AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297300 MtrunA17_Chr4g0054411 87.638 542 30 3 1 520 1 527 0.0 944
Msa1297300 MtrunA17_Chr7g0266851 50.415 482 216 6 38 513 33 497 2.46e-173 498
Msa1297300 MtrunA17_Chr7g0266831 51.398 465 205 5 56 513 65 515 3.63e-172 496
Msa1297300 MtrunA17_Chr2g0320581 45.788 463 214 8 57 511 56 489 9.66e-134 397
Msa1297300 MtrunA17_Chr2g0315161 40.657 487 239 10 39 516 34 479 4.18e-116 351
Msa1297300 MtrunA17_Chr5g0405091 27.329 483 269 19 57 508 37 468 3.34e-25 108
Msa1297300 MtrunA17_Chr8g0372191 34.783 161 78 6 61 220 44 178 1.41e-14 72.0
Msa1297300 MtrunA17_Chr7g0216291 42.254 71 38 1 116 183 3 73 3.99e-13 65.1
Msa1297300 MtrunA17_Chr8g0372201 25.740 338 184 13 164 483 12 300 1.91e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297300 AT5G65760.1 69.783 460 123 2 53 510 55 500 0.0 685
Msa1297300 AT2G24280.1 54.262 481 198 6 39 515 29 491 0.0 540
Msa1297300 AT2G24280.2 53.664 423 174 6 39 457 29 433 7.58e-160 461
Msa1297300 AT5G22860.1 38.953 516 278 8 11 515 7 496 3.43e-113 345
Msa1297300 AT5G22860.4 38.655 476 255 8 11 475 7 456 6.59e-99 306
Msa1297300 AT5G22860.2 38.646 458 244 8 11 457 7 438 1.62e-92 289
Msa1297300 AT5G22860.3 38.646 458 244 8 11 457 7 438 1.62e-92 289
Msa1297300 AT5G22860.7 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1297300 AT5G22860.5 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1297300 AT5G22860.6 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1297300 AT5G22860.8 36.387 382 206 8 11 381 7 362 7.11e-65 215
Msa1297300 AT3G28680.1 36.486 148 82 3 206 351 23 160 2.66e-24 100
Msa1297300 AT2G18080.1 25.134 561 290 20 6 515 5 486 1.07e-22 101
Msa1297300 AT4G36190.1 38.983 177 80 6 60 229 49 204 2.70e-20 94.4
Msa1297300 AT4G36195.3 36.158 177 85 5 60 229 49 204 7.01e-20 93.2
Msa1297300 AT4G36195.1 36.158 177 85 5 60 229 49 204 7.01e-20 93.2
Msa1297300 AT4G36195.2 36.158 177 85 5 60 229 49 204 7.51e-20 92.8

Find 143 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTCCTGTTGTCTTATT+TGG 0.072346 8_3:-57380423 Msa1297300:CDS
TCTGAGTGGTTGGAACTTTC+AGG 0.128056 8_3:-57378082 Msa1297300:intron
GAAAATTTACCAAAGAATTT+TGG 0.166099 8_3:+57380984 None:intergenic
CATCTCACGTTGAGGAAATT+TGG 0.193930 8_3:-57377690 Msa1297300:CDS
AAACGGATTACTACAGTATT+TGG 0.208789 8_3:-57377827 Msa1297300:CDS
ATTACCACAATAGAGGAAAA+TGG 0.227615 8_3:+57380797 None:intergenic
GGAGTCTGCATATAGTTATT+TGG 0.239792 8_3:-57379440 Msa1297300:CDS
AATCACACTCCAAAATTCTT+TGG 0.253619 8_3:-57380993 Msa1297300:CDS
ATATTGTAGCATCGATATTA+TGG 0.254922 8_3:-57380579 Msa1297300:intron
AAGTATCCTCATATTGCTAT+TGG 0.255745 8_3:-57379919 Msa1297300:CDS
CTGACAAAATCTGAATGTTT+TGG 0.260595 8_3:+57379610 None:intergenic
ACAATGTCATAGAAAGTTTC+TGG 0.268432 8_3:+57379847 None:intergenic
AGTATCCTCATATTGCTATT+GGG 0.301189 8_3:-57379918 Msa1297300:CDS
TTCTCTTATCAACAGTTCTA+AGG 0.308499 8_3:-57377193 Msa1297300:three_prime_UTR
GAGTCGTTGTTGGAAGAATT+TGG 0.326045 8_3:+57380902 None:intergenic
CAAACACAACTTTATAGTTC+TGG 0.336508 8_3:+57377263 None:intergenic
TATAAGAATTCTTCCACGTT+AGG 0.340696 8_3:-57380522 Msa1297300:CDS
ACCTTATCAACACAGAAAAC+TGG 0.343571 8_3:-57380836 Msa1297300:CDS
TTTCTATTAATTCGAGTAAT+CGG 0.346274 8_3:-57380363 Msa1297300:intron
TTCAGAAAGTATTGTTTCTC+TGG 0.346716 8_3:-57377486 Msa1297300:CDS
ATCAAACTAACCTCCTTGAT+AGG 0.349096 8_3:+57379364 None:intergenic
CTAGTCTGAACAATACTTGC+AGG 0.354973 8_3:-57377155 Msa1297300:three_prime_UTR
TAAAGAGCACTGAAGATCTA+TGG 0.363172 8_3:-57379471 Msa1297300:CDS
GAGGATTGCCTCAAGAATTT+CGG 0.366801 8_3:-57377866 Msa1297300:CDS
TTGAAGCACGTAAATCTATA+TGG 0.371153 8_3:+57377365 None:intergenic
GAGTTCTTGATGCCTTTGCC+TGG 0.374134 8_3:-57379391 Msa1297300:CDS
TATGGTGAGTCTGTGCCTTT+TGG 0.378206 8_3:-57380561 Msa1297300:CDS
ATGTCTTCAAACTGAAGAAT+TGG 0.382835 8_3:+57379877 None:intergenic
AATACTGTAGTAATCCGTTT+TGG 0.384085 8_3:+57377830 None:intergenic
TGACTGTGACTGAGAGGGTT+TGG 0.407640 8_3:+57380953 None:intergenic
CCCTGCTGGGACTAGTATAC+TGG 0.409241 8_3:-57378187 Msa1297300:CDS
TCTCCTGTTGTCTTATTTGG+AGG 0.414863 8_3:-57380420 Msa1297300:CDS
GTCTTATTTGGAGGATCCTA+TGG 0.423762 8_3:-57380411 Msa1297300:CDS
TTCCTCTATTGTGGTAATGA+AGG 0.423767 8_3:-57380792 Msa1297300:CDS
GTGGAAACATGCTGAACTTT+CGG 0.431895 8_3:+57377918 None:intergenic
CAACAGTAAATGATCCTGAT+TGG 0.432368 8_3:-57377345 Msa1297300:CDS
TGGGAAATCGCTCCGAAGTT+CGG 0.435860 8_3:-57380732 Msa1297300:CDS
AGGATAGATAAAGGCCCTGC+TGG 0.440352 8_3:-57378201 Msa1297300:CDS
GAAGAGTAATTATACTCATA+TGG 0.449549 8_3:+57377896 None:intergenic
ATAAGAATTCTTCCACGTTA+GGG 0.456394 8_3:-57380521 Msa1297300:CDS
GAAAACTGGGTCGTTGGATC+GGG 0.458334 8_3:-57380822 Msa1297300:CDS
GTAATGAAGGTGACATTGTT+TGG 0.463623 8_3:-57380779 Msa1297300:CDS
CGAACTTACCTTAAAACCAT+TGG 0.465734 8_3:+57379822 None:intergenic
AATGTCTACTACAATTATAC+TGG 0.466025 8_3:-57378144 Msa1297300:CDS
TTACCACAATAGAGGAAAAT+GGG 0.471722 8_3:+57380798 None:intergenic
GATCCTCCAAATAAGACAAC+AGG 0.472975 8_3:+57380417 None:intergenic
GTCACAGTCACAGCCACAAT+TGG 0.473302 8_3:-57380940 Msa1297300:CDS
TTCTATGACATTGTTTCCAA+TGG 0.474249 8_3:-57379838 Msa1297300:CDS
GCTTCTTCTTTACTTCCAAA+AGG 0.475154 8_3:+57380546 None:intergenic
CAAATTTCCTCAACGTGAGA+TGG 0.478345 8_3:+57377691 None:intergenic
GTTTCTCTGGTGACTGAAGA+AGG 0.480434 8_3:-57377473 Msa1297300:intron
CTGCAAGTATTGTTCAGACT+AGG 0.483778 8_3:+57377156 None:intergenic
ATCAAGAACTCAGAAGGGTA+TGG 0.484345 8_3:+57379403 None:intergenic
GTTTGCAGAAGGATAGATAA+AGG 0.486472 8_3:-57378210 Msa1297300:CDS
CTTTGCTCTACCAACCAATC+AGG 0.487546 8_3:+57377331 None:intergenic
TGCATATAGTTATTTGGCAA+TGG 0.488874 8_3:-57379434 Msa1297300:CDS
TGTTGATAAGGTAGCGTTGA+GGG 0.492096 8_3:+57380847 None:intergenic
AGAAAACTGGGTCGTTGGAT+CGG 0.495530 8_3:-57380823 Msa1297300:CDS
CGCTCCGAAGTTCGGAGCCA+TGG 0.495989 8_3:-57380724 Msa1297300:CDS
ACCTCCTTGATAGGGTGTCC+AGG 0.498397 8_3:+57379373 None:intergenic
TGAAGTGGTCGAGTCGTTGT+TGG 0.499023 8_3:+57380892 None:intergenic
CAAATGGCCTATTGGATCCA+TGG 0.499366 8_3:-57377650 Msa1297300:CDS
TGATTGGTTGGTAGAGCAAA+GGG 0.504617 8_3:-57377329 Msa1297300:CDS
AGAGATTATGATGATAAGAG+TGG 0.506200 8_3:+57381040 None:intergenic
ATCCTCATGGTCTGAGTGGT+TGG 0.507139 8_3:-57378092 Msa1297300:CDS
CACCACTCCATGGATCCAAT+AGG 0.510198 8_3:+57377643 None:intergenic
GCACTGAAGATCTATGGAAC+TGG 0.510335 8_3:-57379465 Msa1297300:CDS
CACCTTCATTACCACAATAG+AGG 0.514961 8_3:+57380790 None:intergenic
ATGGGATGACATAGAATCAA+AGG 0.520719 8_3:-57379663 Msa1297300:CDS
GTATCCTCATATTGCTATTG+GGG 0.523000 8_3:-57379917 Msa1297300:CDS
TCCAGTATACTAGTCCCAGC+AGG 0.524915 8_3:+57378186 None:intergenic
TTAACTATATAAAGCAGTCA+TGG 0.526435 8_3:-57379682 Msa1297300:CDS
GTTTGGTTTGCTCAAAACAC+TGG 0.528202 8_3:-57380762 Msa1297300:CDS
GGTGTAGGCATGCACTGAAA+TGG 0.530351 8_3:-57377960 Msa1297300:intron
AACACAGAAAACTGGGTCGT+TGG 0.530504 8_3:-57380828 Msa1297300:CDS
GAGTGAAGCCAAGGCCAAAA+CGG 0.535816 8_3:-57377844 Msa1297300:CDS
TGGATCCATGGAGTGGTGGC+AGG 0.541273 8_3:-57377638 Msa1297300:intron
ACGACCATGGCTCCGAACTT+CGG 0.542721 8_3:+57380720 None:intergenic
TTTGCCTGGACACCCTATCA+AGG 0.543228 8_3:-57379377 Msa1297300:CDS
TAAGACAACAGGAGAAGCAT+TGG 0.545142 8_3:+57380428 None:intergenic
GTTTATCAGTGTTAGCAGCA+TGG 0.547154 8_3:-57379951 Msa1297300:intron
GGCTGTGACTGTGACTGAGA+GGG 0.554038 8_3:+57380948 None:intergenic
AAAGGCATCAAGAACTCAGA+AGG 0.554763 8_3:+57379397 None:intergenic
TTCTTGTTACTGATTTGAAG+CGG 0.554809 8_3:-57380461 Msa1297300:CDS
TCAAACTAACCTCCTTGATA+GGG 0.555408 8_3:+57379365 None:intergenic
AGTGCCCCAATAGCAATATG+AGG 0.558308 8_3:+57379913 None:intergenic
AGTAAATGATCCTGATTGGT+TGG 0.558556 8_3:-57377341 Msa1297300:CDS
CGGATTACTACAGTATTTGG+AGG 0.559733 8_3:-57377824 Msa1297300:CDS
TACTTTAACAGGTTTGCAGA+AGG 0.560532 8_3:-57378221 Msa1297300:intron
TGCAAGTATTGTTCAGACTA+GGG 0.564302 8_3:+57377157 None:intergenic
CCTTATCAACACAGAAAACT+GGG 0.566661 8_3:-57380835 Msa1297300:CDS
GCTTCACTCCGAAATTCTTG+AGG 0.566759 8_3:+57377858 None:intergenic
AATTCTTGAGGCAATCCTCT+CGG 0.568694 8_3:+57377870 None:intergenic
TGTGATTCAAAGCAAAAGCT+TGG 0.568802 8_3:+57381009 None:intergenic
TAACTATATAAAGCAGTCAT+GGG 0.569573 8_3:-57379681 Msa1297300:CDS
TTGTATTAGCTTGATCTCAG+TGG 0.571836 8_3:+57377306 None:intergenic
TATCACCTGCCACCACTCCA+TGG 0.573825 8_3:+57377633 None:intergenic
TCAAAGGGTCAAACAAGTGA+TGG 0.575197 8_3:-57379647 Msa1297300:CDS
TCAAGAACTCAGAAGGGTAT+GGG 0.576645 8_3:+57379404 None:intergenic
TTGATAGGGTGTCCAGGCAA+AGG 0.578962 8_3:+57379379 None:intergenic
GAGCGTCTTACTTCCACCAT+AGG 0.579660 8_3:+57380395 None:intergenic
CTGATTGGTTGGTAGAGCAA+AGG 0.582278 8_3:-57377330 Msa1297300:CDS
GGATAGATAAAGGCCCTGCT+GGG 0.583277 8_3:-57378200 Msa1297300:CDS
TGGGATGACATAGAATCAAA+GGG 0.588685 8_3:-57379662 Msa1297300:CDS
TTGTTCAGACTAGGGAGGGT+GGG 0.592132 8_3:+57377165 None:intergenic
TGGCTGTGACTGTGACTGAG+AGG 0.592599 8_3:+57380947 None:intergenic
GGAAGAATTTGGTTTCGTAG+TGG 0.598470 8_3:+57380913 None:intergenic
GAACTGGATGATGATCCTCA+TGG 0.603016 8_3:-57378105 Msa1297300:CDS
TGAAGATCTATGGAACTGGT+TGG 0.604641 8_3:-57379461 Msa1297300:CDS
TAGTCTGAACAATACTTGCA+GGG 0.605126 8_3:-57377154 Msa1297300:three_prime_UTR
ATTGTTCAGACTAGGGAGGG+TGG 0.606445 8_3:+57377164 None:intergenic
AGATCAAGCTAATACAAGGA+TGG 0.611530 8_3:-57377300 Msa1297300:CDS
TTATTTGGAGGATCCTATGG+TGG 0.613532 8_3:-57380408 Msa1297300:CDS
TCGTAGTGGATATCCAATTG+TGG 0.615599 8_3:+57380927 None:intergenic
TGTGTGTGTATATAACTGAC+TGG 0.616188 8_3:-57377103 Msa1297300:three_prime_UTR
CTATTGGATCCATGGAGTGG+TGG 0.619177 8_3:-57377642 Msa1297300:CDS
ATACTGGAGCGCATATACGA+GGG 0.620335 8_3:-57378171 Msa1297300:CDS
TAAATATCTCAAACGCAACA+CGG 0.620681 8_3:-57381120 Msa1297300:five_prime_UTR
AGAATTTCGGAGTGAAGCCA+AGG 0.621803 8_3:-57377853 Msa1297300:CDS
GAGTAATTATACTCATATGG+TGG 0.629068 8_3:+57377899 None:intergenic
AGTATTGTTCAGACTAGGGA+GGG 0.630037 8_3:+57377161 None:intergenic
ACTGAGATCAAGCTAATACA+AGG 0.630890 8_3:-57377304 Msa1297300:CDS
AACTTTCGGCTGCTAGACAT+CGG 0.635841 8_3:+57377932 None:intergenic
TAATTACTCTTCTTTCCGAG+AGG 0.643189 8_3:-57377885 Msa1297300:CDS
TATACTGGAGCGCATATACG+AGG 0.643510 8_3:-57378172 Msa1297300:CDS
GGATTACTACAGTATTTGGA+GGG 0.644022 8_3:-57377823 Msa1297300:CDS
GATGATCCTCATGGTCTGAG+TGG 0.655248 8_3:-57378096 Msa1297300:CDS
TACTCGAATTAATAGAAACA+AGG 0.655715 8_3:+57380368 None:intergenic
AAGTATTGTTCAGACTAGGG+AGG 0.662354 8_3:+57377160 None:intergenic
TACTTCGGGGAAAACGACCA+TGG 0.663338 8_3:+57380707 None:intergenic
TACTGGAGCGCATATACGAG+GGG 0.663470 8_3:-57378170 Msa1297300:CDS
AGAATATCCATCTCACGTTG+AGG 0.666478 8_3:-57377698 Msa1297300:CDS
GTGTTGATAAGGTAGCGTTG+AGG 0.684679 8_3:+57380846 None:intergenic
AAGGCATCAAGAACTCAGAA+GGG 0.686106 8_3:+57379398 None:intergenic
TTCCAACCACTCAGACCATG+AGG 0.689493 8_3:+57378090 None:intergenic
GCCTGGACACCCTATCAAGG+AGG 0.690287 8_3:-57379374 Msa1297300:intron
CCAGTATACTAGTCCCAGCA+GGG 0.691394 8_3:+57378187 None:intergenic
AAGAGTGGAAATGAGTGTTG+TGG 0.695653 8_3:+57381055 None:intergenic
ATGTCATAGAAAGTTTCTGG+TGG 0.697736 8_3:+57379850 None:intergenic
GGCCTATTGGATCCATGGAG+TGG 0.702021 8_3:-57377645 Msa1297300:CDS
AGCATTAAGATACCCTAACG+TGG 0.721288 8_3:+57380509 None:intergenic
ACTGGAGCGCATATACGAGG+GGG 0.737840 8_3:-57378169 Msa1297300:CDS
GTAGCGTTGAGGGAACGTAG+AGG 0.740430 8_3:+57380857 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATCTAATTATGTTAAC+TGG - chr8_3:57377589-57377608 Msa1297300:intron 15.0%
!!! CACTTTTACTAATTTAATAA+AGG + chr8_3:57378008-57378027 None:intergenic 15.0%
!!! ATATTTTTAATTGAGTTTGA+TGG + chr8_3:57378077-57378096 None:intergenic 15.0%
!! CAAACTCAATTAAAAATATT+CGG - chr8_3:57378078-57378097 Msa1297300:intron 15.0%
!! TATAAAAAAATATCATCAGT+AGG + chr8_3:57379430-57379449 None:intergenic 15.0%
!! AAATACTAAATCAATTGATA+AGG - chr8_3:57379475-57379494 Msa1297300:CDS 15.0%
!!! TGCTTAATTACTTTTTTTTA+GGG + chr8_3:57379812-57379831 None:intergenic 15.0%
!!! TTGCTTAATTACTTTTTTTT+AGG + chr8_3:57379813-57379832 None:intergenic 15.0%
!!! ATTTTTAATTTCCGTTAATT+AGG + chr8_3:57379838-57379857 None:intergenic 15.0%
!! TCTTATATATATACTTTAAC+AGG - chr8_3:57379976-57379995 Msa1297300:intron 15.0%
!! AAACAATATAACAAAGATAT+TGG + chr8_3:57380615-57380634 None:intergenic 15.0%
!! TATTATCTAATTATGTTAAC+TGG - chr8_3:57377589-57377608 Msa1297300:intron 15.0%
!!! CACTTTTACTAATTTAATAA+AGG + chr8_3:57378008-57378027 None:intergenic 15.0%
!!! ATATTTTTAATTGAGTTTGA+TGG + chr8_3:57378077-57378096 None:intergenic 15.0%
!! CAAACTCAATTAAAAATATT+CGG - chr8_3:57378078-57378097 Msa1297300:intron 15.0%
!! TATAAAAAAATATCATCAGT+AGG + chr8_3:57379430-57379449 None:intergenic 15.0%
!! AAATACTAAATCAATTGATA+AGG - chr8_3:57379475-57379494 Msa1297300:CDS 15.0%
!!! TGCTTAATTACTTTTTTTTA+GGG + chr8_3:57379812-57379831 None:intergenic 15.0%
!!! TTGCTTAATTACTTTTTTTT+AGG + chr8_3:57379813-57379832 None:intergenic 15.0%
!!! ATTTTTAATTTCCGTTAATT+AGG + chr8_3:57379838-57379857 None:intergenic 15.0%
!! TCTTATATATATACTTTAAC+AGG - chr8_3:57379976-57379995 Msa1297300:intron 15.0%
!! AAACAATATAACAAAGATAT+TGG + chr8_3:57380615-57380634 None:intergenic 15.0%
!!! GAAAATTTACCAAAGAATTT+TGG + chr8_3:57377227-57377246 None:intergenic 20.0%
!!! CTTTCTCTTATATTTAAAAC+CGG + chr8_3:57377551-57377570 None:intergenic 20.0%
!! TTTCTATTAATTCGAGTAAT+CGG - chr8_3:57377845-57377864 Msa1297300:CDS 20.0%
!!! TAGTCTTTTTAGTTTCAAAT+TGG - chr8_3:57377981-57378000 Msa1297300:intron 20.0%
!! ATTAAGCAAATCCTAATTAA+CGG - chr8_3:57379824-57379843 Msa1297300:intron 20.0%
!!! AGAAAACAAATTTGGAATAA+TGG + chr8_3:57379877-57379896 None:intergenic 20.0%
!! AAAGAAGAAGAAAACAAATT+TGG + chr8_3:57379885-57379904 None:intergenic 20.0%
!! AATCAAAGATTAATGCTATT+TGG + chr8_3:57380206-57380225 None:intergenic 20.0%
!! TCAAATTATGAATAATCGAA+TGG + chr8_3:57380766-57380785 None:intergenic 20.0%
!!! TTTTTTCATCTTATATTCTC+AGG - chr8_3:57380814-57380833 Msa1297300:CDS 20.0%
!!! GAAAATTTACCAAAGAATTT+TGG + chr8_3:57377227-57377246 None:intergenic 20.0%
!!! CTTTCTCTTATATTTAAAAC+CGG + chr8_3:57377551-57377570 None:intergenic 20.0%
!! TTTCTATTAATTCGAGTAAT+CGG - chr8_3:57377845-57377864 Msa1297300:CDS 20.0%
!!! TAGTCTTTTTAGTTTCAAAT+TGG - chr8_3:57377981-57378000 Msa1297300:intron 20.0%
!! ATTAAGCAAATCCTAATTAA+CGG - chr8_3:57379824-57379843 Msa1297300:intron 20.0%
!!! AGAAAACAAATTTGGAATAA+TGG + chr8_3:57379877-57379896 None:intergenic 20.0%
!! AAAGAAGAAGAAAACAAATT+TGG + chr8_3:57379885-57379904 None:intergenic 20.0%
!! AATCAAAGATTAATGCTATT+TGG + chr8_3:57380206-57380225 None:intergenic 20.0%
!! TCAAATTATGAATAATCGAA+TGG + chr8_3:57380766-57380785 None:intergenic 20.0%
!!! TTTTTTCATCTTATATTCTC+AGG - chr8_3:57380814-57380833 Msa1297300:CDS 20.0%
!!! ATATTGTAGCATCGATATTA+TGG - chr8_3:57377629-57377648 Msa1297300:intron 25.0%
! TACTCGAATTAATAGAAACA+AGG + chr8_3:57377843-57377862 None:intergenic 25.0%
!! TTTTCGTTTAACGTTTGTAT+CGG - chr8_3:57377947-57377966 Msa1297300:CDS 25.0%
!!! TAAAAATATTCGGTGTTTTG+CGG - chr8_3:57378088-57378107 Msa1297300:CDS 25.0%
!!! ATTAGTTTGCGGTTTTATTT+TGG - chr8_3:57378126-57378145 Msa1297300:CDS 25.0%
!!! ATTGTTGATGTTAGTTTTTC+TGG - chr8_3:57378417-57378436 Msa1297300:intron 25.0%
! TTAACTATATAAAGCAGTCA+TGG - chr8_3:57378526-57378545 Msa1297300:intron 25.0%
! TAACTATATAAAGCAGTCAT+GGG - chr8_3:57378527-57378546 Msa1297300:intron 25.0%
! GAAGGAATTAAATTATGTTG+TGG - chr8_3:57379213-57379232 Msa1297300:intron 25.0%
!!! TTGTTTCTTGCTTTTACAAA+AGG + chr8_3:57379286-57379305 None:intergenic 25.0%
!!! ACATGCAAGAAATCATTTTT+AGG + chr8_3:57379347-57379366 None:intergenic 25.0%
! CTAAAATGGTAGATTAGTAT+TGG + chr8_3:57379375-57379394 None:intergenic 25.0%
!! ATACTAATCTACCATTTTAG+AGG - chr8_3:57379375-57379394 Msa1297300:CDS 25.0%
!!! TACTTTTTTTTAGGGTAAAC+TGG + chr8_3:57379804-57379823 None:intergenic 25.0%
!! ACAAATTTGGAATAATGGTT+AGG + chr8_3:57379872-57379891 None:intergenic 25.0%
! AATGTCTACTACAATTATAC+TGG - chr8_3:57380064-57380083 Msa1297300:intron 25.0%
! GAAGAGTAATTATACTCATA+TGG + chr8_3:57380315-57380334 None:intergenic 25.0%
! TAATATCACAACAATGGAAA+TGG + chr8_3:57380445-57380464 None:intergenic 25.0%
!! AGCAACATAATTTTCTCAAA+TGG - chr8_3:57380542-57380561 Msa1297300:CDS 25.0%
!!! ATATTGTAGCATCGATATTA+TGG - chr8_3:57377629-57377648 Msa1297300:intron 25.0%
! TACTCGAATTAATAGAAACA+AGG + chr8_3:57377843-57377862 None:intergenic 25.0%
!! TTTTCGTTTAACGTTTGTAT+CGG - chr8_3:57377947-57377966 Msa1297300:CDS 25.0%
!!! TAAAAATATTCGGTGTTTTG+CGG - chr8_3:57378088-57378107 Msa1297300:CDS 25.0%
!!! ATTAGTTTGCGGTTTTATTT+TGG - chr8_3:57378126-57378145 Msa1297300:CDS 25.0%
!!! ATTGTTGATGTTAGTTTTTC+TGG - chr8_3:57378417-57378436 Msa1297300:intron 25.0%
! TTAACTATATAAAGCAGTCA+TGG - chr8_3:57378526-57378545 Msa1297300:intron 25.0%
! TAACTATATAAAGCAGTCAT+GGG - chr8_3:57378527-57378546 Msa1297300:intron 25.0%
! GAAGGAATTAAATTATGTTG+TGG - chr8_3:57379213-57379232 Msa1297300:intron 25.0%
!!! TTGTTTCTTGCTTTTACAAA+AGG + chr8_3:57379286-57379305 None:intergenic 25.0%
!!! ACATGCAAGAAATCATTTTT+AGG + chr8_3:57379347-57379366 None:intergenic 25.0%
! CTAAAATGGTAGATTAGTAT+TGG + chr8_3:57379375-57379394 None:intergenic 25.0%
!! ATACTAATCTACCATTTTAG+AGG - chr8_3:57379375-57379394 Msa1297300:CDS 25.0%
!!! TACTTTTTTTTAGGGTAAAC+TGG + chr8_3:57379804-57379823 None:intergenic 25.0%
!! ACAAATTTGGAATAATGGTT+AGG + chr8_3:57379872-57379891 None:intergenic 25.0%
! AATGTCTACTACAATTATAC+TGG - chr8_3:57380064-57380083 Msa1297300:intron 25.0%
! GAAGAGTAATTATACTCATA+TGG + chr8_3:57380315-57380334 None:intergenic 25.0%
! TAATATCACAACAATGGAAA+TGG + chr8_3:57380445-57380464 None:intergenic 25.0%
!! AGCAACATAATTTTCTCAAA+TGG - chr8_3:57380542-57380561 Msa1297300:CDS 25.0%
TAAATATCTCAAACGCAACA+CGG - chr8_3:57377088-57377107 Msa1297300:three_prime_UTR 30.0%
AGTTCAGTACTTGTCAAAAA+TGG - chr8_3:57377115-57377134 Msa1297300:three_prime_UTR 30.0%
AGAGATTATGATGATAAGAG+TGG + chr8_3:57377171-57377190 None:intergenic 30.0%
AATCACACTCCAAAATTCTT+TGG - chr8_3:57377215-57377234 Msa1297300:three_prime_UTR 30.0%
TTACCACAATAGAGGAAAAT+GGG + chr8_3:57377413-57377432 None:intergenic 30.0%
ATTACCACAATAGAGGAAAA+TGG + chr8_3:57377414-57377433 None:intergenic 30.0%
!!! TCAAAACACTGGTTTTGTTT+GGG - chr8_3:57377457-57377476 Msa1297300:intron 30.0%
! TCTCTTATATTTAAAACCGG+AGG + chr8_3:57377548-57377567 None:intergenic 30.0%
TATAAGAATTCTTCCACGTT+AGG - chr8_3:57377686-57377705 Msa1297300:CDS 30.0%
ATAAGAATTCTTCCACGTTA+GGG - chr8_3:57377687-57377706 Msa1297300:CDS 30.0%
!! TTCTTGTTACTGATTTGAAG+CGG - chr8_3:57377747-57377766 Msa1297300:intron 30.0%
AATTGAGTTTGATGGAAAGA+GGG + chr8_3:57378069-57378088 None:intergenic 30.0%
TAATTGAGTTTGATGGAAAG+AGG + chr8_3:57378070-57378089 None:intergenic 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr8_3:57378131-57378150 Msa1297300:CDS 30.0%
!!! TTATGCTGATGTTGTTTTGT+TGG - chr8_3:57378235-57378254 Msa1297300:intron 30.0%
AAGTATCCTCATATTGCTAT+TGG - chr8_3:57378289-57378308 Msa1297300:intron 30.0%
! AGTATCCTCATATTGCTATT+GGG - chr8_3:57378290-57378309 Msa1297300:intron 30.0%
ATGTCTTCAAACTGAAGAAT+TGG + chr8_3:57378334-57378353 None:intergenic 30.0%
ACAATGTCATAGAAAGTTTC+TGG + chr8_3:57378364-57378383 None:intergenic 30.0%
TTCTATGACATTGTTTCCAA+TGG - chr8_3:57378370-57378389 Msa1297300:intron 30.0%
!! CATTGTTTCCAATGGTTTTA+AGG - chr8_3:57378378-57378397 Msa1297300:intron 30.0%
!!! ATGTTTTGGTAAGAAGTTCA+AGG + chr8_3:57378587-57378606 None:intergenic 30.0%
! CTGACAAAATCTGAATGTTT+TGG + chr8_3:57378601-57378620 None:intergenic 30.0%
! TTAGTTTAACTGCTTGTTGA+AGG - chr8_3:57378710-57378729 Msa1297300:intron 30.0%
TGCATATAGTTATTTGGCAA+TGG - chr8_3:57378774-57378793 Msa1297300:intron 30.0%
TGATAGAATAGTTAACAGTG+CGG + chr8_3:57378906-57378925 None:intergenic 30.0%
AGCATCATAAAAAACAGTCA+AGG + chr8_3:57378938-57378957 None:intergenic 30.0%
! TTAATCTGTAGCCTCTAAAA+TGG + chr8_3:57379389-57379408 None:intergenic 30.0%
!! ATATCATCAGTAGGTTGATT+AGG + chr8_3:57379421-57379440 None:intergenic 30.0%
TTTAACGTTGTTCTATTCCT+AGG + chr8_3:57379699-57379718 None:intergenic 30.0%
!! AGAAGCTAAATGTTTTGAAC+TGG - chr8_3:57380087-57380106 Msa1297300:intron 30.0%
GAGTAATTATACTCATATGG+TGG + chr8_3:57380312-57380331 None:intergenic 30.0%
! AATACTGTAGTAATCCGTTT+TGG + chr8_3:57380381-57380400 None:intergenic 30.0%
!! AAACGGATTACTACAGTATT+TGG - chr8_3:57380381-57380400 Msa1297300:CDS 30.0%
AGAGCATAATATCACAACAA+TGG + chr8_3:57380451-57380470 None:intergenic 30.0%
TTTCCAGTCACATAAATAAC+AGG + chr8_3:57380479-57380498 None:intergenic 30.0%
! AATTTTCTCAAATGGCCTAT+TGG - chr8_3:57380550-57380569 Msa1297300:CDS 30.0%
! CAGCAAGCAATAATGTTTTA+CGG - chr8_3:57380645-57380664 Msa1297300:intron 30.0%
!! TTCAGAAAGTATTGTTTCTC+TGG - chr8_3:57380722-57380741 Msa1297300:CDS 30.0%
TTGAAGCACGTAAATCTATA+TGG + chr8_3:57380846-57380865 None:intergenic 30.0%
CAAACACAACTTTATAGTTC+TGG + chr8_3:57380948-57380967 None:intergenic 30.0%
TTCTCTTATCAACAGTTCTA+AGG - chr8_3:57381015-57381034 Msa1297300:CDS 30.0%
TAAATATCTCAAACGCAACA+CGG - chr8_3:57377088-57377107 Msa1297300:three_prime_UTR 30.0%
AGTTCAGTACTTGTCAAAAA+TGG - chr8_3:57377115-57377134 Msa1297300:three_prime_UTR 30.0%
AGAGATTATGATGATAAGAG+TGG + chr8_3:57377171-57377190 None:intergenic 30.0%
AATCACACTCCAAAATTCTT+TGG - chr8_3:57377215-57377234 Msa1297300:three_prime_UTR 30.0%
TTACCACAATAGAGGAAAAT+GGG + chr8_3:57377413-57377432 None:intergenic 30.0%
ATTACCACAATAGAGGAAAA+TGG + chr8_3:57377414-57377433 None:intergenic 30.0%
!!! TCAAAACACTGGTTTTGTTT+GGG - chr8_3:57377457-57377476 Msa1297300:intron 30.0%
! TCTCTTATATTTAAAACCGG+AGG + chr8_3:57377548-57377567 None:intergenic 30.0%
TATAAGAATTCTTCCACGTT+AGG - chr8_3:57377686-57377705 Msa1297300:CDS 30.0%
ATAAGAATTCTTCCACGTTA+GGG - chr8_3:57377687-57377706 Msa1297300:CDS 30.0%
!! TTCTTGTTACTGATTTGAAG+CGG - chr8_3:57377747-57377766 Msa1297300:intron 30.0%
AATTGAGTTTGATGGAAAGA+GGG + chr8_3:57378069-57378088 None:intergenic 30.0%
TAATTGAGTTTGATGGAAAG+AGG + chr8_3:57378070-57378089 None:intergenic 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr8_3:57378131-57378150 Msa1297300:CDS 30.0%
!!! TTATGCTGATGTTGTTTTGT+TGG - chr8_3:57378235-57378254 Msa1297300:intron 30.0%
AAGTATCCTCATATTGCTAT+TGG - chr8_3:57378289-57378308 Msa1297300:intron 30.0%
! AGTATCCTCATATTGCTATT+GGG - chr8_3:57378290-57378309 Msa1297300:intron 30.0%
ATGTCTTCAAACTGAAGAAT+TGG + chr8_3:57378334-57378353 None:intergenic 30.0%
ACAATGTCATAGAAAGTTTC+TGG + chr8_3:57378364-57378383 None:intergenic 30.0%
TTCTATGACATTGTTTCCAA+TGG - chr8_3:57378370-57378389 Msa1297300:intron 30.0%
!! CATTGTTTCCAATGGTTTTA+AGG - chr8_3:57378378-57378397 Msa1297300:intron 30.0%
!!! ATGTTTTGGTAAGAAGTTCA+AGG + chr8_3:57378587-57378606 None:intergenic 30.0%
! CTGACAAAATCTGAATGTTT+TGG + chr8_3:57378601-57378620 None:intergenic 30.0%
! TTAGTTTAACTGCTTGTTGA+AGG - chr8_3:57378710-57378729 Msa1297300:intron 30.0%
TGCATATAGTTATTTGGCAA+TGG - chr8_3:57378774-57378793 Msa1297300:intron 30.0%
TGATAGAATAGTTAACAGTG+CGG + chr8_3:57378906-57378925 None:intergenic 30.0%
AGCATCATAAAAAACAGTCA+AGG + chr8_3:57378938-57378957 None:intergenic 30.0%
! TTAATCTGTAGCCTCTAAAA+TGG + chr8_3:57379389-57379408 None:intergenic 30.0%
!! ATATCATCAGTAGGTTGATT+AGG + chr8_3:57379421-57379440 None:intergenic 30.0%
TTTAACGTTGTTCTATTCCT+AGG + chr8_3:57379699-57379718 None:intergenic 30.0%
!! AGAAGCTAAATGTTTTGAAC+TGG - chr8_3:57380087-57380106 Msa1297300:intron 30.0%
GAGTAATTATACTCATATGG+TGG + chr8_3:57380312-57380331 None:intergenic 30.0%
! AATACTGTAGTAATCCGTTT+TGG + chr8_3:57380381-57380400 None:intergenic 30.0%
!! AAACGGATTACTACAGTATT+TGG - chr8_3:57380381-57380400 Msa1297300:CDS 30.0%
AGAGCATAATATCACAACAA+TGG + chr8_3:57380451-57380470 None:intergenic 30.0%
TTTCCAGTCACATAAATAAC+AGG + chr8_3:57380479-57380498 None:intergenic 30.0%
! AATTTTCTCAAATGGCCTAT+TGG - chr8_3:57380550-57380569 Msa1297300:CDS 30.0%
! CAGCAAGCAATAATGTTTTA+CGG - chr8_3:57380645-57380664 Msa1297300:intron 30.0%
!! TTCAGAAAGTATTGTTTCTC+TGG - chr8_3:57380722-57380741 Msa1297300:CDS 30.0%
TTGAAGCACGTAAATCTATA+TGG + chr8_3:57380846-57380865 None:intergenic 30.0%
CAAACACAACTTTATAGTTC+TGG + chr8_3:57380948-57380967 None:intergenic 30.0%
TTCTCTTATCAACAGTTCTA+AGG - chr8_3:57381015-57381034 Msa1297300:CDS 30.0%
TGTGATTCAAAGCAAAAGCT+TGG + chr8_3:57377202-57377221 None:intergenic 35.0%
ACCTTATCAACACAGAAAAC+TGG - chr8_3:57377372-57377391 Msa1297300:CDS 35.0%
CCTTATCAACACAGAAAACT+GGG - chr8_3:57377373-57377392 Msa1297300:CDS 35.0%
! TTCCTCTATTGTGGTAATGA+AGG - chr8_3:57377416-57377435 Msa1297300:intron 35.0%
GTAATGAAGGTGACATTGTT+TGG - chr8_3:57377429-57377448 Msa1297300:intron 35.0%
!!! CTCAAAACACTGGTTTTGTT+TGG - chr8_3:57377456-57377475 Msa1297300:intron 35.0%
ACAGAGTATGACACTTACTT+CGG + chr8_3:57377519-57377538 None:intergenic 35.0%
GCTTCTTCTTTACTTCCAAA+AGG + chr8_3:57377665-57377684 None:intergenic 35.0%
TGACAACGTTTCATGAATCT+AGG + chr8_3:57377882-57377901 None:intergenic 35.0%
! TTTTGCGGTTTTCGGTTTTT+TGG - chr8_3:57378103-57378122 Msa1297300:CDS 35.0%
!!! CGGTTTTTTGGATTAGTTTG+CGG - chr8_3:57378115-57378134 Msa1297300:CDS 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr8_3:57378136-57378155 Msa1297300:CDS 35.0%
! GTATCCTCATATTGCTATTG+GGG - chr8_3:57378291-57378310 Msa1297300:intron 35.0%
! ATGTCATAGAAAGTTTCTGG+TGG + chr8_3:57378361-57378380 None:intergenic 35.0%
CGAACTTACCTTAAAACCAT+TGG + chr8_3:57378389-57378408 None:intergenic 35.0%
ATGGGATGACATAGAATCAA+AGG - chr8_3:57378545-57378564 Msa1297300:intron 35.0%
TGGGATGACATAGAATCAAA+GGG - chr8_3:57378546-57378565 Msa1297300:intron 35.0%
!! TAAAGAGCACTGAAGATCTA+TGG - chr8_3:57378737-57378756 Msa1297300:intron 35.0%
GGAGTCTGCATATAGTTATT+TGG - chr8_3:57378768-57378787 Msa1297300:intron 35.0%
TCAAACTAACCTCCTTGATA+GGG + chr8_3:57378846-57378865 None:intergenic 35.0%
ATCAAACTAACCTCCTTGAT+AGG + chr8_3:57378847-57378866 None:intergenic 35.0%
!!! ACTGTTTTTTATGATGCTGC+TGG - chr8_3:57378940-57378959 Msa1297300:intron 35.0%
!!! CTGTTTTTTATGATGCTGCT+GGG - chr8_3:57378941-57378960 Msa1297300:intron 35.0%
! TGCTGGGAAATTGACTTTAA+TGG - chr8_3:57378957-57378976 Msa1297300:intron 35.0%
! TGGGAAATTGACTTTAATGG+TGG - chr8_3:57378960-57378979 Msa1297300:intron 35.0%
! CTAGCAGTGTTGTTAAATAG+TGG - chr8_3:57378989-57379008 Msa1297300:intron 35.0%
GTAGAAAACAGTAGCTATAG+CGG - chr8_3:57379084-57379103 Msa1297300:intron 35.0%
!! GGTTTACAATACTGGTTTCT+AGG - chr8_3:57379164-57379183 Msa1297300:intron 35.0%
! CTGGTTTCTAGGAATATGTT+TGG - chr8_3:57379175-57379194 Msa1297300:intron 35.0%
!! TTATAAACCCAAGAGTGCTA+GGG - chr8_3:57379631-57379650 Msa1297300:CDS 35.0%
CGTTAAACTTAAAACTCTCG+AGG - chr8_3:57379712-57379731 Msa1297300:intron 35.0%
AAACTTAAAACTCTCGAGGT+AGG - chr8_3:57379716-57379735 Msa1297300:intron 35.0%
AACTTAAAACTCTCGAGGTA+GGG - chr8_3:57379717-57379736 Msa1297300:intron 35.0%
AAGATAGTCAGATTCCTTTC+TGG + chr8_3:57379950-57379969 None:intergenic 35.0%
TACTTTAACAGGTTTGCAGA+AGG - chr8_3:57379987-57380006 Msa1297300:intron 35.0%
GTTTGCAGAAGGATAGATAA+AGG - chr8_3:57379998-57380017 Msa1297300:intron 35.0%
! TGTTTTTCCTTAGTTGTTGC+TGG - chr8_3:57380167-57380186 Msa1297300:intron 35.0%
TACTTATCCAGCAACAACTA+AGG + chr8_3:57380177-57380196 None:intergenic 35.0%
! ATTCCATCTTTTCTTGTCCA+TGG - chr8_3:57380227-57380246 Msa1297300:intron 35.0%
TAATTACTCTTCTTTCCGAG+AGG - chr8_3:57380323-57380342 Msa1297300:intron 35.0%
GGATTACTACAGTATTTGGA+GGG - chr8_3:57380385-57380404 Msa1297300:CDS 35.0%
! TCACCTGTTATTTATGTGAC+TGG - chr8_3:57380473-57380492 Msa1297300:CDS 35.0%
CGTAAAACATTATTGCTTGC+TGG + chr8_3:57380647-57380666 None:intergenic 35.0%
! CAAGCAATAATGTTTTACGG+TGG - chr8_3:57380648-57380667 Msa1297300:intron 35.0%
!! AATTTGACTTGTCTGTTGCA+TGG - chr8_3:57380779-57380798 Msa1297300:CDS 35.0%
CAACAGTAAATGATCCTGAT+TGG - chr8_3:57380863-57380882 Msa1297300:CDS 35.0%
AGTAAATGATCCTGATTGGT+TGG - chr8_3:57380867-57380886 Msa1297300:CDS 35.0%
! TTGTATTAGCTTGATCTCAG+TGG + chr8_3:57380905-57380924 None:intergenic 35.0%
ACTGAGATCAAGCTAATACA+AGG - chr8_3:57380904-57380923 Msa1297300:CDS 35.0%
AGATCAAGCTAATACAAGGA+TGG - chr8_3:57380908-57380927 Msa1297300:CDS 35.0%
! TGCAAGTATTGTTCAGACTA+GGG + chr8_3:57381054-57381073 None:intergenic 35.0%
TAGTCTGAACAATACTTGCA+GGG - chr8_3:57381054-57381073 Msa1297300:CDS 35.0%
TGTGTGTGTATATAACTGAC+TGG - chr8_3:57381105-57381124 Msa1297300:five_prime_UTR 35.0%
TGTGATTCAAAGCAAAAGCT+TGG + chr8_3:57377202-57377221 None:intergenic 35.0%
ACCTTATCAACACAGAAAAC+TGG - chr8_3:57377372-57377391 Msa1297300:CDS 35.0%
CCTTATCAACACAGAAAACT+GGG - chr8_3:57377373-57377392 Msa1297300:CDS 35.0%
! TTCCTCTATTGTGGTAATGA+AGG - chr8_3:57377416-57377435 Msa1297300:intron 35.0%
GTAATGAAGGTGACATTGTT+TGG - chr8_3:57377429-57377448 Msa1297300:intron 35.0%
!!! CTCAAAACACTGGTTTTGTT+TGG - chr8_3:57377456-57377475 Msa1297300:intron 35.0%
ACAGAGTATGACACTTACTT+CGG + chr8_3:57377519-57377538 None:intergenic 35.0%
GCTTCTTCTTTACTTCCAAA+AGG + chr8_3:57377665-57377684 None:intergenic 35.0%
TGACAACGTTTCATGAATCT+AGG + chr8_3:57377882-57377901 None:intergenic 35.0%
! TTTTGCGGTTTTCGGTTTTT+TGG - chr8_3:57378103-57378122 Msa1297300:CDS 35.0%
!!! CGGTTTTTTGGATTAGTTTG+CGG - chr8_3:57378115-57378134 Msa1297300:CDS 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr8_3:57378136-57378155 Msa1297300:CDS 35.0%
! GTATCCTCATATTGCTATTG+GGG - chr8_3:57378291-57378310 Msa1297300:intron 35.0%
! ATGTCATAGAAAGTTTCTGG+TGG + chr8_3:57378361-57378380 None:intergenic 35.0%
CGAACTTACCTTAAAACCAT+TGG + chr8_3:57378389-57378408 None:intergenic 35.0%
ATGGGATGACATAGAATCAA+AGG - chr8_3:57378545-57378564 Msa1297300:intron 35.0%
TGGGATGACATAGAATCAAA+GGG - chr8_3:57378546-57378565 Msa1297300:intron 35.0%
!! TAAAGAGCACTGAAGATCTA+TGG - chr8_3:57378737-57378756 Msa1297300:intron 35.0%
GGAGTCTGCATATAGTTATT+TGG - chr8_3:57378768-57378787 Msa1297300:intron 35.0%
TCAAACTAACCTCCTTGATA+GGG + chr8_3:57378846-57378865 None:intergenic 35.0%
ATCAAACTAACCTCCTTGAT+AGG + chr8_3:57378847-57378866 None:intergenic 35.0%
!!! ACTGTTTTTTATGATGCTGC+TGG - chr8_3:57378940-57378959 Msa1297300:intron 35.0%
!!! CTGTTTTTTATGATGCTGCT+GGG - chr8_3:57378941-57378960 Msa1297300:intron 35.0%
! TGCTGGGAAATTGACTTTAA+TGG - chr8_3:57378957-57378976 Msa1297300:intron 35.0%
! TGGGAAATTGACTTTAATGG+TGG - chr8_3:57378960-57378979 Msa1297300:intron 35.0%
! CTAGCAGTGTTGTTAAATAG+TGG - chr8_3:57378989-57379008 Msa1297300:intron 35.0%
GTAGAAAACAGTAGCTATAG+CGG - chr8_3:57379084-57379103 Msa1297300:intron 35.0%
!! GGTTTACAATACTGGTTTCT+AGG - chr8_3:57379164-57379183 Msa1297300:intron 35.0%
! CTGGTTTCTAGGAATATGTT+TGG - chr8_3:57379175-57379194 Msa1297300:intron 35.0%
!! TTATAAACCCAAGAGTGCTA+GGG - chr8_3:57379631-57379650 Msa1297300:CDS 35.0%
CGTTAAACTTAAAACTCTCG+AGG - chr8_3:57379712-57379731 Msa1297300:intron 35.0%
AAACTTAAAACTCTCGAGGT+AGG - chr8_3:57379716-57379735 Msa1297300:intron 35.0%
AACTTAAAACTCTCGAGGTA+GGG - chr8_3:57379717-57379736 Msa1297300:intron 35.0%
AAGATAGTCAGATTCCTTTC+TGG + chr8_3:57379950-57379969 None:intergenic 35.0%
TACTTTAACAGGTTTGCAGA+AGG - chr8_3:57379987-57380006 Msa1297300:intron 35.0%
GTTTGCAGAAGGATAGATAA+AGG - chr8_3:57379998-57380017 Msa1297300:intron 35.0%
! TGTTTTTCCTTAGTTGTTGC+TGG - chr8_3:57380167-57380186 Msa1297300:intron 35.0%
TACTTATCCAGCAACAACTA+AGG + chr8_3:57380177-57380196 None:intergenic 35.0%
! ATTCCATCTTTTCTTGTCCA+TGG - chr8_3:57380227-57380246 Msa1297300:intron 35.0%
TAATTACTCTTCTTTCCGAG+AGG - chr8_3:57380323-57380342 Msa1297300:intron 35.0%
GGATTACTACAGTATTTGGA+GGG - chr8_3:57380385-57380404 Msa1297300:CDS 35.0%
! TCACCTGTTATTTATGTGAC+TGG - chr8_3:57380473-57380492 Msa1297300:CDS 35.0%
CGTAAAACATTATTGCTTGC+TGG + chr8_3:57380647-57380666 None:intergenic 35.0%
! CAAGCAATAATGTTTTACGG+TGG - chr8_3:57380648-57380667 Msa1297300:intron 35.0%
!! AATTTGACTTGTCTGTTGCA+TGG - chr8_3:57380779-57380798 Msa1297300:CDS 35.0%
CAACAGTAAATGATCCTGAT+TGG - chr8_3:57380863-57380882 Msa1297300:CDS 35.0%
AGTAAATGATCCTGATTGGT+TGG - chr8_3:57380867-57380886 Msa1297300:CDS 35.0%
! TTGTATTAGCTTGATCTCAG+TGG + chr8_3:57380905-57380924 None:intergenic 35.0%
ACTGAGATCAAGCTAATACA+AGG - chr8_3:57380904-57380923 Msa1297300:CDS 35.0%
AGATCAAGCTAATACAAGGA+TGG - chr8_3:57380908-57380927 Msa1297300:CDS 35.0%
! TGCAAGTATTGTTCAGACTA+GGG + chr8_3:57381054-57381073 None:intergenic 35.0%
TAGTCTGAACAATACTTGCA+GGG - chr8_3:57381054-57381073 Msa1297300:CDS 35.0%
TGTGTGTGTATATAACTGAC+TGG - chr8_3:57381105-57381124 Msa1297300:five_prime_UTR 35.0%
! AAGAGTGGAAATGAGTGTTG+TGG + chr8_3:57377156-57377175 None:intergenic 40.0%
!! TCGTAGTGGATATCCAATTG+TGG + chr8_3:57377284-57377303 None:intergenic 40.0%
! GGAAGAATTTGGTTTCGTAG+TGG + chr8_3:57377298-57377317 None:intergenic 40.0%
GAGTCGTTGTTGGAAGAATT+TGG + chr8_3:57377309-57377328 None:intergenic 40.0%
AGGTCTTGAAAAAGCTGAAG+TGG + chr8_3:57377334-57377353 None:intergenic 40.0%
! TGTTGATAAGGTAGCGTTGA+GGG + chr8_3:57377364-57377383 None:intergenic 40.0%
!! CCCAGTTTTCTGTGTTGATA+AGG + chr8_3:57377376-57377395 None:intergenic 40.0%
CACCTTCATTACCACAATAG+AGG + chr8_3:57377421-57377440 None:intergenic 40.0%
!! GTTTGGTTTGCTCAAAACAC+TGG - chr8_3:57377446-57377465 Msa1297300:intron 40.0%
AGAGTATGACACTTACTTCG+GGG + chr8_3:57377517-57377536 None:intergenic 40.0%
CAGAGTATGACACTTACTTC+GGG + chr8_3:57377518-57377537 None:intergenic 40.0%
AGCATTAAGATACCCTAACG+TGG + chr8_3:57377702-57377721 None:intergenic 40.0%
! TAAGACAACAGGAGAAGCAT+TGG + chr8_3:57377783-57377802 None:intergenic 40.0%
! GCTTCTCCTGTTGTCTTATT+TGG - chr8_3:57377785-57377804 Msa1297300:intron 40.0%
!! TCTCCTGTTGTCTTATTTGG+AGG - chr8_3:57377788-57377807 Msa1297300:intron 40.0%
GATCCTCCAAATAAGACAAC+AGG + chr8_3:57377794-57377813 None:intergenic 40.0%
!! GTCTTATTTGGAGGATCCTA+TGG - chr8_3:57377797-57377816 Msa1297300:intron 40.0%
TTATTTGGAGGATCCTATGG+TGG - chr8_3:57377800-57377819 Msa1297300:intron 40.0%
GTTTGATGGAAAGAGGGTAA+TGG + chr8_3:57378063-57378082 None:intergenic 40.0%
!!! ATTCGGTGTTTTGCGGTTTT+CGG - chr8_3:57378095-57378114 Msa1297300:CDS 40.0%
ACCTTATGAGCTTCTAGTAG+GGG + chr8_3:57378171-57378190 None:intergenic 40.0%
CACCTTATGAGCTTCTAGTA+GGG + chr8_3:57378172-57378191 None:intergenic 40.0%
ACACCTTATGAGCTTCTAGT+AGG + chr8_3:57378173-57378192 None:intergenic 40.0%
GTTTATCAGTGTTAGCAGCA+TGG - chr8_3:57378257-57378276 Msa1297300:intron 40.0%
TCAAAGGGTCAAACAAGTGA+TGG - chr8_3:57378561-57378580 Msa1297300:intron 40.0%
GACATAAACACACGCTTCTT+AGG + chr8_3:57378636-57378655 None:intergenic 40.0%
TGAAGATCTATGGAACTGGT+TGG - chr8_3:57378747-57378766 Msa1297300:intron 40.0%
! TCAAGAACTCAGAAGGGTAT+GGG + chr8_3:57378807-57378826 None:intergenic 40.0%
ATCAAGAACTCAGAAGGGTA+TGG + chr8_3:57378808-57378827 None:intergenic 40.0%
! AAGGCATCAAGAACTCAGAA+GGG + chr8_3:57378813-57378832 None:intergenic 40.0%
!! AAAGGCATCAAGAACTCAGA+AGG + chr8_3:57378814-57378833 None:intergenic 40.0%
! GTTATAGCTCTATAGCGTAG+CGG - chr8_3:57379022-57379041 Msa1297300:intron 40.0%
CAATTCGCGGTTTACAATAC+TGG - chr8_3:57379156-57379175 Msa1297300:intron 40.0%
! TGGTCTCTTATCTGACTTGA+AGG - chr8_3:57379195-57379214 Msa1297300:intron 40.0%
CTAGCACTCTTGGGTTTATA+AGG + chr8_3:57379632-57379651 None:intergenic 40.0%
!! CTTATAAACCCAAGAGTGCT+AGG - chr8_3:57379630-57379649 Msa1297300:CDS 40.0%
CGTTGTTCTATTCCTAGGAT+TGG + chr8_3:57379694-57379713 None:intergenic 40.0%
TTCCTATTCGAAGTCCAGAA+AGG - chr8_3:57379933-57379952 Msa1297300:CDS 40.0%
TTCCTTTCTGGACTTCGAAT+AGG + chr8_3:57379938-57379957 None:intergenic 40.0%
ACACCATGGACAAGAAAAGA+TGG + chr8_3:57380233-57380252 None:intergenic 40.0%
! TCTTTTCTTGTCCATGGTGT+AGG - chr8_3:57380233-57380252 Msa1297300:intron 40.0%
GTGGAAACATGCTGAACTTT+CGG + chr8_3:57380293-57380312 None:intergenic 40.0%
AATTCTTGAGGCAATCCTCT+CGG + chr8_3:57380341-57380360 None:intergenic 40.0%
GAGGATTGCCTCAAGAATTT+CGG - chr8_3:57380342-57380361 Msa1297300:intron 40.0%
CGGATTACTACAGTATTTGG+AGG - chr8_3:57380384-57380403 Msa1297300:CDS 40.0%
AGAATATCCATCTCACGTTG+AGG - chr8_3:57380510-57380529 Msa1297300:CDS 40.0%
CAAATTTCCTCAACGTGAGA+TGG + chr8_3:57380520-57380539 None:intergenic 40.0%
CATCTCACGTTGAGGAAATT+TGG - chr8_3:57380518-57380537 Msa1297300:CDS 40.0%
!! TGATTGGTTGGTAGAGCAAA+GGG - chr8_3:57380879-57380898 Msa1297300:CDS 40.0%
AGTATTGTTCAGACTAGGGA+GGG + chr8_3:57381050-57381069 None:intergenic 40.0%
! AAGTATTGTTCAGACTAGGG+AGG + chr8_3:57381051-57381070 None:intergenic 40.0%
! CTGCAAGTATTGTTCAGACT+AGG + chr8_3:57381055-57381074 None:intergenic 40.0%
CTAGTCTGAACAATACTTGC+AGG - chr8_3:57381053-57381072 Msa1297300:CDS 40.0%
! AAGAGTGGAAATGAGTGTTG+TGG + chr8_3:57377156-57377175 None:intergenic 40.0%
!! TCGTAGTGGATATCCAATTG+TGG + chr8_3:57377284-57377303 None:intergenic 40.0%
! GGAAGAATTTGGTTTCGTAG+TGG + chr8_3:57377298-57377317 None:intergenic 40.0%
GAGTCGTTGTTGGAAGAATT+TGG + chr8_3:57377309-57377328 None:intergenic 40.0%
AGGTCTTGAAAAAGCTGAAG+TGG + chr8_3:57377334-57377353 None:intergenic 40.0%
! TGTTGATAAGGTAGCGTTGA+GGG + chr8_3:57377364-57377383 None:intergenic 40.0%
!! CCCAGTTTTCTGTGTTGATA+AGG + chr8_3:57377376-57377395 None:intergenic 40.0%
CACCTTCATTACCACAATAG+AGG + chr8_3:57377421-57377440 None:intergenic 40.0%
!! GTTTGGTTTGCTCAAAACAC+TGG - chr8_3:57377446-57377465 Msa1297300:intron 40.0%
AGAGTATGACACTTACTTCG+GGG + chr8_3:57377517-57377536 None:intergenic 40.0%
CAGAGTATGACACTTACTTC+GGG + chr8_3:57377518-57377537 None:intergenic 40.0%
AGCATTAAGATACCCTAACG+TGG + chr8_3:57377702-57377721 None:intergenic 40.0%
! TAAGACAACAGGAGAAGCAT+TGG + chr8_3:57377783-57377802 None:intergenic 40.0%
! GCTTCTCCTGTTGTCTTATT+TGG - chr8_3:57377785-57377804 Msa1297300:intron 40.0%
!! TCTCCTGTTGTCTTATTTGG+AGG - chr8_3:57377788-57377807 Msa1297300:intron 40.0%
GATCCTCCAAATAAGACAAC+AGG + chr8_3:57377794-57377813 None:intergenic 40.0%
!! GTCTTATTTGGAGGATCCTA+TGG - chr8_3:57377797-57377816 Msa1297300:intron 40.0%
TTATTTGGAGGATCCTATGG+TGG - chr8_3:57377800-57377819 Msa1297300:intron 40.0%
GTTTGATGGAAAGAGGGTAA+TGG + chr8_3:57378063-57378082 None:intergenic 40.0%
!!! ATTCGGTGTTTTGCGGTTTT+CGG - chr8_3:57378095-57378114 Msa1297300:CDS 40.0%
ACCTTATGAGCTTCTAGTAG+GGG + chr8_3:57378171-57378190 None:intergenic 40.0%
CACCTTATGAGCTTCTAGTA+GGG + chr8_3:57378172-57378191 None:intergenic 40.0%
ACACCTTATGAGCTTCTAGT+AGG + chr8_3:57378173-57378192 None:intergenic 40.0%
GTTTATCAGTGTTAGCAGCA+TGG - chr8_3:57378257-57378276 Msa1297300:intron 40.0%
TCAAAGGGTCAAACAAGTGA+TGG - chr8_3:57378561-57378580 Msa1297300:intron 40.0%
GACATAAACACACGCTTCTT+AGG + chr8_3:57378636-57378655 None:intergenic 40.0%
TGAAGATCTATGGAACTGGT+TGG - chr8_3:57378747-57378766 Msa1297300:intron 40.0%
! TCAAGAACTCAGAAGGGTAT+GGG + chr8_3:57378807-57378826 None:intergenic 40.0%
ATCAAGAACTCAGAAGGGTA+TGG + chr8_3:57378808-57378827 None:intergenic 40.0%
! AAGGCATCAAGAACTCAGAA+GGG + chr8_3:57378813-57378832 None:intergenic 40.0%
!! AAAGGCATCAAGAACTCAGA+AGG + chr8_3:57378814-57378833 None:intergenic 40.0%
! GTTATAGCTCTATAGCGTAG+CGG - chr8_3:57379022-57379041 Msa1297300:intron 40.0%
CAATTCGCGGTTTACAATAC+TGG - chr8_3:57379156-57379175 Msa1297300:intron 40.0%
! TGGTCTCTTATCTGACTTGA+AGG - chr8_3:57379195-57379214 Msa1297300:intron 40.0%
CTAGCACTCTTGGGTTTATA+AGG + chr8_3:57379632-57379651 None:intergenic 40.0%
!! CTTATAAACCCAAGAGTGCT+AGG - chr8_3:57379630-57379649 Msa1297300:CDS 40.0%
CGTTGTTCTATTCCTAGGAT+TGG + chr8_3:57379694-57379713 None:intergenic 40.0%
TTCCTATTCGAAGTCCAGAA+AGG - chr8_3:57379933-57379952 Msa1297300:CDS 40.0%
TTCCTTTCTGGACTTCGAAT+AGG + chr8_3:57379938-57379957 None:intergenic 40.0%
ACACCATGGACAAGAAAAGA+TGG + chr8_3:57380233-57380252 None:intergenic 40.0%
! TCTTTTCTTGTCCATGGTGT+AGG - chr8_3:57380233-57380252 Msa1297300:intron 40.0%
GTGGAAACATGCTGAACTTT+CGG + chr8_3:57380293-57380312 None:intergenic 40.0%
AATTCTTGAGGCAATCCTCT+CGG + chr8_3:57380341-57380360 None:intergenic 40.0%
GAGGATTGCCTCAAGAATTT+CGG - chr8_3:57380342-57380361 Msa1297300:intron 40.0%
CGGATTACTACAGTATTTGG+AGG - chr8_3:57380384-57380403 Msa1297300:CDS 40.0%
AGAATATCCATCTCACGTTG+AGG - chr8_3:57380510-57380529 Msa1297300:CDS 40.0%
CAAATTTCCTCAACGTGAGA+TGG + chr8_3:57380520-57380539 None:intergenic 40.0%
CATCTCACGTTGAGGAAATT+TGG - chr8_3:57380518-57380537 Msa1297300:CDS 40.0%
!! TGATTGGTTGGTAGAGCAAA+GGG - chr8_3:57380879-57380898 Msa1297300:CDS 40.0%
AGTATTGTTCAGACTAGGGA+GGG + chr8_3:57381050-57381069 None:intergenic 40.0%
! AAGTATTGTTCAGACTAGGG+AGG + chr8_3:57381051-57381070 None:intergenic 40.0%
! CTGCAAGTATTGTTCAGACT+AGG + chr8_3:57381055-57381074 None:intergenic 40.0%
CTAGTCTGAACAATACTTGC+AGG - chr8_3:57381053-57381072 Msa1297300:CDS 40.0%
! GTGTTGATAAGGTAGCGTTG+AGG + chr8_3:57377365-57377384 None:intergenic 45.0%
AACACAGAAAACTGGGTCGT+TGG - chr8_3:57377380-57377399 Msa1297300:intron 45.0%
AGAAAACTGGGTCGTTGGAT+CGG - chr8_3:57377385-57377404 Msa1297300:intron 45.0%
! GGTCCCATTTTCCTCTATTG+TGG - chr8_3:57377407-57377426 Msa1297300:intron 45.0%
CATACTCTGTAACACTCCTC+CGG - chr8_3:57377529-57377548 Msa1297300:intron 45.0%
! TATGGTGAGTCTGTGCCTTT+TGG - chr8_3:57377647-57377666 Msa1297300:CDS 45.0%
ACCCCTACTAGAAGCTCATA+AGG - chr8_3:57378167-57378186 Msa1297300:CDS 45.0%
AGTGCCCCAATAGCAATATG+AGG + chr8_3:57378298-57378317 None:intergenic 45.0%
GCACTGAAGATCTATGGAAC+TGG - chr8_3:57378743-57378762 Msa1297300:intron 45.0%
CCACTACTTTCAGCAATTCG+CGG - chr8_3:57379143-57379162 Msa1297300:intron 45.0%
TTGTCCTTGACAAAGCTTGC+AGG - chr8_3:57379308-57379327 Msa1297300:intron 45.0%
! TTGTCCTGCAAGCTTTGTCA+AGG + chr8_3:57379315-57379334 None:intergenic 45.0%
CTAGGATTGGATTCGAATGC+AGG + chr8_3:57379681-57379700 None:intergenic 45.0%
CTGCATTCGAATCCAATCCT+AGG - chr8_3:57379679-57379698 Msa1297300:CDS 45.0%
GTTAATCCGTCAAGTCAGGT+AGG + chr8_3:57379761-57379780 None:intergenic 45.0%
TATACTGGAGCGCATATACG+AGG - chr8_3:57380036-57380055 Msa1297300:intron 45.0%
ATACTGGAGCGCATATACGA+GGG - chr8_3:57380037-57380056 Msa1297300:intron 45.0%
GAACTGGATGATGATCCTCA+TGG - chr8_3:57380103-57380122 Msa1297300:intron 45.0%
TCTGAGTGGTTGGAACTTTC+AGG - chr8_3:57380126-57380145 Msa1297300:intron 45.0%
AACTTTCGGCTGCTAGACAT+CGG + chr8_3:57380279-57380298 None:intergenic 45.0%
GCTTCACTCCGAAATTCTTG+AGG + chr8_3:57380353-57380372 None:intergenic 45.0%
AGAATTTCGGAGTGAAGCCA+AGG - chr8_3:57380355-57380374 Msa1297300:intron 45.0%
!! GTAGTAATCCGTTTTGGCCT+TGG + chr8_3:57380375-57380394 None:intergenic 45.0%
CAAATGGCCTATTGGATCCA+TGG - chr8_3:57380558-57380577 Msa1297300:CDS 45.0%
GTTTCTCTGGTGACTGAAGA+AGG - chr8_3:57380735-57380754 Msa1297300:CDS 45.0%
CTTTGCTCTACCAACCAATC+AGG + chr8_3:57380880-57380899 None:intergenic 45.0%
!! CTGATTGGTTGGTAGAGCAA+AGG - chr8_3:57380878-57380897 Msa1297300:CDS 45.0%
! GTGTTGATAAGGTAGCGTTG+AGG + chr8_3:57377365-57377384 None:intergenic 45.0%
AACACAGAAAACTGGGTCGT+TGG - chr8_3:57377380-57377399 Msa1297300:intron 45.0%
AGAAAACTGGGTCGTTGGAT+CGG - chr8_3:57377385-57377404 Msa1297300:intron 45.0%
! GGTCCCATTTTCCTCTATTG+TGG - chr8_3:57377407-57377426 Msa1297300:intron 45.0%
CATACTCTGTAACACTCCTC+CGG - chr8_3:57377529-57377548 Msa1297300:intron 45.0%
! TATGGTGAGTCTGTGCCTTT+TGG - chr8_3:57377647-57377666 Msa1297300:CDS 45.0%
ACCCCTACTAGAAGCTCATA+AGG - chr8_3:57378167-57378186 Msa1297300:CDS 45.0%
AGTGCCCCAATAGCAATATG+AGG + chr8_3:57378298-57378317 None:intergenic 45.0%
GCACTGAAGATCTATGGAAC+TGG - chr8_3:57378743-57378762 Msa1297300:intron 45.0%
CCACTACTTTCAGCAATTCG+CGG - chr8_3:57379143-57379162 Msa1297300:intron 45.0%
TTGTCCTTGACAAAGCTTGC+AGG - chr8_3:57379308-57379327 Msa1297300:intron 45.0%
! TTGTCCTGCAAGCTTTGTCA+AGG + chr8_3:57379315-57379334 None:intergenic 45.0%
CTAGGATTGGATTCGAATGC+AGG + chr8_3:57379681-57379700 None:intergenic 45.0%
CTGCATTCGAATCCAATCCT+AGG - chr8_3:57379679-57379698 Msa1297300:CDS 45.0%
GTTAATCCGTCAAGTCAGGT+AGG + chr8_3:57379761-57379780 None:intergenic 45.0%
TATACTGGAGCGCATATACG+AGG - chr8_3:57380036-57380055 Msa1297300:intron 45.0%
ATACTGGAGCGCATATACGA+GGG - chr8_3:57380037-57380056 Msa1297300:intron 45.0%
GAACTGGATGATGATCCTCA+TGG - chr8_3:57380103-57380122 Msa1297300:intron 45.0%
TCTGAGTGGTTGGAACTTTC+AGG - chr8_3:57380126-57380145 Msa1297300:intron 45.0%
AACTTTCGGCTGCTAGACAT+CGG + chr8_3:57380279-57380298 None:intergenic 45.0%
GCTTCACTCCGAAATTCTTG+AGG + chr8_3:57380353-57380372 None:intergenic 45.0%
AGAATTTCGGAGTGAAGCCA+AGG - chr8_3:57380355-57380374 Msa1297300:intron 45.0%
!! GTAGTAATCCGTTTTGGCCT+TGG + chr8_3:57380375-57380394 None:intergenic 45.0%
CAAATGGCCTATTGGATCCA+TGG - chr8_3:57380558-57380577 Msa1297300:CDS 45.0%
GTTTCTCTGGTGACTGAAGA+AGG - chr8_3:57380735-57380754 Msa1297300:CDS 45.0%
CTTTGCTCTACCAACCAATC+AGG + chr8_3:57380880-57380899 None:intergenic 45.0%
!! CTGATTGGTTGGTAGAGCAA+AGG - chr8_3:57380878-57380897 Msa1297300:CDS 45.0%
TGACTGTGACTGAGAGGGTT+TGG + chr8_3:57377258-57377277 None:intergenic 50.0%
GTCACAGTCACAGCCACAAT+TGG - chr8_3:57377268-57377287 Msa1297300:CDS 50.0%
TGAAGTGGTCGAGTCGTTGT+TGG + chr8_3:57377319-57377338 None:intergenic 50.0%
GAAAACTGGGTCGTTGGATC+GGG - chr8_3:57377386-57377405 Msa1297300:intron 50.0%
TGGGAAATCGCTCCGAAGTT+CGG - chr8_3:57377476-57377495 Msa1297300:CDS 50.0%
TACTTCGGGGAAAACGACCA+TGG + chr8_3:57377504-57377523 None:intergenic 50.0%
GAGCGTCTTACTTCCACCAT+AGG + chr8_3:57377816-57377835 None:intergenic 50.0%
GAGTTCTTGATGCCTTTGCC+TGG - chr8_3:57378817-57378836 Msa1297300:intron 50.0%
! TTGATAGGGTGTCCAGGCAA+AGG + chr8_3:57378832-57378851 None:intergenic 50.0%
TTTGCCTGGACACCCTATCA+AGG - chr8_3:57378831-57378850 Msa1297300:intron 50.0%
GTTAACAGTGCGGCTGAGTT+AGG + chr8_3:57378896-57378915 None:intergenic 50.0%
CCGCGAATTGCTGAAAGTAG+TGG + chr8_3:57379146-57379165 None:intergenic 50.0%
TGTGGACCTTCACGTAGTCA+CGG - chr8_3:57379231-57379250 Msa1297300:intron 50.0%
CATCTCACCCTAGCACTCTT+GGG + chr8_3:57379641-57379660 None:intergenic 50.0%
AGTGCTAGGGTGAGATGGTT+CGG - chr8_3:57379644-57379663 Msa1297300:CDS 50.0%
! TGAGATGGTTCGGGTCTCTT+AGG - chr8_3:57379654-57379673 Msa1297300:CDS 50.0%
AGGTAGGGTTATGCGCTCAT+TGG - chr8_3:57379732-57379751 Msa1297300:intron 50.0%
GGTAGGGTTATGCGCTCATT+GGG - chr8_3:57379733-57379752 Msa1297300:intron 50.0%
GTAGGGTTATGCGCTCATTG+GGG - chr8_3:57379734-57379753 Msa1297300:intron 50.0%
CGAGGTTAATCCGTCAAGTC+AGG + chr8_3:57379765-57379784 None:intergenic 50.0%
ATTAACCTCGTGTGCGCGAA+AGG - chr8_3:57379775-57379794 Msa1297300:intron 50.0%
AGGATAGATAAAGGCCCTGC+TGG - chr8_3:57380007-57380026 Msa1297300:intron 50.0%
GGATAGATAAAGGCCCTGCT+GGG - chr8_3:57380008-57380027 Msa1297300:intron 50.0%
CCAGTATACTAGTCCCAGCA+GGG + chr8_3:57380024-57380043 None:intergenic 50.0%
TCCAGTATACTAGTCCCAGC+AGG + chr8_3:57380025-57380044 None:intergenic 50.0%
TACTGGAGCGCATATACGAG+GGG - chr8_3:57380038-57380057 Msa1297300:intron 50.0%
GATGATCCTCATGGTCTGAG+TGG - chr8_3:57380112-57380131 Msa1297300:intron 50.0%
ATCCTCATGGTCTGAGTGGT+TGG - chr8_3:57380116-57380135 Msa1297300:intron 50.0%
TTCCAACCACTCAGACCATG+AGG + chr8_3:57380121-57380140 None:intergenic 50.0%
TTCAGTGCATGCCTACACCA+TGG + chr8_3:57380247-57380266 None:intergenic 50.0%
GGTGTAGGCATGCACTGAAA+TGG - chr8_3:57380248-57380267 Msa1297300:intron 50.0%
GAGTGAAGCCAAGGCCAAAA+CGG - chr8_3:57380364-57380383 Msa1297300:CDS 50.0%
CACCACTCCATGGATCCAAT+AGG + chr8_3:57380568-57380587 None:intergenic 50.0%
CTATTGGATCCATGGAGTGG+TGG - chr8_3:57380566-57380585 Msa1297300:CDS 50.0%
TTGTTCAGACTAGGGAGGGT+GGG + chr8_3:57381046-57381065 None:intergenic 50.0%
ATTGTTCAGACTAGGGAGGG+TGG + chr8_3:57381047-57381066 None:intergenic 50.0%
TGACTGTGACTGAGAGGGTT+TGG + chr8_3:57377258-57377277 None:intergenic 50.0%
GTCACAGTCACAGCCACAAT+TGG - chr8_3:57377268-57377287 Msa1297300:CDS 50.0%
TGAAGTGGTCGAGTCGTTGT+TGG + chr8_3:57377319-57377338 None:intergenic 50.0%
GAAAACTGGGTCGTTGGATC+GGG - chr8_3:57377386-57377405 Msa1297300:intron 50.0%
TGGGAAATCGCTCCGAAGTT+CGG - chr8_3:57377476-57377495 Msa1297300:CDS 50.0%
TACTTCGGGGAAAACGACCA+TGG + chr8_3:57377504-57377523 None:intergenic 50.0%
GAGCGTCTTACTTCCACCAT+AGG + chr8_3:57377816-57377835 None:intergenic 50.0%
GAGTTCTTGATGCCTTTGCC+TGG - chr8_3:57378817-57378836 Msa1297300:intron 50.0%
! TTGATAGGGTGTCCAGGCAA+AGG + chr8_3:57378832-57378851 None:intergenic 50.0%
TTTGCCTGGACACCCTATCA+AGG - chr8_3:57378831-57378850 Msa1297300:intron 50.0%
GTTAACAGTGCGGCTGAGTT+AGG + chr8_3:57378896-57378915 None:intergenic 50.0%
CCGCGAATTGCTGAAAGTAG+TGG + chr8_3:57379146-57379165 None:intergenic 50.0%
TGTGGACCTTCACGTAGTCA+CGG - chr8_3:57379231-57379250 Msa1297300:intron 50.0%
CATCTCACCCTAGCACTCTT+GGG + chr8_3:57379641-57379660 None:intergenic 50.0%
AGTGCTAGGGTGAGATGGTT+CGG - chr8_3:57379644-57379663 Msa1297300:CDS 50.0%
! TGAGATGGTTCGGGTCTCTT+AGG - chr8_3:57379654-57379673 Msa1297300:CDS 50.0%
AGGTAGGGTTATGCGCTCAT+TGG - chr8_3:57379732-57379751 Msa1297300:intron 50.0%
GGTAGGGTTATGCGCTCATT+GGG - chr8_3:57379733-57379752 Msa1297300:intron 50.0%
GTAGGGTTATGCGCTCATTG+GGG - chr8_3:57379734-57379753 Msa1297300:intron 50.0%
CGAGGTTAATCCGTCAAGTC+AGG + chr8_3:57379765-57379784 None:intergenic 50.0%
ATTAACCTCGTGTGCGCGAA+AGG - chr8_3:57379775-57379794 Msa1297300:intron 50.0%
AGGATAGATAAAGGCCCTGC+TGG - chr8_3:57380007-57380026 Msa1297300:intron 50.0%
GGATAGATAAAGGCCCTGCT+GGG - chr8_3:57380008-57380027 Msa1297300:intron 50.0%
CCAGTATACTAGTCCCAGCA+GGG + chr8_3:57380024-57380043 None:intergenic 50.0%
TCCAGTATACTAGTCCCAGC+AGG + chr8_3:57380025-57380044 None:intergenic 50.0%
TACTGGAGCGCATATACGAG+GGG - chr8_3:57380038-57380057 Msa1297300:intron 50.0%
GATGATCCTCATGGTCTGAG+TGG - chr8_3:57380112-57380131 Msa1297300:intron 50.0%
ATCCTCATGGTCTGAGTGGT+TGG - chr8_3:57380116-57380135 Msa1297300:intron 50.0%
TTCCAACCACTCAGACCATG+AGG + chr8_3:57380121-57380140 None:intergenic 50.0%
TTCAGTGCATGCCTACACCA+TGG + chr8_3:57380247-57380266 None:intergenic 50.0%
GGTGTAGGCATGCACTGAAA+TGG - chr8_3:57380248-57380267 Msa1297300:intron 50.0%
GAGTGAAGCCAAGGCCAAAA+CGG - chr8_3:57380364-57380383 Msa1297300:CDS 50.0%
CACCACTCCATGGATCCAAT+AGG + chr8_3:57380568-57380587 None:intergenic 50.0%
CTATTGGATCCATGGAGTGG+TGG - chr8_3:57380566-57380585 Msa1297300:CDS 50.0%
TTGTTCAGACTAGGGAGGGT+GGG + chr8_3:57381046-57381065 None:intergenic 50.0%
ATTGTTCAGACTAGGGAGGG+TGG + chr8_3:57381047-57381066 None:intergenic 50.0%
GGCTGTGACTGTGACTGAGA+GGG + chr8_3:57377263-57377282 None:intergenic 55.0%
TGGCTGTGACTGTGACTGAG+AGG + chr8_3:57377264-57377283 None:intergenic 55.0%
! GTAGCGTTGAGGGAACGTAG+AGG + chr8_3:57377354-57377373 None:intergenic 55.0%
ACGACCATGGCTCCGAACTT+CGG + chr8_3:57377491-57377510 None:intergenic 55.0%
! ACCTCCTTGATAGGGTGTCC+AGG + chr8_3:57378838-57378857 None:intergenic 55.0%
GTGGACCTTCACGTAGTCAC+GGG - chr8_3:57379232-57379251 Msa1297300:intron 55.0%
CTAGACCCGTGACTACGTGA+AGG + chr8_3:57379240-57379259 None:intergenic 55.0%
CCATCTCACCCTAGCACTCT+TGG + chr8_3:57379642-57379661 None:intergenic 55.0%
!! CCAAGAGTGCTAGGGTGAGA+TGG - chr8_3:57379639-57379658 Msa1297300:CDS 55.0%
GTGCTAGGGTGAGATGGTTC+GGG - chr8_3:57379645-57379664 Msa1297300:CDS 55.0%
! TGGGGTCCTACCTGACTTGA+CGG - chr8_3:57379752-57379771 Msa1297300:intron 55.0%
! CCCTGCTGGGACTAGTATAC+TGG - chr8_3:57380021-57380040 Msa1297300:intron 55.0%
ACTGGAGCGCATATACGAGG+GGG - chr8_3:57380039-57380058 Msa1297300:intron 55.0%
GGCCTATTGGATCCATGGAG+TGG - chr8_3:57380563-57380582 Msa1297300:CDS 55.0%
TATCACCTGCCACCACTCCA+TGG + chr8_3:57380578-57380597 None:intergenic 55.0%
GGCTGTGACTGTGACTGAGA+GGG + chr8_3:57377263-57377282 None:intergenic 55.0%
TGGCTGTGACTGTGACTGAG+AGG + chr8_3:57377264-57377283 None:intergenic 55.0%
! GTAGCGTTGAGGGAACGTAG+AGG + chr8_3:57377354-57377373 None:intergenic 55.0%
ACGACCATGGCTCCGAACTT+CGG + chr8_3:57377491-57377510 None:intergenic 55.0%
! ACCTCCTTGATAGGGTGTCC+AGG + chr8_3:57378838-57378857 None:intergenic 55.0%
GTGGACCTTCACGTAGTCAC+GGG - chr8_3:57379232-57379251 Msa1297300:intron 55.0%
CTAGACCCGTGACTACGTGA+AGG + chr8_3:57379240-57379259 None:intergenic 55.0%
CCATCTCACCCTAGCACTCT+TGG + chr8_3:57379642-57379661 None:intergenic 55.0%
!! CCAAGAGTGCTAGGGTGAGA+TGG - chr8_3:57379639-57379658 Msa1297300:CDS 55.0%
GTGCTAGGGTGAGATGGTTC+GGG - chr8_3:57379645-57379664 Msa1297300:CDS 55.0%
! TGGGGTCCTACCTGACTTGA+CGG - chr8_3:57379752-57379771 Msa1297300:intron 55.0%
! CCCTGCTGGGACTAGTATAC+TGG - chr8_3:57380021-57380040 Msa1297300:intron 55.0%
ACTGGAGCGCATATACGAGG+GGG - chr8_3:57380039-57380058 Msa1297300:intron 55.0%
GGCCTATTGGATCCATGGAG+TGG - chr8_3:57380563-57380582 Msa1297300:CDS 55.0%
TATCACCTGCCACCACTCCA+TGG + chr8_3:57380578-57380597 None:intergenic 55.0%
GCCTGGACACCCTATCAAGG+AGG - chr8_3:57378834-57378853 Msa1297300:intron 60.0%
GGCGTTGCAGCACTGTTGTG+TGG - chr8_3:57379105-57379124 Msa1297300:intron 60.0%
CGTAGTCACGGGTCTAGACG+TGG - chr8_3:57379243-57379262 Msa1297300:intron 60.0%
GGATACCTTTCGCGCACACG+AGG + chr8_3:57379783-57379802 None:intergenic 60.0%
TGGATCCATGGAGTGGTGGC+AGG - chr8_3:57380570-57380589 Msa1297300:CDS 60.0%
GCCTGGACACCCTATCAAGG+AGG - chr8_3:57378834-57378853 Msa1297300:intron 60.0%
GGCGTTGCAGCACTGTTGTG+TGG - chr8_3:57379105-57379124 Msa1297300:intron 60.0%
CGTAGTCACGGGTCTAGACG+TGG - chr8_3:57379243-57379262 Msa1297300:intron 60.0%
GGATACCTTTCGCGCACACG+AGG + chr8_3:57379783-57379802 None:intergenic 60.0%
TGGATCCATGGAGTGGTGGC+AGG - chr8_3:57380570-57380589 Msa1297300:CDS 60.0%
CGCTCCGAAGTTCGGAGCCA+TGG - chr8_3:57377484-57377503 Msa1297300:CDS 65.0%
CGCTCCGAAGTTCGGAGCCA+TGG - chr8_3:57377484-57377503 Msa1297300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57377071 57381159 57377071 ID=Msa1297300;Name=Msa1297300
chr8_3 mRNA 57377071 57381159 57377071 ID=Msa1297300-mRNA-1;Parent=Msa1297300;Name=Msa1297300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=63|0.88|0.9|1|1|1|10|184|520
chr8_3 exon 57377071 57377394 57377071 ID=Msa1297300-mRNA-1:exon:16469;Parent=Msa1297300-mRNA-1
chr8_3 exon 57377474 57377523 57377474 ID=Msa1297300-mRNA-1:exon:16468;Parent=Msa1297300-mRNA-1
chr8_3 exon 57377639 57377718 57377639 ID=Msa1297300-mRNA-1:exon:16467;Parent=Msa1297300-mRNA-1
chr8_3 exon 57377820 57377975 57377820 ID=Msa1297300-mRNA-1:exon:16466;Parent=Msa1297300-mRNA-1
chr8_3 exon 57378083 57378232 57378083 ID=Msa1297300-mRNA-1:exon:16465;Parent=Msa1297300-mRNA-1
chr8_3 exon 57379375 57379498 57379375 ID=Msa1297300-mRNA-1:exon:16464;Parent=Msa1297300-mRNA-1
chr8_3 exon 57379611 57379723 57379611 ID=Msa1297300-mRNA-1:exon:16463;Parent=Msa1297300-mRNA-1
chr8_3 exon 57379831 57379964 57379831 ID=Msa1297300-mRNA-1:exon:16462;Parent=Msa1297300-mRNA-1
chr8_3 exon 57380364 57380592 57380364 ID=Msa1297300-mRNA-1:exon:16461;Parent=Msa1297300-mRNA-1
chr8_3 exon 57380710 57381159 57380710 ID=Msa1297300-mRNA-1:exon:16460;Parent=Msa1297300-mRNA-1
chr8_3 five_prime_UTR 57381097 57381159 57381097 ID=Msa1297300-mRNA-1:five_prime_utr;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57380710 57381096 57380710 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57380364 57380592 57380364 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57379831 57379964 57379831 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57379611 57379723 57379611 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57379375 57379498 57379375 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57378083 57378232 57378083 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57377820 57377975 57377820 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57377639 57377718 57377639 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57377474 57377523 57377474 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 CDS 57377255 57377394 57377255 ID=Msa1297300-mRNA-1:cds;Parent=Msa1297300-mRNA-1
chr8_3 three_prime_UTR 57377071 57377254 57377071 ID=Msa1297300-mRNA-1:three_prime_utr;Parent=Msa1297300-mRNA-1
Gene Sequence

>Msa1297300

ATGGCAACAAAAATCTTCGCCACAACACTCATTTCCACTCTTATCATCATAATCTCTTCTTCACACCAAGCTTTTGCTTTGAATCACACTCCAAAATTCTTTGGTAAATTTTCATCTTCAACCAAACCCTCTCAGTCACAGTCACAGCCACAATTGGATATCCACTACGAAACCAAATTCTTCCAACAACGACTCGACCACTTCAGCTTTTTCAAGACCTCTACGTTCCCTCAACGCTACCTTATCAACACAGAAAACTGGGTCGTTGGATCGGGTCCCATTTTCCTCTATTGTGGTAATGAAGGTGACATTGTTTGGTTTGCTCAAAACACTGGTTTTGTTTGGGAAATCGCTCCGAAGTTCGGAGCCATGGTCGTTTTCCCCGAACATCGATATTATGGTGAGTCTGTGCCTTTTGGAAGTAAAGAAGAAGCTTATAAGAATTCTTCCACGTTAGGGTATCTTAATGCTCAGCAAGCTCTCTTTGATTTCGCTGTTCTTGTTACTGATTTGAAGCGGAATTATTCTGCCAATGCTTCTCCTGTTGTCTTATTTGGAGGATCCTATGGTGGAAGTAAGACGCTCTTTACCTTGTTTCTATTAATTCGAGTAATCGTGTTAGCAGCATGGATGAGACTTAAGTATCCTCATATTGCTATTGGGGCACTAGCATCTTCAGCTCCAATTCTTCAGTTTGAAGACATTGTGCCACCAGAAACTTTCTATGACATTGTTTCCAATGGTTTTAAGCGTGAAAGTTCATCTTGCTTTAACTATATAAAGCAGTCATGGGATGACATAGAATCAAAGGGTCAAACAAGTGATGGCCTTGAACTTCTTACCAAAACATTCAGATTTTGTCAGAAATTAAAGAGCACTGAAGATCTATGGAACTGGTTGGAGTCTGCATATAGTTATTTGGCAATGGTTAACTACCCATACCCTTCTGAGTTCTTGATGCCTTTGCCTGGACACCCTATCAAGGAGGTTTGCAGAAGGATAGATAAAGGCCCTGCTGGGACTAGTATACTGGAGCGCATATACGAGGGGGTGAATGTCTACTACAATTATACTGGAGAAGCTAAATGTTTTGAACTGGATGATGATCCTCATGGTCTGAGTGGTTGGAACTTTCAGGCATGCACTGAAATGGTTATGCCGATGTCTAGCAGCCGAAAGTTCAGCATGTTTCCACCATATGAGTATAATTACTCTTCTTTCCGAGAGGATTGCCTCAAGAATTTCGGAGTGAAGCCAAGGCCAAAACGGATTACTACAGTATTTGGAGGGCATAATATCCATCTCACGTTGAGGAAATTTGGAAGCAACATAATTTTCTCAAATGGCCTATTGGATCCATGGAGTGGTGGCAGTGTTTTGCAAAATATTTCAGAAAGTATTGTTTCTCTGGTGACTGAAGAAGGTGCACACCATATAGATTTACGTGCTTCAACAGTAAATGATCCTGATTGGTTGGTAGAGCAAAGGGCCACTGAGATCAAGCTAATACAAGGATGGATCAGTGACTATTACCAGAACTATAAAGTTGTGTTTGATATGTAA

Protein sequence

>Msa1297300

MATKIFATTLISTLIIIISSSHQAFALNHTPKFFGKFSSSTKPSQSQSQPQLDIHYETKFFQQRLDHFSFFKTSTFPQRYLINTENWVVGSGPIFLYCGNEGDIVWFAQNTGFVWEIAPKFGAMVVFPEHRYYGESVPFGSKEEAYKNSSTLGYLNAQQALFDFAVLVTDLKRNYSANASPVVLFGGSYGGSKTLFTLFLLIRVIVLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYDIVSNGFKRESSSCFNYIKQSWDDIESKGQTSDGLELLTKTFRFCQKLKSTEDLWNWLESAYSYLAMVNYPYPSEFLMPLPGHPIKEVCRRIDKGPAGTSILERIYEGVNVYYNYTGEAKCFELDDDPHGLSGWNFQACTEMVMPMSSSRKFSMFPPYEYNYSSFREDCLKNFGVKPRPKRITTVFGGHNIHLTLRKFGSNIIFSNGLLDPWSGGSVLQNISESIVSLVTEEGAHHIDLRASTVNDPDWLVEQRATEIKLIQGWISDYYQNYKVVFDM*