482194 Msa1295340:intron 15.0%
!!! AGTATAATTTGTAGTTTATT+TGG + chr8_3:53482382-53482401 Msa1295340:intron 15.0%
!!! TTAACATTTCAATATTTTCA+AGG - chr8_3:53482524-53482543 None:intergenic 15.0%
!! AAGTAATCTATAAATAAATG+TGG + chr8_3:53482542-53482561 Msa1295340:intron 15.0%
!! AAAAACTAATTGAACATTAA+AGG - chr8_3:53483767-53483786 None:intergenic 15.0%
!! AATATATTATGATATGTATC+CGG - chr8_3:53484150-53484169 None:intergenic 15.0%
!!! AATAATTCATATTTTAGTTG+AGG - chr8_3:53484906-53484925 None:intergenic 15.0%
!!! ATTTTGAAATATTTCACAAA+AGG - chr8_3:53484935-53484954 None:intergenic 15.0%
!! GAATTTAATATAATAACTTC+TGG + chr8_3:53485074-53485093 Msa1295340:intron 15.0%
!! GCAGGTTTATTTATTTAATT+TGG + chr8_3:53478040-53478059 Msa1295340:intron 20.0%
!! GTCAAACAAAACAAAAAAAA+GGG - chr8_3:53478672-53478691 None:intergenic 20.0%
!! TGTCAAACAAAACAAAAAAA+AGG - chr8_3:53478673-53478692 None:intergenic 20.0%
!!! TTTTTTGCAGATATATAAAG+GGG + chr8_3:53479230-53479249 Msa1295340:intron 20.0%
!! GAATATATATGTACAAATTG+TGG + chr8_3:53479321-53479340 Msa1295340:CDS 20.0%
!! ATTAAAATTCCCAAGTATTA+TGG - chr8_3:53479427-53479446 None:intergenic 20.0%
!!! ATGTTTGTTATCATGTTTTT+GGG + chr8_3:53479787-53479806 Msa1295340:intron 20.0%
!! TCTCTAATTATATAACTTCT+TGG - chr8_3:53479888-53479907 None:intergenic 20.0%
!! AAATTCTGTTATAAAGTTGT+GGG - chr8_3:53480075-53480094 None:intergenic 20.0%
!! AATATCAAACTAATTGGATT+TGG - chr8_3:53480354-53480373 None:intergenic 20.0%
!! AGTTAGAATATCAAACTAAT+TGG - chr8_3:53480360-53480379 None:intergenic 20.0%
!! ATTTCAATTTCATCTTTATG+AGG - chr8_3:53480636-53480655 None:intergenic 20.0%
!!! GTAATGTAATCAAATTTTGT+TGG + chr8_3:53480910-53480929 Msa1295340:intron 20.0%
!!! AATGTAATCAAATTTTGTTG+GGG + chr8_3:53480912-53480931 Msa1295340:intron 20.0%
!! CAATTTATCATGAAAATAAG+AGG - chr8_3:53481035-53481054 None:intergenic 20.0%
!! AATATATCATTCAAAACTAG+GGG - chr8_3:53481673-53481692 None:intergenic 20.0%
!!! ACTCAATTTTTGTTTTAGTT+TGG + chr8_3:53481746-53481765 Msa1295340:intron 20.0%
!!! TATTTCTATATATTAGAGAG+GGG + chr8_3:53482176-53482195 Msa1295340:intron 20.0%
!! CTAAAATTATAAGCTATACA+TGG - chr8_3:53482486-53482505 None:intergenic 20.0%
!! TGTCTTATACTTTCTTAAAT+GGG - chr8_3:53483258-53483277 None:intergenic 20.0%
!! TTGTCTTATACTTTCTTAAA+TGG - chr8_3:53483259-53483278 None:intergenic 20.0%
!! GGTTTGATTATATTATTGTT+TGG + chr8_3:53483304-53483323 Msa1295340:intron 20.0%
!! AATAACTAAGAATGAATGAT+AGG + chr8_3:53483445-53483464 Msa1295340:intron 20.0%
!!! TTTTTACCTGTTAAGATTTT+TGG - chr8_3:53483611-53483630 None:intergenic 20.0%
!! TTGAAATTTAAGAAACGATA+CGG - chr8_3:53484292-53484311 None:intergenic 20.0%
!! ATTTAGTATCTGTAAGAAAT+TGG + chr8_3:53484608-53484627 Msa1295340:intron 20.0%
!! TTTAGTATCTGTAAGAAATT+GGG + chr8_3:53484609-53484628 Msa1295340:intron 20.0%
!!! ATTGATTTTCATTACCTATT+TGG + chr8_3:53484877-53484896 Msa1295340:intron 20.0%
!! GTTATTATATTAAATTCGTG+AGG - chr8_3:53485071-53485090 None:intergenic 20.0%
! TAAACTTGATAAATTGAACC+TGG - chr8_3:53477276-53477295 None:intergenic 25.0%
! TTTAACGTACCTACATATAT+AGG + chr8_3:53477355-53477374 Msa1295340:intron 25.0%
! CTATCTTCTTAAATTACTAC+CGG + chr8_3:53477583-53477602 Msa1295340:intron 25.0%
! TGGTATAGATATAATTTAGC+CGG + chr8_3:53477657-53477676 Msa1295340:intron 25.0%
! TCATTGTCTTAAATTACTAC+CGG - chr8_3:53477679-53477698 None:intergenic 25.0%
! GCGTTTATTCAAAATTACAA+AGG + chr8_3:53477851-53477870 Msa1295340:intron 25.0%
! CAAAGGAAAAAAACAAAGAT+TGG + chr8_3:53477868-53477887 Msa1295340:intron 25.0%
!! AATTTTATACCAGGAAACAA+TGG + chr8_3:53478105-53478124 Msa1295340:intron 25.0%
!!! ATATTGATTTGATTGGCTAA+TGG - chr8_3:53478312-53478331 None:intergenic 25.0%
!!! ACAGAACATATTGATTTGAT+TGG - chr8_3:53478319-53478338 None:intergenic 25.0%
!! AAAAAAAAGGGTGTGTATAT+GGG - chr8_3:53478660-53478679 None:intergenic 25.0%
! CAGTTGAAGAATATAATTTG+TGG - chr8_3:53479083-53479102 None:intergenic 25.0%
! TGTACATATATATTCTCGAA+CGG - chr8_3:53479316-53479335 None:intergenic 25.0%
! TATGTACAAATTGTGGAAAA+AGG + chr8_3:53479328-53479347 Msa1295340:CDS 25.0%
!! TATTTCTGTTCCATAATACT+TGG + chr8_3:53479414-53479433 Msa1295340:intron 25.0%
! ATTTCTGTTCCATAATACTT+GGG + chr8_3:53479415-53479434 Msa1295340:intron 25.0%
!!! TTATTTTAGATACAACGCTT+TGG + chr8_3:53479446-53479465 Msa1295340:intron 25.0%
!!! GATGTTTGTTATCATGTTTT+TGG + chr8_3:53479786-53479805 Msa1295340:intron 25.0%
!!! TGTTTGTTATCATGTTTTTG+GGG + chr8_3:53479788-53479807 Msa1295340:intron 25.0%
!! AGCTTGTTTAACTAAATACA+AGG - chr8_3:53479819-53479838 None:intergenic 25.0%
! ATTTAGTTAAACAAGCTATG+AGG + chr8_3:53479822-53479841 Msa1295340:intron 25.0%
! TTTAGTTAAACAAGCTATGA+GGG + chr8_3:53479823-53479842 Msa1295340:intron 25.0%
! CAAATTCTGTTATAAAGTTG+TGG - chr8_3:53480076-53480095 None:intergenic 25.0%
!!! AAATTCATACGGTTTTGATA+GGG - chr8_3:53480220-53480239 None:intergenic 25.0%
!!! TAAATTCATACGGTTTTGAT+AGG - chr8_3:53480221-53480240 None:intergenic 25.0%
! ATACGTGTGATAAATTCATA+CGG - chr8_3:53480231-53480250 None:intergenic 25.0%
!! AATATTCTAAAGACATCAAG+TGG + chr8_3:53480273-53480292 Msa1295340:intron 25.0%
!! TCTAGGTATTTTTCACATTT+TGG - chr8_3:53480564-53480583 None:intergenic 25.0%
!! TTTAAAACAAACATGACTGA+AGG + chr8_3:53480997-53481016 Msa1295340:intron 25.0%
! ATAACATGCAAATCAAATTG+CGG - chr8_3:53481103-53481122 None:intergenic 25.0%
!!! GTAACATTATGCTGTTTTAA+AGG + chr8_3:53481337-53481356 Msa1295340:intron 25.0%
! GAGTATTAGGTATCAAAAAT+TGG + chr8_3:53481381-53481400 Msa1295340:intron 25.0%
! ATGAGAAAAAGAACATAGTA+TGG - chr8_3:53481632-53481651 None:intergenic 25.0%
!! CTTTTTCTCATCAATTTTCT+TGG + chr8_3:53481641-53481660 Msa1295340:intron 25.0%
! ACTTTCAGTACTAACTTAAA+GGG - chr8_3:53481820-53481839 None:intergenic 25.0%
! AACTTTCAGTACTAACTTAA+AGG - chr8_3:53481821-53481840 None:intergenic 25.0%
! TATAGCAGACATTAATTAGA+AGG + chr8_3:53481900-53481919 Msa1295340:intron 25.0%
! ATAGCAGACATTAATTAGAA+GGG + chr8_3:53481901-53481920 Msa1295340:intron 25.0%
!! TCTTCTTAGCAATAATTTGT+TGG + chr8_3:53482262-53482281 Msa1295340:intron 25.0%
!!! CTTCTTAGCAATAATTTGTT+GGG + chr8_3:53482263-53482282 Msa1295340:intron 25.0%
!!! TTCTTAGCAATAATTTGTTG+GGG + chr8_3:53482264-53482283 Msa1295340:intron 25.0%
!! TTTTCACCATTAATATCATC+TGG + chr8_3:53482332-53482351 Msa1295340:intron 25.0%
!!! TCTGGTAATGGAATTTATTA+CGG + chr8_3:53482350-53482369 Msa1295340:intron 25.0%
!!! CAATATTTTCAAGGAAGAAA+TGG - chr8_3:53482515-53482534 None:intergenic 25.0%
! ATCTATAAATAAATGTGGAC+AGG + chr8_3:53482547-53482566 Msa1295340:intron 25.0%
! GCATGATGATAAAAATATAC+AGG + chr8_3:53482784-53482803 Msa1295340:intron 25.0%
!! GGATTTATGTTACCTTTTAT+AGG + chr8_3:53482920-53482939 Msa1295340:intron 25.0%
! TGATATACTCATCCTATAAA+AGG - chr8_3:53482935-53482954 None:intergenic 25.0%
! TTTATAGGATGAGTATATCA+AGG + chr8_3:53482935-53482954 Msa1295340:intron 25.0%
! AATCTGATTACACTGAAATT+TGG + chr8_3:53483153-53483172 Msa1295340:intron 25.0%
! TTAAACATGTATGCAACAAT+TGG - chr8_3:53483220-53483239 None:intergenic 25.0%
!!! GTAATAATAAAGCTCTAAAG+TGG - chr8_3:53483394-53483413 None:intergenic 25.0%
! ACAATGCATAATATATGCAA+GGG + chr8_3:53483524-53483543 Msa1295340:intron 25.0%
!!! GGTAAAAAGTGTCATTAAAT+AGG + chr8_3:53483623-53483642 Msa1295340:intron 25.0%
! GAATAATCTCTAATTTCTGA+AGG + chr8_3:53483648-53483667 Msa1295340:intron 25.0%
! ATCTCATCTCTTAAAGAAAT+TGG - chr8_3:53483741-53483760 None:intergenic 25.0%
! AATAATTTACAATGGTAGCT+TGG + chr8_3:53483915-53483934 Msa1295340:intron 25.0%
! TAAAAAAAAACGCTACTTCT+AGG - chr8_3:53484255-53484274 None:intergenic 25.0%
! TAAATTTATCGCTCAGAAAA+TGG + chr8_3:53484442-53484461 Msa1295340:intron 25.0%
! AAATTTATCGCTCAGAAAAT+GGG + chr8_3:53484443-53484462 Msa1295340:intron 25.0%
!!! CTATGAAATTCTTTTGGAAT+TGG - chr8_3:53484960-53484979 None:intergenic 25.0%
! CAATTCCAAAAGAATTTCAT+AGG + chr8_3:53484958-53484977 Msa1295340:intron 25.0%
! TTTAAGAAAATGTCGTATAG+AGG + chr8_3:53484991-53485010 Msa1295340:intron 25.0%
! TTAAGAAAATGTCGTATAGA+GGG + chr8_3:53484992-53485011 Msa1295340:intron 25.0%
!!! TCGTTTTAATTCCAAAAATC+AGG + chr8_3:53485017-53485036 Msa1295340:intron 25.0%
!!! CGTTTTAATTCCAAAAATCA+GGG + chr8_3:53485018-53485037 Msa1295340:intron 25.0%
!!! GTTTTAATTCCAAAAATCAG+GGG + chr8_3:53485019-53485038 Msa1295340:intron 25.0%
!!! TTTTAATTCCAAAAATCAGG+GGG + chr8_3:53485020-53485039 Msa1295340:intron 25.0%
! TACTCTATTATTCTATCCTT+TGG + chr8_3:53485266-53485285 Msa1295340:intron 25.0%
! CAAATAACATTATCAACCAA+AGG - chr8_3:53485285-53485304 None:intergenic 25.0%
!! GATCTTAGTGTAACTTTTAA+AGG + chr8_3:53485320-53485339 Msa1295340:intron 25.0%
!!! AGTGTAACTTTTAAAGGAAA+TGG + chr8_3:53485326-53485345 Msa1295340:intron 25.0%
GCTTTCTATGATGATTATAC+CGG + chr8_3:53477176-53477195 Msa1295340:exon 30.0%
! TTATCACTTCTTCCAGTTTT+GGG - chr8_3:53477218-53477237 None:intergenic 30.0%
TTAATCACAATGTACCTATG+AGG + chr8_3:53477293-53477312 Msa1295340:intron 30.0%
TCTTAAACACTTCTGATCAA+AGG + chr8_3:53477497-53477516 Msa1295340:intron 30.0%
TATATCTATACTACGAAGCA+TGG - chr8_3:53477776-53477795 None:intergenic 30.0%
TTCCTGCAATTGTAGATTAT+TGG + chr8_3:53477799-53477818 Msa1295340:intron 30.0%
CTGTGTATTTGAATAATAGC+AGG + chr8_3:53478022-53478041 Msa1295340:intron 30.0%
! TCTGCTGTTAATTTTATACC+AGG + chr8_3:53478096-53478115 Msa1295340:intron 30.0%
AGATTATCACTAGAGTTCAT+AGG + chr8_3:53478210-53478229 Msa1295340:CDS 30.0%
! TGTCATTTGTGAATTACACT+TGG + chr8_3:53478279-53478298 Msa1295340:intron 30.0%
TACAGCTTAACAAAGATGTA+TGG + chr8_3:53478373-53478392 Msa1295340:intron 30.0%
!! ACTAGAAGCTTTGAAATCAA+AGG + chr8_3:53478465-53478484 Msa1295340:intron 30.0%
ACATAATTCAGTGTACTCAT+AGG + chr8_3:53478561-53478580 Msa1295340:intron 30.0%
! CAAAAAAAAGGGTGTGTATA+TGG - chr8_3:53478661-53478680 None:intergenic 30.0%
ATTACTTTCACAATGCACAA+GGG - chr8_3:53478772-53478791 None:intergenic 30.0%
AATTACTTTCACAATGCACA+AGG - chr8_3:53478773-53478792 None:intergenic 30.0%
TGAATATATTTAGTCGCGTA+TGG + chr8_3:53478883-53478902 Msa1295340:intron 30.0%
!! TTGTTTTATTGCAGAGAGAA+GGG + chr8_3:53479125-53479144 Msa1295340:intron 30.0%
CAAACGAATTGTCTGAAAAT+CGG - chr8_3:53479170-53479189 None:intergenic 30.0%
TTCAGACAATTCGTTTGAAT+CGG + chr8_3:53479173-53479192 Msa1295340:intron 30.0%
! GCATAAGTTGAAAGATGAAT+TGG + chr8_3:53479278-53479297 Msa1295340:CDS 30.0%
TTCCATTGTGAATGTTGTAA+TGG + chr8_3:53479507-53479526 Msa1295340:CDS 30.0%
TTCCATTACAACATTCACAA+TGG - chr8_3:53479512-53479531 None:intergenic 30.0%
! ATGTTGTAATGGAAAACTAG+AGG + chr8_3:53479518-53479537 Msa1295340:CDS 30.0%
!! GAACCATTTGTTTCTATTTG+TGG + chr8_3:53479656-53479675 Msa1295340:intron 30.0%
AAGCCACAAATAGAAACAAA+TGG - chr8_3:53479662-53479681 None:intergenic 30.0%
TGCTATAAACTACTTTGAGT+AGG - chr8_3:53479763-53479782 None:intergenic 30.0%
!! TATATAACTTCTTGGTGTTG+AGG - chr8_3:53479880-53479899 None:intergenic 30.0%
CAAAGAATTATATCTCTCTG+TGG - chr8_3:53480006-53480025 None:intergenic 30.0%
! AGAAGTGAATTTTCTGTTGT+AGG - chr8_3:53480029-53480048 None:intergenic 30.0%
TGAATTTATCACACGTATAG+AGG + chr8_3:53480233-53480252 Msa1295340:intron 30.0%
ACATCAAGTGGTAATTGTTT+AGG + chr8_3:53480285-53480304 Msa1295340:intron 30.0%
! GTGGTAATTGTTTAGGATAA+TGG + chr8_3:53480292-53480311 Msa1295340:intron 30.0%
CATGCATATTTGATACTCTA+GGG - chr8_3:53480412-53480431 None:intergenic 30.0%
!!! TTTTTTTCAATTGTGGGTCT+AGG - chr8_3:53480581-53480600 None:intergenic 30.0%
! TCAACTTTTCTGTATCATCT+TGG - chr8_3:53480723-53480742 None:intergenic 30.0%
GATACAGAAAAGTTGAAACA+TGG + chr8_3:53480727-53480746 Msa1295340:intron 30.0%
ACTTGAGGTCAACAATATTA+TGG + chr8_3:53480823-53480842 Msa1295340:intron 30.0%
CTTGAGGTCAACAATATTAT+GGG + chr8_3:53480824-53480843 Msa1295340:intron 30.0%
TCAGTAGAACTGTAAACTTT+GGG + chr8_3:53480942-53480961 Msa1295340:intron 30.0%
ACAGAAGCTACAAAAAGTAA+AGG - chr8_3:53481079-53481098 None:intergenic 30.0%
TAACATGCAAATCAAATTGC+GGG - chr8_3:53481102-53481121 None:intergenic 30.0%
! GATTCTAATCTGGGATATAA+TGG + chr8_3:53481283-53481302 Msa1295340:CDS 30.0%
AAAACAGCATAATGTTACCT+TGG - chr8_3:53481335-53481354 None:intergenic 30.0%
ATATGTACCAGAAACTTCAA+AGG - chr8_3:53481504-53481523 None:intergenic 30.0%
! AATGCTAATTTTCCTTTCCA+CGG + chr8_3:53481843-53481862 Msa1295340:intron 30.0%
TTAATGTCTGCTATAAGAGA+GGG - chr8_3:53481895-53481914 None:intergenic 30.0%
ATTAATGTCTGCTATAAGAG+AGG - chr8_3:53481896-53481915 None:intergenic 30.0%
TAGCAGACATTAATTAGAAG+GGG + chr8_3:53481902-53481921 Msa1295340:intron 30.0%
! TGTCTCATCTTTTTCTTCAT+AGG - chr8_3:53481949-53481968 None:intergenic 30.0%
! TGTTAAATTTTCACATGGCA+AGG - chr8_3:53481988-53482007 None:intergenic 30.0%
! TCTCGTGTTAAATTTTCACA+TGG - chr8_3:53481993-53482012 None:intergenic 30.0%
! AATGTGAGTTGGATAAGAAT+TGG + chr8_3:53482201-53482220 Msa1295340:intron 30.0%
! ATGTGAGTTGGATAAGAATT+GGG + chr8_3:53482202-53482221 Msa1295340:intron 30.0%
!! AATAATTTGTTGGGGTACAT+TGG + chr8_3:53482272-53482291 Msa1295340:intron 30.0%
! GTACATTGGTATACTGTTTT+AGG + chr8_3:53482286-53482305 Msa1295340:intron 30.0%
AAGTAAAACAATAGAGCAGT+AGG - chr8_3:53482314-53482333 None:intergenic 30.0%
CCATTACCAGATGATATTAA+TGG - chr8_3:53482341-53482360 None:intergenic 30.0%
CCATTAATATCATCTGGTAA+TGG + chr8_3:53482338-53482357 Msa1295340:intron 30.0%
!! TATTTTCAAGGAAGAAATGG+TGG - chr8_3:53482512-53482531 None:intergenic 30.0%
TATAAATAAATGTGGACAGG+TGG + chr8_3:53482550-53482569 Msa1295340:intron 30.0%
AACTGACAGTACATCTTTAA+AGG + chr8_3:53482622-53482641 Msa1295340:CDS 30.0%
! CAAGAAAGTTTTTGATCACT+AGG + chr8_3:53482899-53482918 Msa1295340:intron 30.0%
GAATAAAATGTACCTCTAAC+AGG - chr8_3:53483128-53483147 None:intergenic 30.0%
CTTATACTTTCTTAAATGGG+AGG - chr8_3:53483255-53483274 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr8_3:53483523-53483542 Msa1295340:intron 30.0%
ACTTGACCAAAAATCTTAAC+AGG + chr8_3:53483602-53483621 Msa1295340:intron 30.0%
TTGTCATTCTTTAGTTGGTT+CGG + chr8_3:53483991-53484010 Msa1295340:intron 30.0%
!!! TCTTCAATTTTAGAGTATCC+AGG - chr8_3:53484090-53484109 None:intergenic 30.0%
! AACAACATCATTTTATCCCA+TGG - chr8_3:53484397-53484416 None:intergenic 30.0%
ATGGGATAAAATGATGTTGT+TGG + chr8_3:53484396-53484415 Msa1295340:intron 30.0%
TTTAGTTGAGGATTCCAAAT+AGG - chr8_3:53484894-53484913 None:intergenic 30.0%
TTCCAAAAGAATTTCATAGG+AGG + chr8_3:53484961-53484980 Msa1295340:intron 30.0%
TTTAATTCCAAAAATCAGGG+GGG + chr8_3:53485021-53485040 Msa1295340:intron 30.0%
TATATTAAATTCGTGAGGCT+GGG - chr8_3:53485066-53485085 None:intergenic 30.0%
TTATATTAAATTCGTGAGGC+TGG - chr8_3:53485067-53485086 None:intergenic 30.0%
ATTGTCAACATCTTAACACA+TGG - chr8_3:53485137-53485156 None:intergenic 30.0%
TACACTAAGATCAGTAATGA+TGG - chr8_3:53485312-53485331 None:intergenic 30.0%
!! GTAACTTTTAAAGGAAATGG+AGG + chr8_3:53485329-53485348 Msa1295340:intron 30.0%
! GTTATCACTTCTTCCAGTTT+TGG - chr8_3:53477219-53477238 None:intergenic 35.0%
TGATAAATTGAACCTGGTGA+GGG - chr8_3:53477270-53477289 None:intergenic 35.0%
TTGATAAATTGAACCTGGTG+AGG - chr8_3:53477271-53477290 None:intergenic 35.0%
ATTTGCCAGTGTGTCAAATA+TGG - chr8_3:53477544-53477563 None:intergenic 35.0%
CACCAATAATCTACAATTGC+AGG - chr8_3:53477804-53477823 None:intergenic 35.0%
AAAGAAAGCGAAAATAGCCA+CGG + chr8_3:53477936-53477955 Msa1295340:intron 35.0%
! GGAATATTTTGTAAGTGGCA+GGG + chr8_3:53477957-53477976 Msa1295340:intron 35.0%
TTCTCTAATCCATTGTTTCC+TGG - chr8_3:53478117-53478136 None:intergenic 35.0%
!! ATGGATTAGAGAAGAAGACT+TGG + chr8_3:53478124-53478143 Msa1295340:CDS 35.0%
! GTTGCTTTGTATGCAATTTG+AGG - chr8_3:53478157-53478176 None:intergenic 35.0%
TTTCAAAGCTTCTAGTCACA+AGG - chr8_3:53478461-53478480 None:intergenic 35.0%
! TGATTTTCACAGACAGCAAA+AGG + chr8_3:53478932-53478951 Msa1295340:intron 35.0%
AGGAAAAGATGGAGAAGAAA+AGG + chr8_3:53479003-53479022 Msa1295340:CDS 35.0%
!! GTTGTTTTATTGCAGAGAGA+AGG + chr8_3:53479124-53479143 Msa1295340:intron 35.0%
TGAATCGGTACATCAGAATT+TGG + chr8_3:53479188-53479207 Msa1295340:intron 35.0%
GAATCGGTACATCAGAATTT+GGG + chr8_3:53479189-53479208 Msa1295340:intron 35.0%
TACATCAGAATTTGGGCTTT+AGG + chr8_3:53479196-53479215 Msa1295340:intron 35.0%
TGCAGATATATAAAGGGGTT+AGG + chr8_3:53479235-53479254 Msa1295340:intron 35.0%
AAAGGACATGCTTCAAAAGA+TGG + chr8_3:53479617-53479636 Msa1295340:CDS 35.0%
CTATTTGTGGCTTCATATGT+TGG + chr8_3:53479669-53479688 Msa1295340:intron 35.0%
TCAGTATCAAAGTTGTTCGT+TGG + chr8_3:53479724-53479743 Msa1295340:intron 35.0%
TGTTATAAAGTTGTGGGAAG+GGG - chr8_3:53480069-53480088 None:intergenic 35.0%
CTGTTATAAAGTTGTGGGAA+GGG - chr8_3:53480070-53480089 None:intergenic 35.0%
TCTGTTATAAAGTTGTGGGA+AGG - chr8_3:53480071-53480090 None:intergenic 35.0%
AAGTAATAAGACTGCTGATG+TGG - chr8_3:53480132-53480151 None:intergenic 35.0%
ACATAAACTTTGCACACCTT+GGG + chr8_3:53480165-53480184 Msa1295340:intron 35.0%
! ATGGTTTTTCTATCTCTGCT+TGG + chr8_3:53480311-53480330 Msa1295340:intron 35.0%
CCATGCATATTTGATACTCT+AGG - chr8_3:53480413-53480432 None:intergenic 35.0%
! CCTAGAGTATCAAATATGCA+TGG + chr8_3:53480410-53480429 Msa1295340:intron 35.0%
!! TCACATTTTGGTCATGTTGT+GGG - chr8_3:53480552-53480571 None:intergenic 35.0%
!! TTCACATTTTGGTCATGTTG+TGG - chr8_3:53480553-53480572 None:intergenic 35.0%
! TGACCTCAAGTAAATTTGCT+GGG - chr8_3:53480814-53480833 None:intergenic 35.0%
TTGACCTCAAGTAAATTTGC+TGG - chr8_3:53480815-53480834 None:intergenic 35.0%
CTCAGTAGAACTGTAAACTT+TGG + chr8_3:53480941-53480960 Msa1295340:intron 35.0%
TGCTAAAGTTTACACACTGA+CGG + chr8_3:53481053-53481072 Msa1295340:intron 35.0%
AAGCCTCTAATAGACCAAAT+CGG + chr8_3:53481160-53481179 Msa1295340:CDS 35.0%
TAATGCTGGTGATTCTAATC+TGG + chr8_3:53481273-53481292 Msa1295340:CDS 35.0%
AATGCTGGTGATTCTAATCT+GGG + chr8_3:53481274-53481293 Msa1295340:CDS 35.0%
!! TACTGAACCTTTGAAGTTTC+TGG + chr8_3:53481494-53481513 Msa1295340:intron 35.0%
TCTTAACTAACTATGCCAAG+TGG + chr8_3:53481544-53481563 Msa1295340:intron 35.0%
AAGAACATAGTATGGTTGCT+CGG - chr8_3:53481624-53481643 None:intergenic 35.0%
AGAGAGAATGTACAATGAAG+AGG - chr8_3:53481698-53481717 None:intergenic 35.0%
GCATTCGTCAACAAATGTAA+AGG - chr8_3:53481785-53481804 None:intergenic 35.0%
ATAGAGGGAAACTGTTAGAA+GGG + chr8_3:53482038-53482057 Msa1295340:intron 35.0%
GTTGGATAAGAATTGGGTAA+TGG + chr8_3:53482208-53482227 Msa1295340:intron 35.0%
TTCTAGTACATATCTCTCGA+AGG + chr8_3:53482406-53482425 Msa1295340:intron 35.0%
AAAGCATGTTTGTCATACAC+TGG - chr8_3:53482456-53482475 None:intergenic 35.0%
GTATGACAAACATGCTTTCT+TGG + chr8_3:53482458-53482477 Msa1295340:intron 35.0%
ATACCTGATGTAATCATCCA+TGG - chr8_3:53482656-53482675 None:intergenic 35.0%
ATCAGGTATGAATCTTACGA+AGG + chr8_3:53482667-53482686 Msa1295340:intron 35.0%
AAGCAGGAAACAAAAATGGA+TGG + chr8_3:53482707-53482726 Msa1295340:CDS 35.0%
AGCAGGAAACAAAAATGGAT+GGG + chr8_3:53482708-53482727 Msa1295340:CDS 35.0%
ACGAGAAAAAGTCAACAACT+GGG + chr8_3:53482762-53482781 Msa1295340:intron 35.0%
AAAAACTTTCTTGTGCCATC+GGG - chr8_3:53482892-53482911 None:intergenic 35.0%
CAAAAACTTTCTTGTGCCAT+CGG - chr8_3:53482893-53482912 None:intergenic 35.0%
!! GTGTTGCTTCTTAAGTAAAG+CGG - chr8_3:53482970-53482989 None:intergenic 35.0%
ACTTAAGAAGCAACACGAAT+TGG + chr8_3:53482974-53482993 Msa1295340:CDS 35.0%
!!! GTTTTGATTTCATGCCAACT+TGG - chr8_3:53483067-53483086 None:intergenic 35.0%
TATTCTAGACTTGCACTCTA+AGG - chr8_3:53483181-53483200 None:intergenic 35.0%
CTTAAATGGGAGGTAAGTTA+AGG - chr8_3:53483245-53483264 None:intergenic 35.0%
TAAGCACTCTGATTACTTAC+AGG + chr8_3:53483283-53483302 Msa1295340:intron 35.0%
!! AAAGCTCTAAAGTGGATCAA+GGG - chr8_3:53483386-53483405 None:intergenic 35.0%
!! TAAAGCTCTAAAGTGGATCA+AGG - chr8_3:53483387-53483406 None:intergenic 35.0%
GGAATACTCAACATCTTAAC+AGG + chr8_3:53483466-53483485 Msa1295340:intron 35.0%
ACCTCACTTATTCACCTTAA+AGG + chr8_3:53483560-53483579 Msa1295340:intron 35.0%
!! ACCTTTAAGGTGAATAAGTG+AGG - chr8_3:53483564-53483583 None:intergenic 35.0%
!!! ATTTTTGGTCAAGTAGCCAA+GGG - chr8_3:53483596-53483615 None:intergenic 35.0%
!! TCTTTAGTTGGTTCGGAATA+CGG + chr8_3:53483998-53484017 Msa1295340:intron 35.0%
!! ATACGGCTTTAAGTTGTAGT+TGG + chr8_3:53484015-53484034 Msa1295340:intron 35.0%
AATTGAAGACGTATCTGTGT+CGG + chr8_3:53484101-53484120 Msa1295340:intron 35.0%
! GATACGTTTGAAATACTTCG+TGG + chr8_3:53484200-53484219 Msa1295340:intron 35.0%
TACTACATATCCGACTTCAT+GGG + chr8_3:53484350-53484369 Msa1295340:intron 35.0%
! TAAAATGATGTTGTTGGCTG+TGG + chr8_3:53484402-53484421 Msa1295340:intron 35.0%
!!! GTGGTTTTGATAGTAGCTTT+GGG + chr8_3:53484502-53484521 Msa1295340:intron 35.0%
CATGATGATTGTGGTATCAT+TGG + chr8_3:53484531-53484550 Msa1295340:intron 35.0%
ATGATTGTGGTATCATTGGA+TGG + chr8_3:53484535-53484554 Msa1295340:intron 35.0%
!! TGATGGTGGTGGAATAAATA+AGG + chr8_3:53484576-53484595 Msa1295340:intron 35.0%
CTGTAAGAAATTGGGAGAAT+AGG + chr8_3:53484617-53484636 Msa1295340:intron 35.0%
TAGGGATGACAAGAAAGTAA+TGG + chr8_3:53484681-53484700 Msa1295340:intron 35.0%
CCATGATGATTGTAGTGAAA+GGG + chr8_3:53484731-53484750 Msa1295340:intron 35.0%
! TAATGGTAGGAGGTACATAT+GGG + chr8_3:53484764-53484783 Msa1295340:intron 35.0%
TGGGATATAGTACATACACT+TGG + chr8_3:53484783-53484802 Msa1295340:intron 35.0%
TCACTCATACATTACTCAGA+GGG - chr8_3:53484840-53484859 None:intergenic 35.0%
! TGCCTCCTATGAAATTCTTT+TGG - chr8_3:53484966-53484985 None:intergenic 35.0%
GTGTTAAGATGTTGACAATG+AGG + chr8_3:53485138-53485157 Msa1295340:intron 35.0%
TAAAGGAAATGGAGGTTACA+AGG + chr8_3:53485337-53485356 Msa1295340:intron 35.0%
GGGCTGATTATCTTCTTTAC+CGG - chr8_3:53477198-53477217 None:intergenic 40.0%
GAAGATAATCAGCCCAAAAC+TGG + chr8_3:53477203-53477222 Msa1295340:CDS 40.0%
ACTGGAAGAAGTGATAACAG+AGG + chr8_3:53477221-53477240 Msa1295340:CDS 40.0%
CACGTGACACCTATATATGT+AGG - chr8_3:53477367-53477386 None:intergenic 40.0%
CTTCTGATCAAAGGCTTGTA+CGG + chr8_3:53477506-53477525 Msa1295340:intron 40.0%
GGTATCTGTGTAGTGATTCA+TGG + chr8_3:53477637-53477656 Msa1295340:intron 40.0%
! GCCACGGAATATTTTGTAAG+TGG + chr8_3:53477952-53477971 Msa1295340:intron 40.0%
GCCACTTACAAAATATTCCG+TGG - chr8_3:53477956-53477975 None:intergenic 40.0%
! CGGAATATTTTGTAAGTGGC+AGG + chr8_3:53477956-53477975 Msa1295340:intron 40.0%
TAGAGAAGAAGACTTGGCAA+AGG + chr8_3:53478130-53478149 Msa1295340:CDS 40.0%
CACTAGAGTTCATAGGAAAG+AGG + chr8_3:53478217-53478236 Msa1295340:CDS 40.0%
TCCAGATCTGTCCATTCATT+AGG + chr8_3:53478246-53478265 Msa1295340:intron 40.0%
ACCTAATGAATGGACAGATC+TGG - chr8_3:53478250-53478269 None:intergenic 40.0%
AGCAACTGCAACCTAATGAA+TGG - chr8_3:53478260-53478279 None:intergenic 40.0%
TGTATGATCCGTAGCTTGAT+TGG + chr8_3:53478339-53478358 Msa1295340:intron 40.0%
GTATGATCCGTAGCTTGATT+GGG + chr8_3:53478340-53478359 Msa1295340:intron 40.0%
ATCAAAGGACTTAAAGCCTC+TGG + chr8_3:53478480-53478499 Msa1295340:intron 40.0%
TCAAAGGACTTAAAGCCTCT+GGG + chr8_3:53478481-53478500 Msa1295340:intron 40.0%
TTCAGTGTACTCATAGGTGT+CGG + chr8_3:53478567-53478586 Msa1295340:intron 40.0%
GATGCTACGAAAGGAAAAGA+TGG + chr8_3:53478992-53479011 Msa1295340:CDS 40.0%
CTGTTGTCTAGATTATGCAC+AGG + chr8_3:53479048-53479067 Msa1295340:CDS 40.0%
GAAAAGTTAGCTGCTCAAGA+AGG + chr8_3:53479549-53479568 Msa1295340:CDS 40.0%
GAGATGAGAATGCAAGAAGA+CGG + chr8_3:53479580-53479599 Msa1295340:CDS 40.0%
TCAAAGTTGTTCGTTGGAAC+TGG + chr8_3:53479730-53479749 Msa1295340:intron 40.0%
CAAAGTTGTTCGTTGGAACT+GGG + chr8_3:53479731-53479750 Msa1295340:intron 40.0%
TAAACAAGCTATGAGGGACT+TGG + chr8_3:53479829-53479848 Msa1295340:intron 40.0%
AAACAAGCTATGAGGGACTT+GGG + chr8_3:53479830-53479849 Msa1295340:intron 40.0%
GGAAAATGGCAAATGCAGAT+AGG + chr8_3:53479946-53479965 Msa1295340:intron 40.0%
GTTATAAAGTTGTGGGAAGG+GGG - chr8_3:53480068-53480087 None:intergenic 40.0%
AGGTGTGCAAAGTTTATGTG+CGG - chr8_3:53480164-53480183 None:intergenic 40.0%
CACATAAACTTTGCACACCT+TGG + chr8_3:53480164-53480183 Msa1295340:intron 40.0%
! GATAGGGACACAAGGATTTT+GGG - chr8_3:53480204-53480223 None:intergenic 40.0%
! TGATAGGGACACAAGGATTT+TGG - chr8_3:53480205-53480224 None:intergenic 40.0%
!! AAAAGCATTCACTTCGACAC+TGG - chr8_3:53480492-53480511 None:intergenic 40.0%
!! AGAATCGAAGATTTCTGGTC+TGG - chr8_3:53480529-53480548 None:intergenic 40.0%
TTAATTGCACATCTCCACGT+TGG - chr8_3:53480774-53480793 None:intergenic 40.0%
TGCTGGGTGTATTACATTGA+AGG - chr8_3:53480798-53480817 None:intergenic 40.0%
ACACCCAGCAAATTTACTTG+AGG + chr8_3:53480808-53480827 Msa1295340:intron 40.0%
CTTGCGTGAACTAATACACT+GGG - chr8_3:53480856-53480875 None:intergenic 40.0%
ACTTGCGTGAACTAATACAC+TGG - chr8_3:53480857-53480876 None:intergenic 40.0%
TAGAACTGTAAACTTTGGGC+TGG + chr8_3:53480946-53480965 Msa1295340:intron 40.0%
CTCTAATAGACCAAATCGGT+CGG + chr8_3:53481164-53481183 Msa1295340:CDS 40.0%
TCTAATAGACCAAATCGGTC+GGG + chr8_3:53481165-53481184 Msa1295340:CDS 40.0%
GACTTGCCTGTTCCAAAATT+TGG + chr8_3:53481193-53481212 Msa1295340:CDS 40.0%
!!! AGACTGCCAAATTTTGGAAC+AGG - chr8_3:53481202-53481221 None:intergenic 40.0%
! GCTTGAAGACTGCCAAATTT+TGG - chr8_3:53481208-53481227 None:intergenic 40.0%
AATTTGGCAGTCTTCAAGCA+TGG + chr8_3:53481209-53481228 Msa1295340:CDS 40.0%
ATTTGGCAGTCTTCAAGCAT+GGG + chr8_3:53481210-53481229 Msa1295340:CDS 40.0%
!! TTTAAAGGCGTTGTCGTTTC+TGG + chr8_3:53481352-53481371 Msa1295340:intron 40.0%
!! TTTCTGGCTTGCAGAGTATT+AGG + chr8_3:53481368-53481387 Msa1295340:intron 40.0%
GGTTCAGTACAGTATTTCAG+TGG - chr8_3:53481483-53481502 None:intergenic 40.0%
!! TTTTTCGAATGACAAGACCG+TGG - chr8_3:53481863-53481882 None:intergenic 40.0%
TGATAAGCTCTTGGGATAGA+GGG + chr8_3:53482023-53482042 Msa1295340:intron 40.0%
GATAGAGGGAAACTGTTAGA+AGG + chr8_3:53482037-53482056 Msa1295340:intron 40.0%
! GGATAAGAATTGGGTAATGG+TGG + chr8_3:53482211-53482230 Msa1295340:intron 40.0%
! AGAATTGGGTAATGGTGGTA+AGG + chr8_3:53482216-53482235 Msa1295340:intron 40.0%
AAATAAATGTGGACAGGTGG+TGG + chr8_3:53482553-53482572 Msa1295340:intron 40.0%
! GTTGACTTCAATGGTACTGA+AGG + chr8_3:53482575-53482594 Msa1295340:CDS 40.0%
! TTCAATGGTACTGAAGGCAA+AGG + chr8_3:53482581-53482600 Msa1295340:CDS 40.0%
!! CTTTAAAGGTTTTGCCTCCA+TGG + chr8_3:53482636-53482655 Msa1295340:CDS 40.0%
GGTGAAGCAGGAAACAAAAA+TGG + chr8_3:53482703-53482722 Msa1295340:CDS 40.0%
GACGAGAAAAAGTCAACAAC+TGG + chr8_3:53482761-53482780 Msa1295340:intron 40.0%
ATCTGCTGTGTTCACATCTT+GGG - chr8_3:53483018-53483037 None:intergenic 40.0%
TGGCATGAAATCAAAACGCA+AGG + chr8_3:53483070-53483089 Msa1295340:CDS 40.0%
AAACGCAAGGAAGATGATGA+TGG + chr8_3:53483083-53483102 Msa1295340:CDS 40.0%
!! AAGATGATGATGGTACTGAG+TGG + chr8_3:53483093-53483112 Msa1295340:CDS 40.0%
!! AGATGATGATGGTACTGAGT+GGG + chr8_3:53483094-53483113 Msa1295340:CDS 40.0%
!! TTTTTGGTCAAGTAGCCAAG+GGG - chr8_3:53483595-53483614 None:intergenic 40.0%
!!! GATTTTTGGTCAAGTAGCCA+AGG - chr8_3:53483597-53483616 None:intergenic 40.0%
GGTCATCCAAGAGTTAACTT+AGG + chr8_3:53483964-53483983 Msa1295340:intron 40.0%
ATCCAAGAGTTAACTTAGGC+TGG + chr8_3:53483968-53483987 Msa1295340:intron 40.0%
AACCAGCCTAAGTTAACTCT+TGG - chr8_3:53483973-53483992 None:intergenic 40.0%
GCTGGTTGTCATTCTTTAGT+TGG + chr8_3:53483986-53484005 Msa1295340:intron 40.0%
TTGTGTTGCATTGCAGCTAT+TGG + chr8_3:53484044-53484063 Msa1295340:intron 40.0%
AATACTTCGTGGATACTCCT+AGG + chr8_3:53484211-53484230 Msa1295340:intron 40.0%
TACCTATCTGGAAGTTTCCT+AGG - chr8_3:53484231-53484250 None:intergenic 40.0%
!! CTACTTCTAGGATACCTATC+TGG - chr8_3:53484243-53484262 None:intergenic 40.0%
TGAAGTCGGATATGTAGTAC+TGG - chr8_3:53484349-53484368 None:intergenic 40.0%
GTACTACATATCCGACTTCA+TGG + chr8_3:53484349-53484368 Msa1295340:intron 40.0%
! TGTTGGCTGTGGAATATTCA+AGG + chr8_3:53484413-53484432 Msa1295340:intron 40.0%
!!! GGTGGTTTTGATAGTAGCTT+TGG + chr8_3:53484501-53484520 Msa1295340:intron 40.0%
AGAGAATGTCGATGCTTACT+AGG + chr8_3:53484662-53484681 Msa1295340:intron 40.0%
GAGAATGTCGATGCTTACTA+GGG + chr8_3:53484663-53484682 Msa1295340:intron 40.0%
GAAAGTAATGGCAGCTAAAG+TGG + chr8_3:53484693-53484712 Msa1295340:intron 40.0%
GCCATGATGATTGTAGTGAA+AGG + chr8_3:53484730-53484749 Msa1295340:intron 40.0%
CCCTTTCACTACAATCATCA+TGG - chr8_3:53484734-53484753 None:intergenic 40.0%
! GTAATGGTAGGAGGTACATA+TGG + chr8_3:53484763-53484782 Msa1295340:intron 40.0%
CTCACTCATACATTACTCAG+AGG - chr8_3:53484841-53484860 None:intergenic 40.0%
ATCTTAACACATGGTTCTCC+TGG - chr8_3:53485128-53485147 None:intergenic 40.0%
TGACAATGAGGTCATTGAGT+AGG + chr8_3:53485150-53485169 Msa1295340:intron 40.0%
TCATCTTCATTGTCTTCTGC+TGG - chr8_3:53485389-53485408 None:intergenic 40.0%
ACAATGAAGATGATGTCGAC+TGG + chr8_3:53485396-53485415 Msa1295340:CDS 40.0%
! CAATGAAGATGATGTCGACT+GGG + chr8_3:53485397-53485416 Msa1295340:CDS 40.0%
!! ACATTTTAGCACAGCGCTTC+TGG - chr8_3:53477423-53477442 None:intergenic 45.0%
GGTGTCCATATTTGACACAC+TGG + chr8_3:53477536-53477555 Msa1295340:intron 45.0%
AAGCTTCTAGTCACAAGGCA+GGG - chr8_3:53478456-53478475 None:intergenic 45.0%
AAAGCTTCTAGTCACAAGGC+AGG - chr8_3:53478457-53478476 None:intergenic 45.0%
CACATACACTGGACACAACA+CGG + chr8_3:53478519-53478538 Msa1295340:intron 45.0%
CTTTCACAATGCACAAGGGA+GGG - chr8_3:53478768-53478787 None:intergenic 45.0%
ACTTTCACAATGCACAAGGG+AGG - chr8_3:53478769-53478788 None:intergenic 45.0%
AAGTTAGCTGCTCAAGAAGG+TGG + chr8_3:53479552-53479571 Msa1295340:CDS 45.0%
ATGAGAATGCAAGAAGACGG+CGG + chr8_3:53479583-53479602 Msa1295340:CDS 45.0%
GGACATGCTTCAAAAGATGG+AGG + chr8_3:53479620-53479639 Msa1295340:CDS 45.0%
AACAAGCTATGAGGGACTTG+GGG + chr8_3:53479831-53479850 Msa1295340:intron 45.0%
!! AGGATTTTGGGTCAGCAAAG+TGG - chr8_3:53480192-53480211 None:intergenic 45.0%
!! ACGGTTTTGATAGGGACACA+AGG - chr8_3:53480212-53480231 None:intergenic 45.0%
GTGGGAGAATCGAAGATTTC+TGG - chr8_3:53480534-53480553 None:intergenic 45.0%
TGTTTGGGGATAGTTGGCAT+TGG - chr8_3:53480682-53480701 None:intergenic 45.0%
! ACTAATCCCACAGGGTGTTT+GGG - chr8_3:53480697-53480716 None:intergenic 45.0%
CTTGGTTCACTAATCCCACA+GGG - chr8_3:53480705-53480724 None:intergenic 45.0%
TCTTGGTTCACTAATCCCAC+AGG - chr8_3:53480706-53480725 None:intergenic 45.0%
TAAACAGCGAGTACAGTCAG+CGG - chr8_3:53480981-53481000 None:intergenic 45.0%
TGTACATGCACTAGCACAAG+AGG - chr8_3:53481136-53481155 None:intergenic 45.0%
!! CGACCGATTTGGTCTATTAG+AGG - chr8_3:53481166-53481185 None:intergenic 45.0%
GCAGCTAATGGAGATAATGC+TGG + chr8_3:53481259-53481278 Msa1295340:CDS 45.0%
ACTCCAGTCTGATAAGCTCT+TGG + chr8_3:53482014-53482033 Msa1295340:intron 45.0%
CTCCAGTCTGATAAGCTCTT+GGG + chr8_3:53482015-53482034 Msa1295340:intron 45.0%
ATCCCAAGAGCTTATCAGAC+TGG - chr8_3:53482020-53482039 None:intergenic 45.0%
CTGATAAGCTCTTGGGATAG+AGG + chr8_3:53482022-53482041 Msa1295340:intron 45.0%
AAACTGTTAGAAGGGAGAGG+AGG + chr8_3:53482046-53482065 Msa1295340:intron 45.0%
CCTGATGTAATCATCCATGG+AGG - chr8_3:53482653-53482672 None:intergenic 45.0%
CCTCCATGGATGATTACATC+AGG + chr8_3:53482650-53482669 Msa1295340:CDS 45.0%
AATCTTACGAAGGAACAGCG+CGG + chr8_3:53482677-53482696 Msa1295340:intron 45.0%
TCTGCTGTGTTCACATCTTG+GGG - chr8_3:53483017-53483036 None:intergenic 45.0%
CATCTGCTGTGTTCACATCT+TGG - chr8_3:53483019-53483038 None:intergenic 45.0%
!! CGATTGGAAGTACTGCTAGA+AGG - chr8_3:53483044-53483063 None:intergenic 45.0%
AGTACTTCCAATCGCCAAGT+TGG + chr8_3:53483050-53483069 Msa1295340:CDS 45.0%
TTTCATGCCAACTTGGCGAT+TGG - chr8_3:53483060-53483079 None:intergenic 45.0%
TCAAGGGTGATGATCATGCA+TGG - chr8_3:53483370-53483389 None:intergenic 45.0%
ACCAACTGAGCTAAGCTCAT+GGG - chr8_3:53483500-53483519 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+TGG - chr8_3:53483501-53483520 None:intergenic 45.0%
ATGAGCTTAGCTCAGTTGGT+AGG + chr8_3:53483500-53483519 Msa1295340:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + chr8_3:53483501-53483520 Msa1295340:intron 45.0%
! AGGTGAATAAGTGAGGTGTC+CGG - chr8_3:53483557-53483576 None:intergenic 45.0%
AGGGGCTAGATTCACCTTTA+AGG - chr8_3:53483577-53483596 None:intergenic 45.0%
TAAAGGTGAATCTAGCCCCT+TGG + chr8_3:53483577-53483596 Msa1295340:intron 45.0%
TTGGATGACCTTGAGAGCAA+AGG - chr8_3:53483954-53483973 None:intergenic 45.0%
! TAGAGTATCCAGGCTACCAT+AGG - chr8_3:53484080-53484099 None:intergenic 45.0%
TGTCGGATACCAAAACTCCT+AGG + chr8_3:53484118-53484137 Msa1295340:intron 45.0%
CAAAACTCCTAGGACACTTC+CGG + chr8_3:53484128-53484147 Msa1295340:intron 45.0%
!! TATGTATCCGGAAGTGTCCT+AGG - chr8_3:53484138-53484157 None:intergenic 45.0%
CTCCTAGGAAACTTCCAGAT+AGG + chr8_3:53484226-53484245 Msa1295340:intron 45.0%
!! CGGATATGTAGTACTGGTAC+AGG - chr8_3:53484343-53484362 None:intergenic 45.0%
ATATCCGACTTCATGGGTCA+CGG + chr8_3:53484356-53484375 Msa1295340:intron 45.0%
GGGTGATGTCATGATGATTG+TGG + chr8_3:53484522-53484541 Msa1295340:intron 45.0%
CATCAGCAACATTCATGCGA+TGG - chr8_3:53484561-53484580 None:intergenic 45.0%
CATCGCATGAATGTTGCTGA+TGG + chr8_3:53484559-53484578 Msa1295340:intron 45.0%
!! ATGAATGTTGCTGATGGTGG+TGG + chr8_3:53484565-53484584 Msa1295340:intron 45.0%
GAAAGGGACAGCAGTTGTAA+TGG + chr8_3:53484747-53484766 Msa1295340:intron 45.0%
ACAGCAGTTGTAATGGTAGG+AGG + chr8_3:53484754-53484773 Msa1295340:intron 45.0%
! ACGAAAACCCCCCTGATTTT+TGG - chr8_3:53485031-53485050 None:intergenic 45.0%
AGGAAATGGAGGTTACAAGG+TGG + chr8_3:53485340-53485359 Msa1295340:intron 45.0%
ATTGTCTTCTGCTGGAGCAT+CGG - chr8_3:53485381-53485400 None:intergenic 45.0%
!! TATAATTTAAACTAAATTAA+GGG - chr8_3:53483341-53483360 None:intergenic 5.0%
!! ATATAATTTAAACTAAATTA+AGG - chr8_3:53483342-53483361 None:intergenic 5.0%
!!! ATTAGTTTTTTTTTTTTTTT+TGG + chr8_3:53483777-53483796 Msa1295340:intron 5.0%
!!! TTAGTTTTTTTTTTTTTTTT+GGG + chr8_3:53483778-53483797 Msa1295340:intron 5.0%
!! AAATAAAAAATAATTTACAA+TGG + chr8_3:53483907-53483926 Msa1295340:intron 5.0%
!! GAGGGCATCAAGGATGACTA+CGG - chr8_3:53477252-53477271 None:intergenic 50.0%
CATCAGTGTCTGTGCCTCAT+AGG - chr8_3:53477310-53477329 None:intergenic 50.0%
CTATGAGGCACAGACACTGA+TGG + chr8_3:53477308-53477327 Msa1295340:intron 50.0%
AAAGGCTTGTACGGTTCGAC+TGG + chr8_3:53477515-53477534 Msa1295340:intron 50.0%
TCAGTGTCGTGTCTGGTATC+TGG + chr8_3:53477616-53477635 Msa1295340:intron 50.0%
ATGTCCGTGTGTCGTGTTTC+TGG + chr8_3:53477725-53477744 Msa1295340:intron 50.0%
GACACCAGAAACACGACACA+CGG - chr8_3:53477732-53477751 None:intergenic 50.0%
GTGTGCTCCCAATCAAGCTA+CGG - chr8_3:53478350-53478369 None:intergenic 50.0%
TGTATGTGTCCGTGCGTCAT+AGG - chr8_3:53478507-53478526 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG - chr8_3:53478629-53478648 None:intergenic 50.0%
TGTCCGTGCTTCATAGCTCT+GGG + chr8_3:53478634-53478653 Msa1295340:intron 50.0%
ATCAGCTGTAGCAGCTACAG+CGG - chr8_3:53478975-53478994 None:intergenic 50.0%
GCTACAGCTGATGCTACGAA+AGG + chr8_3:53478983-53479002 Msa1295340:CDS 50.0%
! ACAACGCTTTGGATGCACTG+CGG + chr8_3:53479457-53479476 Msa1295340:CDS 50.0%
!! TTGGTGTTGAGGTCTGCATC+AGG - chr8_3:53479869-53479888 None:intergenic 50.0%
GAAGGGGGTAGAGAGAGATT+AGG - chr8_3:53480053-53480072 None:intergenic 50.0%
GTGGCAGTAGAGTCAGTGAA+GGG - chr8_3:53480113-53480132 None:intergenic 50.0%
TGTGGCAGTAGAGTCAGTGA+AGG - chr8_3:53480114-53480133 None:intergenic 50.0%
! TTGGGGATAGTTGGCATTGG+TGG - chr8_3:53480679-53480698 None:intergenic 50.0%
! ACAGGGTGTTTGGGGATAGT+TGG - chr8_3:53480688-53480707 None:intergenic 50.0%
AACTATCCCCAAACACCCTG+TGG + chr8_3:53480687-53480706 Msa1295340:intron 50.0%
ACTATCCCCAAACACCCTGT+GGG + chr8_3:53480688-53480707 Msa1295340:intron 50.0%
! CTAATCCCACAGGGTGTTTG+GGG - chr8_3:53480696-53480715 None:intergenic 50.0%
! CACTAATCCCACAGGGTGTT+TGG - chr8_3:53480698-53480717 None:intergenic 50.0%
AGTCTTCTACCCGACCGATT+TGG - chr8_3:53481177-53481196 None:intergenic 50.0%
GTCTTCAAGCATGGGAAGCT+CGG + chr8_3:53481218-53481237 Msa1295340:CDS 50.0%
TCTTCAAGCATGGGAAGCTC+GGG + chr8_3:53481219-53481238 Msa1295340:CDS 50.0%
ACCTTGGTATCTCCGCTGTA+TGG - chr8_3:53481319-53481338 None:intergenic 50.0%
TAACTATGCCAAGTGGCTGC+TGG + chr8_3:53481551-53481570 Msa1295340:intron 50.0%
TCAGTTAACCAGCAGCCACT+TGG - chr8_3:53481562-53481581 None:intergenic 50.0%
CGAATGACAAGACCGTGGAA+AGG - chr8_3:53481858-53481877 None:intergenic 50.0%
GGGAAACTGTTAGAAGGGAG+AGG + chr8_3:53482043-53482062 Msa1295340:intron 50.0%
! AGAGGAGGCATAGCAGAATG+AGG + chr8_3:53482061-53482080 Msa1295340:intron 50.0%
GGCAGGTGGTATTTGATGAG+TGG + chr8_3:53482082-53482101 Msa1295340:intron 50.0%
AGAGAGGGGTCAATGTGAGT+TGG + chr8_3:53482190-53482209 Msa1295340:intron 50.0%
! GGGTAATGGTGGTAAGGCTT+TGG + chr8_3:53482222-53482241 Msa1295340:intron 50.0%
AGAAGACATCAGTCCCACCA+AGG - chr8_3:53482248-53482267 None:intergenic 50.0%
! CAGGTGGTGGTTGACTTCAA+TGG + chr8_3:53482566-53482585 Msa1295340:intron 50.0%
! TGGTACTGAAGGCAAAGGAG+AGG + chr8_3:53482586-53482605 Msa1295340:CDS 50.0%
! GGTACTGAAGGCAAAGGAGA+GGG + chr8_3:53482587-53482606 Msa1295340:CDS 50.0%
GTCTGTGTATTGAGCTGCTG+TGG - chr8_3:53482744-53482763 None:intergenic 50.0%
AACTTTCTTGTGCCATCGGG+AGG - chr8_3:53482889-53482908 None:intergenic 50.0%
! TGATGGTACTGAGTGGGAAG+AGG + chr8_3:53483100-53483119 Msa1295340:CDS 50.0%
TCCCATGAGCTTAGCTCAGT+TGG + chr8_3:53483496-53483515 Msa1295340:intron 50.0%
! GTGAATAAGTGAGGTGTCCG+GGG - chr8_3:53483555-53483574 None:intergenic 50.0%
! GGTGAATAAGTGAGGTGTCC+GGG - chr8_3:53483556-53483575 None:intergenic 50.0%
GGAAAGAAGTCCACATGCAG+AGG + chr8_3:53483669-53483688 Msa1295340:intron 50.0%
TCCACATGCAGAGGTTCAAC+TGG + chr8_3:53483678-53483697 Msa1295340:intron 50.0%
CCACATGCAGAGGTTCAACT+GGG + chr8_3:53483679-53483698 Msa1295340:intron 50.0%
CACATGCAGAGGTTCAACTG+GGG + chr8_3:53483680-53483699 Msa1295340:intron 50.0%
GATGACCTTGAGAGCAAAGG+CGG - chr8_3:53483951-53483970 None:intergenic 50.0%
TTGCAGCTATTGGCATGCCA+AGG + chr8_3:53484054-53484073 Msa1295340:intron 50.0%
TATTGGCATGCCAAGGCCTA+TGG + chr8_3:53484061-53484080 Msa1295340:intron 50.0%
!!! CGGAAGTGTCCTAGGAGTTT+TGG - chr8_3:53484130-53484149 None:intergenic 50.0%
GGTACAGGAGCGATACGATA+CGG - chr8_3:53484328-53484347 None:intergenic 50.0%
ACCTTGACGCTTAACAGCGA+TGG + chr8_3:53484475-53484494 Msa1295340:intron 50.0%
CCTTGACGCTTAACAGCGAT+GGG + chr8_3:53484476-53484495 Msa1295340:intron 50.0%
CGCATGAATGTTGCTGATGG+TGG + chr8_3:53484562-53484581 Msa1295340:intron 50.0%
GCAGCTAAAGTGGTAGCTGA+TGG + chr8_3:53484703-53484722 Msa1295340:intron 50.0%
GGGACAGCAGTTGTAATGGT+AGG + chr8_3:53484751-53484770 Msa1295340:intron 50.0%
! GATGATGTCGACTGGGAAGA+AGG + chr8_3:53485404-53485423 Msa1295340:CDS 50.0%
TCATCCTTGATGCCCTCACC+AGG + chr8_3:53477255-53477274 Msa1295340:intron 55.0%
!! TGAACCTGGTGAGGGCATCA+AGG - chr8_3:53477262-53477281 None:intergenic 55.0%
CGACACTGACGCGTTGAAAC+CGG - chr8_3:53477605-53477624 None:intergenic 55.0%
TGACGCACGGACACATACAC+TGG + chr8_3:53478508-53478527 Msa1295340:intron 55.0%
GATTAGGTGTGTCCCGGTGT+CGG - chr8_3:53478607-53478626 None:intergenic 55.0%
! TCCTCGGATTAGGTGTGTCC+CGG - chr8_3:53478613-53478632 None:intergenic 55.0%
GTGTCCGTGCTTCATAGCTC+TGG + chr8_3:53478633-53478652 Msa1295340:intron 55.0%
GCTGCTCAAGAAGGTGGAGA+TGG + chr8_3:53479558-53479577 Msa1295340:CDS 55.0%
ACGGCGGCGCGAAAAGTTAA+AGG + chr8_3:53479599-53479618 Msa1295340:CDS 55.0%
TCTGTGGAGCTCAGCTCTGT+GGG - chr8_3:53479990-53480009 None:intergenic 55.0%
GTATCTCCGCTGTATGGCAG+TGG - chr8_3:53481313-53481332 None:intergenic 55.0%
GCCATACAGCGGAGATACCA+AGG + chr8_3:53481315-53481334 Msa1295340:CDS 55.0%
GAGGCATAGCAGAATGAGGC+AGG + chr8_3:53482065-53482084 Msa1295340:intron 55.0%
GCATAGCAGAATGAGGCAGG+TGG + chr8_3:53482068-53482087 Msa1295340:intron 55.0%
! TGGTGGTAAGGCTTTGGCCT+TGG + chr8_3:53482228-53482247 Msa1295340:intron 55.0%
!! TGGTAAGGCTTTGGCCTTGG+TGG + chr8_3:53482231-53482250 Msa1295340:intron 55.0%
!! GGTAAGGCTTTGGCCTTGGT+GGG + chr8_3:53482232-53482251 Msa1295340:intron 55.0%
TGGGAAGAGGCTCCTGTTAG+AGG + chr8_3:53483113-53483132 Msa1295340:CDS 55.0%
TATATGCAAGGGCCGAACCC+CGG + chr8_3:53483535-53483554 Msa1295340:intron 55.0%
! TAAGTGAGGTGTCCGGGGTT+CGG - chr8_3:53483550-53483569 None:intergenic 55.0%
CCCAGTTGAACCTCTGCATG+TGG - chr8_3:53483682-53483701 None:intergenic 55.0%
CTTGAGAGCAAAGGCGGAAC+TGG - chr8_3:53483945-53483964 None:intergenic 55.0%
CAGTTCCGCCTTTGCTCTCA+AGG + chr8_3:53483943-53483962 Msa1295340:intron 55.0%
ATCCAGGCTACCATAGGCCT+TGG - chr8_3:53484074-53484093 None:intergenic 55.0%
GCCAGTTGCATAGTGGCCAT+GGG + chr8_3:53484378-53484397 Msa1295340:intron 55.0%
TCCCATGGCCACTATGCAAC+TGG - chr8_3:53484382-53484401 None:intergenic 55.0%
CCCATCGCTGTTAAGCGTCA+AGG - chr8_3:53484479-53484498 None:intergenic 55.0%
GACGCTTAACAGCGATGGGA+AGG + chr8_3:53484480-53484499 Msa1295340:intron 55.0%
GCTTAACAGCGATGGGAAGG+TGG + chr8_3:53484483-53484502 Msa1295340:intron 55.0%
AACCAGATTCGTGAGGCTGG+GGG - chr8_3:53485105-53485124 None:intergenic 55.0%
GAACCAGATTCGTGAGGCTG+GGG - chr8_3:53485106-53485125 None:intergenic 55.0%
GGAACCAGATTCGTGAGGCT+GGG - chr8_3:53485107-53485126 None:intergenic 55.0%
TGGAACCAGATTCGTGAGGC+TGG - chr8_3:53485108-53485127 None:intergenic 55.0%
! AGCCTCACGAATCTGGTTCC+AGG + chr8_3:53485107-53485126 Msa1295340:intron 55.0%
CTCCTGGAACCAGATTCGTG+AGG - chr8_3:53485112-53485131 None:intergenic 55.0%
CAACGCGTCAGTGTCGTGTC+TGG + chr8_3:53477609-53477628 Msa1295340:intron 60.0%
GTGTCCATGCGTCGTGTGTC+TGG + chr8_3:53477747-53477766 Msa1295340:intron 60.0%
GACACCAGACACACGACGCA+TGG - chr8_3:53477754-53477773 None:intergenic 60.0%
ACCGGGACACACCTAATCCG+AGG + chr8_3:53478609-53478628 Msa1295340:intron 60.0%
GCACGGACACTCCTCGGATT+AGG - chr8_3:53478623-53478642 None:intergenic 60.0%
GGGCCCAGAGCTATGAAGCA+CGG - chr8_3:53478640-53478659 None:intergenic 60.0%
CTCTGTGGAGCTCAGCTCTG+TGG - chr8_3:53479991-53480010 None:intergenic 60.0%
GGGTCAGCAAAGTGGACCCA+AGG - chr8_3:53480184-53480203 None:intergenic 60.0%
! GCTCTGAACCAGCTCCAACG+TGG + chr8_3:53480757-53480776 Msa1295340:intron 60.0%
GCACATCTCCACGTTGGAGC+TGG - chr8_3:53480768-53480787 None:intergenic 60.0%
!! AAGCTCGGGCTAGTGCAGCT+GGG + chr8_3:53481233-53481252 Msa1295340:CDS 60.0%
! GGAGCACCACTGCCATACAG+CGG + chr8_3:53481304-53481323 Msa1295340:CDS 60.0%
TACGAAGGAACAGCGCGGAG+AGG + chr8_3:53482682-53482701 Msa1295340:intron 60.0%
TCTTGTGCCATCGGGAGGCA+GGG - chr8_3:53482884-53482903 None:intergenic 60.0%
TTCTTGTGCCATCGGGAGGC+AGG - chr8_3:53482885-53482904 None:intergenic 60.0%
TGCCAAGGCCTATGGTAGCC+TGG + chr8_3:53484069-53484088 Msa1295340:intron 60.0%
CTGGCCGTGACCCATGAAGT+CGG - chr8_3:53484363-53484382 None:intergenic 60.0%
GGTCACGGCCAGTTGCATAG+TGG + chr8_3:53484371-53484390 Msa1295340:intron 60.0%
GGCCAGTTGCATAGTGGCCA+TGG + chr8_3:53484377-53484396 Msa1295340:intron 60.0%
ACCAGATTCGTGAGGCTGGG+GGG - chr8_3:53485104-53485123 None:intergenic 60.0%
GCCTCTGGGCCTATGACGCA+CGG + chr8_3:53478495-53478514 Msa1295340:intron 65.0%
TCCGTGCGTCATAGGCCCAG+AGG - chr8_3:53478499-53478518 None:intergenic 65.0%
GTGGAGCTCAGCTCTGTGGG+TGG - chr8_3:53479987-53480006 None:intergenic 65.0%
!! GAAGCTCGGGCTAGTGCAGC+TGG + chr8_3:53481232-53481251 Msa1295340:CDS 65.0%
GCAGCTGGGCGTGCAGCTAA+TGG + chr8_3:53481247-53481266 Msa1295340:CDS 65.0%
ACAGCGCGGAGAGGTGAAGC+AGG + chr8_3:53482691-53482710 Msa1295340:CDS 65.0%
TCCTTGTCCCTGCCTCCCGA+TGG + chr8_3:53482874-53482893 Msa1295340:intron 65.0%
CCAGATTCGTGAGGCTGGGG+GGG - chr8_3:53485103-53485122 None:intergenic 65.0%
CACCGACGCGTGTCCGACAC+CGG + chr8_3:53478591-53478610 Msa1295340:intron 70.0%
ACCGACGCGTGTCCGACACC+GGG + chr8_3:53478592-53478611 Msa1295340:intron 70.0%
! TCCCGGTGTCGGACACGCGT+CGG - chr8_3:53478596-53478615 None:intergenic 70.0%
GCCATCGGGAGGCAGGGACA+AGG - chr8_3:53482878-53482897 None:intergenic 70.0%
CCCCCCCAGCCTCACGAATC+TGG + chr8_3:53485100-53485119 Msa1295340:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 53477154 53485427 53477154 ID=Msa1295340;Name=Msa1295340
chr8_3 mRNA 53477154 53485427 53477154 ID=Msa1295340-mRNA-1;Parent=Msa1295340;Name=Msa1295340-mRNA-1;_AED=0.10;_eAED=0.16;_QI=29|0.33|0.1|1|0.55|0.5|10|0|424
chr8_3 exon 53477154 53477250 53477154 ID=Msa1295340-mRNA-1:exon:15317;Parent=Msa1295340-mRNA-1
chr8_3 exon 53478118 53478238 53478118 ID=Msa1295340-mRNA-1:exon:15318;Parent=Msa1295340-mRNA-1
chr8_3 exon 53478944 53479069 53478944 ID=Msa1295340-mRNA-1:exon:15319;Parent=Msa1295340-mRNA-1
chr8_3 exon 53479240 53479349 53479240 ID=Msa1295340-mRNA-1:exon:15320;Parent=Msa1295340-mRNA-1
chr8_3 exon 53479455 53479645 53479455 ID=Msa1295340-mRNA-1:exon:15321;Parent=Msa1295340-mRNA-1
chr8_3 exon 53481146 53481336 53481146 ID=Msa1295340-mRNA-1:exon:15322;Parent=Msa1295340-mRNA-1
chr8_3 exon 53482569 53482671 53482569 ID=Msa1295340-mRNA-1:exon:15323;Parent=Msa1295340-mRNA-1
chr8_3 exon 53482689 53482771 53482689 ID=Msa1295340-mRNA-1:exon:15324;Parent=Msa1295340-mRNA-1
chr8_3 exon 53482942 53483134 53482942 ID=Msa1295340-mRNA-1:exon:15325;Parent=Msa1295340-mRNA-1
chr8_3 exon 53485342 53485427 53485342 ID=Msa1295340-mRNA-1:exon:15326;Parent=Msa1295340-mRNA-1
chr8_3 five_prime_UTR 53477154 53477182 53477154 ID=Msa1295340-mRNA-1:five_prime_utr;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53477183 53477250 53477183 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53478118 53478238 53478118 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53478944 53479069 53478944 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53479240 53479349 53479240 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53479455 53479645 53479455 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53481146 53481336 53481146 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53482569 53482671 53482569 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53482689 53482771 53482689 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53482942 53483134 53482942 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
chr8_3 CDS 53485342 53485427 53485342 ID=Msa1295340-mRNA-1:cds;Parent=Msa1295340-mRNA-1
Gene Sequence

>Msa1295340

ATGATGATTATACCGGTAAAGAAGATAATCAGCCCAAAACTGGAAGAAGTGATAACAGAGGAATTGCCGAAACAATGGATTAGAGAAGAAGACTTGGCAAAGGACCTCAAATTGCATACAAAGCAACTTCGTCGAACATTGTGCTTCTTTGAAAAAGAAAAGATTATCACTAGAGTTCATAGGAAAGAGACAGCAAAAGGTGCAAAAATATATAGTGCCGCTGTAGCTGCTACAGCTGATGCTACGAAAGGAAAAGATGGAGAAGAAAAGGTCAAGCTACACACACACTCTTACTGTTGTCTAGATTATGCACAGATATATAAAGGGGTTAGGTACAGACTGCATCAGATGAAGCATAAGTTGAAAGATGAATTGGAGAACAAAAACACCGTTCGAGAATATATATGTACAAATTGTGGAAAAAGATACAACGCTTTGGATGCACTGCGGTTAATATCTCTTGAAGATGAAGAAGACTTCCATTGTGAATGTTGTAATGGAAAACTAGAGGTTGAAAGTGAAAAGTTAGCTGCTCAAGAAGGTGGAGATGGAGATGAGAATGCAAGAAGACGGCGGCGCGAAAAGTTAAAGGACATGCTTCAAAAGATGGAGGTTCTGCATGTACAACTCAAGCCTCTAATAGACCAAATCGGTCGGGTAGAAGACTTGCCTGTTCCAAAATTTGGCAGTCTTCAAGCATGGGAAGCTCGGGCTAGTGCAGCTGGGCGTGCAGCTAATGGAGATAATGCTGGTGATTCTAATCTGGGATATAATGGAGCACCACTGCCATACAGCGGAGATACCAAGGTGGTGGTTGACTTCAATGGTACTGAAGGCAAAGGAGAGGGTGTTAAATCTGAAACTGACAGTACATCTTTAAAGGTTTTGCCTCCATGGATGATTACATCAGGAACAGCGCGGAGAGGTGAAGCAGGAAACAAAAATGGATGGGACTTCAACTTCCACAGCAGCTCAATACACAGACGAGAAAAAGATGAGTATATCAAGGCTTATTATGCCGCTTTACTTAAGAAGCAACACGAATTGGAAGAAGCTGCGAAAATTCCCCAAGATGTGAACACAGCAGATGATCCTTCTAGCAGTACTTCCAATCGCCAAGTTGGCATGAAATCAAAACGCAAGGAAGATGATGATGGTACTGAGTGGGAAGAGGCTCCTGTTAGAGGAAATGGAGGTTACAAGGTGGATTTGAATGTTGAAGCCGATGCTCCAGCAGAAGACAATGAAGATGATGTCGACTGGGAAGAAGGT

Protein sequence

>Msa1295340

MMIIPVKKIISPKLEEVITEELPKQWIREEDLAKDLKLHTKQLRRTLCFFEKEKIITRVHRKETAKGAKIYSAAVAATADATKGKDGEEKVKLHTHSYCCLDYAQIYKGVRYRLHQMKHKLKDELENKNTVREYICTNCGKRYNALDALRLISLEDEEDFHCECCNGKLEVESEKLAAQEGGDGDENARRRRREKLKDMLQKMEVLHVQLKPLIDQIGRVEDLPVPKFGSLQAWEARASAAGRAANGDNAGDSNLGYNGAPLPYSGDTKVVVDFNGTEGKGEGVKSETDSTSLKVLPPWMITSGTARRGEAGNKNGWDFNFHSSSIHRREKDEYIKAYYAALLKKQHELEEAAKIPQDVNTADDPSSSTSNRQVGMKSKRKEDDDGTEWEEAPVRGNGGYKVDLNVEADAPAEDNEDDVDWEEG