AlfalfaGEDB | Msa1196100

M. sativa cultivar zhongmu-4 / Msa1196100

KEGG: K14505
GO: GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009987 GO:0010154 GO:0010374 GO:0010440 GO:0010444 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0090558 GO:0090627
PFAM: PF00134.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1196100	XP_013457455.1	98.050	359	7	0	1	359	1	359	0.0	726

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1196100	sp\|Q9FGQ7\|CCD32_ARATH	51.389	360	149	8	11	359	23	367	8.65e-113	335

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1196100	A0A072UQ65	98.050	359	7	0	1	359	1	359	0.0	726

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000330	Msa1196100	0.856732	2.637190e-62	-8.615850e-47
Msa0016670	Msa1196100	0.802555	5.305919e-49	-8.615850e-47
Msa0036850	Msa1196100	0.836993	6.754936e-57	-8.615850e-47
Msa0039790	Msa1196100	0.810366	1.194902e-50	-8.615850e-47
Msa0115160	Msa1196100	0.807647	4.564796e-50	-8.615850e-47
Msa0609450	Msa1196100	0.804341	2.262917e-49	-8.615850e-47
Msa0620990	Msa1196100	0.832348	9.953113e-56	-8.615850e-47
Msa0650090	Msa1196100	0.807163	5.780397e-50	-8.615850e-47
Msa0663300	Msa1196100	0.804003	2.661121e-49	-8.615850e-47
Msa0683570	Msa1196100	0.809209	2.119238e-50	-8.615850e-47
Msa0687460	Msa1196100	0.809317	2.008761e-50	-8.615850e-47
Msa0692080	Msa1196100	0.803225	3.858020e-49	-8.615850e-47
Msa0709780	Msa1196100	0.811552	6.611187e-51	-8.615850e-47
Msa0759650	Msa1196100	0.805612	1.227497e-49	-8.615850e-47
Msa0134180	Msa1196100	0.835015	2.145714e-56	-8.615850e-47
Msa0180930	Msa1196100	0.836970	6.845603e-57	-8.615850e-47
Msa0434920	Msa1196100	0.835419	1.696453e-56	-8.615850e-47
Msa0478870	Msa1196100	0.815444	9.215152e-52	-8.615850e-47
Msa1037640	Msa1196100	0.822113	2.818582e-53	-8.615850e-47
Msa1085480	Msa1196100	0.805715	1.167538e-49	-8.615850e-47
Msa0264870	Msa1196100	0.817048	4.034942e-52	-8.615850e-47
Msa0292400	Msa1196100	0.803732	3.028632e-49	-8.615850e-47
Msa0302380	Msa1196100	0.802440	5.606081e-49	-8.615850e-47
Msa1160910	Msa1196100	0.803027	4.239866e-49	-8.615850e-47
Msa1173330	Msa1196100	0.861831	7.779323e-64	-8.615850e-47
Msa1196100	Msa1200370	0.823504	1.336475e-53	-8.615850e-47
Msa1196100	Msa1232710	0.872654	2.694027e-67	-8.615850e-47
Msa1196100	Msa1252190	0.811163	8.032007e-51	-8.615850e-47
Msa1196100	Msa1253310	0.811131	8.161162e-51	-8.615850e-47
Msa1196100	Msa1256340	0.879210	1.500208e-69	-8.615850e-47
Msa1196100	Msa1296580	0.836744	7.819444e-57	-8.615850e-47
Msa1196100	Msa1307570	0.864215	1.426872e-64	-8.615850e-47
Msa1196100	Msa1313300	0.875788	2.338305e-68	-8.615850e-47
Msa1196100	Msa1363260	0.810569	1.080027e-50	-8.615850e-47
Msa1196100	Msa1432950	0.836989	6.769964e-57	-8.615850e-47
Msa1196100	Msa1459380	0.824800	6.632465e-54	-8.615850e-47
Msa0527860	Msa1196100	0.807624	4.615424e-50	-8.615850e-47
Msa0582450	Msa1196100	0.805803	1.119255e-49	-8.615850e-47
Msa0586190	Msa1196100	0.806747	7.077675e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1196100	MtrunA17_Chr4g0053381	98.050	359	7	0	1	359	1	359	0.0	726
Msa1196100	MtrunA17_Chr1g0208231	54.286	315	134	5	47	355	68	378	2.55e-114	337
Msa1196100	MtrunA17_Chr3g0134261	56.436	303	124	6	42	340	46	344	2.19e-109	323
Msa1196100	MtrunA17_Chr4g0041721	36.667	240	140	6	81	315	91	323	1.09e-46	162
Msa1196100	MtrunA17_Chr3g0133211	36.842	266	151	5	8	258	10	273	2.27e-46	161
Msa1196100	MtrunA17_Chr5g0412471	32.476	311	187	10	8	308	11	308	2.19e-43	153
Msa1196100	MtrunA17_Chr5g0414271	38.075	239	131	6	52	280	43	274	3.43e-40	144
Msa1196100	MtrunA17_Chr8g0364521	38.049	205	114	3	81	279	93	290	4.51e-35	131
Msa1196100	MtrunA17_Chr5g0427191	30.201	298	192	8	53	341	55	345	7.56e-33	125
Msa1196100	MtrunA17_Chr8g0367661	32.646	291	153	12	52	312	61	338	2.13e-30	119
Msa1196100	MtrunA17_Chr5g0401271	35.802	162	99	3	78	239	99	255	1.29e-28	114
Msa1196100	MtrunA17_Chr2g0323361	28.352	261	171	7	82	336	51	301	1.04e-27	110
Msa1196100	MtrunA17_Chr3g0134781	39.098	133	80	1	69	201	54	185	1.12e-26	108
Msa1196100	MtrunA17_Chr2g0280941	30.526	190	115	5	76	256	35	216	1.17e-23	98.6
Msa1196100	MtrunA17_Chr4g0054011	32.227	211	120	8	78	275	64	264	1.23e-13	70.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1196100	AT5G67260.1	51.389	360	149	8	11	359	23	367	8.79e-114	335
Msa1196100	AT5G67260.2	51.143	350	145	8	11	349	23	357	1.92e-108	323
Msa1196100	AT3G50070.1	48.747	359	161	7	8	359	19	361	3.10e-101	303
Msa1196100	AT4G34160.1	50.505	297	133	5	3	294	11	298	6.41e-94	285
Msa1196100	AT2G22490.1	37.918	269	146	10	52	308	64	323	1.96e-44	157
Msa1196100	AT2G22490.2	36.131	274	145	10	52	308	64	324	6.25e-43	153
Msa1196100	AT5G65420.4	37.247	247	134	7	8	246	9	242	3.34e-42	148
Msa1196100	AT5G65420.1	37.247	247	134	7	8	246	9	242	1.15e-41	148
Msa1196100	AT5G65420.2	40.513	195	101	5	8	197	9	193	2.47e-41	145
Msa1196100	AT1G70210.1	34.507	284	149	9	9	280	23	281	1.55e-39	143
Msa1196100	AT5G65420.3	35.798	257	134	8	8	246	9	252	6.77e-39	141
Msa1196100	AT5G10440.2	36.702	188	114	3	51	233	34	221	3.16e-35	129
Msa1196100	AT5G10440.1	37.624	202	114	5	51	244	34	231	3.80e-35	130
Msa1196100	AT4G37630.3	32.738	168	92	4	51	198	23	189	1.41e-21	93.2
Msa1196100	AT4G37630.2	32.530	166	93	3	51	198	23	187	1.51e-21	93.2
Msa1196100	AT4G37630.1	32.738	168	92	4	51	198	23	189	2.51e-21	93.6
Msa1196100	AT4G03270.1	29.885	174	116	4	103	273	78	248	4.41e-18	84.0
Msa1196100	AT5G02110.1	32.738	168	110	2	71	238	67	231	3.33e-17	82.0
Msa1196100	AT4G03270.2	29.885	174	115	5	103	273	78	247	1.89e-16	79.3
Msa1196100	AT5G02110.2	35.965	114	70	2	125	238	92	202	2.00e-11	64.7

Find 100 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCATCCACTTTGTTGTTTA+AGG	0.045934	8_1:-44813029	Msa1196100:three_prime_UTR
CAGATACGCGCTTACGTTTC+TGG	0.117684	8_1:+44813427	None:intergenic
ATGTACTCAGTTGCATTAAA+TGG	0.206291	8_1:+44813689	None:intergenic
AACCCATGTGCCACTTCTTT+TGG	0.207318	8_1:-44814270	Msa1196100:CDS
TCTAGAGTTTGTGCTCATTA+TGG	0.211445	8_1:-44814431	Msa1196100:CDS
CTAGAGTTTGTGCTCATTAT+GGG	0.225299	8_1:-44814430	Msa1196100:CDS
TAACTAGAACATAATGTAAT+TGG	0.246056	8_1:+44813113	None:intergenic
TGTTCAACAATGATATGTTT+TGG	0.249151	8_1:-44814571	Msa1196100:CDS
TCCATTCATCTTCAAATGTT+TGG	0.288440	8_1:+44813074	None:intergenic
AGCTCTCTTTCACATAATTC+TGG	0.291480	8_1:-44813163	Msa1196100:three_prime_UTR
GGAAGGAGATGGAGCGTTTA+CGG	0.322201	8_1:+44815063	None:intergenic
TGAGGTTGAGACATCTTCTA+TGG	0.337053	8_1:+44814707	None:intergenic
TATACAAAGAATGGAGCTTT+TGG	0.337064	8_1:-44814068	Msa1196100:CDS
CAAAATCATCGTTAATCAAA+TGG	0.341802	8_1:+44814504	None:intergenic
ATGTGTTCAAAGAATGAAAT+TGG	0.377203	8_1:+44814007	None:intergenic
CACTGTTGTTGTCAGATTCA+AGG	0.379599	8_1:-44813781	Msa1196100:intron
TGAGTACATTGAACAACTCT+TGG	0.400069	8_1:-44813675	Msa1196100:CDS
GCGATAGCTCAAATGATTCA+TGG	0.403105	8_1:-44813362	Msa1196100:CDS
GTTCTTCTTCATGTCATTGT+TGG	0.405061	8_1:-44813923	Msa1196100:intron
TTTGTTGTTTAAGGTGGTGC+AGG	0.405236	8_1:-44813020	Msa1196100:three_prime_UTR
AAGTTATTAGTTTGCGATGA+TGG	0.406328	8_1:-44813465	Msa1196100:CDS
TGGTGTTATCTACATTGAAA+TGG	0.411519	8_1:-44814048	Msa1196100:CDS
TTCTGGTGGCTGTTATGTTA+TGG	0.413700	8_1:-44813146	Msa1196100:three_prime_UTR
TGTTTCATTGTGAGAAAGAA+GGG	0.418657	8_1:+44814750	None:intergenic
CGTATCTGAACCAGGTAGTC+CGG	0.423092	8_1:-44813412	Msa1196100:CDS
GATTAATTGAAATCAGAAAC+AGG	0.425258	8_1:+44815025	None:intergenic
GTGAGAAAGAAGGGAGAGAA+AGG	0.425492	8_1:+44814759	None:intergenic
TTTGAAGAGCCGTTTGCATT+GGG	0.428112	8_1:-44813969	Msa1196100:CDS
GTTCAATCTCTTTAATTACA+TGG	0.432813	8_1:+44813711	None:intergenic
GCCAAACATTTGAAGATGAA+TGG	0.435014	8_1:-44813075	Msa1196100:three_prime_UTR
GTTTGAAGAGCCGTTTGCAT+TGG	0.436083	8_1:-44813970	Msa1196100:CDS
AAACAGGCTGTTTGCCGCCT+AGG	0.439213	8_1:+44815041	None:intergenic
AAAATGAACAGCAGAGAGAT+TGG	0.439244	8_1:+44812854	None:intergenic
TAGTAAAGGTAGAAAAGAAA+AGG	0.443131	8_1:-44814930	Msa1196100:five_prime_UTR
GTAGCAGCAGCCAATGTAGA+AGG	0.443163	8_1:+44813740	None:intergenic
CTCTGCTGTTCATGAAGTAT+AGG	0.443288	8_1:-44812816	None:intergenic
GATTGAAGCTTTGTAGCAGA+TGG	0.445655	8_1:+44814605	None:intergenic
AAAATCATCGTTAATCAAAT+GGG	0.446028	8_1:+44814505	None:intergenic
TTGTTTCATTGTGAGAAAGA+AGG	0.447407	8_1:+44814749	None:intergenic
AGCAGATGGGTCGTTGGTAA+TGG	0.447779	8_1:+44814619	None:intergenic
CCAGCAGATGCGATTGCCTT+CGG	0.448229	8_1:-44813277	Msa1196100:CDS
CAGAGAAAGGAAGGAGATTG+AGG	0.449243	8_1:+44814689	None:intergenic
GAGTTATCTTCCTTCTACAT+TGG	0.453122	8_1:-44813750	Msa1196100:CDS
TTGAATGAGTCTCGTGTTGA+AGG	0.454018	8_1:-44814467	Msa1196100:CDS
CTCGTGTTGAAGGTGTGAAT+TGG	0.455681	8_1:-44814457	Msa1196100:CDS
AGCTAAAACTATACAAAGAA+TGG	0.456932	8_1:-44814077	Msa1196100:CDS
CAAGAGATAATATTTGTCTT+GGG	0.459207	8_1:-44815086	None:intergenic
TACTAGTTTGAAGTTTCAAA+AGG	0.459874	8_1:-44814357	Msa1196100:CDS
GTTTGCATTGGGAGTTTATG+TGG	0.461092	8_1:-44813958	Msa1196100:CDS
GAGTACATTGAACAACTCTT+GGG	0.474105	8_1:-44813674	Msa1196100:CDS
AAGAATGAAATTGGTGTCAC+TGG	0.474814	8_1:+44814016	None:intergenic
GTTGGTAATGGTTTCAGAAT+CGG	0.474985	8_1:+44814631	None:intergenic
ATGGAGAAGATGAAGAGAAA+AGG	0.478077	8_1:+44814726	None:intergenic
GTGAGATTGAAGATGATGAA+TGG	0.479973	8_1:+44814870	None:intergenic
AACAGGCTGTTTGCCGCCTA+GGG	0.485686	8_1:+44815042	None:intergenic
ACTGTTGTTGTCAGATTCAA+GGG	0.488226	8_1:-44813780	Msa1196100:intron
ATCCACTTTGTTGTTTAAGG+TGG	0.489760	8_1:-44813026	Msa1196100:three_prime_UTR
ACATAAACTCCCAATGCAAA+CGG	0.499623	8_1:+44813960	None:intergenic
AGTTTCAAAAGGATAAGCCT+TGG	0.509680	8_1:-44814346	Msa1196100:CDS
CCGAAGGCAATCGCATCTGC+TGG	0.515805	8_1:+44813277	None:intergenic
TGTTCTTCACAGAGAAAGGA+AGG	0.526108	8_1:+44814680	None:intergenic
GTTTATGTGGCGTTGTGAGA+AGG	0.526725	8_1:-44813945	Msa1196100:CDS
ATGACACCACCCGGACTACC+TGG	0.527412	8_1:+44813402	None:intergenic
TTGTTGTTTAAGGTGGTGCA+GGG	0.533062	8_1:-44813019	Msa1196100:three_prime_UTR
GAACACATTGTTAGAAGACT+TGG	0.535174	8_1:-44813992	Msa1196100:CDS
CACTGCAGCCGATGTTCAAG+AGG	0.536747	8_1:-44813314	Msa1196100:CDS
TTAAACAACAAAGTGGATGA+AGG	0.543730	8_1:+44813031	None:intergenic
GAGTGAGTAATGAAAACAAA+GGG	0.548729	8_1:+44814892	None:intergenic
TGTTGCTTGTTTGTCTCTTG+CGG	0.549218	8_1:-44814306	Msa1196100:CDS
TCTCTTTCACATAATTCTGG+TGG	0.561716	8_1:-44813160	Msa1196100:three_prime_UTR
CTTTGTAGCAGATGGGTCGT+TGG	0.562433	8_1:+44814613	None:intergenic
CATTATTAAACAACAACCAT+AGG	0.565183	8_1:-44814979	Msa1196100:five_prime_UTR
TTCATGGACTGCAGCATCGT+CGG	0.565891	8_1:-44813346	Msa1196100:CDS
CGTAAGCGCGTATCTGAACC+AGG	0.577606	8_1:-44813420	Msa1196100:CDS
GTATCTGAACCAGGTAGTCC+GGG	0.579695	8_1:-44813411	Msa1196100:CDS
ATTGAAGCTTTGTAGCAGAT+GGG	0.581201	8_1:+44814606	None:intergenic
GCTCTGCTCCTCTTGAACAT+CGG	0.583132	8_1:+44813306	None:intergenic
AACGCTCCATCTCCTTCCCT+AGG	0.586681	8_1:-44815058	Msa1196100:five_prime_UTR
ACTTGAAAATCCAAAAGAAG+TGG	0.586683	8_1:+44814260	None:intergenic
TTGCCGCCTAGGGAAGGAGA+TGG	0.591514	8_1:+44815052	None:intergenic
AATCCAAAAGAAGTGGCACA+TGG	0.596075	8_1:+44814267	None:intergenic
ATTTGAAGATGAATGGAATG+AGG	0.596504	8_1:-44813068	Msa1196100:three_prime_UTR
CACCACCTTAAACAACAAAG+TGG	0.597864	8_1:+44813024	None:intergenic
AATGGTTTCAGAATCGGTGA+GGG	0.604541	8_1:+44814637	None:intergenic
GGTGAGGGATTCATCTTCGA+AGG	0.608754	8_1:+44814652	None:intergenic
GGAGTGAGTAATGAAAACAA+AGG	0.621907	8_1:+44814891	None:intergenic
ATCCAAAAGAAGTGGCACAT+GGG	0.625549	8_1:+44814268	None:intergenic
AGATGAATGGAATGAGGCAG+AGG	0.625896	8_1:-44813062	Msa1196100:three_prime_UTR
GGGTTTACTAAAGATTAGTG+AGG	0.633483	8_1:-44813654	Msa1196100:intron
GCAGCTGATAGATAACTCAC+AGG	0.637755	8_1:+44812952	None:intergenic
GCAGTAAGCTGAGTCATCCA+AGG	0.637891	8_1:+44814329	None:intergenic
ATCATCATCATTAATTAACG+AGG	0.639316	8_1:+44813222	None:intergenic
TCATCATCATTAATTAACGA+GGG	0.645108	8_1:+44813223	None:intergenic
TGTTATCTACATTGAAATGG+AGG	0.653096	8_1:-44814045	Msa1196100:CDS
GATGCATCAATGACACCACC+CGG	0.655887	8_1:+44813393	None:intergenic
TAATGGTTTCAGAATCGGTG+AGG	0.661033	8_1:+44814636	None:intergenic
ATAGACACACGATTAACCGA+AGG	0.692739	8_1:+44813261	None:intergenic
TCTGAACCAGGTAGTCCGGG+TGG	0.704205	8_1:-44813408	Msa1196100:CDS
GCTCCATCTCCTTCCCTAGG+CGG	0.718588	8_1:-44815055	Msa1196100:five_prime_UTR
GTAGTTGACAGCAAGAACAG+TGG	0.728516	8_1:+44814394	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTATGTTTTTTTGTT+AGG	-	chr8_1:44813764-44813783	Msa1196100:CDS	10.0%
!!!	TTTTTTTATGTTTTTTTGTT+AGG	-	chr8_1:44813764-44813783	Msa1196100:CDS	10.0%
!!	AAAAAAGAAAAAATCACCTA+TGG	+	chr8_1:44812929-44812948	None:intergenic	20.0%
!!!	TTTTTTGTTGAGAATAGTAA+AGG	-	chr8_1:44812945-44812964	Msa1196100:three_prime_UTR	20.0%
!!!	AGTTTTTGTTTTTTTTTAGG+AGG	+	chr8_1:44813046-44813065	None:intergenic	20.0%
!!!	TGGAGTTTTTGTTTTTTTTT+AGG	+	chr8_1:44813049-44813068	None:intergenic	20.0%
!!	AAAATCATCGTTAATCAAAT+GGG	+	chr8_1:44813387-44813406	None:intergenic	20.0%
!!	CATCAAAAAACAAAACTTTA+TGG	+	chr8_1:44813690-44813709	None:intergenic	20.0%
!!!	TTTTTGATGTTTTAAGTTGA+TGG	-	chr8_1:44813701-44813720	Msa1196100:CDS	20.0%
!!!	TTTTGATGTTTTAAGTTGAT+GGG	-	chr8_1:44813702-44813721	Msa1196100:CDS	20.0%
!!	TAATAAATATGATACTGTAC+TGG	-	chr8_1:44814019-44814038	Msa1196100:CDS	20.0%
!!!	TAGTATTTTTACTTCAAATG+TGG	-	chr8_1:44814702-44814721	Msa1196100:exon	20.0%
!!	TAACTAGAACATAATGTAAT+TGG	+	chr8_1:44814779-44814798	None:intergenic	20.0%
!!	AAAAAAGAAAAAATCACCTA+TGG	+	chr8_1:44812929-44812948	None:intergenic	20.0%
!!!	TTTTTTGTTGAGAATAGTAA+AGG	-	chr8_1:44812945-44812964	Msa1196100:three_prime_UTR	20.0%
!!!	AGTTTTTGTTTTTTTTTAGG+AGG	+	chr8_1:44813046-44813065	None:intergenic	20.0%
!!!	TGGAGTTTTTGTTTTTTTTT+AGG	+	chr8_1:44813049-44813068	None:intergenic	20.0%
!!	AAAATCATCGTTAATCAAAT+GGG	+	chr8_1:44813387-44813406	None:intergenic	20.0%
!!	CATCAAAAAACAAAACTTTA+TGG	+	chr8_1:44813690-44813709	None:intergenic	20.0%
!!!	TTTTTGATGTTTTAAGTTGA+TGG	-	chr8_1:44813701-44813720	Msa1196100:CDS	20.0%
!!!	TTTTGATGTTTTAAGTTGAT+GGG	-	chr8_1:44813702-44813721	Msa1196100:CDS	20.0%
!!	TAATAAATATGATACTGTAC+TGG	-	chr8_1:44814019-44814038	Msa1196100:CDS	20.0%
!!!	TAGTATTTTTACTTCAAATG+TGG	-	chr8_1:44814702-44814721	Msa1196100:exon	20.0%
!!	TAACTAGAACATAATGTAAT+TGG	+	chr8_1:44814779-44814798	None:intergenic	20.0%
!	GATTAATTGAAATCAGAAAC+AGG	+	chr8_1:44812867-44812886	None:intergenic	25.0%
!	CATTATTAAACAACAACCAT+AGG	-	chr8_1:44812910-44812929	Msa1196100:three_prime_UTR	25.0%
!	TAGTAAAGGTAGAAAAGAAA+AGG	-	chr8_1:44812959-44812978	Msa1196100:three_prime_UTR	25.0%
!!	TGTTCAACAATGATATGTTT+TGG	-	chr8_1:44813318-44813337	Msa1196100:CDS	25.0%
!!	GTTCAACAATGATATGTTTT+GGG	-	chr8_1:44813319-44813338	Msa1196100:CDS	25.0%
!	CAAAATCATCGTTAATCAAA+TGG	+	chr8_1:44813388-44813407	None:intergenic	25.0%
!!!	AACGATGATTTTGTTATTGA+TGG	-	chr8_1:44813395-44813414	Msa1196100:CDS	25.0%
!!	TACTAGTTTGAAGTTTCAAA+AGG	-	chr8_1:44813532-44813551	Msa1196100:intron	25.0%
!!!	TATGTTTTTTTGTTAGGTTG+AGG	-	chr8_1:44813770-44813789	Msa1196100:intron	25.0%
!	AGCTAAAACTATACAAAGAA+TGG	-	chr8_1:44813812-44813831	Msa1196100:intron	25.0%
!	ATGTGTTCAAAGAATGAAAT+TGG	+	chr8_1:44813885-44813904	None:intergenic	25.0%
!!!	ATAAGTACCATTAGTCTTAA+TGG	+	chr8_1:44814075-44814094	None:intergenic	25.0%
!	GTTCAATCTCTTTAATTACA+TGG	+	chr8_1:44814181-44814200	None:intergenic	25.0%
!	AACAATTATTGACAATGTAG+AGG	+	chr8_1:44814288-44814307	None:intergenic	25.0%
!	ATAAGTGAAATGACTAAGTT+TGG	-	chr8_1:44814341-44814360	Msa1196100:CDS	25.0%
!	TCATCATCATTAATTAACGA+GGG	+	chr8_1:44814669-44814688	None:intergenic	25.0%
!	ATCATCATCATTAATTAACG+AGG	+	chr8_1:44814670-44814689	None:intergenic	25.0%
!	GATTAATTGAAATCAGAAAC+AGG	+	chr8_1:44812867-44812886	None:intergenic	25.0%
!	CATTATTAAACAACAACCAT+AGG	-	chr8_1:44812910-44812929	Msa1196100:three_prime_UTR	25.0%
!	TAGTAAAGGTAGAAAAGAAA+AGG	-	chr8_1:44812959-44812978	Msa1196100:three_prime_UTR	25.0%
!!	TGTTCAACAATGATATGTTT+TGG	-	chr8_1:44813318-44813337	Msa1196100:CDS	25.0%
!!	GTTCAACAATGATATGTTTT+GGG	-	chr8_1:44813319-44813338	Msa1196100:CDS	25.0%
!	CAAAATCATCGTTAATCAAA+TGG	+	chr8_1:44813388-44813407	None:intergenic	25.0%
!!!	AACGATGATTTTGTTATTGA+TGG	-	chr8_1:44813395-44813414	Msa1196100:CDS	25.0%
!!	TACTAGTTTGAAGTTTCAAA+AGG	-	chr8_1:44813532-44813551	Msa1196100:intron	25.0%
!!!	TATGTTTTTTTGTTAGGTTG+AGG	-	chr8_1:44813770-44813789	Msa1196100:intron	25.0%
!	AGCTAAAACTATACAAAGAA+TGG	-	chr8_1:44813812-44813831	Msa1196100:intron	25.0%
!	ATGTGTTCAAAGAATGAAAT+TGG	+	chr8_1:44813885-44813904	None:intergenic	25.0%
!!!	ATAAGTACCATTAGTCTTAA+TGG	+	chr8_1:44814075-44814094	None:intergenic	25.0%
!	GTTCAATCTCTTTAATTACA+TGG	+	chr8_1:44814181-44814200	None:intergenic	25.0%
!	AACAATTATTGACAATGTAG+AGG	+	chr8_1:44814288-44814307	None:intergenic	25.0%
!	ATAAGTGAAATGACTAAGTT+TGG	-	chr8_1:44814341-44814360	Msa1196100:CDS	25.0%
!	TCATCATCATTAATTAACGA+GGG	+	chr8_1:44814669-44814688	None:intergenic	25.0%
!	ATCATCATCATTAATTAACG+AGG	+	chr8_1:44814670-44814689	None:intergenic	25.0%
	GAGTGAGTAATGAAAACAAA+GGG	+	chr8_1:44813000-44813019	None:intergenic	30.0%
!!!	TGTTTGTTTTTTTCTCTCAC+TGG	+	chr8_1:44813069-44813088	None:intergenic	30.0%
	TGTTTCATTGTGAGAAAGAA+GGG	+	chr8_1:44813142-44813161	None:intergenic	30.0%
	TTGTTTCATTGTGAGAAAGA+AGG	+	chr8_1:44813143-44813162	None:intergenic	30.0%
	ACTTGAAAATCCAAAAGAAG+TGG	+	chr8_1:44813632-44813651	None:intergenic	30.0%
!	TATACAAAGAATGGAGCTTT+TGG	-	chr8_1:44813821-44813840	Msa1196100:intron	30.0%
!!	TGGTGTTATCTACATTGAAA+TGG	-	chr8_1:44813841-44813860	Msa1196100:intron	30.0%
	TGTTATCTACATTGAAATGG+AGG	-	chr8_1:44813844-44813863	Msa1196100:intron	30.0%
	ATGTACTCAGTTGCATTAAA+TGG	+	chr8_1:44814203-44814222	None:intergenic	30.0%
!	TGAATTTTCCAAATCTGATG+CGG	-	chr8_1:44814307-44814326	Msa1196100:CDS	30.0%
!!	TGGTGATGATTTGATTTTAC+AGG	-	chr8_1:44814369-44814388	Msa1196100:CDS	30.0%
!!	AAGTTATTAGTTTGCGATGA+TGG	-	chr8_1:44814424-44814443	Msa1196100:CDS	30.0%
	TCCATTCATCTTCAAATGTT+TGG	+	chr8_1:44814818-44814837	None:intergenic	30.0%
	ATTTGAAGATGAATGGAATG+AGG	-	chr8_1:44814821-44814840	Msa1196100:five_prime_UTR	30.0%
	TTAAACAACAAAGTGGATGA+AGG	+	chr8_1:44814861-44814880	None:intergenic	30.0%
!!	TTCATCCACTTTGTTGTTTA+AGG	-	chr8_1:44814860-44814879	Msa1196100:five_prime_UTR	30.0%
	GAGTGAGTAATGAAAACAAA+GGG	+	chr8_1:44813000-44813019	None:intergenic	30.0%
!!!	TGTTTGTTTTTTTCTCTCAC+TGG	+	chr8_1:44813069-44813088	None:intergenic	30.0%
	TGTTTCATTGTGAGAAAGAA+GGG	+	chr8_1:44813142-44813161	None:intergenic	30.0%
	TTGTTTCATTGTGAGAAAGA+AGG	+	chr8_1:44813143-44813162	None:intergenic	30.0%
	ACTTGAAAATCCAAAAGAAG+TGG	+	chr8_1:44813632-44813651	None:intergenic	30.0%
!	TATACAAAGAATGGAGCTTT+TGG	-	chr8_1:44813821-44813840	Msa1196100:intron	30.0%
!!	TGGTGTTATCTACATTGAAA+TGG	-	chr8_1:44813841-44813860	Msa1196100:intron	30.0%
	TGTTATCTACATTGAAATGG+AGG	-	chr8_1:44813844-44813863	Msa1196100:intron	30.0%
	ATGTACTCAGTTGCATTAAA+TGG	+	chr8_1:44814203-44814222	None:intergenic	30.0%
!	TGAATTTTCCAAATCTGATG+CGG	-	chr8_1:44814307-44814326	Msa1196100:CDS	30.0%
!!	TGGTGATGATTTGATTTTAC+AGG	-	chr8_1:44814369-44814388	Msa1196100:CDS	30.0%
!!	AAGTTATTAGTTTGCGATGA+TGG	-	chr8_1:44814424-44814443	Msa1196100:CDS	30.0%
	TCCATTCATCTTCAAATGTT+TGG	+	chr8_1:44814818-44814837	None:intergenic	30.0%
	ATTTGAAGATGAATGGAATG+AGG	-	chr8_1:44814821-44814840	Msa1196100:five_prime_UTR	30.0%
	TTAAACAACAAAGTGGATGA+AGG	+	chr8_1:44814861-44814880	None:intergenic	30.0%
!!	TTCATCCACTTTGTTGTTTA+AGG	-	chr8_1:44814860-44814879	Msa1196100:five_prime_UTR	30.0%
	GGAGTGAGTAATGAAAACAA+AGG	+	chr8_1:44813001-44813020	None:intergenic	35.0%
	GTGAGATTGAAGATGATGAA+TGG	+	chr8_1:44813022-44813041	None:intergenic	35.0%
	ATGGAGAAGATGAAGAGAAA+AGG	+	chr8_1:44813166-44813185	None:intergenic	35.0%
!!	GTTTTGTTCTTCACAGAGAA+AGG	+	chr8_1:44813216-44813235	None:intergenic	35.0%
!!	GTTGGTAATGGTTTCAGAAT+CGG	+	chr8_1:44813261-44813280	None:intergenic	35.0%
!	ATTGAAGCTTTGTAGCAGAT+GGG	+	chr8_1:44813286-44813305	None:intergenic	35.0%
!	TCTAGAGTTTGTGCTCATTA+TGG	-	chr8_1:44813458-44813477	Msa1196100:CDS	35.0%
	CTAGAGTTTGTGCTCATTAT+GGG	-	chr8_1:44813459-44813478	Msa1196100:CDS	35.0%
	AGTTTCAAAAGGATAAGCCT+TGG	-	chr8_1:44813543-44813562	Msa1196100:intron	35.0%
!!	AAGAATGAAATTGGTGTCAC+TGG	+	chr8_1:44813876-44813895	None:intergenic	35.0%
	GAACACATTGTTAGAAGACT+TGG	-	chr8_1:44813897-44813916	Msa1196100:intron	35.0%
	ACATAAACTCCCAATGCAAA+CGG	+	chr8_1:44813932-44813951	None:intergenic	35.0%
	GTTCTTCTTCATGTCATTGT+TGG	-	chr8_1:44813966-44813985	Msa1196100:CDS	35.0%
	AGACATGCCATTAAGACTAA+TGG	-	chr8_1:44814065-44814084	Msa1196100:CDS	35.0%
	ACTGTTGTTGTCAGATTCAA+GGG	-	chr8_1:44814109-44814128	Msa1196100:intron	35.0%
	GAGTTATCTTCCTTCTACAT+TGG	-	chr8_1:44814139-44814158	Msa1196100:intron	35.0%
	TGAGTACATTGAACAACTCT+TGG	-	chr8_1:44814214-44814233	Msa1196100:intron	35.0%
	GAGTACATTGAACAACTCTT+GGG	-	chr8_1:44814215-44814234	Msa1196100:intron	35.0%
	GGGTTTACTAAAGATTAGTG+AGG	-	chr8_1:44814235-44814254	Msa1196100:intron	35.0%
!	GAATTTTCCAAATCTGATGC+GGG	-	chr8_1:44814308-44814327	Msa1196100:CDS	35.0%
!!	AATGACTAAGTTTGGTGTCT+TGG	-	chr8_1:44814349-44814368	Msa1196100:CDS	35.0%
	AGCTCTCTTTCACATAATTC+TGG	-	chr8_1:44814726-44814745	Msa1196100:five_prime_UTR	35.0%
	TCTCTTTCACATAATTCTGG+TGG	-	chr8_1:44814729-44814748	Msa1196100:five_prime_UTR	35.0%
	GCCAAACATTTGAAGATGAA+TGG	-	chr8_1:44814814-44814833	Msa1196100:five_prime_UTR	35.0%
!!	ATCCACTTTGTTGTTTAAGG+TGG	-	chr8_1:44814863-44814882	Msa1196100:five_prime_UTR	35.0%
	AAAATGAACAGCAGAGAGAT+TGG	+	chr8_1:44815038-44815057	None:intergenic	35.0%
!!!	CTCTCTGCTGTTCATTTTTT+TGG	-	chr8_1:44815040-44815059	Msa1196100:five_prime_UTR	35.0%
	GGAGTGAGTAATGAAAACAA+AGG	+	chr8_1:44813001-44813020	None:intergenic	35.0%
	GTGAGATTGAAGATGATGAA+TGG	+	chr8_1:44813022-44813041	None:intergenic	35.0%
	ATGGAGAAGATGAAGAGAAA+AGG	+	chr8_1:44813166-44813185	None:intergenic	35.0%
!!	GTTTTGTTCTTCACAGAGAA+AGG	+	chr8_1:44813216-44813235	None:intergenic	35.0%
!!	GTTGGTAATGGTTTCAGAAT+CGG	+	chr8_1:44813261-44813280	None:intergenic	35.0%
!	ATTGAAGCTTTGTAGCAGAT+GGG	+	chr8_1:44813286-44813305	None:intergenic	35.0%
!	TCTAGAGTTTGTGCTCATTA+TGG	-	chr8_1:44813458-44813477	Msa1196100:CDS	35.0%
	CTAGAGTTTGTGCTCATTAT+GGG	-	chr8_1:44813459-44813478	Msa1196100:CDS	35.0%
	AGTTTCAAAAGGATAAGCCT+TGG	-	chr8_1:44813543-44813562	Msa1196100:intron	35.0%
!!	AAGAATGAAATTGGTGTCAC+TGG	+	chr8_1:44813876-44813895	None:intergenic	35.0%
	GAACACATTGTTAGAAGACT+TGG	-	chr8_1:44813897-44813916	Msa1196100:intron	35.0%
	ACATAAACTCCCAATGCAAA+CGG	+	chr8_1:44813932-44813951	None:intergenic	35.0%
	GTTCTTCTTCATGTCATTGT+TGG	-	chr8_1:44813966-44813985	Msa1196100:CDS	35.0%
	AGACATGCCATTAAGACTAA+TGG	-	chr8_1:44814065-44814084	Msa1196100:CDS	35.0%
	ACTGTTGTTGTCAGATTCAA+GGG	-	chr8_1:44814109-44814128	Msa1196100:intron	35.0%
	GAGTTATCTTCCTTCTACAT+TGG	-	chr8_1:44814139-44814158	Msa1196100:intron	35.0%
	TGAGTACATTGAACAACTCT+TGG	-	chr8_1:44814214-44814233	Msa1196100:intron	35.0%
	GAGTACATTGAACAACTCTT+GGG	-	chr8_1:44814215-44814234	Msa1196100:intron	35.0%
	GGGTTTACTAAAGATTAGTG+AGG	-	chr8_1:44814235-44814254	Msa1196100:intron	35.0%
!	GAATTTTCCAAATCTGATGC+GGG	-	chr8_1:44814308-44814327	Msa1196100:CDS	35.0%
!!	AATGACTAAGTTTGGTGTCT+TGG	-	chr8_1:44814349-44814368	Msa1196100:CDS	35.0%
	AGCTCTCTTTCACATAATTC+TGG	-	chr8_1:44814726-44814745	Msa1196100:five_prime_UTR	35.0%
	TCTCTTTCACATAATTCTGG+TGG	-	chr8_1:44814729-44814748	Msa1196100:five_prime_UTR	35.0%
	GCCAAACATTTGAAGATGAA+TGG	-	chr8_1:44814814-44814833	Msa1196100:five_prime_UTR	35.0%
!!	ATCCACTTTGTTGTTTAAGG+TGG	-	chr8_1:44814863-44814882	Msa1196100:five_prime_UTR	35.0%
	AAAATGAACAGCAGAGAGAT+TGG	+	chr8_1:44815038-44815057	None:intergenic	35.0%
!!!	CTCTCTGCTGTTCATTTTTT+TGG	-	chr8_1:44815040-44815059	Msa1196100:five_prime_UTR	35.0%
	TGAGGTTGAGACATCTTCTA+TGG	+	chr8_1:44813185-44813204	None:intergenic	40.0%
	TGTTCTTCACAGAGAAAGGA+AGG	+	chr8_1:44813212-44813231	None:intergenic	40.0%
	AATGGTTTCAGAATCGGTGA+GGG	+	chr8_1:44813255-44813274	None:intergenic	40.0%
	TAATGGTTTCAGAATCGGTG+AGG	+	chr8_1:44813256-44813275	None:intergenic	40.0%
!	GATTGAAGCTTTGTAGCAGA+TGG	+	chr8_1:44813287-44813306	None:intergenic	40.0%
	TTGAATGAGTCTCGTGTTGA+AGG	-	chr8_1:44813422-44813441	Msa1196100:CDS	40.0%
!	TGTTGCTTGTTTGTCTCTTG+CGG	-	chr8_1:44813583-44813602	Msa1196100:intron	40.0%
	ATCCAAAAGAAGTGGCACAT+GGG	+	chr8_1:44813624-44813643	None:intergenic	40.0%
	AATCCAAAAGAAGTGGCACA+TGG	+	chr8_1:44813625-44813644	None:intergenic	40.0%
	TTTGAAGAGCCGTTTGCATT+GGG	-	chr8_1:44813920-44813939	Msa1196100:intron	40.0%
	GTTTGCATTGGGAGTTTATG+TGG	-	chr8_1:44813931-44813950	Msa1196100:CDS	40.0%
	CACTGTTGTTGTCAGATTCA+AGG	-	chr8_1:44814108-44814127	Msa1196100:intron	40.0%
	GCGATAGCTCAAATGATTCA+TGG	-	chr8_1:44814527-44814546	Msa1196100:CDS	40.0%
	ATAGACACACGATTAACCGA+AGG	+	chr8_1:44814631-44814650	None:intergenic	40.0%
	TTCTGGTGGCTGTTATGTTA+TGG	-	chr8_1:44814743-44814762	Msa1196100:five_prime_UTR	40.0%
	CACCACCTTAAACAACAAAG+TGG	+	chr8_1:44814868-44814887	None:intergenic	40.0%
!!	TTTGTTGTTTAAGGTGGTGC+AGG	-	chr8_1:44814869-44814888	Msa1196100:five_prime_UTR	40.0%
!!	TTGTTGTTTAAGGTGGTGCA+GGG	-	chr8_1:44814870-44814889	Msa1196100:five_prime_UTR	40.0%
	TGAGGTTGAGACATCTTCTA+TGG	+	chr8_1:44813185-44813204	None:intergenic	40.0%
	TGTTCTTCACAGAGAAAGGA+AGG	+	chr8_1:44813212-44813231	None:intergenic	40.0%
	AATGGTTTCAGAATCGGTGA+GGG	+	chr8_1:44813255-44813274	None:intergenic	40.0%
	TAATGGTTTCAGAATCGGTG+AGG	+	chr8_1:44813256-44813275	None:intergenic	40.0%
!	GATTGAAGCTTTGTAGCAGA+TGG	+	chr8_1:44813287-44813306	None:intergenic	40.0%
	TTGAATGAGTCTCGTGTTGA+AGG	-	chr8_1:44813422-44813441	Msa1196100:CDS	40.0%
!	TGTTGCTTGTTTGTCTCTTG+CGG	-	chr8_1:44813583-44813602	Msa1196100:intron	40.0%
	ATCCAAAAGAAGTGGCACAT+GGG	+	chr8_1:44813624-44813643	None:intergenic	40.0%
	AATCCAAAAGAAGTGGCACA+TGG	+	chr8_1:44813625-44813644	None:intergenic	40.0%
	TTTGAAGAGCCGTTTGCATT+GGG	-	chr8_1:44813920-44813939	Msa1196100:intron	40.0%
	GTTTGCATTGGGAGTTTATG+TGG	-	chr8_1:44813931-44813950	Msa1196100:CDS	40.0%
	CACTGTTGTTGTCAGATTCA+AGG	-	chr8_1:44814108-44814127	Msa1196100:intron	40.0%
	GCGATAGCTCAAATGATTCA+TGG	-	chr8_1:44814527-44814546	Msa1196100:CDS	40.0%
	ATAGACACACGATTAACCGA+AGG	+	chr8_1:44814631-44814650	None:intergenic	40.0%
	TTCTGGTGGCTGTTATGTTA+TGG	-	chr8_1:44814743-44814762	Msa1196100:five_prime_UTR	40.0%
	CACCACCTTAAACAACAAAG+TGG	+	chr8_1:44814868-44814887	None:intergenic	40.0%
!!	TTTGTTGTTTAAGGTGGTGC+AGG	-	chr8_1:44814869-44814888	Msa1196100:five_prime_UTR	40.0%
!!	TTGTTGTTTAAGGTGGTGCA+GGG	-	chr8_1:44814870-44814889	Msa1196100:five_prime_UTR	40.0%
	GTGAGAAAGAAGGGAGAGAA+AGG	+	chr8_1:44813133-44813152	None:intergenic	45.0%
	CAGAGAAAGGAAGGAGATTG+AGG	+	chr8_1:44813203-44813222	None:intergenic	45.0%
!	CTCGTGTTGAAGGTGTGAAT+TGG	-	chr8_1:44813432-44813451	Msa1196100:CDS	45.0%
	GTAGTTGACAGCAAGAACAG+TGG	+	chr8_1:44813498-44813517	None:intergenic	45.0%
!!!	AACCCATGTGCCACTTCTTT+TGG	-	chr8_1:44813619-44813638	Msa1196100:intron	45.0%
	GTTTGAAGAGCCGTTTGCAT+TGG	-	chr8_1:44813919-44813938	Msa1196100:intron	45.0%
	GTTTATGTGGCGTTGTGAGA+AGG	-	chr8_1:44813944-44813963	Msa1196100:CDS	45.0%
	CATCAAACCCGCATCAGATT+TGG	+	chr8_1:44814318-44814337	None:intergenic	45.0%
	CAAATCTGATGCGGGTTTGA+TGG	-	chr8_1:44814316-44814335	Msa1196100:CDS	45.0%
	AGATGAATGGAATGAGGCAG+AGG	-	chr8_1:44814827-44814846	Msa1196100:five_prime_UTR	45.0%
	GCAGCTGATAGATAACTCAC+AGG	+	chr8_1:44814940-44814959	None:intergenic	45.0%
	GTGAGAAAGAAGGGAGAGAA+AGG	+	chr8_1:44813133-44813152	None:intergenic	45.0%
	CAGAGAAAGGAAGGAGATTG+AGG	+	chr8_1:44813203-44813222	None:intergenic	45.0%
!	CTCGTGTTGAAGGTGTGAAT+TGG	-	chr8_1:44813432-44813451	Msa1196100:CDS	45.0%
	GTAGTTGACAGCAAGAACAG+TGG	+	chr8_1:44813498-44813517	None:intergenic	45.0%
!!!	AACCCATGTGCCACTTCTTT+TGG	-	chr8_1:44813619-44813638	Msa1196100:intron	45.0%
	GTTTGAAGAGCCGTTTGCAT+TGG	-	chr8_1:44813919-44813938	Msa1196100:intron	45.0%
	GTTTATGTGGCGTTGTGAGA+AGG	-	chr8_1:44813944-44813963	Msa1196100:CDS	45.0%
	CATCAAACCCGCATCAGATT+TGG	+	chr8_1:44814318-44814337	None:intergenic	45.0%
	CAAATCTGATGCGGGTTTGA+TGG	-	chr8_1:44814316-44814335	Msa1196100:CDS	45.0%
	AGATGAATGGAATGAGGCAG+AGG	-	chr8_1:44814827-44814846	Msa1196100:five_prime_UTR	45.0%
	GCAGCTGATAGATAACTCAC+AGG	+	chr8_1:44814940-44814959	None:intergenic	45.0%
!	GGAAGGAGATGGAGCGTTTA+CGG	+	chr8_1:44812829-44812848	None:intergenic	50.0%
	GGTGAGGGATTCATCTTCGA+AGG	+	chr8_1:44813240-44813259	None:intergenic	50.0%
!	AGCAGATGGGTCGTTGGTAA+TGG	+	chr8_1:44813273-44813292	None:intergenic	50.0%
	CTTTGTAGCAGATGGGTCGT+TGG	+	chr8_1:44813279-44813298	None:intergenic	50.0%
	GCAGTAAGCTGAGTCATCCA+AGG	+	chr8_1:44813563-44813582	None:intergenic	50.0%
	GTAGCAGCAGCCAATGTAGA+AGG	+	chr8_1:44814152-44814171	None:intergenic	50.0%
	CAGATACGCGCTTACGTTTC+TGG	+	chr8_1:44814465-44814484	None:intergenic	50.0%
	CGTATCTGAACCAGGTAGTC+CGG	-	chr8_1:44814477-44814496	Msa1196100:CDS	50.0%
	GTATCTGAACCAGGTAGTCC+GGG	-	chr8_1:44814478-44814497	Msa1196100:CDS	50.0%
	GATGCATCAATGACACCACC+CGG	+	chr8_1:44814499-44814518	None:intergenic	50.0%
!	TTCATGGACTGCAGCATCGT+CGG	-	chr8_1:44814543-44814562	Msa1196100:CDS	50.0%
	GCTCTGCTCCTCTTGAACAT+CGG	+	chr8_1:44814586-44814605	None:intergenic	50.0%
!	GGAAGGAGATGGAGCGTTTA+CGG	+	chr8_1:44812829-44812848	None:intergenic	50.0%
	GGTGAGGGATTCATCTTCGA+AGG	+	chr8_1:44813240-44813259	None:intergenic	50.0%
!	AGCAGATGGGTCGTTGGTAA+TGG	+	chr8_1:44813273-44813292	None:intergenic	50.0%
	CTTTGTAGCAGATGGGTCGT+TGG	+	chr8_1:44813279-44813298	None:intergenic	50.0%
	GCAGTAAGCTGAGTCATCCA+AGG	+	chr8_1:44813563-44813582	None:intergenic	50.0%
	GTAGCAGCAGCCAATGTAGA+AGG	+	chr8_1:44814152-44814171	None:intergenic	50.0%
	CAGATACGCGCTTACGTTTC+TGG	+	chr8_1:44814465-44814484	None:intergenic	50.0%
	CGTATCTGAACCAGGTAGTC+CGG	-	chr8_1:44814477-44814496	Msa1196100:CDS	50.0%
	GTATCTGAACCAGGTAGTCC+GGG	-	chr8_1:44814478-44814497	Msa1196100:CDS	50.0%
	GATGCATCAATGACACCACC+CGG	+	chr8_1:44814499-44814518	None:intergenic	50.0%
!	TTCATGGACTGCAGCATCGT+CGG	-	chr8_1:44814543-44814562	Msa1196100:CDS	50.0%
	GCTCTGCTCCTCTTGAACAT+CGG	+	chr8_1:44814586-44814605	None:intergenic	50.0%
	AACGCTCCATCTCCTTCCCT+AGG	-	chr8_1:44812831-44812850	Msa1196100:three_prime_UTR	55.0%
	AACAGGCTGTTTGCCGCCTA+GGG	+	chr8_1:44812850-44812869	None:intergenic	55.0%
	AAACAGGCTGTTTGCCGCCT+AGG	+	chr8_1:44812851-44812870	None:intergenic	55.0%
	CGTAAGCGCGTATCTGAACC+AGG	-	chr8_1:44814469-44814488	Msa1196100:CDS	55.0%
	CACTGCAGCCGATGTTCAAG+AGG	-	chr8_1:44814575-44814594	Msa1196100:CDS	55.0%
	CCAGCAGATGCGATTGCCTT+CGG	-	chr8_1:44814612-44814631	Msa1196100:CDS	55.0%
	AACGCTCCATCTCCTTCCCT+AGG	-	chr8_1:44812831-44812850	Msa1196100:three_prime_UTR	55.0%
	AACAGGCTGTTTGCCGCCTA+GGG	+	chr8_1:44812850-44812869	None:intergenic	55.0%
	AAACAGGCTGTTTGCCGCCT+AGG	+	chr8_1:44812851-44812870	None:intergenic	55.0%
	CGTAAGCGCGTATCTGAACC+AGG	-	chr8_1:44814469-44814488	Msa1196100:CDS	55.0%
	CACTGCAGCCGATGTTCAAG+AGG	-	chr8_1:44814575-44814594	Msa1196100:CDS	55.0%
	CCAGCAGATGCGATTGCCTT+CGG	-	chr8_1:44814612-44814631	Msa1196100:CDS	55.0%
	GCTCCATCTCCTTCCCTAGG+CGG	-	chr8_1:44812834-44812853	Msa1196100:three_prime_UTR	60.0%
	TTGCCGCCTAGGGAAGGAGA+TGG	+	chr8_1:44812840-44812859	None:intergenic	60.0%
	TCTGAACCAGGTAGTCCGGG+TGG	-	chr8_1:44814481-44814500	Msa1196100:CDS	60.0%
	ATGACACCACCCGGACTACC+TGG	+	chr8_1:44814490-44814509	None:intergenic	60.0%
	CCGAAGGCAATCGCATCTGC+TGG	+	chr8_1:44814615-44814634	None:intergenic	60.0%
	GCTCCATCTCCTTCCCTAGG+CGG	-	chr8_1:44812834-44812853	Msa1196100:three_prime_UTR	60.0%
	TTGCCGCCTAGGGAAGGAGA+TGG	+	chr8_1:44812840-44812859	None:intergenic	60.0%
	TCTGAACCAGGTAGTCCGGG+TGG	-	chr8_1:44814481-44814500	Msa1196100:CDS	60.0%
	ATGACACCACCCGGACTACC+TGG	+	chr8_1:44814490-44814509	None:intergenic	60.0%
	CCGAAGGCAATCGCATCTGC+TGG	+	chr8_1:44814615-44814634	None:intergenic	60.0%
	GGCTGTTTGCCGCCTAGGGA+AGG	+	chr8_1:44812846-44812865	None:intergenic	65.0%
	GGCTGTTTGCCGCCTAGGGA+AGG	+	chr8_1:44812846-44812865	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_1	gene	44812818	44815093	44812818	ID=Msa1196100;Name=Msa1196100
chr8_1	mRNA	44812818	44815093	44812818	ID=Msa1196100-mRNA-1;Parent=Msa1196100;Name=Msa1196100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=373\|1\|1\|1\|1\|1\|4\|418\|359
chr8_1	exon	44812818	44813520	44812818	ID=Msa1196100-mRNA-1:exon:14428;Parent=Msa1196100-mRNA-1
chr8_1	exon	44813655	44813788	44813655	ID=Msa1196100-mRNA-1:exon:14427;Parent=Msa1196100-mRNA-1
chr8_1	exon	44813924	44814125	44813924	ID=Msa1196100-mRNA-1:exon:14426;Parent=Msa1196100-mRNA-1
chr8_1	exon	44814262	44815093	44814262	ID=Msa1196100-mRNA-1:exon:14425;Parent=Msa1196100-mRNA-1
chr8_1	five_prime_UTR	44814721	44815093	44814721	ID=Msa1196100-mRNA-1:five_prime_utr;Parent=Msa1196100-mRNA-1
chr8_1	CDS	44814262	44814720	44814262	ID=Msa1196100-mRNA-1:cds;Parent=Msa1196100-mRNA-1
chr8_1	CDS	44813924	44814125	44813924	ID=Msa1196100-mRNA-1:cds;Parent=Msa1196100-mRNA-1
chr8_1	CDS	44813655	44813788	44813655	ID=Msa1196100-mRNA-1:cds;Parent=Msa1196100-mRNA-1
chr8_1	CDS	44813236	44813520	44813236	ID=Msa1196100-mRNA-1:cds;Parent=Msa1196100-mRNA-1
chr8_1	three_prime_UTR	44812818	44813235	44812818	ID=Msa1196100-mRNA-1:three_prime_utr;Parent=Msa1196100-mRNA-1

Gene Sequence

>Msa1196100

ATGTCTCAACCTCAATCTCCTTCCTTTCTCTGTGAAGAACAAAACACCTTCGAAGATGAATCCCTCACCGATTCTGAAACCATTACCAACGACCCATCTGCTACAAAGCTTCAATCTTTATCGAATTTGTTCAACAATGATATGTTTTGGGAAGACGATGAAGTTCTTTCGTTAATCATGAAAGAGAAAGAAACCCATTTGATTAACGATGATTTTGTTATTGATGGATCTTTGAATGAGTCTCGTGTTGAAGGTGTGAATTGGCTTTCTAGAGTTTGTGCTCATTATGGGTTTTCTACTTTGACCACTGTTCTTGCTGTCAACTACTTTGATAGATTCGTTACTAGTTTGAAGTTTCAAAAGGATAAGCCTTGGATGACTCAGCTTACTGCTGTTGCTTGTTTGTCTCTTGCGGCTAAAATTGAAGAAACCCATGTGCCACTTCTTTTGGATTTTCAAGTTGAGGAATCTAGATTTGTGTTTGAAGCTAAAACTATACAAAGAATGGAGCTTTTGGTGTTATCTACATTGAAATGGAGGATGCATCCAGTGACACCAATTTCATTCTTTGAACACATTGTTAGAAGACTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAAGGTTCTTCTTCATGTCATTGTTGATTCAAGGGTTATGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTAATTAAAGAGATTGAACCATTTAATGCAACTGAGTACATTGAACAACTCTTGGGTTTACTAAAGATTAGTGAGGAACAAGTGAATCAGTGCTACAAACTTATGCTGAAGTTATTAGTTTGCGATGATGGCATTTACAGTCTTCACCAGAAACGTAAGCGCGTATCTGAACCAGGTAGTCCGGGTGGTGTCATTGATGCATCTTTCAGCTGCGATAGCTCAAATGATTCATGGACTGCAGCATCGTCGGTTTCACTTTCACTGCAGCCGATGTTCAAGAGGAGCAGAGCTCAAGACCAGCAGATGCGATTGCCTTCGGTTAATCGTGTGTCTATTGATGTTCTTCATAGCCCTCGTTAA

Protein sequence

>Msa1196100

MSQPQSPSFLCEEQNTFEDESLTDSETITNDPSATKLQSLSNLFNNDMFWEDDEVLSLIMKEKETHLINDDFVIDGSLNESRVEGVNWLSRVCAHYGFSTLTTVLAVNYFDRFVTSLKFQKDKPWMTQLTAVACLSLAAKIEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFMWRCEKVLLHVIVDSRVMMSYLPSTLAAATMIHVIKEIEPFNATEYIEQLLGLLKISEEQVNQCYKLMLKLLVCDDGIYSLHQKRKRVSEPGSPGGVIDASFSCDSSNDSWTAASSVSLSLQPMFKRSRAQDQQMRLPSVNRVSIDVLHSPR*