AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1296580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296580 MtrunA17_Chr4g0053381 97.214 359 10 0 1 359 1 359 0.0 719
Msa1296580 MtrunA17_Chr1g0208231 54.603 315 133 5 47 355 68 378 7.00e-115 338
Msa1296580 MtrunA17_Chr3g0134261 55.663 309 117 6 42 340 46 344 2.72e-109 323
Msa1296580 MtrunA17_Chr4g0041721 36.667 240 140 6 81 315 91 323 7.84e-47 162
Msa1296580 MtrunA17_Chr3g0133211 36.000 275 153 5 5 258 1 273 2.44e-46 161
Msa1296580 MtrunA17_Chr5g0412471 33.333 315 179 11 8 308 11 308 9.47e-44 154
Msa1296580 MtrunA17_Chr5g0414271 38.017 242 133 6 52 283 43 277 1.01e-40 146
Msa1296580 MtrunA17_Chr8g0364521 37.799 209 117 3 81 283 93 294 1.28e-35 133
Msa1296580 MtrunA17_Chr5g0427191 29.530 298 194 7 53 341 55 345 5.79e-33 125
Msa1296580 MtrunA17_Chr8g0367661 33.448 290 152 12 52 312 61 338 1.81e-30 119
Msa1296580 MtrunA17_Chr5g0401271 35.802 162 99 3 78 239 99 255 1.33e-28 114
Msa1296580 MtrunA17_Chr2g0323361 28.352 261 171 7 82 336 51 301 1.66e-27 110
Msa1296580 MtrunA17_Chr3g0134781 39.098 133 80 1 69 201 54 185 1.07e-26 108
Msa1296580 MtrunA17_Chr2g0280941 30.526 190 115 5 76 256 35 216 1.39e-23 98.2
Msa1296580 MtrunA17_Chr4g0054011 32.227 211 120 8 78 275 64 264 1.21e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296580 AT5G67260.1 51.389 360 149 8 11 359 23 367 1.90e-113 335
Msa1296580 AT5G67260.2 51.143 350 145 8 11 349 23 357 4.83e-108 322
Msa1296580 AT3G50070.1 48.747 359 161 7 8 359 19 361 6.64e-101 302
Msa1296580 AT4G34160.1 54.365 252 111 2 43 294 51 298 1.65e-93 284
Msa1296580 AT2G22490.1 37.918 269 146 10 52 308 64 323 4.64e-44 155
Msa1296580 AT5G65420.4 36.842 247 135 5 8 246 9 242 2.90e-43 151
Msa1296580 AT5G65420.1 36.842 247 135 5 8 246 9 242 6.41e-43 151
Msa1296580 AT2G22490.2 36.131 274 145 10 52 308 64 324 1.33e-42 152
Msa1296580 AT5G65420.2 39.899 198 104 3 5 197 6 193 1.71e-42 148
Msa1296580 AT5G65420.3 35.385 260 137 6 5 246 6 252 4.74e-40 144
Msa1296580 AT1G70210.1 36.992 246 135 7 50 283 47 284 5.87e-40 144
Msa1296580 AT5G10440.2 36.702 188 114 3 51 233 34 221 3.41e-35 129
Msa1296580 AT5G10440.1 37.624 202 114 5 51 244 34 231 3.42e-35 130
Msa1296580 AT4G37630.3 32.738 168 92 4 51 198 23 189 1.24e-21 93.2
Msa1296580 AT4G37630.2 32.530 166 93 3 51 198 23 187 1.57e-21 93.2
Msa1296580 AT4G37630.1 32.738 168 92 4 51 198 23 189 2.34e-21 93.6
Msa1296580 AT4G03270.1 27.711 249 163 9 34 273 8 248 3.67e-18 84.3
Msa1296580 AT5G02110.1 32.738 168 110 2 71 238 67 231 3.27e-17 82.0
Msa1296580 AT4G03270.2 27.711 249 162 10 34 273 8 247 1.67e-16 79.7
Msa1296580 AT5G02110.2 35.965 114 70 2 125 238 92 202 2.02e-11 64.7

Find 102 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCCACTTTGTTGTTTA+AGG 0.045934 8_3:+56229120 Msa1296580:three_prime_UTR
CAGATACGCGCTTACGTTTC+TGG 0.117684 8_3:-56228722 None:intergenic
ATGTACTCAGTTGCATTAAA+TGG 0.206291 8_3:-56228460 None:intergenic
AACCCATGTGCCACTTCTTT+TGG 0.207318 8_3:+56227878 Msa1296580:CDS
TCTAGAGTTTGTGCTCATTA+TGG 0.211445 8_3:+56227717 Msa1296580:CDS
CTAGAGTTTGTGCTCATTAT+GGG 0.225299 8_3:+56227718 Msa1296580:CDS
TAACTAGAACATAATGTAAT+TGG 0.246056 8_3:-56229036 None:intergenic
TGTTCAACAATGATATGTTT+TGG 0.249151 8_3:+56227577 Msa1296580:CDS
TCCATTCATCTTCAAATGTT+TGG 0.288440 8_3:-56229075 None:intergenic
AGCTCTCTTTCACATAATTC+TGG 0.291480 8_3:+56228986 Msa1296580:three_prime_UTR
GATAAAGATTGAAGCTTTGT+AGG 0.295841 8_3:-56227549 None:intergenic
GGAAGGAGATGGAGCGTTTA+CGG 0.322201 8_3:-56227088 None:intergenic
TATACAAAGAATGGAGCTTT+TGG 0.337064 8_3:+56228081 Msa1296580:CDS
CAAAATCATCATTAATCAAA+TGG 0.341802 8_3:-56227644 None:intergenic
GTTGGTAATGGTTTCGGAAT+CGG 0.369861 8_3:-56227517 None:intergenic
ATGTGTTCAAAGAATGAAAT+TGG 0.377203 8_3:-56228142 None:intergenic
CACTGTTGTTGTCAGATTCA+AGG 0.379599 8_3:+56228368 Msa1296580:intron
ATTGTGAGAAAGGGAGAGAA+AGG 0.388786 8_3:-56227392 None:intergenic
AGAGGTTGAGACATCTTCTA+TGG 0.391132 8_3:-56227441 None:intergenic
AAGTTATTAGTTTGCAATGA+TGG 0.397655 8_3:+56228684 Msa1296580:CDS
TGAGTACATTGAACAACTCT+TGG 0.400069 8_3:+56228474 Msa1296580:CDS
GCGATAGCTCAAATGATTCA+TGG 0.403105 8_3:+56228787 Msa1296580:CDS
GTTCTTCTTCATGTCATTGT+TGG 0.405061 8_3:+56228226 Msa1296580:CDS
TTTGTTGTTTAAGGTGGTGC+AGG 0.405236 8_3:+56229129 Msa1296580:three_prime_UTR
TGGTGTTATCTACATTGAAA+TGG 0.411519 8_3:+56228101 Msa1296580:CDS
TTCTGGTGGCTGTTATGTTA+TGG 0.413700 8_3:+56229003 Msa1296580:three_prime_UTR
GATTGAAGCTTTGTAGGAGA+TGG 0.416955 8_3:-56227543 None:intergenic
AGGAGATGGGTCGTTGGTAA+TGG 0.417318 8_3:-56227529 None:intergenic
CGTATCTGAACCAGGTAGTC+CGG 0.423092 8_3:+56228737 Msa1296580:CDS
GATTAATTGAAATCAGAAAC+AGG 0.425258 8_3:-56227126 None:intergenic
TTTGAAGAGCCGTTTGCATT+GGG 0.428112 8_3:+56228180 Msa1296580:CDS
GTTCAATCTCTTTAATTACA+TGG 0.432813 8_3:-56228438 None:intergenic
GCCAAACATTTGAAGATGAA+TGG 0.435014 8_3:+56229074 Msa1296580:three_prime_UTR
GTTTGAAGAGCCGTTTGCAT+TGG 0.436083 8_3:+56228179 Msa1296580:CDS
AAACAGGCTGTTTGCCGCCT+AGG 0.439213 8_3:-56227110 None:intergenic
AAAATGAACAGCAGAGAGAT+TGG 0.439244 8_3:-56229295 None:intergenic
TAGTAAAGGTAGAAAAGAAA+AGG 0.443131 8_3:+56227221 Msa1296580:five_prime_UTR
GTAGCAGCAGCCAATGTAGA+AGG 0.443163 8_3:-56228409 None:intergenic
CTCTGCTGTTCATGAAGTAT+AGG 0.443288 8_3:+56229333 Msa1296580:three_prime_UTR
AAAATCATCATTAATCAAAT+GGG 0.446028 8_3:-56227643 None:intergenic
CCAGCAGATGCGATTGCCTT+CGG 0.448229 8_3:+56228872 Msa1296580:CDS
GAGTTATCTTCCTTCTACAT+TGG 0.453122 8_3:+56228399 Msa1296580:CDS
GGTTGTTTCATTGTGAGAAA+GGG 0.453754 8_3:-56227401 None:intergenic
TTGAATGAGTCTCGTGTTGA+AGG 0.454018 8_3:+56227681 Msa1296580:CDS
CTCGTGTTGAAGGTGTGAAT+TGG 0.455681 8_3:+56227691 Msa1296580:CDS
AGGTTGTTTCATTGTGAGAA+AGG 0.455860 8_3:-56227402 None:intergenic
AGCTAAAACTATACAAAGAA+TGG 0.456932 8_3:+56228072 Msa1296580:CDS
CAAGAGATAATATTTGTCTT+GGG 0.459207 8_3:+56227065 None:intergenic
TACTAGTTTGAAGTTTCAAA+AGG 0.459874 8_3:+56227791 Msa1296580:CDS
TGGGTCGTTGGTAATGGTTT+CGG 0.460828 8_3:-56227523 None:intergenic
GTTTGCATTGGGAGTTTATG+TGG 0.461092 8_3:+56228191 Msa1296580:CDS
GAGTACATTGAACAACTCTT+GGG 0.474105 8_3:+56228475 Msa1296580:CDS
AAGAATGAAATTGGTGTCAC+TGG 0.474814 8_3:-56228133 None:intergenic
ATGGAGAAGATGAAGAGAAA+AGG 0.478077 8_3:-56227422 None:intergenic
GTGAGATTGAAGATGATGAA+TGG 0.479973 8_3:-56227281 None:intergenic
CAGAGAAAGGAAGGAGATAG+AGG 0.484038 8_3:-56227459 None:intergenic
AACAGGCTGTTTGCCGCCTA+GGG 0.485686 8_3:-56227109 None:intergenic
ACTGTTGTTGTCAGATTCAA+GGG 0.488226 8_3:+56228369 Msa1296580:intron
ATCCACTTTGTTGTTTAAGG+TGG 0.489760 8_3:+56229123 Msa1296580:three_prime_UTR
ACATAAACTCCCAATGCAAA+CGG 0.499623 8_3:-56228189 None:intergenic
AGTTTCAAAAGGATAAGCCT+TGG 0.509680 8_3:+56227802 Msa1296580:CDS
TGATAAGCAAATATAATCTC+AGG 0.514106 8_3:-56229259 None:intergenic
CCGAAGGCAATCGCATCTGC+TGG 0.515805 8_3:-56228872 None:intergenic
TGTTCTTCACAGAGAAAGGA+AGG 0.526108 8_3:-56227468 None:intergenic
GTTTATGTGGCGTTGTGAGA+AGG 0.526725 8_3:+56228204 Msa1296580:CDS
ATGACACCACCCGGACTACC+TGG 0.527412 8_3:-56228747 None:intergenic
TTGTTGTTTAAGGTGGTGCA+GGG 0.533062 8_3:+56229130 Msa1296580:three_prime_UTR
GAACACATTGTTAGAAGACT+TGG 0.535174 8_3:+56228157 Msa1296580:CDS
ATTGAAGCTTTGTAGGAGAT+GGG 0.535295 8_3:-56227542 None:intergenic
CACTGCAGCCGATGTTCAAG+AGG 0.536747 8_3:+56228835 Msa1296580:CDS
TTAAACAACAAAGTGGATGA+AGG 0.543730 8_3:-56229118 None:intergenic
GAGTGAGTAATGAAAACAAA+GGG 0.548729 8_3:-56227259 None:intergenic
TCTCTTTCACATAATTCTGG+TGG 0.561716 8_3:+56228989 Msa1296580:three_prime_UTR
CATTATTAAACAACAACCAT+AGG 0.565183 8_3:+56227172 Msa1296580:five_prime_UTR
TTCATGGACTGCAGCATCGT+CGG 0.565891 8_3:+56228803 Msa1296580:CDS
AATGGTTTCGGAATCGGTGA+GGG 0.567222 8_3:-56227511 None:intergenic
CGTAAGCGCGTATCTGAACC+AGG 0.577606 8_3:+56228729 Msa1296580:CDS
GTATCTGAACCAGGTAGTCC+GGG 0.579695 8_3:+56228738 Msa1296580:CDS
GCTCTGCTCCTCTTGAACAT+CGG 0.583132 8_3:-56228843 None:intergenic
CTTTGTAGGAGATGGGTCGT+TGG 0.583442 8_3:-56227535 None:intergenic
AACGCTCCATCTCCTTCCCT+AGG 0.586681 8_3:+56227093 Msa1296580:five_prime_UTR
ACTTGAAAATCCAAAAGAAG+TGG 0.586683 8_3:-56227888 None:intergenic
TTGCCGCCTAGGGAAGGAGA+TGG 0.591514 8_3:-56227099 None:intergenic
AATCCAAAAGAAGTGGCACA+TGG 0.596075 8_3:-56227881 None:intergenic
ATTTGAAGATGAATGGAATG+AGG 0.596504 8_3:+56229081 Msa1296580:three_prime_UTR
CACCACCTTAAACAACAAAG+TGG 0.597864 8_3:-56229125 None:intergenic
GGTGAGGGATTCATCTTCGA+AGG 0.608754 8_3:-56227496 None:intergenic
GGAGTGAGTAATGAAAACAA+AGG 0.621907 8_3:-56227260 None:intergenic
ATCCAAAAGAAGTGGCACAT+GGG 0.625549 8_3:-56227880 None:intergenic
AGATGAATGGAATGAGGCAG+AGG 0.625896 8_3:+56229087 Msa1296580:three_prime_UTR
GGGTTTACTAAAGATTAGTG+AGG 0.633483 8_3:+56228495 Msa1296580:CDS
TAATGGTTTCGGAATCGGTG+AGG 0.636416 8_3:-56227512 None:intergenic
GCAGCTGATAGATAACTCAC+AGG 0.637755 8_3:-56229197 None:intergenic
GCAGTAAGCTGAGTCATCCA+AGG 0.637891 8_3:-56227819 None:intergenic
ATCATCATCATTAATTAACG+AGG 0.639316 8_3:-56228927 None:intergenic
TCATCATCATTAATTAACGA+GGG 0.645108 8_3:-56228926 None:intergenic
TGTTATCTACATTGAAATGG+AGG 0.653096 8_3:+56228104 Msa1296580:CDS
GATGCATCAATGACACCACC+CGG 0.655887 8_3:-56228756 None:intergenic
ATAGACACACGATTAACCGA+AGG 0.692739 8_3:-56228888 None:intergenic
TCTGAACCAGGTAGTCCGGG+TGG 0.704205 8_3:+56228741 Msa1296580:CDS
GCTCCATCTCCTTCCCTAGG+CGG 0.718588 8_3:+56227096 Msa1296580:five_prime_UTR
GTAGTTGACAGCAAGAACAG+TGG 0.728516 8_3:-56227754 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATGTTTTTTTGTT+AGG + chr8_3:56228024-56228043 Msa1296580:intron 10.0%
!!! TTTTTTTATGTTTTTTTGTT+AGG + chr8_3:56228024-56228043 Msa1296580:intron 10.0%
!! AAAATCATCATTAATCAAAT+GGG - chr8_3:56227646-56227665 None:intergenic 15.0%
!! AAAATCATCATTAATCAAAT+GGG - chr8_3:56227646-56227665 None:intergenic 15.0%
!! AAAAAAGAAAAAATCACCTA+TGG - chr8_3:56227191-56227210 None:intergenic 20.0%
!!! TTTTTTGTTGAGAATAGTAA+AGG + chr8_3:56227207-56227226 Msa1296580:five_prime_UTR 20.0%
!!! AGTTTTTGTTTTTTTTTAGG+AGG - chr8_3:56227308-56227327 None:intergenic 20.0%
!!! TGGAGTTTTTGTTTTTTTTT+AGG - chr8_3:56227311-56227330 None:intergenic 20.0%
!! CAAAATCATCATTAATCAAA+TGG - chr8_3:56227647-56227666 None:intergenic 20.0%
!!! AATGATGATTTTGTTATTGA+TGG + chr8_3:56227654-56227673 Msa1296580:CDS 20.0%
!! CATCAAAAAACAAAACTTTA+TGG - chr8_3:56227949-56227968 None:intergenic 20.0%
!!! TTTTTGATGTTTTAAGTTGA+TGG + chr8_3:56227960-56227979 Msa1296580:intron 20.0%
!!! TTTTGATGTTTTAAGTTGAT+GGG + chr8_3:56227961-56227980 Msa1296580:intron 20.0%
!!! TAGTATTTTTACTTCAAATG+TGG + chr8_3:56228962-56228981 Msa1296580:three_prime_UTR 20.0%
!! TAACTAGAACATAATGTAAT+TGG - chr8_3:56229039-56229058 None:intergenic 20.0%
!! AAAAAAGAAAAAATCACCTA+TGG - chr8_3:56227191-56227210 None:intergenic 20.0%
!!! TTTTTTGTTGAGAATAGTAA+AGG + chr8_3:56227207-56227226 Msa1296580:five_prime_UTR 20.0%
!!! AGTTTTTGTTTTTTTTTAGG+AGG - chr8_3:56227308-56227327 None:intergenic 20.0%
!!! TGGAGTTTTTGTTTTTTTTT+AGG - chr8_3:56227311-56227330 None:intergenic 20.0%
!! CAAAATCATCATTAATCAAA+TGG - chr8_3:56227647-56227666 None:intergenic 20.0%
!!! AATGATGATTTTGTTATTGA+TGG + chr8_3:56227654-56227673 Msa1296580:CDS 20.0%
!! CATCAAAAAACAAAACTTTA+TGG - chr8_3:56227949-56227968 None:intergenic 20.0%
!!! TTTTTGATGTTTTAAGTTGA+TGG + chr8_3:56227960-56227979 Msa1296580:intron 20.0%
!!! TTTTGATGTTTTAAGTTGAT+GGG + chr8_3:56227961-56227980 Msa1296580:intron 20.0%
!!! TAGTATTTTTACTTCAAATG+TGG + chr8_3:56228962-56228981 Msa1296580:three_prime_UTR 20.0%
!! TAACTAGAACATAATGTAAT+TGG - chr8_3:56229039-56229058 None:intergenic 20.0%
! GATTAATTGAAATCAGAAAC+AGG - chr8_3:56227129-56227148 None:intergenic 25.0%
! CATTATTAAACAACAACCAT+AGG + chr8_3:56227172-56227191 Msa1296580:five_prime_UTR 25.0%
! TAGTAAAGGTAGAAAAGAAA+AGG + chr8_3:56227221-56227240 Msa1296580:five_prime_UTR 25.0%
!! TGTTCAACAATGATATGTTT+TGG + chr8_3:56227577-56227596 Msa1296580:CDS 25.0%
!! GTTCAACAATGATATGTTTT+GGG + chr8_3:56227578-56227597 Msa1296580:CDS 25.0%
!! TACTAGTTTGAAGTTTCAAA+AGG + chr8_3:56227791-56227810 Msa1296580:CDS 25.0%
!!! TATGTTTTTTTGTTAGGTTG+AGG + chr8_3:56228030-56228049 Msa1296580:intron 25.0%
! AGCTAAAACTATACAAAGAA+TGG + chr8_3:56228072-56228091 Msa1296580:CDS 25.0%
! ATGTGTTCAAAGAATGAAAT+TGG - chr8_3:56228145-56228164 None:intergenic 25.0%
! TAATAAATATGATACTGTGC+TGG + chr8_3:56228279-56228298 Msa1296580:intron 25.0%
!!! ATAAGTACCATTAGTCTTAA+TGG - chr8_3:56228335-56228354 None:intergenic 25.0%
! GTTCAATCTCTTTAATTACA+TGG - chr8_3:56228441-56228460 None:intergenic 25.0%
! AACAATTATTGACAATGTAG+AGG - chr8_3:56228548-56228567 None:intergenic 25.0%
! ATAAGTGAAATGACTAAGTT+TGG + chr8_3:56228601-56228620 Msa1296580:intron 25.0%
!!! AAGTTATTAGTTTGCAATGA+TGG + chr8_3:56228684-56228703 Msa1296580:CDS 25.0%
! TCATCATCATTAATTAACGA+GGG - chr8_3:56228929-56228948 None:intergenic 25.0%
! ATCATCATCATTAATTAACG+AGG - chr8_3:56228930-56228949 None:intergenic 25.0%
! TGATAAGCAAATATAATCTC+AGG - chr8_3:56229262-56229281 None:intergenic 25.0%
! GATTAATTGAAATCAGAAAC+AGG - chr8_3:56227129-56227148 None:intergenic 25.0%
! CATTATTAAACAACAACCAT+AGG + chr8_3:56227172-56227191 Msa1296580:five_prime_UTR 25.0%
! TAGTAAAGGTAGAAAAGAAA+AGG + chr8_3:56227221-56227240 Msa1296580:five_prime_UTR 25.0%
!! TGTTCAACAATGATATGTTT+TGG + chr8_3:56227577-56227596 Msa1296580:CDS 25.0%
!! GTTCAACAATGATATGTTTT+GGG + chr8_3:56227578-56227597 Msa1296580:CDS 25.0%
!! TACTAGTTTGAAGTTTCAAA+AGG + chr8_3:56227791-56227810 Msa1296580:CDS 25.0%
!!! TATGTTTTTTTGTTAGGTTG+AGG + chr8_3:56228030-56228049 Msa1296580:intron 25.0%
! AGCTAAAACTATACAAAGAA+TGG + chr8_3:56228072-56228091 Msa1296580:CDS 25.0%
! ATGTGTTCAAAGAATGAAAT+TGG - chr8_3:56228145-56228164 None:intergenic 25.0%
! TAATAAATATGATACTGTGC+TGG + chr8_3:56228279-56228298 Msa1296580:intron 25.0%
!!! ATAAGTACCATTAGTCTTAA+TGG - chr8_3:56228335-56228354 None:intergenic 25.0%
! GTTCAATCTCTTTAATTACA+TGG - chr8_3:56228441-56228460 None:intergenic 25.0%
! AACAATTATTGACAATGTAG+AGG - chr8_3:56228548-56228567 None:intergenic 25.0%
! ATAAGTGAAATGACTAAGTT+TGG + chr8_3:56228601-56228620 Msa1296580:intron 25.0%
!!! AAGTTATTAGTTTGCAATGA+TGG + chr8_3:56228684-56228703 Msa1296580:CDS 25.0%
! TCATCATCATTAATTAACGA+GGG - chr8_3:56228929-56228948 None:intergenic 25.0%
! ATCATCATCATTAATTAACG+AGG - chr8_3:56228930-56228949 None:intergenic 25.0%
! TGATAAGCAAATATAATCTC+AGG - chr8_3:56229262-56229281 None:intergenic 25.0%
GAGTGAGTAATGAAAACAAA+GGG - chr8_3:56227262-56227281 None:intergenic 30.0%
!!! TGTTTGTTTTTTTCTCTCAC+TGG - chr8_3:56227331-56227350 None:intergenic 30.0%
! GATAAAGATTGAAGCTTTGT+AGG - chr8_3:56227552-56227571 None:intergenic 30.0%
ACTTGAAAATCCAAAAGAAG+TGG - chr8_3:56227891-56227910 None:intergenic 30.0%
! TATACAAAGAATGGAGCTTT+TGG + chr8_3:56228081-56228100 Msa1296580:CDS 30.0%
!! TGGTGTTATCTACATTGAAA+TGG + chr8_3:56228101-56228120 Msa1296580:CDS 30.0%
TGTTATCTACATTGAAATGG+AGG + chr8_3:56228104-56228123 Msa1296580:CDS 30.0%
ATGTACTCAGTTGCATTAAA+TGG - chr8_3:56228463-56228482 None:intergenic 30.0%
! TGAATTTTCCAAATCTGATG+CGG + chr8_3:56228567-56228586 Msa1296580:intron 30.0%
!! TGGTGATGATTTGATTTTAC+AGG + chr8_3:56228629-56228648 Msa1296580:intron 30.0%
TCCATTCATCTTCAAATGTT+TGG - chr8_3:56229078-56229097 None:intergenic 30.0%
ATTTGAAGATGAATGGAATG+AGG + chr8_3:56229081-56229100 Msa1296580:three_prime_UTR 30.0%
TTAAACAACAAAGTGGATGA+AGG - chr8_3:56229121-56229140 None:intergenic 30.0%
!! TTCATCCACTTTGTTGTTTA+AGG + chr8_3:56229120-56229139 Msa1296580:three_prime_UTR 30.0%
GAGTGAGTAATGAAAACAAA+GGG - chr8_3:56227262-56227281 None:intergenic 30.0%
!!! TGTTTGTTTTTTTCTCTCAC+TGG - chr8_3:56227331-56227350 None:intergenic 30.0%
! GATAAAGATTGAAGCTTTGT+AGG - chr8_3:56227552-56227571 None:intergenic 30.0%
ACTTGAAAATCCAAAAGAAG+TGG - chr8_3:56227891-56227910 None:intergenic 30.0%
! TATACAAAGAATGGAGCTTT+TGG + chr8_3:56228081-56228100 Msa1296580:CDS 30.0%
!! TGGTGTTATCTACATTGAAA+TGG + chr8_3:56228101-56228120 Msa1296580:CDS 30.0%
TGTTATCTACATTGAAATGG+AGG + chr8_3:56228104-56228123 Msa1296580:CDS 30.0%
ATGTACTCAGTTGCATTAAA+TGG - chr8_3:56228463-56228482 None:intergenic 30.0%
! TGAATTTTCCAAATCTGATG+CGG + chr8_3:56228567-56228586 Msa1296580:intron 30.0%
!! TGGTGATGATTTGATTTTAC+AGG + chr8_3:56228629-56228648 Msa1296580:intron 30.0%
TCCATTCATCTTCAAATGTT+TGG - chr8_3:56229078-56229097 None:intergenic 30.0%
ATTTGAAGATGAATGGAATG+AGG + chr8_3:56229081-56229100 Msa1296580:three_prime_UTR 30.0%
TTAAACAACAAAGTGGATGA+AGG - chr8_3:56229121-56229140 None:intergenic 30.0%
!! TTCATCCACTTTGTTGTTTA+AGG + chr8_3:56229120-56229139 Msa1296580:three_prime_UTR 30.0%
GGAGTGAGTAATGAAAACAA+AGG - chr8_3:56227263-56227282 None:intergenic 35.0%
GTGAGATTGAAGATGATGAA+TGG - chr8_3:56227284-56227303 None:intergenic 35.0%
! GGTTGTTTCATTGTGAGAAA+GGG - chr8_3:56227404-56227423 None:intergenic 35.0%
! AGGTTGTTTCATTGTGAGAA+AGG - chr8_3:56227405-56227424 None:intergenic 35.0%
ATGGAGAAGATGAAGAGAAA+AGG - chr8_3:56227425-56227444 None:intergenic 35.0%
!! GTTTTGTTCTTCACAGAGAA+AGG - chr8_3:56227475-56227494 None:intergenic 35.0%
! ATTGAAGCTTTGTAGGAGAT+GGG - chr8_3:56227545-56227564 None:intergenic 35.0%
! TCTAGAGTTTGTGCTCATTA+TGG + chr8_3:56227717-56227736 Msa1296580:CDS 35.0%
CTAGAGTTTGTGCTCATTAT+GGG + chr8_3:56227718-56227737 Msa1296580:CDS 35.0%
AGTTTCAAAAGGATAAGCCT+TGG + chr8_3:56227802-56227821 Msa1296580:CDS 35.0%
!! AAGAATGAAATTGGTGTCAC+TGG - chr8_3:56228136-56228155 None:intergenic 35.0%
GAACACATTGTTAGAAGACT+TGG + chr8_3:56228157-56228176 Msa1296580:CDS 35.0%
ACATAAACTCCCAATGCAAA+CGG - chr8_3:56228192-56228211 None:intergenic 35.0%
GTTCTTCTTCATGTCATTGT+TGG + chr8_3:56228226-56228245 Msa1296580:CDS 35.0%
AGACATGCCATTAAGACTAA+TGG + chr8_3:56228325-56228344 Msa1296580:intron 35.0%
ACTGTTGTTGTCAGATTCAA+GGG + chr8_3:56228369-56228388 Msa1296580:intron 35.0%
GAGTTATCTTCCTTCTACAT+TGG + chr8_3:56228399-56228418 Msa1296580:CDS 35.0%
TGAGTACATTGAACAACTCT+TGG + chr8_3:56228474-56228493 Msa1296580:CDS 35.0%
GAGTACATTGAACAACTCTT+GGG + chr8_3:56228475-56228494 Msa1296580:CDS 35.0%
GGGTTTACTAAAGATTAGTG+AGG + chr8_3:56228495-56228514 Msa1296580:CDS 35.0%
! GAATTTTCCAAATCTGATGC+GGG + chr8_3:56228568-56228587 Msa1296580:intron 35.0%
!! AATGACTAAGTTTGGTGTCT+TGG + chr8_3:56228609-56228628 Msa1296580:intron 35.0%
AGCTCTCTTTCACATAATTC+TGG + chr8_3:56228986-56229005 Msa1296580:three_prime_UTR 35.0%
TCTCTTTCACATAATTCTGG+TGG + chr8_3:56228989-56229008 Msa1296580:three_prime_UTR 35.0%
GCCAAACATTTGAAGATGAA+TGG + chr8_3:56229074-56229093 Msa1296580:three_prime_UTR 35.0%
!! ATCCACTTTGTTGTTTAAGG+TGG + chr8_3:56229123-56229142 Msa1296580:three_prime_UTR 35.0%
AAAATGAACAGCAGAGAGAT+TGG - chr8_3:56229298-56229317 None:intergenic 35.0%
!!! CTCTCTGCTGTTCATTTTTT+TGG + chr8_3:56229300-56229319 Msa1296580:three_prime_UTR 35.0%
GGAGTGAGTAATGAAAACAA+AGG - chr8_3:56227263-56227282 None:intergenic 35.0%
GTGAGATTGAAGATGATGAA+TGG - chr8_3:56227284-56227303 None:intergenic 35.0%
! GGTTGTTTCATTGTGAGAAA+GGG - chr8_3:56227404-56227423 None:intergenic 35.0%
! AGGTTGTTTCATTGTGAGAA+AGG - chr8_3:56227405-56227424 None:intergenic 35.0%
ATGGAGAAGATGAAGAGAAA+AGG - chr8_3:56227425-56227444 None:intergenic 35.0%
!! GTTTTGTTCTTCACAGAGAA+AGG - chr8_3:56227475-56227494 None:intergenic 35.0%
! ATTGAAGCTTTGTAGGAGAT+GGG - chr8_3:56227545-56227564 None:intergenic 35.0%
! TCTAGAGTTTGTGCTCATTA+TGG + chr8_3:56227717-56227736 Msa1296580:CDS 35.0%
CTAGAGTTTGTGCTCATTAT+GGG + chr8_3:56227718-56227737 Msa1296580:CDS 35.0%
AGTTTCAAAAGGATAAGCCT+TGG + chr8_3:56227802-56227821 Msa1296580:CDS 35.0%
!! AAGAATGAAATTGGTGTCAC+TGG - chr8_3:56228136-56228155 None:intergenic 35.0%
GAACACATTGTTAGAAGACT+TGG + chr8_3:56228157-56228176 Msa1296580:CDS 35.0%
ACATAAACTCCCAATGCAAA+CGG - chr8_3:56228192-56228211 None:intergenic 35.0%
GTTCTTCTTCATGTCATTGT+TGG + chr8_3:56228226-56228245 Msa1296580:CDS 35.0%
AGACATGCCATTAAGACTAA+TGG + chr8_3:56228325-56228344 Msa1296580:intron 35.0%
ACTGTTGTTGTCAGATTCAA+GGG + chr8_3:56228369-56228388 Msa1296580:intron 35.0%
GAGTTATCTTCCTTCTACAT+TGG + chr8_3:56228399-56228418 Msa1296580:CDS 35.0%
TGAGTACATTGAACAACTCT+TGG + chr8_3:56228474-56228493 Msa1296580:CDS 35.0%
GAGTACATTGAACAACTCTT+GGG + chr8_3:56228475-56228494 Msa1296580:CDS 35.0%
GGGTTTACTAAAGATTAGTG+AGG + chr8_3:56228495-56228514 Msa1296580:CDS 35.0%
! GAATTTTCCAAATCTGATGC+GGG + chr8_3:56228568-56228587 Msa1296580:intron 35.0%
!! AATGACTAAGTTTGGTGTCT+TGG + chr8_3:56228609-56228628 Msa1296580:intron 35.0%
AGCTCTCTTTCACATAATTC+TGG + chr8_3:56228986-56229005 Msa1296580:three_prime_UTR 35.0%
TCTCTTTCACATAATTCTGG+TGG + chr8_3:56228989-56229008 Msa1296580:three_prime_UTR 35.0%
GCCAAACATTTGAAGATGAA+TGG + chr8_3:56229074-56229093 Msa1296580:three_prime_UTR 35.0%
!! ATCCACTTTGTTGTTTAAGG+TGG + chr8_3:56229123-56229142 Msa1296580:three_prime_UTR 35.0%
AAAATGAACAGCAGAGAGAT+TGG - chr8_3:56229298-56229317 None:intergenic 35.0%
!!! CTCTCTGCTGTTCATTTTTT+TGG + chr8_3:56229300-56229319 Msa1296580:three_prime_UTR 35.0%
ATTGTGAGAAAGGGAGAGAA+AGG - chr8_3:56227395-56227414 None:intergenic 40.0%
AGAGGTTGAGACATCTTCTA+TGG - chr8_3:56227444-56227463 None:intergenic 40.0%
TGTTCTTCACAGAGAAAGGA+AGG - chr8_3:56227471-56227490 None:intergenic 40.0%
!! GTTGGTAATGGTTTCGGAAT+CGG - chr8_3:56227520-56227539 None:intergenic 40.0%
! GATTGAAGCTTTGTAGGAGA+TGG - chr8_3:56227546-56227565 None:intergenic 40.0%
TTGAATGAGTCTCGTGTTGA+AGG + chr8_3:56227681-56227700 Msa1296580:CDS 40.0%
ATCCAAAAGAAGTGGCACAT+GGG - chr8_3:56227883-56227902 None:intergenic 40.0%
AATCCAAAAGAAGTGGCACA+TGG - chr8_3:56227884-56227903 None:intergenic 40.0%
TTTGAAGAGCCGTTTGCATT+GGG + chr8_3:56228180-56228199 Msa1296580:CDS 40.0%
GTTTGCATTGGGAGTTTATG+TGG + chr8_3:56228191-56228210 Msa1296580:CDS 40.0%
CACTGTTGTTGTCAGATTCA+AGG + chr8_3:56228368-56228387 Msa1296580:intron 40.0%
GCGATAGCTCAAATGATTCA+TGG + chr8_3:56228787-56228806 Msa1296580:CDS 40.0%
ATAGACACACGATTAACCGA+AGG - chr8_3:56228891-56228910 None:intergenic 40.0%
TTCTGGTGGCTGTTATGTTA+TGG + chr8_3:56229003-56229022 Msa1296580:three_prime_UTR 40.0%
CACCACCTTAAACAACAAAG+TGG - chr8_3:56229128-56229147 None:intergenic 40.0%
!! TTTGTTGTTTAAGGTGGTGC+AGG + chr8_3:56229129-56229148 Msa1296580:three_prime_UTR 40.0%
!! TTGTTGTTTAAGGTGGTGCA+GGG + chr8_3:56229130-56229149 Msa1296580:three_prime_UTR 40.0%
ATTGTGAGAAAGGGAGAGAA+AGG - chr8_3:56227395-56227414 None:intergenic 40.0%
AGAGGTTGAGACATCTTCTA+TGG - chr8_3:56227444-56227463 None:intergenic 40.0%
TGTTCTTCACAGAGAAAGGA+AGG - chr8_3:56227471-56227490 None:intergenic 40.0%
!! GTTGGTAATGGTTTCGGAAT+CGG - chr8_3:56227520-56227539 None:intergenic 40.0%
! GATTGAAGCTTTGTAGGAGA+TGG - chr8_3:56227546-56227565 None:intergenic 40.0%
TTGAATGAGTCTCGTGTTGA+AGG + chr8_3:56227681-56227700 Msa1296580:CDS 40.0%
ATCCAAAAGAAGTGGCACAT+GGG - chr8_3:56227883-56227902 None:intergenic 40.0%
AATCCAAAAGAAGTGGCACA+TGG - chr8_3:56227884-56227903 None:intergenic 40.0%
TTTGAAGAGCCGTTTGCATT+GGG + chr8_3:56228180-56228199 Msa1296580:CDS 40.0%
GTTTGCATTGGGAGTTTATG+TGG + chr8_3:56228191-56228210 Msa1296580:CDS 40.0%
CACTGTTGTTGTCAGATTCA+AGG + chr8_3:56228368-56228387 Msa1296580:intron 40.0%
GCGATAGCTCAAATGATTCA+TGG + chr8_3:56228787-56228806 Msa1296580:CDS 40.0%
ATAGACACACGATTAACCGA+AGG - chr8_3:56228891-56228910 None:intergenic 40.0%
TTCTGGTGGCTGTTATGTTA+TGG + chr8_3:56229003-56229022 Msa1296580:three_prime_UTR 40.0%
CACCACCTTAAACAACAAAG+TGG - chr8_3:56229128-56229147 None:intergenic 40.0%
!! TTTGTTGTTTAAGGTGGTGC+AGG + chr8_3:56229129-56229148 Msa1296580:three_prime_UTR 40.0%
!! TTGTTGTTTAAGGTGGTGCA+GGG + chr8_3:56229130-56229149 Msa1296580:three_prime_UTR 40.0%
CAGAGAAAGGAAGGAGATAG+AGG - chr8_3:56227462-56227481 None:intergenic 45.0%
AATGGTTTCGGAATCGGTGA+GGG - chr8_3:56227514-56227533 None:intergenic 45.0%
TAATGGTTTCGGAATCGGTG+AGG - chr8_3:56227515-56227534 None:intergenic 45.0%
!! TGGGTCGTTGGTAATGGTTT+CGG - chr8_3:56227526-56227545 None:intergenic 45.0%
! CTCGTGTTGAAGGTGTGAAT+TGG + chr8_3:56227691-56227710 Msa1296580:CDS 45.0%
GTAGTTGACAGCAAGAACAG+TGG - chr8_3:56227757-56227776 None:intergenic 45.0%
!!! AACCCATGTGCCACTTCTTT+TGG + chr8_3:56227878-56227897 Msa1296580:CDS 45.0%
GTTTGAAGAGCCGTTTGCAT+TGG + chr8_3:56228179-56228198 Msa1296580:CDS 45.0%
GTTTATGTGGCGTTGTGAGA+AGG + chr8_3:56228204-56228223 Msa1296580:CDS 45.0%
CATCAAACCCGCATCAGATT+TGG - chr8_3:56228578-56228597 None:intergenic 45.0%
CAAATCTGATGCGGGTTTGA+TGG + chr8_3:56228576-56228595 Msa1296580:intron 45.0%
AGATGAATGGAATGAGGCAG+AGG + chr8_3:56229087-56229106 Msa1296580:three_prime_UTR 45.0%
GCAGCTGATAGATAACTCAC+AGG - chr8_3:56229200-56229219 None:intergenic 45.0%
CAGAGAAAGGAAGGAGATAG+AGG - chr8_3:56227462-56227481 None:intergenic 45.0%
AATGGTTTCGGAATCGGTGA+GGG - chr8_3:56227514-56227533 None:intergenic 45.0%
TAATGGTTTCGGAATCGGTG+AGG - chr8_3:56227515-56227534 None:intergenic 45.0%
!! TGGGTCGTTGGTAATGGTTT+CGG - chr8_3:56227526-56227545 None:intergenic 45.0%
! CTCGTGTTGAAGGTGTGAAT+TGG + chr8_3:56227691-56227710 Msa1296580:CDS 45.0%
GTAGTTGACAGCAAGAACAG+TGG - chr8_3:56227757-56227776 None:intergenic 45.0%
!!! AACCCATGTGCCACTTCTTT+TGG + chr8_3:56227878-56227897 Msa1296580:CDS 45.0%
GTTTGAAGAGCCGTTTGCAT+TGG + chr8_3:56228179-56228198 Msa1296580:CDS 45.0%
GTTTATGTGGCGTTGTGAGA+AGG + chr8_3:56228204-56228223 Msa1296580:CDS 45.0%
CATCAAACCCGCATCAGATT+TGG - chr8_3:56228578-56228597 None:intergenic 45.0%
CAAATCTGATGCGGGTTTGA+TGG + chr8_3:56228576-56228595 Msa1296580:intron 45.0%
AGATGAATGGAATGAGGCAG+AGG + chr8_3:56229087-56229106 Msa1296580:three_prime_UTR 45.0%
GCAGCTGATAGATAACTCAC+AGG - chr8_3:56229200-56229219 None:intergenic 45.0%
! GGAAGGAGATGGAGCGTTTA+CGG - chr8_3:56227091-56227110 None:intergenic 50.0%
GGTGAGGGATTCATCTTCGA+AGG - chr8_3:56227499-56227518 None:intergenic 50.0%
! AGGAGATGGGTCGTTGGTAA+TGG - chr8_3:56227532-56227551 None:intergenic 50.0%
CTTTGTAGGAGATGGGTCGT+TGG - chr8_3:56227538-56227557 None:intergenic 50.0%
GCAGTAAGCTGAGTCATCCA+AGG - chr8_3:56227822-56227841 None:intergenic 50.0%
GTAGCAGCAGCCAATGTAGA+AGG - chr8_3:56228412-56228431 None:intergenic 50.0%
CAGATACGCGCTTACGTTTC+TGG - chr8_3:56228725-56228744 None:intergenic 50.0%
CGTATCTGAACCAGGTAGTC+CGG + chr8_3:56228737-56228756 Msa1296580:CDS 50.0%
GTATCTGAACCAGGTAGTCC+GGG + chr8_3:56228738-56228757 Msa1296580:CDS 50.0%
GATGCATCAATGACACCACC+CGG - chr8_3:56228759-56228778 None:intergenic 50.0%
! TTCATGGACTGCAGCATCGT+CGG + chr8_3:56228803-56228822 Msa1296580:CDS 50.0%
GCTCTGCTCCTCTTGAACAT+CGG - chr8_3:56228846-56228865 None:intergenic 50.0%
! GGAAGGAGATGGAGCGTTTA+CGG - chr8_3:56227091-56227110 None:intergenic 50.0%
GGTGAGGGATTCATCTTCGA+AGG - chr8_3:56227499-56227518 None:intergenic 50.0%
! AGGAGATGGGTCGTTGGTAA+TGG - chr8_3:56227532-56227551 None:intergenic 50.0%
CTTTGTAGGAGATGGGTCGT+TGG - chr8_3:56227538-56227557 None:intergenic 50.0%
GCAGTAAGCTGAGTCATCCA+AGG - chr8_3:56227822-56227841 None:intergenic 50.0%
GTAGCAGCAGCCAATGTAGA+AGG - chr8_3:56228412-56228431 None:intergenic 50.0%
CAGATACGCGCTTACGTTTC+TGG - chr8_3:56228725-56228744 None:intergenic 50.0%
CGTATCTGAACCAGGTAGTC+CGG + chr8_3:56228737-56228756 Msa1296580:CDS 50.0%
GTATCTGAACCAGGTAGTCC+GGG + chr8_3:56228738-56228757 Msa1296580:CDS 50.0%
GATGCATCAATGACACCACC+CGG - chr8_3:56228759-56228778 None:intergenic 50.0%
! TTCATGGACTGCAGCATCGT+CGG + chr8_3:56228803-56228822 Msa1296580:CDS 50.0%
GCTCTGCTCCTCTTGAACAT+CGG - chr8_3:56228846-56228865 None:intergenic 50.0%
AACGCTCCATCTCCTTCCCT+AGG + chr8_3:56227093-56227112 Msa1296580:five_prime_UTR 55.0%
AACAGGCTGTTTGCCGCCTA+GGG - chr8_3:56227112-56227131 None:intergenic 55.0%
AAACAGGCTGTTTGCCGCCT+AGG - chr8_3:56227113-56227132 None:intergenic 55.0%
CGTAAGCGCGTATCTGAACC+AGG + chr8_3:56228729-56228748 Msa1296580:CDS 55.0%
CACTGCAGCCGATGTTCAAG+AGG + chr8_3:56228835-56228854 Msa1296580:CDS 55.0%
CCAGCAGATGCGATTGCCTT+CGG + chr8_3:56228872-56228891 Msa1296580:CDS 55.0%
AACGCTCCATCTCCTTCCCT+AGG + chr8_3:56227093-56227112 Msa1296580:five_prime_UTR 55.0%
AACAGGCTGTTTGCCGCCTA+GGG - chr8_3:56227112-56227131 None:intergenic 55.0%
AAACAGGCTGTTTGCCGCCT+AGG - chr8_3:56227113-56227132 None:intergenic 55.0%
CGTAAGCGCGTATCTGAACC+AGG + chr8_3:56228729-56228748 Msa1296580:CDS 55.0%
CACTGCAGCCGATGTTCAAG+AGG + chr8_3:56228835-56228854 Msa1296580:CDS 55.0%
CCAGCAGATGCGATTGCCTT+CGG + chr8_3:56228872-56228891 Msa1296580:CDS 55.0%
GCTCCATCTCCTTCCCTAGG+CGG + chr8_3:56227096-56227115 Msa1296580:five_prime_UTR 60.0%
TTGCCGCCTAGGGAAGGAGA+TGG - chr8_3:56227102-56227121 None:intergenic 60.0%
TCTGAACCAGGTAGTCCGGG+TGG + chr8_3:56228741-56228760 Msa1296580:CDS 60.0%
ATGACACCACCCGGACTACC+TGG - chr8_3:56228750-56228769 None:intergenic 60.0%
CCGAAGGCAATCGCATCTGC+TGG - chr8_3:56228875-56228894 None:intergenic 60.0%
GCTCCATCTCCTTCCCTAGG+CGG + chr8_3:56227096-56227115 Msa1296580:five_prime_UTR 60.0%
TTGCCGCCTAGGGAAGGAGA+TGG - chr8_3:56227102-56227121 None:intergenic 60.0%
TCTGAACCAGGTAGTCCGGG+TGG + chr8_3:56228741-56228760 Msa1296580:CDS 60.0%
ATGACACCACCCGGACTACC+TGG - chr8_3:56228750-56228769 None:intergenic 60.0%
CCGAAGGCAATCGCATCTGC+TGG - chr8_3:56228875-56228894 None:intergenic 60.0%
GGCTGTTTGCCGCCTAGGGA+AGG - chr8_3:56227108-56227127 None:intergenic 65.0%
GGCTGTTTGCCGCCTAGGGA+AGG - chr8_3:56227108-56227127 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 56227080 56229353 56227080 ID=Msa1296580;Name=Msa1296580
chr8_3 mRNA 56227080 56229353 56227080 ID=Msa1296580-mRNA-1;Parent=Msa1296580;Name=Msa1296580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=370|1|1|1|1|1|4|418|359
chr8_3 exon 56227080 56227908 56227080 ID=Msa1296580-mRNA-1:exon:16104;Parent=Msa1296580-mRNA-1
chr8_3 exon 56228046 56228247 56228046 ID=Msa1296580-mRNA-1:exon:16105;Parent=Msa1296580-mRNA-1
chr8_3 exon 56228383 56228516 56228383 ID=Msa1296580-mRNA-1:exon:16106;Parent=Msa1296580-mRNA-1
chr8_3 exon 56228651 56229353 56228651 ID=Msa1296580-mRNA-1:exon:16107;Parent=Msa1296580-mRNA-1
chr8_3 five_prime_UTR 56227080 56227449 56227080 ID=Msa1296580-mRNA-1:five_prime_utr;Parent=Msa1296580-mRNA-1
chr8_3 CDS 56227450 56227908 56227450 ID=Msa1296580-mRNA-1:cds;Parent=Msa1296580-mRNA-1
chr8_3 CDS 56228046 56228247 56228046 ID=Msa1296580-mRNA-1:cds;Parent=Msa1296580-mRNA-1
chr8_3 CDS 56228383 56228516 56228383 ID=Msa1296580-mRNA-1:cds;Parent=Msa1296580-mRNA-1
chr8_3 CDS 56228651 56228935 56228651 ID=Msa1296580-mRNA-1:cds;Parent=Msa1296580-mRNA-1
chr8_3 three_prime_UTR 56228936 56229353 56228936 ID=Msa1296580-mRNA-1:three_prime_utr;Parent=Msa1296580-mRNA-1
Gene Sequence

>Msa1296580

ATGTCTCAACCTCTATCTCCTTCCTTTCTCTGTGAAGAACAAAACACCTTCGAAGATGAATCCCTCACCGATTCCGAAACCATTACCAACGACCCATCTCCTACAAAGCTTCAATCTTTATCGAATTTGTTCAACAATGATATGTTTTGGGAAGACGATGAAGTTCTTTCGTTAATCATGAAAGAGAAAGAAACCCATTTGATTAATGATGATTTTGTTATTGATGGATCTTTGAATGAGTCTCGTGTTGAAGGTGTGAATTGGCTTTCTAGAGTTTGTGCTCATTATGGGTTTTCTACTTTGACCACTGTTCTTGCTGTCAACTACTTTGATAGATTCGTTACTAGTTTGAAGTTTCAAAAGGATAAGCCTTGGATGACTCAGCTTACTGCTGTTGCTTGTTTGTCTCTTGCTGCTAAAATTGAAGAAACCCATGTGCCACTTCTTTTGGATTTTCAAGTTGAGGAATCTAGATTTGTGTTTGAAGCTAAAACTATACAAAGAATGGAGCTTTTGGTGTTATCTACATTGAAATGGAGGATGCATCCAGTGACACCAATTTCATTCTTTGAACACATTGTTAGAAGACTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAAGGTTCTTCTTCATGTCATTGTTGATTCAAGGGTTATGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTAATTAAAGAGATTGAACCATTTAATGCAACTGAGTACATTGAACAACTCTTGGGTTTACTAAAGATTAGTGAGGAACAAGTGAATCAGTGCTACAAACTTATGCTGAAGTTATTAGTTTGCAATGATGGCATTTACAGTCTTCACCAGAAACGTAAGCGCGTATCTGAACCAGGTAGTCCGGGTGGTGTCATTGATGCATCTTTCAGCTGCGATAGCTCAAATGATTCATGGACTGCAGCATCGTCGGTTTCACTTTCACTGCAGCCGATGTTCAAGAGGAGCAGAGCTCAAGACCAGCAGATGCGATTGCCTTCGGTTAATCGTGTGTCTATTGATGTTCTTCATAGCCCTCGTTAA
Protein sequence

>Msa1296580

MSQPLSPSFLCEEQNTFEDESLTDSETITNDPSPTKLQSLSNLFNNDMFWEDDEVLSLIMKEKETHLINDDFVIDGSLNESRVEGVNWLSRVCAHYGFSTLTTVLAVNYFDRFVTSLKFQKDKPWMTQLTAVACLSLAAKIEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFMWRCEKVLLHVIVDSRVMMSYLPSTLAAATMIHVIKEIEPFNATEYIEQLLGLLKISEEQVNQCYKLMLKLLVCNDGIYSLHQKRKRVSEPGSPGGVIDASFSCDSSNDSWTAASSVSLSLQPMFKRSRAQDQQMRLPSVNRVSIDVLHSPR*