AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1385010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1385010 MtrunA17_Chr4g0054411 87.638 542 30 3 1 520 1 527 0.0 944
Msa1385010 MtrunA17_Chr7g0266851 50.415 482 216 6 38 513 33 497 2.46e-173 498
Msa1385010 MtrunA17_Chr7g0266831 51.398 465 205 5 56 513 65 515 3.63e-172 496
Msa1385010 MtrunA17_Chr2g0320581 45.788 463 214 8 57 511 56 489 9.66e-134 397
Msa1385010 MtrunA17_Chr2g0315161 40.657 487 239 10 39 516 34 479 4.18e-116 351
Msa1385010 MtrunA17_Chr5g0405091 27.329 483 269 19 57 508 37 468 3.34e-25 108
Msa1385010 MtrunA17_Chr8g0372191 34.783 161 78 6 61 220 44 178 1.41e-14 72.0
Msa1385010 MtrunA17_Chr7g0216291 42.254 71 38 1 116 183 3 73 3.99e-13 65.1
Msa1385010 MtrunA17_Chr8g0372201 25.740 338 184 13 164 483 12 300 1.91e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1385010 AT5G65760.1 69.783 460 123 2 53 510 55 500 0.0 685
Msa1385010 AT2G24280.1 54.262 481 198 6 39 515 29 491 0.0 540
Msa1385010 AT2G24280.2 53.664 423 174 6 39 457 29 433 7.58e-160 461
Msa1385010 AT5G22860.1 38.953 516 278 8 11 515 7 496 3.43e-113 345
Msa1385010 AT5G22860.4 38.655 476 255 8 11 475 7 456 6.59e-99 306
Msa1385010 AT5G22860.2 38.646 458 244 8 11 457 7 438 1.62e-92 289
Msa1385010 AT5G22860.3 38.646 458 244 8 11 457 7 438 1.62e-92 289
Msa1385010 AT5G22860.7 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1385010 AT5G22860.5 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1385010 AT5G22860.6 36.977 430 234 8 11 429 7 410 6.94e-79 256
Msa1385010 AT5G22860.8 36.387 382 206 8 11 381 7 362 7.11e-65 215
Msa1385010 AT3G28680.1 36.486 148 82 3 206 351 23 160 2.66e-24 100
Msa1385010 AT2G18080.1 25.134 561 290 20 6 515 5 486 1.07e-22 101
Msa1385010 AT4G36190.1 38.983 177 80 6 60 229 49 204 2.70e-20 94.4
Msa1385010 AT4G36195.3 36.158 177 85 5 60 229 49 204 7.01e-20 93.2
Msa1385010 AT4G36195.1 36.158 177 85 5 60 229 49 204 7.01e-20 93.2
Msa1385010 AT4G36195.2 36.158 177 85 5 60 229 49 204 7.51e-20 92.8

Find 143 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTCCTGTTGTCTTATT+TGG 0.072346 tig0020703:-41246 Msa1385010:CDS
TCTGAGTGGTTGGAACTTTC+AGG 0.128056 tig0020703:-38905 Msa1385010:intron
GAAAATTTACCAAAGAATTT+TGG 0.166099 tig0020703:+41807 None:intergenic
CATCTCACGTTGAGGAAATT+TGG 0.193930 tig0020703:-38513 Msa1385010:CDS
AAACGGATTACTACAGTATT+TGG 0.208789 tig0020703:-38650 Msa1385010:CDS
ATTACCACAATAGAGGAAAA+TGG 0.227615 tig0020703:+41620 None:intergenic
GGAGTCTGCATATAGTTATT+TGG 0.239792 tig0020703:-40263 Msa1385010:CDS
AATCACACTCCAAAATTCTT+TGG 0.253619 tig0020703:-41816 Msa1385010:CDS
ATATTGTAGCATCGATATTA+TGG 0.254922 tig0020703:-41402 Msa1385010:intron
AAGTATCCTCATATTGCTAT+TGG 0.255745 tig0020703:-40742 Msa1385010:CDS
CTGACAAAATCTGAATGTTT+TGG 0.260595 tig0020703:+40433 None:intergenic
ACAATGTCATAGAAAGTTTC+TGG 0.268432 tig0020703:+40670 None:intergenic
AGTATCCTCATATTGCTATT+GGG 0.301189 tig0020703:-40741 Msa1385010:CDS
TTCTCTTATCAACAGTTCTA+AGG 0.308499 tig0020703:-38016 Msa1385010:three_prime_UTR
GAGTCGTTGTTGGAAGAATT+TGG 0.326045 tig0020703:+41725 None:intergenic
CAAACACAACTTTATAGTTC+TGG 0.336508 tig0020703:+38086 None:intergenic
TATAAGAATTCTTCCACGTT+AGG 0.340696 tig0020703:-41345 Msa1385010:CDS
ACCTTATCAACACAGAAAAC+TGG 0.343571 tig0020703:-41659 Msa1385010:CDS
TTTCTATTAATTCGAGTAAT+CGG 0.346274 tig0020703:-41186 Msa1385010:intron
TTCAGAAAGTATTGTTTCTC+TGG 0.346716 tig0020703:-38309 Msa1385010:CDS
ATCAAACTAACCTCCTTGAT+AGG 0.349096 tig0020703:+40187 None:intergenic
CTAGTCTGAACAATACTTGC+AGG 0.354973 tig0020703:-37978 Msa1385010:three_prime_UTR
TAAAGAGCACTGAAGATCTA+TGG 0.363172 tig0020703:-40294 Msa1385010:CDS
GAGGATTGCCTCAAGAATTT+CGG 0.366801 tig0020703:-38689 Msa1385010:CDS
TTGAAGCACGTAAATCTATA+TGG 0.371153 tig0020703:+38188 None:intergenic
GAGTTCTTGATGCCTTTGCC+TGG 0.374134 tig0020703:-40214 Msa1385010:CDS
TATGGTGAGTCTGTGCCTTT+TGG 0.378206 tig0020703:-41384 Msa1385010:CDS
ATGTCTTCAAACTGAAGAAT+TGG 0.382835 tig0020703:+40700 None:intergenic
AATACTGTAGTAATCCGTTT+TGG 0.384085 tig0020703:+38653 None:intergenic
TGACTGTGACTGAGAGGGTT+TGG 0.407640 tig0020703:+41776 None:intergenic
CCCTGCTGGGACTAGTATAC+TGG 0.409241 tig0020703:-39010 Msa1385010:CDS
TCTCCTGTTGTCTTATTTGG+AGG 0.414863 tig0020703:-41243 Msa1385010:CDS
GTCTTATTTGGAGGATCCTA+TGG 0.423762 tig0020703:-41234 Msa1385010:CDS
TTCCTCTATTGTGGTAATGA+AGG 0.423767 tig0020703:-41615 Msa1385010:CDS
GTGGAAACATGCTGAACTTT+CGG 0.431895 tig0020703:+38741 None:intergenic
CAACAGTAAATGATCCTGAT+TGG 0.432368 tig0020703:-38168 Msa1385010:CDS
TGGGAAATCGCTCCGAAGTT+CGG 0.435860 tig0020703:-41555 Msa1385010:CDS
AGGATAGATAAAGGCCCTGC+TGG 0.440352 tig0020703:-39024 Msa1385010:CDS
GAAGAGTAATTATACTCATA+TGG 0.449549 tig0020703:+38719 None:intergenic
ATAAGAATTCTTCCACGTTA+GGG 0.456394 tig0020703:-41344 Msa1385010:CDS
GAAAACTGGGTCGTTGGATC+GGG 0.458334 tig0020703:-41645 Msa1385010:CDS
GTAATGAAGGTGACATTGTT+TGG 0.463623 tig0020703:-41602 Msa1385010:CDS
CGAACTTACCTTAAAACCAT+TGG 0.465734 tig0020703:+40645 None:intergenic
AATGTCTACTACAATTATAC+TGG 0.466025 tig0020703:-38967 Msa1385010:CDS
TTACCACAATAGAGGAAAAT+GGG 0.471722 tig0020703:+41621 None:intergenic
GATCCTCCAAATAAGACAAC+AGG 0.472975 tig0020703:+41240 None:intergenic
GTCACAGTCACAGCCACAAT+TGG 0.473302 tig0020703:-41763 Msa1385010:CDS
TTCTATGACATTGTTTCCAA+TGG 0.474249 tig0020703:-40661 Msa1385010:CDS
GCTTCTTCTTTACTTCCAAA+AGG 0.475154 tig0020703:+41369 None:intergenic
CAAATTTCCTCAACGTGAGA+TGG 0.478345 tig0020703:+38514 None:intergenic
GTTTCTCTGGTGACTGAAGA+AGG 0.480434 tig0020703:-38296 Msa1385010:intron
CTGCAAGTATTGTTCAGACT+AGG 0.483778 tig0020703:+37979 None:intergenic
ATCAAGAACTCAGAAGGGTA+TGG 0.484345 tig0020703:+40226 None:intergenic
GTTTGCAGAAGGATAGATAA+AGG 0.486472 tig0020703:-39033 Msa1385010:CDS
CTTTGCTCTACCAACCAATC+AGG 0.487546 tig0020703:+38154 None:intergenic
TGCATATAGTTATTTGGCAA+TGG 0.488874 tig0020703:-40257 Msa1385010:CDS
TGTTGATAAGGTAGCGTTGA+GGG 0.492096 tig0020703:+41670 None:intergenic
AGAAAACTGGGTCGTTGGAT+CGG 0.495530 tig0020703:-41646 Msa1385010:CDS
CGCTCCGAAGTTCGGAGCCA+TGG 0.495989 tig0020703:-41547 Msa1385010:CDS
ACCTCCTTGATAGGGTGTCC+AGG 0.498397 tig0020703:+40196 None:intergenic
TGAAGTGGTCGAGTCGTTGT+TGG 0.499023 tig0020703:+41715 None:intergenic
CAAATGGCCTATTGGATCCA+TGG 0.499366 tig0020703:-38473 Msa1385010:CDS
TGATTGGTTGGTAGAGCAAA+GGG 0.504617 tig0020703:-38152 Msa1385010:CDS
AGAGATTATGATGATAAGAG+TGG 0.506200 tig0020703:+41863 None:intergenic
ATCCTCATGGTCTGAGTGGT+TGG 0.507139 tig0020703:-38915 Msa1385010:CDS
CACCACTCCATGGATCCAAT+AGG 0.510198 tig0020703:+38466 None:intergenic
GCACTGAAGATCTATGGAAC+TGG 0.510335 tig0020703:-40288 Msa1385010:CDS
CACCTTCATTACCACAATAG+AGG 0.514961 tig0020703:+41613 None:intergenic
ATGGGATGACATAGAATCAA+AGG 0.520719 tig0020703:-40486 Msa1385010:CDS
GTATCCTCATATTGCTATTG+GGG 0.523000 tig0020703:-40740 Msa1385010:CDS
TCCAGTATACTAGTCCCAGC+AGG 0.524915 tig0020703:+39009 None:intergenic
TTAACTATATAAAGCAGTCA+TGG 0.526435 tig0020703:-40505 Msa1385010:CDS
GTTTGGTTTGCTCAAAACAC+TGG 0.528202 tig0020703:-41585 Msa1385010:CDS
GGTGTAGGCATGCACTGAAA+TGG 0.530351 tig0020703:-38783 Msa1385010:intron
AACACAGAAAACTGGGTCGT+TGG 0.530504 tig0020703:-41651 Msa1385010:CDS
GAGTGAAGCCAAGGCCAAAA+CGG 0.535816 tig0020703:-38667 Msa1385010:CDS
TGGATCCATGGAGTGGTGGC+AGG 0.541273 tig0020703:-38461 Msa1385010:intron
ACGACCATGGCTCCGAACTT+CGG 0.542721 tig0020703:+41543 None:intergenic
TTTGCCTGGACACCCTATCA+AGG 0.543228 tig0020703:-40200 Msa1385010:CDS
TAAGACAACAGGAGAAGCAT+TGG 0.545142 tig0020703:+41251 None:intergenic
GTTTATCAGTGTTAGCAGCA+TGG 0.547154 tig0020703:-40774 Msa1385010:intron
GGCTGTGACTGTGACTGAGA+GGG 0.554038 tig0020703:+41771 None:intergenic
AAAGGCATCAAGAACTCAGA+AGG 0.554763 tig0020703:+40220 None:intergenic
TTCTTGTTACTGATTTGAAG+CGG 0.554809 tig0020703:-41284 Msa1385010:CDS
TCAAACTAACCTCCTTGATA+GGG 0.555408 tig0020703:+40188 None:intergenic
AGTGCCCCAATAGCAATATG+AGG 0.558308 tig0020703:+40736 None:intergenic
AGTAAATGATCCTGATTGGT+TGG 0.558556 tig0020703:-38164 Msa1385010:CDS
CGGATTACTACAGTATTTGG+AGG 0.559733 tig0020703:-38647 Msa1385010:CDS
TACTTTAACAGGTTTGCAGA+AGG 0.560532 tig0020703:-39044 Msa1385010:intron
TGCAAGTATTGTTCAGACTA+GGG 0.564302 tig0020703:+37980 None:intergenic
CCTTATCAACACAGAAAACT+GGG 0.566661 tig0020703:-41658 Msa1385010:CDS
GCTTCACTCCGAAATTCTTG+AGG 0.566759 tig0020703:+38681 None:intergenic
AATTCTTGAGGCAATCCTCT+CGG 0.568694 tig0020703:+38693 None:intergenic
TGTGATTCAAAGCAAAAGCT+TGG 0.568802 tig0020703:+41832 None:intergenic
TAACTATATAAAGCAGTCAT+GGG 0.569573 tig0020703:-40504 Msa1385010:CDS
TTGTATTAGCTTGATCTCAG+TGG 0.571836 tig0020703:+38129 None:intergenic
TATCACCTGCCACCACTCCA+TGG 0.573825 tig0020703:+38456 None:intergenic
TCAAAGGGTCAAACAAGTGA+TGG 0.575197 tig0020703:-40470 Msa1385010:CDS
TCAAGAACTCAGAAGGGTAT+GGG 0.576645 tig0020703:+40227 None:intergenic
TTGATAGGGTGTCCAGGCAA+AGG 0.578962 tig0020703:+40202 None:intergenic
GAGCGTCTTACTTCCACCAT+AGG 0.579660 tig0020703:+41218 None:intergenic
CTGATTGGTTGGTAGAGCAA+AGG 0.582278 tig0020703:-38153 Msa1385010:CDS
GGATAGATAAAGGCCCTGCT+GGG 0.583277 tig0020703:-39023 Msa1385010:CDS
TGGGATGACATAGAATCAAA+GGG 0.588685 tig0020703:-40485 Msa1385010:CDS
TTGTTCAGACTAGGGAGGGT+GGG 0.592132 tig0020703:+37988 None:intergenic
TGGCTGTGACTGTGACTGAG+AGG 0.592599 tig0020703:+41770 None:intergenic
GGAAGAATTTGGTTTCGTAG+TGG 0.598470 tig0020703:+41736 None:intergenic
GAACTGGATGATGATCCTCA+TGG 0.603016 tig0020703:-38928 Msa1385010:CDS
TGAAGATCTATGGAACTGGT+TGG 0.604641 tig0020703:-40284 Msa1385010:CDS
TAGTCTGAACAATACTTGCA+GGG 0.605126 tig0020703:-37977 Msa1385010:three_prime_UTR
ATTGTTCAGACTAGGGAGGG+TGG 0.606445 tig0020703:+37987 None:intergenic
AGATCAAGCTAATACAAGGA+TGG 0.611530 tig0020703:-38123 Msa1385010:CDS
TTATTTGGAGGATCCTATGG+TGG 0.613532 tig0020703:-41231 Msa1385010:CDS
TCGTAGTGGATATCCAATTG+TGG 0.615599 tig0020703:+41750 None:intergenic
TGTGTGTGTATATAACTGAC+TGG 0.616188 tig0020703:-37926 Msa1385010:three_prime_UTR
CTATTGGATCCATGGAGTGG+TGG 0.619177 tig0020703:-38465 Msa1385010:CDS
ATACTGGAGCGCATATACGA+GGG 0.620335 tig0020703:-38994 Msa1385010:CDS
TAAATATCTCAAACGCAACA+CGG 0.620681 tig0020703:-41943 Msa1385010:five_prime_UTR
AGAATTTCGGAGTGAAGCCA+AGG 0.621803 tig0020703:-38676 Msa1385010:CDS
GAGTAATTATACTCATATGG+TGG 0.629068 tig0020703:+38722 None:intergenic
AGTATTGTTCAGACTAGGGA+GGG 0.630037 tig0020703:+37984 None:intergenic
ACTGAGATCAAGCTAATACA+AGG 0.630890 tig0020703:-38127 Msa1385010:CDS
AACTTTCGGCTGCTAGACAT+CGG 0.635841 tig0020703:+38755 None:intergenic
TAATTACTCTTCTTTCCGAG+AGG 0.643189 tig0020703:-38708 Msa1385010:CDS
TATACTGGAGCGCATATACG+AGG 0.643510 tig0020703:-38995 Msa1385010:CDS
GGATTACTACAGTATTTGGA+GGG 0.644022 tig0020703:-38646 Msa1385010:CDS
GATGATCCTCATGGTCTGAG+TGG 0.655248 tig0020703:-38919 Msa1385010:CDS
TACTCGAATTAATAGAAACA+AGG 0.655715 tig0020703:+41191 None:intergenic
AAGTATTGTTCAGACTAGGG+AGG 0.662354 tig0020703:+37983 None:intergenic
TACTTCGGGGAAAACGACCA+TGG 0.663338 tig0020703:+41530 None:intergenic
TACTGGAGCGCATATACGAG+GGG 0.663470 tig0020703:-38993 Msa1385010:CDS
AGAATATCCATCTCACGTTG+AGG 0.666478 tig0020703:-38521 Msa1385010:CDS
GTGTTGATAAGGTAGCGTTG+AGG 0.684679 tig0020703:+41669 None:intergenic
AAGGCATCAAGAACTCAGAA+GGG 0.686106 tig0020703:+40221 None:intergenic
TTCCAACCACTCAGACCATG+AGG 0.689493 tig0020703:+38913 None:intergenic
GCCTGGACACCCTATCAAGG+AGG 0.690287 tig0020703:-40197 Msa1385010:intron
CCAGTATACTAGTCCCAGCA+GGG 0.691394 tig0020703:+39010 None:intergenic
AAGAGTGGAAATGAGTGTTG+TGG 0.695653 tig0020703:+41878 None:intergenic
ATGTCATAGAAAGTTTCTGG+TGG 0.697736 tig0020703:+40673 None:intergenic
GGCCTATTGGATCCATGGAG+TGG 0.702021 tig0020703:-38468 Msa1385010:CDS
AGCATTAAGATACCCTAACG+TGG 0.721288 tig0020703:+41332 None:intergenic
ACTGGAGCGCATATACGAGG+GGG 0.737840 tig0020703:-38992 Msa1385010:CDS
GTAGCGTTGAGGGAACGTAG+AGG 0.740430 tig0020703:+41680 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATCTAATTATGTTAAC+TGG - tig0020703:38412-38431 Msa1385010:intron 15.0%
!!! CACTTTTACTAATTTAATAA+AGG + tig0020703:38831-38850 None:intergenic 15.0%
!!! ATATTTTTAATTGAGTTTGA+TGG + tig0020703:38900-38919 None:intergenic 15.0%
!! CAAACTCAATTAAAAATATT+CGG - tig0020703:38901-38920 Msa1385010:intron 15.0%
!! TATAAAAAAATATCATCAGT+AGG + tig0020703:40253-40272 None:intergenic 15.0%
!! AAATACTAAATCAATTGATA+AGG - tig0020703:40298-40317 Msa1385010:CDS 15.0%
!!! TGCTTAATTACTTTTTTTTA+GGG + tig0020703:40635-40654 None:intergenic 15.0%
!!! TTGCTTAATTACTTTTTTTT+AGG + tig0020703:40636-40655 None:intergenic 15.0%
!!! ATTTTTAATTTCCGTTAATT+AGG + tig0020703:40661-40680 None:intergenic 15.0%
!! TCTTATATATATACTTTAAC+AGG - tig0020703:40799-40818 Msa1385010:intron 15.0%
!! AAACAATATAACAAAGATAT+TGG + tig0020703:41438-41457 None:intergenic 15.0%
!! TATTATCTAATTATGTTAAC+TGG - tig0020703:38412-38431 Msa1385010:intron 15.0%
!!! CACTTTTACTAATTTAATAA+AGG + tig0020703:38831-38850 None:intergenic 15.0%
!!! ATATTTTTAATTGAGTTTGA+TGG + tig0020703:38900-38919 None:intergenic 15.0%
!! CAAACTCAATTAAAAATATT+CGG - tig0020703:38901-38920 Msa1385010:intron 15.0%
!! TATAAAAAAATATCATCAGT+AGG + tig0020703:40253-40272 None:intergenic 15.0%
!! AAATACTAAATCAATTGATA+AGG - tig0020703:40298-40317 Msa1385010:CDS 15.0%
!!! TGCTTAATTACTTTTTTTTA+GGG + tig0020703:40635-40654 None:intergenic 15.0%
!!! TTGCTTAATTACTTTTTTTT+AGG + tig0020703:40636-40655 None:intergenic 15.0%
!!! ATTTTTAATTTCCGTTAATT+AGG + tig0020703:40661-40680 None:intergenic 15.0%
!! TCTTATATATATACTTTAAC+AGG - tig0020703:40799-40818 Msa1385010:intron 15.0%
!! AAACAATATAACAAAGATAT+TGG + tig0020703:41438-41457 None:intergenic 15.0%
!!! GAAAATTTACCAAAGAATTT+TGG + tig0020703:38050-38069 None:intergenic 20.0%
!!! CTTTCTCTTATATTTAAAAC+CGG + tig0020703:38374-38393 None:intergenic 20.0%
!! TTTCTATTAATTCGAGTAAT+CGG - tig0020703:38668-38687 Msa1385010:CDS 20.0%
!!! TAGTCTTTTTAGTTTCAAAT+TGG - tig0020703:38804-38823 Msa1385010:intron 20.0%
!! ATTAAGCAAATCCTAATTAA+CGG - tig0020703:40647-40666 Msa1385010:intron 20.0%
!!! AGAAAACAAATTTGGAATAA+TGG + tig0020703:40700-40719 None:intergenic 20.0%
!! AAAGAAGAAGAAAACAAATT+TGG + tig0020703:40708-40727 None:intergenic 20.0%
!! AATCAAAGATTAATGCTATT+TGG + tig0020703:41029-41048 None:intergenic 20.0%
!! TCAAATTATGAATAATCGAA+TGG + tig0020703:41589-41608 None:intergenic 20.0%
!!! TTTTTTCATCTTATATTCTC+AGG - tig0020703:41637-41656 Msa1385010:CDS 20.0%
!!! GAAAATTTACCAAAGAATTT+TGG + tig0020703:38050-38069 None:intergenic 20.0%
!!! CTTTCTCTTATATTTAAAAC+CGG + tig0020703:38374-38393 None:intergenic 20.0%
!! TTTCTATTAATTCGAGTAAT+CGG - tig0020703:38668-38687 Msa1385010:CDS 20.0%
!!! TAGTCTTTTTAGTTTCAAAT+TGG - tig0020703:38804-38823 Msa1385010:intron 20.0%
!! ATTAAGCAAATCCTAATTAA+CGG - tig0020703:40647-40666 Msa1385010:intron 20.0%
!!! AGAAAACAAATTTGGAATAA+TGG + tig0020703:40700-40719 None:intergenic 20.0%
!! AAAGAAGAAGAAAACAAATT+TGG + tig0020703:40708-40727 None:intergenic 20.0%
!! AATCAAAGATTAATGCTATT+TGG + tig0020703:41029-41048 None:intergenic 20.0%
!! TCAAATTATGAATAATCGAA+TGG + tig0020703:41589-41608 None:intergenic 20.0%
!!! TTTTTTCATCTTATATTCTC+AGG - tig0020703:41637-41656 Msa1385010:CDS 20.0%
!!! ATATTGTAGCATCGATATTA+TGG - tig0020703:38452-38471 Msa1385010:intron 25.0%
! TACTCGAATTAATAGAAACA+AGG + tig0020703:38666-38685 None:intergenic 25.0%
!! TTTTCGTTTAACGTTTGTAT+CGG - tig0020703:38770-38789 Msa1385010:CDS 25.0%
!!! TAAAAATATTCGGTGTTTTG+CGG - tig0020703:38911-38930 Msa1385010:CDS 25.0%
!!! ATTAGTTTGCGGTTTTATTT+TGG - tig0020703:38949-38968 Msa1385010:CDS 25.0%
!!! ATTGTTGATGTTAGTTTTTC+TGG - tig0020703:39240-39259 Msa1385010:intron 25.0%
! TTAACTATATAAAGCAGTCA+TGG - tig0020703:39349-39368 Msa1385010:intron 25.0%
! TAACTATATAAAGCAGTCAT+GGG - tig0020703:39350-39369 Msa1385010:intron 25.0%
! GAAGGAATTAAATTATGTTG+TGG - tig0020703:40036-40055 Msa1385010:intron 25.0%
!!! TTGTTTCTTGCTTTTACAAA+AGG + tig0020703:40109-40128 None:intergenic 25.0%
!!! ACATGCAAGAAATCATTTTT+AGG + tig0020703:40170-40189 None:intergenic 25.0%
! CTAAAATGGTAGATTAGTAT+TGG + tig0020703:40198-40217 None:intergenic 25.0%
!! ATACTAATCTACCATTTTAG+AGG - tig0020703:40198-40217 Msa1385010:CDS 25.0%
!!! TACTTTTTTTTAGGGTAAAC+TGG + tig0020703:40627-40646 None:intergenic 25.0%
!! ACAAATTTGGAATAATGGTT+AGG + tig0020703:40695-40714 None:intergenic 25.0%
! AATGTCTACTACAATTATAC+TGG - tig0020703:40887-40906 Msa1385010:intron 25.0%
! GAAGAGTAATTATACTCATA+TGG + tig0020703:41138-41157 None:intergenic 25.0%
! TAATATCACAACAATGGAAA+TGG + tig0020703:41268-41287 None:intergenic 25.0%
!! AGCAACATAATTTTCTCAAA+TGG - tig0020703:41365-41384 Msa1385010:CDS 25.0%
!!! ATATTGTAGCATCGATATTA+TGG - tig0020703:38452-38471 Msa1385010:intron 25.0%
! TACTCGAATTAATAGAAACA+AGG + tig0020703:38666-38685 None:intergenic 25.0%
!! TTTTCGTTTAACGTTTGTAT+CGG - tig0020703:38770-38789 Msa1385010:CDS 25.0%
!!! TAAAAATATTCGGTGTTTTG+CGG - tig0020703:38911-38930 Msa1385010:CDS 25.0%
!!! ATTAGTTTGCGGTTTTATTT+TGG - tig0020703:38949-38968 Msa1385010:CDS 25.0%
!!! ATTGTTGATGTTAGTTTTTC+TGG - tig0020703:39240-39259 Msa1385010:intron 25.0%
! TTAACTATATAAAGCAGTCA+TGG - tig0020703:39349-39368 Msa1385010:intron 25.0%
! TAACTATATAAAGCAGTCAT+GGG - tig0020703:39350-39369 Msa1385010:intron 25.0%
! GAAGGAATTAAATTATGTTG+TGG - tig0020703:40036-40055 Msa1385010:intron 25.0%
!!! TTGTTTCTTGCTTTTACAAA+AGG + tig0020703:40109-40128 None:intergenic 25.0%
!!! ACATGCAAGAAATCATTTTT+AGG + tig0020703:40170-40189 None:intergenic 25.0%
! CTAAAATGGTAGATTAGTAT+TGG + tig0020703:40198-40217 None:intergenic 25.0%
!! ATACTAATCTACCATTTTAG+AGG - tig0020703:40198-40217 Msa1385010:CDS 25.0%
!!! TACTTTTTTTTAGGGTAAAC+TGG + tig0020703:40627-40646 None:intergenic 25.0%
!! ACAAATTTGGAATAATGGTT+AGG + tig0020703:40695-40714 None:intergenic 25.0%
! AATGTCTACTACAATTATAC+TGG - tig0020703:40887-40906 Msa1385010:intron 25.0%
! GAAGAGTAATTATACTCATA+TGG + tig0020703:41138-41157 None:intergenic 25.0%
! TAATATCACAACAATGGAAA+TGG + tig0020703:41268-41287 None:intergenic 25.0%
!! AGCAACATAATTTTCTCAAA+TGG - tig0020703:41365-41384 Msa1385010:CDS 25.0%
TAAATATCTCAAACGCAACA+CGG - tig0020703:37911-37930 Msa1385010:three_prime_UTR 30.0%
AGTTCAGTACTTGTCAAAAA+TGG - tig0020703:37938-37957 Msa1385010:three_prime_UTR 30.0%
AGAGATTATGATGATAAGAG+TGG + tig0020703:37994-38013 None:intergenic 30.0%
AATCACACTCCAAAATTCTT+TGG - tig0020703:38038-38057 Msa1385010:three_prime_UTR 30.0%
TTACCACAATAGAGGAAAAT+GGG + tig0020703:38236-38255 None:intergenic 30.0%
ATTACCACAATAGAGGAAAA+TGG + tig0020703:38237-38256 None:intergenic 30.0%
!!! TCAAAACACTGGTTTTGTTT+GGG - tig0020703:38280-38299 Msa1385010:intron 30.0%
! TCTCTTATATTTAAAACCGG+AGG + tig0020703:38371-38390 None:intergenic 30.0%
TATAAGAATTCTTCCACGTT+AGG - tig0020703:38509-38528 Msa1385010:CDS 30.0%
ATAAGAATTCTTCCACGTTA+GGG - tig0020703:38510-38529 Msa1385010:CDS 30.0%
!! TTCTTGTTACTGATTTGAAG+CGG - tig0020703:38570-38589 Msa1385010:intron 30.0%
AATTGAGTTTGATGGAAAGA+GGG + tig0020703:38892-38911 None:intergenic 30.0%
TAATTGAGTTTGATGGAAAG+AGG + tig0020703:38893-38912 None:intergenic 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - tig0020703:38954-38973 Msa1385010:CDS 30.0%
!!! TTATGCTGATGTTGTTTTGT+TGG - tig0020703:39058-39077 Msa1385010:intron 30.0%
AAGTATCCTCATATTGCTAT+TGG - tig0020703:39112-39131 Msa1385010:intron 30.0%
! AGTATCCTCATATTGCTATT+GGG - tig0020703:39113-39132 Msa1385010:intron 30.0%
ATGTCTTCAAACTGAAGAAT+TGG + tig0020703:39157-39176 None:intergenic 30.0%
ACAATGTCATAGAAAGTTTC+TGG + tig0020703:39187-39206 None:intergenic 30.0%
TTCTATGACATTGTTTCCAA+TGG - tig0020703:39193-39212 Msa1385010:intron 30.0%
!! CATTGTTTCCAATGGTTTTA+AGG - tig0020703:39201-39220 Msa1385010:intron 30.0%
!!! ATGTTTTGGTAAGAAGTTCA+AGG + tig0020703:39410-39429 None:intergenic 30.0%
! CTGACAAAATCTGAATGTTT+TGG + tig0020703:39424-39443 None:intergenic 30.0%
! TTAGTTTAACTGCTTGTTGA+AGG - tig0020703:39533-39552 Msa1385010:intron 30.0%
TGCATATAGTTATTTGGCAA+TGG - tig0020703:39597-39616 Msa1385010:intron 30.0%
TGATAGAATAGTTAACAGTG+CGG + tig0020703:39729-39748 None:intergenic 30.0%
AGCATCATAAAAAACAGTCA+AGG + tig0020703:39761-39780 None:intergenic 30.0%
! TTAATCTGTAGCCTCTAAAA+TGG + tig0020703:40212-40231 None:intergenic 30.0%
!! ATATCATCAGTAGGTTGATT+AGG + tig0020703:40244-40263 None:intergenic 30.0%
TTTAACGTTGTTCTATTCCT+AGG + tig0020703:40522-40541 None:intergenic 30.0%
!! AGAAGCTAAATGTTTTGAAC+TGG - tig0020703:40910-40929 Msa1385010:intron 30.0%
GAGTAATTATACTCATATGG+TGG + tig0020703:41135-41154 None:intergenic 30.0%
! AATACTGTAGTAATCCGTTT+TGG + tig0020703:41204-41223 None:intergenic 30.0%
!! AAACGGATTACTACAGTATT+TGG - tig0020703:41204-41223 Msa1385010:CDS 30.0%
AGAGCATAATATCACAACAA+TGG + tig0020703:41274-41293 None:intergenic 30.0%
TTTCCAGTCACATAAATAAC+AGG + tig0020703:41302-41321 None:intergenic 30.0%
! AATTTTCTCAAATGGCCTAT+TGG - tig0020703:41373-41392 Msa1385010:CDS 30.0%
! CAGCAAGCAATAATGTTTTA+CGG - tig0020703:41468-41487 Msa1385010:intron 30.0%
!! TTCAGAAAGTATTGTTTCTC+TGG - tig0020703:41545-41564 Msa1385010:CDS 30.0%
TTGAAGCACGTAAATCTATA+TGG + tig0020703:41669-41688 None:intergenic 30.0%
CAAACACAACTTTATAGTTC+TGG + tig0020703:41771-41790 None:intergenic 30.0%
TTCTCTTATCAACAGTTCTA+AGG - tig0020703:41838-41857 Msa1385010:CDS 30.0%
TAAATATCTCAAACGCAACA+CGG - tig0020703:37911-37930 Msa1385010:three_prime_UTR 30.0%
AGTTCAGTACTTGTCAAAAA+TGG - tig0020703:37938-37957 Msa1385010:three_prime_UTR 30.0%
AGAGATTATGATGATAAGAG+TGG + tig0020703:37994-38013 None:intergenic 30.0%
AATCACACTCCAAAATTCTT+TGG - tig0020703:38038-38057 Msa1385010:three_prime_UTR 30.0%
TTACCACAATAGAGGAAAAT+GGG + tig0020703:38236-38255 None:intergenic 30.0%
ATTACCACAATAGAGGAAAA+TGG + tig0020703:38237-38256 None:intergenic 30.0%
!!! TCAAAACACTGGTTTTGTTT+GGG - tig0020703:38280-38299 Msa1385010:intron 30.0%
! TCTCTTATATTTAAAACCGG+AGG + tig0020703:38371-38390 None:intergenic 30.0%
TATAAGAATTCTTCCACGTT+AGG - tig0020703:38509-38528 Msa1385010:CDS 30.0%
ATAAGAATTCTTCCACGTTA+GGG - tig0020703:38510-38529 Msa1385010:CDS 30.0%
!! TTCTTGTTACTGATTTGAAG+CGG - tig0020703:38570-38589 Msa1385010:intron 30.0%
AATTGAGTTTGATGGAAAGA+GGG + tig0020703:38892-38911 None:intergenic 30.0%
TAATTGAGTTTGATGGAAAG+AGG + tig0020703:38893-38912 None:intergenic 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - tig0020703:38954-38973 Msa1385010:CDS 30.0%
!!! TTATGCTGATGTTGTTTTGT+TGG - tig0020703:39058-39077 Msa1385010:intron 30.0%
AAGTATCCTCATATTGCTAT+TGG - tig0020703:39112-39131 Msa1385010:intron 30.0%
! AGTATCCTCATATTGCTATT+GGG - tig0020703:39113-39132 Msa1385010:intron 30.0%
ATGTCTTCAAACTGAAGAAT+TGG + tig0020703:39157-39176 None:intergenic 30.0%
ACAATGTCATAGAAAGTTTC+TGG + tig0020703:39187-39206 None:intergenic 30.0%
TTCTATGACATTGTTTCCAA+TGG - tig0020703:39193-39212 Msa1385010:intron 30.0%
!! CATTGTTTCCAATGGTTTTA+AGG - tig0020703:39201-39220 Msa1385010:intron 30.0%
!!! ATGTTTTGGTAAGAAGTTCA+AGG + tig0020703:39410-39429 None:intergenic 30.0%
! CTGACAAAATCTGAATGTTT+TGG + tig0020703:39424-39443 None:intergenic 30.0%
! TTAGTTTAACTGCTTGTTGA+AGG - tig0020703:39533-39552 Msa1385010:intron 30.0%
TGCATATAGTTATTTGGCAA+TGG - tig0020703:39597-39616 Msa1385010:intron 30.0%
TGATAGAATAGTTAACAGTG+CGG + tig0020703:39729-39748 None:intergenic 30.0%
AGCATCATAAAAAACAGTCA+AGG + tig0020703:39761-39780 None:intergenic 30.0%
! TTAATCTGTAGCCTCTAAAA+TGG + tig0020703:40212-40231 None:intergenic 30.0%
!! ATATCATCAGTAGGTTGATT+AGG + tig0020703:40244-40263 None:intergenic 30.0%
TTTAACGTTGTTCTATTCCT+AGG + tig0020703:40522-40541 None:intergenic 30.0%
!! AGAAGCTAAATGTTTTGAAC+TGG - tig0020703:40910-40929 Msa1385010:intron 30.0%
GAGTAATTATACTCATATGG+TGG + tig0020703:41135-41154 None:intergenic 30.0%
! AATACTGTAGTAATCCGTTT+TGG + tig0020703:41204-41223 None:intergenic 30.0%
!! AAACGGATTACTACAGTATT+TGG - tig0020703:41204-41223 Msa1385010:CDS 30.0%
AGAGCATAATATCACAACAA+TGG + tig0020703:41274-41293 None:intergenic 30.0%
TTTCCAGTCACATAAATAAC+AGG + tig0020703:41302-41321 None:intergenic 30.0%
! AATTTTCTCAAATGGCCTAT+TGG - tig0020703:41373-41392 Msa1385010:CDS 30.0%
! CAGCAAGCAATAATGTTTTA+CGG - tig0020703:41468-41487 Msa1385010:intron 30.0%
!! TTCAGAAAGTATTGTTTCTC+TGG - tig0020703:41545-41564 Msa1385010:CDS 30.0%
TTGAAGCACGTAAATCTATA+TGG + tig0020703:41669-41688 None:intergenic 30.0%
CAAACACAACTTTATAGTTC+TGG + tig0020703:41771-41790 None:intergenic 30.0%
TTCTCTTATCAACAGTTCTA+AGG - tig0020703:41838-41857 Msa1385010:CDS 30.0%
TGTGATTCAAAGCAAAAGCT+TGG + tig0020703:38025-38044 None:intergenic 35.0%
ACCTTATCAACACAGAAAAC+TGG - tig0020703:38195-38214 Msa1385010:CDS 35.0%
CCTTATCAACACAGAAAACT+GGG - tig0020703:38196-38215 Msa1385010:CDS 35.0%
! TTCCTCTATTGTGGTAATGA+AGG - tig0020703:38239-38258 Msa1385010:intron 35.0%
GTAATGAAGGTGACATTGTT+TGG - tig0020703:38252-38271 Msa1385010:intron 35.0%
!!! CTCAAAACACTGGTTTTGTT+TGG - tig0020703:38279-38298 Msa1385010:intron 35.0%
ACAGAGTATGACACTTACTT+CGG + tig0020703:38342-38361 None:intergenic 35.0%
GCTTCTTCTTTACTTCCAAA+AGG + tig0020703:38488-38507 None:intergenic 35.0%
TGACAACGTTTCATGAATCT+AGG + tig0020703:38705-38724 None:intergenic 35.0%
! TTTTGCGGTTTTCGGTTTTT+TGG - tig0020703:38926-38945 Msa1385010:CDS 35.0%
!!! CGGTTTTTTGGATTAGTTTG+CGG - tig0020703:38938-38957 Msa1385010:CDS 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - tig0020703:38959-38978 Msa1385010:CDS 35.0%
! GTATCCTCATATTGCTATTG+GGG - tig0020703:39114-39133 Msa1385010:intron 35.0%
! ATGTCATAGAAAGTTTCTGG+TGG + tig0020703:39184-39203 None:intergenic 35.0%
CGAACTTACCTTAAAACCAT+TGG + tig0020703:39212-39231 None:intergenic 35.0%
ATGGGATGACATAGAATCAA+AGG - tig0020703:39368-39387 Msa1385010:intron 35.0%
TGGGATGACATAGAATCAAA+GGG - tig0020703:39369-39388 Msa1385010:intron 35.0%
!! TAAAGAGCACTGAAGATCTA+TGG - tig0020703:39560-39579 Msa1385010:intron 35.0%
GGAGTCTGCATATAGTTATT+TGG - tig0020703:39591-39610 Msa1385010:intron 35.0%
TCAAACTAACCTCCTTGATA+GGG + tig0020703:39669-39688 None:intergenic 35.0%
ATCAAACTAACCTCCTTGAT+AGG + tig0020703:39670-39689 None:intergenic 35.0%
!!! ACTGTTTTTTATGATGCTGC+TGG - tig0020703:39763-39782 Msa1385010:intron 35.0%
!!! CTGTTTTTTATGATGCTGCT+GGG - tig0020703:39764-39783 Msa1385010:intron 35.0%
! TGCTGGGAAATTGACTTTAA+TGG - tig0020703:39780-39799 Msa1385010:intron 35.0%
! TGGGAAATTGACTTTAATGG+TGG - tig0020703:39783-39802 Msa1385010:intron 35.0%
! CTAGCAGTGTTGTTAAATAG+TGG - tig0020703:39812-39831 Msa1385010:intron 35.0%
GTAGAAAACAGTAGCTATAG+CGG - tig0020703:39907-39926 Msa1385010:intron 35.0%
!! GGTTTACAATACTGGTTTCT+AGG - tig0020703:39987-40006 Msa1385010:intron 35.0%
! CTGGTTTCTAGGAATATGTT+TGG - tig0020703:39998-40017 Msa1385010:intron 35.0%
!! TTATAAACCCAAGAGTGCTA+GGG - tig0020703:40454-40473 Msa1385010:CDS 35.0%
CGTTAAACTTAAAACTCTCG+AGG - tig0020703:40535-40554 Msa1385010:intron 35.0%
AAACTTAAAACTCTCGAGGT+AGG - tig0020703:40539-40558 Msa1385010:intron 35.0%
AACTTAAAACTCTCGAGGTA+GGG - tig0020703:40540-40559 Msa1385010:intron 35.0%
AAGATAGTCAGATTCCTTTC+TGG + tig0020703:40773-40792 None:intergenic 35.0%
TACTTTAACAGGTTTGCAGA+AGG - tig0020703:40810-40829 Msa1385010:intron 35.0%
GTTTGCAGAAGGATAGATAA+AGG - tig0020703:40821-40840 Msa1385010:intron 35.0%
! TGTTTTTCCTTAGTTGTTGC+TGG - tig0020703:40990-41009 Msa1385010:intron 35.0%
TACTTATCCAGCAACAACTA+AGG + tig0020703:41000-41019 None:intergenic 35.0%
! ATTCCATCTTTTCTTGTCCA+TGG - tig0020703:41050-41069 Msa1385010:intron 35.0%
TAATTACTCTTCTTTCCGAG+AGG - tig0020703:41146-41165 Msa1385010:intron 35.0%
GGATTACTACAGTATTTGGA+GGG - tig0020703:41208-41227 Msa1385010:CDS 35.0%
! TCACCTGTTATTTATGTGAC+TGG - tig0020703:41296-41315 Msa1385010:CDS 35.0%
CGTAAAACATTATTGCTTGC+TGG + tig0020703:41470-41489 None:intergenic 35.0%
! CAAGCAATAATGTTTTACGG+TGG - tig0020703:41471-41490 Msa1385010:intron 35.0%
!! AATTTGACTTGTCTGTTGCA+TGG - tig0020703:41602-41621 Msa1385010:CDS 35.0%
CAACAGTAAATGATCCTGAT+TGG - tig0020703:41686-41705 Msa1385010:CDS 35.0%
AGTAAATGATCCTGATTGGT+TGG - tig0020703:41690-41709 Msa1385010:CDS 35.0%
! TTGTATTAGCTTGATCTCAG+TGG + tig0020703:41728-41747 None:intergenic 35.0%
ACTGAGATCAAGCTAATACA+AGG - tig0020703:41727-41746 Msa1385010:CDS 35.0%
AGATCAAGCTAATACAAGGA+TGG - tig0020703:41731-41750 Msa1385010:CDS 35.0%
! TGCAAGTATTGTTCAGACTA+GGG + tig0020703:41877-41896 None:intergenic 35.0%
TAGTCTGAACAATACTTGCA+GGG - tig0020703:41877-41896 Msa1385010:CDS 35.0%
TGTGTGTGTATATAACTGAC+TGG - tig0020703:41928-41947 Msa1385010:five_prime_UTR 35.0%
TGTGATTCAAAGCAAAAGCT+TGG + tig0020703:38025-38044 None:intergenic 35.0%
ACCTTATCAACACAGAAAAC+TGG - tig0020703:38195-38214 Msa1385010:CDS 35.0%
CCTTATCAACACAGAAAACT+GGG - tig0020703:38196-38215 Msa1385010:CDS 35.0%
! TTCCTCTATTGTGGTAATGA+AGG - tig0020703:38239-38258 Msa1385010:intron 35.0%
GTAATGAAGGTGACATTGTT+TGG - tig0020703:38252-38271 Msa1385010:intron 35.0%
!!! CTCAAAACACTGGTTTTGTT+TGG - tig0020703:38279-38298 Msa1385010:intron 35.0%
ACAGAGTATGACACTTACTT+CGG + tig0020703:38342-38361 None:intergenic 35.0%
GCTTCTTCTTTACTTCCAAA+AGG + tig0020703:38488-38507 None:intergenic 35.0%
TGACAACGTTTCATGAATCT+AGG + tig0020703:38705-38724 None:intergenic 35.0%
! TTTTGCGGTTTTCGGTTTTT+TGG - tig0020703:38926-38945 Msa1385010:CDS 35.0%
!!! CGGTTTTTTGGATTAGTTTG+CGG - tig0020703:38938-38957 Msa1385010:CDS 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - tig0020703:38959-38978 Msa1385010:CDS 35.0%
! GTATCCTCATATTGCTATTG+GGG - tig0020703:39114-39133 Msa1385010:intron 35.0%
! ATGTCATAGAAAGTTTCTGG+TGG + tig0020703:39184-39203 None:intergenic 35.0%
CGAACTTACCTTAAAACCAT+TGG + tig0020703:39212-39231 None:intergenic 35.0%
ATGGGATGACATAGAATCAA+AGG - tig0020703:39368-39387 Msa1385010:intron 35.0%
TGGGATGACATAGAATCAAA+GGG - tig0020703:39369-39388 Msa1385010:intron 35.0%
!! TAAAGAGCACTGAAGATCTA+TGG - tig0020703:39560-39579 Msa1385010:intron 35.0%
GGAGTCTGCATATAGTTATT+TGG - tig0020703:39591-39610 Msa1385010:intron 35.0%
TCAAACTAACCTCCTTGATA+GGG + tig0020703:39669-39688 None:intergenic 35.0%
ATCAAACTAACCTCCTTGAT+AGG + tig0020703:39670-39689 None:intergenic 35.0%
!!! ACTGTTTTTTATGATGCTGC+TGG - tig0020703:39763-39782 Msa1385010:intron 35.0%
!!! CTGTTTTTTATGATGCTGCT+GGG - tig0020703:39764-39783 Msa1385010:intron 35.0%
! TGCTGGGAAATTGACTTTAA+TGG - tig0020703:39780-39799 Msa1385010:intron 35.0%
! TGGGAAATTGACTTTAATGG+TGG - tig0020703:39783-39802 Msa1385010:intron 35.0%
! CTAGCAGTGTTGTTAAATAG+TGG - tig0020703:39812-39831 Msa1385010:intron 35.0%
GTAGAAAACAGTAGCTATAG+CGG - tig0020703:39907-39926 Msa1385010:intron 35.0%
!! GGTTTACAATACTGGTTTCT+AGG - tig0020703:39987-40006 Msa1385010:intron 35.0%
! CTGGTTTCTAGGAATATGTT+TGG - tig0020703:39998-40017 Msa1385010:intron 35.0%
!! TTATAAACCCAAGAGTGCTA+GGG - tig0020703:40454-40473 Msa1385010:CDS 35.0%
CGTTAAACTTAAAACTCTCG+AGG - tig0020703:40535-40554 Msa1385010:intron 35.0%
AAACTTAAAACTCTCGAGGT+AGG - tig0020703:40539-40558 Msa1385010:intron 35.0%
AACTTAAAACTCTCGAGGTA+GGG - tig0020703:40540-40559 Msa1385010:intron 35.0%
AAGATAGTCAGATTCCTTTC+TGG + tig0020703:40773-40792 None:intergenic 35.0%
TACTTTAACAGGTTTGCAGA+AGG - tig0020703:40810-40829 Msa1385010:intron 35.0%
GTTTGCAGAAGGATAGATAA+AGG - tig0020703:40821-40840 Msa1385010:intron 35.0%
! TGTTTTTCCTTAGTTGTTGC+TGG - tig0020703:40990-41009 Msa1385010:intron 35.0%
TACTTATCCAGCAACAACTA+AGG + tig0020703:41000-41019 None:intergenic 35.0%
! ATTCCATCTTTTCTTGTCCA+TGG - tig0020703:41050-41069 Msa1385010:intron 35.0%
TAATTACTCTTCTTTCCGAG+AGG - tig0020703:41146-41165 Msa1385010:intron 35.0%
GGATTACTACAGTATTTGGA+GGG - tig0020703:41208-41227 Msa1385010:CDS 35.0%
! TCACCTGTTATTTATGTGAC+TGG - tig0020703:41296-41315 Msa1385010:CDS 35.0%
CGTAAAACATTATTGCTTGC+TGG + tig0020703:41470-41489 None:intergenic 35.0%
! CAAGCAATAATGTTTTACGG+TGG - tig0020703:41471-41490 Msa1385010:intron 35.0%
!! AATTTGACTTGTCTGTTGCA+TGG - tig0020703:41602-41621 Msa1385010:CDS 35.0%
CAACAGTAAATGATCCTGAT+TGG - tig0020703:41686-41705 Msa1385010:CDS 35.0%
AGTAAATGATCCTGATTGGT+TGG - tig0020703:41690-41709 Msa1385010:CDS 35.0%
! TTGTATTAGCTTGATCTCAG+TGG + tig0020703:41728-41747 None:intergenic 35.0%
ACTGAGATCAAGCTAATACA+AGG - tig0020703:41727-41746 Msa1385010:CDS 35.0%
AGATCAAGCTAATACAAGGA+TGG - tig0020703:41731-41750 Msa1385010:CDS 35.0%
! TGCAAGTATTGTTCAGACTA+GGG + tig0020703:41877-41896 None:intergenic 35.0%
TAGTCTGAACAATACTTGCA+GGG - tig0020703:41877-41896 Msa1385010:CDS 35.0%
TGTGTGTGTATATAACTGAC+TGG - tig0020703:41928-41947 Msa1385010:five_prime_UTR 35.0%
! AAGAGTGGAAATGAGTGTTG+TGG + tig0020703:37979-37998 None:intergenic 40.0%
!! TCGTAGTGGATATCCAATTG+TGG + tig0020703:38107-38126 None:intergenic 40.0%
! GGAAGAATTTGGTTTCGTAG+TGG + tig0020703:38121-38140 None:intergenic 40.0%
GAGTCGTTGTTGGAAGAATT+TGG + tig0020703:38132-38151 None:intergenic 40.0%
AGGTCTTGAAAAAGCTGAAG+TGG + tig0020703:38157-38176 None:intergenic 40.0%
! TGTTGATAAGGTAGCGTTGA+GGG + tig0020703:38187-38206 None:intergenic 40.0%
!! CCCAGTTTTCTGTGTTGATA+AGG + tig0020703:38199-38218 None:intergenic 40.0%
CACCTTCATTACCACAATAG+AGG + tig0020703:38244-38263 None:intergenic 40.0%
!! GTTTGGTTTGCTCAAAACAC+TGG - tig0020703:38269-38288 Msa1385010:intron 40.0%
AGAGTATGACACTTACTTCG+GGG + tig0020703:38340-38359 None:intergenic 40.0%
CAGAGTATGACACTTACTTC+GGG + tig0020703:38341-38360 None:intergenic 40.0%
AGCATTAAGATACCCTAACG+TGG + tig0020703:38525-38544 None:intergenic 40.0%
! TAAGACAACAGGAGAAGCAT+TGG + tig0020703:38606-38625 None:intergenic 40.0%
! GCTTCTCCTGTTGTCTTATT+TGG - tig0020703:38608-38627 Msa1385010:intron 40.0%
!! TCTCCTGTTGTCTTATTTGG+AGG - tig0020703:38611-38630 Msa1385010:intron 40.0%
GATCCTCCAAATAAGACAAC+AGG + tig0020703:38617-38636 None:intergenic 40.0%
!! GTCTTATTTGGAGGATCCTA+TGG - tig0020703:38620-38639 Msa1385010:intron 40.0%
TTATTTGGAGGATCCTATGG+TGG - tig0020703:38623-38642 Msa1385010:intron 40.0%
GTTTGATGGAAAGAGGGTAA+TGG + tig0020703:38886-38905 None:intergenic 40.0%
!!! ATTCGGTGTTTTGCGGTTTT+CGG - tig0020703:38918-38937 Msa1385010:CDS 40.0%
ACCTTATGAGCTTCTAGTAG+GGG + tig0020703:38994-39013 None:intergenic 40.0%
CACCTTATGAGCTTCTAGTA+GGG + tig0020703:38995-39014 None:intergenic 40.0%
ACACCTTATGAGCTTCTAGT+AGG + tig0020703:38996-39015 None:intergenic 40.0%
GTTTATCAGTGTTAGCAGCA+TGG - tig0020703:39080-39099 Msa1385010:intron 40.0%
TCAAAGGGTCAAACAAGTGA+TGG - tig0020703:39384-39403 Msa1385010:intron 40.0%
GACATAAACACACGCTTCTT+AGG + tig0020703:39459-39478 None:intergenic 40.0%
TGAAGATCTATGGAACTGGT+TGG - tig0020703:39570-39589 Msa1385010:intron 40.0%
! TCAAGAACTCAGAAGGGTAT+GGG + tig0020703:39630-39649 None:intergenic 40.0%
ATCAAGAACTCAGAAGGGTA+TGG + tig0020703:39631-39650 None:intergenic 40.0%
! AAGGCATCAAGAACTCAGAA+GGG + tig0020703:39636-39655 None:intergenic 40.0%
!! AAAGGCATCAAGAACTCAGA+AGG + tig0020703:39637-39656 None:intergenic 40.0%
! GTTATAGCTCTATAGCGTAG+CGG - tig0020703:39845-39864 Msa1385010:intron 40.0%
CAATTCGCGGTTTACAATAC+TGG - tig0020703:39979-39998 Msa1385010:intron 40.0%
! TGGTCTCTTATCTGACTTGA+AGG - tig0020703:40018-40037 Msa1385010:intron 40.0%
CTAGCACTCTTGGGTTTATA+AGG + tig0020703:40455-40474 None:intergenic 40.0%
!! CTTATAAACCCAAGAGTGCT+AGG - tig0020703:40453-40472 Msa1385010:CDS 40.0%
CGTTGTTCTATTCCTAGGAT+TGG + tig0020703:40517-40536 None:intergenic 40.0%
TTCCTATTCGAAGTCCAGAA+AGG - tig0020703:40756-40775 Msa1385010:CDS 40.0%
TTCCTTTCTGGACTTCGAAT+AGG + tig0020703:40761-40780 None:intergenic 40.0%
ACACCATGGACAAGAAAAGA+TGG + tig0020703:41056-41075 None:intergenic 40.0%
! TCTTTTCTTGTCCATGGTGT+AGG - tig0020703:41056-41075 Msa1385010:intron 40.0%
GTGGAAACATGCTGAACTTT+CGG + tig0020703:41116-41135 None:intergenic 40.0%
AATTCTTGAGGCAATCCTCT+CGG + tig0020703:41164-41183 None:intergenic 40.0%
GAGGATTGCCTCAAGAATTT+CGG - tig0020703:41165-41184 Msa1385010:intron 40.0%
CGGATTACTACAGTATTTGG+AGG - tig0020703:41207-41226 Msa1385010:CDS 40.0%
AGAATATCCATCTCACGTTG+AGG - tig0020703:41333-41352 Msa1385010:CDS 40.0%
CAAATTTCCTCAACGTGAGA+TGG + tig0020703:41343-41362 None:intergenic 40.0%
CATCTCACGTTGAGGAAATT+TGG - tig0020703:41341-41360 Msa1385010:CDS 40.0%
!! TGATTGGTTGGTAGAGCAAA+GGG - tig0020703:41702-41721 Msa1385010:CDS 40.0%
AGTATTGTTCAGACTAGGGA+GGG + tig0020703:41873-41892 None:intergenic 40.0%
! AAGTATTGTTCAGACTAGGG+AGG + tig0020703:41874-41893 None:intergenic 40.0%
! CTGCAAGTATTGTTCAGACT+AGG + tig0020703:41878-41897 None:intergenic 40.0%
CTAGTCTGAACAATACTTGC+AGG - tig0020703:41876-41895 Msa1385010:CDS 40.0%
! AAGAGTGGAAATGAGTGTTG+TGG + tig0020703:37979-37998 None:intergenic 40.0%
!! TCGTAGTGGATATCCAATTG+TGG + tig0020703:38107-38126 None:intergenic 40.0%
! GGAAGAATTTGGTTTCGTAG+TGG + tig0020703:38121-38140 None:intergenic 40.0%
GAGTCGTTGTTGGAAGAATT+TGG + tig0020703:38132-38151 None:intergenic 40.0%
AGGTCTTGAAAAAGCTGAAG+TGG + tig0020703:38157-38176 None:intergenic 40.0%
! TGTTGATAAGGTAGCGTTGA+GGG + tig0020703:38187-38206 None:intergenic 40.0%
!! CCCAGTTTTCTGTGTTGATA+AGG + tig0020703:38199-38218 None:intergenic 40.0%
CACCTTCATTACCACAATAG+AGG + tig0020703:38244-38263 None:intergenic 40.0%
!! GTTTGGTTTGCTCAAAACAC+TGG - tig0020703:38269-38288 Msa1385010:intron 40.0%
AGAGTATGACACTTACTTCG+GGG + tig0020703:38340-38359 None:intergenic 40.0%
CAGAGTATGACACTTACTTC+GGG + tig0020703:38341-38360 None:intergenic 40.0%
AGCATTAAGATACCCTAACG+TGG + tig0020703:38525-38544 None:intergenic 40.0%
! TAAGACAACAGGAGAAGCAT+TGG + tig0020703:38606-38625 None:intergenic 40.0%
! GCTTCTCCTGTTGTCTTATT+TGG - tig0020703:38608-38627 Msa1385010:intron 40.0%
!! TCTCCTGTTGTCTTATTTGG+AGG - tig0020703:38611-38630 Msa1385010:intron 40.0%
GATCCTCCAAATAAGACAAC+AGG + tig0020703:38617-38636 None:intergenic 40.0%
!! GTCTTATTTGGAGGATCCTA+TGG - tig0020703:38620-38639 Msa1385010:intron 40.0%
TTATTTGGAGGATCCTATGG+TGG - tig0020703:38623-38642 Msa1385010:intron 40.0%
GTTTGATGGAAAGAGGGTAA+TGG + tig0020703:38886-38905 None:intergenic 40.0%
!!! ATTCGGTGTTTTGCGGTTTT+CGG - tig0020703:38918-38937 Msa1385010:CDS 40.0%
ACCTTATGAGCTTCTAGTAG+GGG + tig0020703:38994-39013 None:intergenic 40.0%
CACCTTATGAGCTTCTAGTA+GGG + tig0020703:38995-39014 None:intergenic 40.0%
ACACCTTATGAGCTTCTAGT+AGG + tig0020703:38996-39015 None:intergenic 40.0%
GTTTATCAGTGTTAGCAGCA+TGG - tig0020703:39080-39099 Msa1385010:intron 40.0%
TCAAAGGGTCAAACAAGTGA+TGG - tig0020703:39384-39403 Msa1385010:intron 40.0%
GACATAAACACACGCTTCTT+AGG + tig0020703:39459-39478 None:intergenic 40.0%
TGAAGATCTATGGAACTGGT+TGG - tig0020703:39570-39589 Msa1385010:intron 40.0%
! TCAAGAACTCAGAAGGGTAT+GGG + tig0020703:39630-39649 None:intergenic 40.0%
ATCAAGAACTCAGAAGGGTA+TGG + tig0020703:39631-39650 None:intergenic 40.0%
! AAGGCATCAAGAACTCAGAA+GGG + tig0020703:39636-39655 None:intergenic 40.0%
!! AAAGGCATCAAGAACTCAGA+AGG + tig0020703:39637-39656 None:intergenic 40.0%
! GTTATAGCTCTATAGCGTAG+CGG - tig0020703:39845-39864 Msa1385010:intron 40.0%
CAATTCGCGGTTTACAATAC+TGG - tig0020703:39979-39998 Msa1385010:intron 40.0%
! TGGTCTCTTATCTGACTTGA+AGG - tig0020703:40018-40037 Msa1385010:intron 40.0%
CTAGCACTCTTGGGTTTATA+AGG + tig0020703:40455-40474 None:intergenic 40.0%
!! CTTATAAACCCAAGAGTGCT+AGG - tig0020703:40453-40472 Msa1385010:CDS 40.0%
CGTTGTTCTATTCCTAGGAT+TGG + tig0020703:40517-40536 None:intergenic 40.0%
TTCCTATTCGAAGTCCAGAA+AGG - tig0020703:40756-40775 Msa1385010:CDS 40.0%
TTCCTTTCTGGACTTCGAAT+AGG + tig0020703:40761-40780 None:intergenic 40.0%
ACACCATGGACAAGAAAAGA+TGG + tig0020703:41056-41075 None:intergenic 40.0%
! TCTTTTCTTGTCCATGGTGT+AGG - tig0020703:41056-41075 Msa1385010:intron 40.0%
GTGGAAACATGCTGAACTTT+CGG + tig0020703:41116-41135 None:intergenic 40.0%
AATTCTTGAGGCAATCCTCT+CGG + tig0020703:41164-41183 None:intergenic 40.0%
GAGGATTGCCTCAAGAATTT+CGG - tig0020703:41165-41184 Msa1385010:intron 40.0%
CGGATTACTACAGTATTTGG+AGG - tig0020703:41207-41226 Msa1385010:CDS 40.0%
AGAATATCCATCTCACGTTG+AGG - tig0020703:41333-41352 Msa1385010:CDS 40.0%
CAAATTTCCTCAACGTGAGA+TGG + tig0020703:41343-41362 None:intergenic 40.0%
CATCTCACGTTGAGGAAATT+TGG - tig0020703:41341-41360 Msa1385010:CDS 40.0%
!! TGATTGGTTGGTAGAGCAAA+GGG - tig0020703:41702-41721 Msa1385010:CDS 40.0%
AGTATTGTTCAGACTAGGGA+GGG + tig0020703:41873-41892 None:intergenic 40.0%
! AAGTATTGTTCAGACTAGGG+AGG + tig0020703:41874-41893 None:intergenic 40.0%
! CTGCAAGTATTGTTCAGACT+AGG + tig0020703:41878-41897 None:intergenic 40.0%
CTAGTCTGAACAATACTTGC+AGG - tig0020703:41876-41895 Msa1385010:CDS 40.0%
! GTGTTGATAAGGTAGCGTTG+AGG + tig0020703:38188-38207 None:intergenic 45.0%
AACACAGAAAACTGGGTCGT+TGG - tig0020703:38203-38222 Msa1385010:intron 45.0%
AGAAAACTGGGTCGTTGGAT+CGG - tig0020703:38208-38227 Msa1385010:intron 45.0%
! GGTCCCATTTTCCTCTATTG+TGG - tig0020703:38230-38249 Msa1385010:intron 45.0%
CATACTCTGTAACACTCCTC+CGG - tig0020703:38352-38371 Msa1385010:intron 45.0%
! TATGGTGAGTCTGTGCCTTT+TGG - tig0020703:38470-38489 Msa1385010:CDS 45.0%
ACCCCTACTAGAAGCTCATA+AGG - tig0020703:38990-39009 Msa1385010:CDS 45.0%
AGTGCCCCAATAGCAATATG+AGG + tig0020703:39121-39140 None:intergenic 45.0%
GCACTGAAGATCTATGGAAC+TGG - tig0020703:39566-39585 Msa1385010:intron 45.0%
CCACTACTTTCAGCAATTCG+CGG - tig0020703:39966-39985 Msa1385010:intron 45.0%
TTGTCCTTGACAAAGCTTGC+AGG - tig0020703:40131-40150 Msa1385010:intron 45.0%
! TTGTCCTGCAAGCTTTGTCA+AGG + tig0020703:40138-40157 None:intergenic 45.0%
CTAGGATTGGATTCGAATGC+AGG + tig0020703:40504-40523 None:intergenic 45.0%
CTGCATTCGAATCCAATCCT+AGG - tig0020703:40502-40521 Msa1385010:CDS 45.0%
GTTAATCCGTCAAGTCAGGT+AGG + tig0020703:40584-40603 None:intergenic 45.0%
TATACTGGAGCGCATATACG+AGG - tig0020703:40859-40878 Msa1385010:intron 45.0%
ATACTGGAGCGCATATACGA+GGG - tig0020703:40860-40879 Msa1385010:intron 45.0%
GAACTGGATGATGATCCTCA+TGG - tig0020703:40926-40945 Msa1385010:intron 45.0%
TCTGAGTGGTTGGAACTTTC+AGG - tig0020703:40949-40968 Msa1385010:intron 45.0%
AACTTTCGGCTGCTAGACAT+CGG + tig0020703:41102-41121 None:intergenic 45.0%
GCTTCACTCCGAAATTCTTG+AGG + tig0020703:41176-41195 None:intergenic 45.0%
AGAATTTCGGAGTGAAGCCA+AGG - tig0020703:41178-41197 Msa1385010:intron 45.0%
!! GTAGTAATCCGTTTTGGCCT+TGG + tig0020703:41198-41217 None:intergenic 45.0%
CAAATGGCCTATTGGATCCA+TGG - tig0020703:41381-41400 Msa1385010:CDS 45.0%
GTTTCTCTGGTGACTGAAGA+AGG - tig0020703:41558-41577 Msa1385010:CDS 45.0%
CTTTGCTCTACCAACCAATC+AGG + tig0020703:41703-41722 None:intergenic 45.0%
!! CTGATTGGTTGGTAGAGCAA+AGG - tig0020703:41701-41720 Msa1385010:CDS 45.0%
! GTGTTGATAAGGTAGCGTTG+AGG + tig0020703:38188-38207 None:intergenic 45.0%
AACACAGAAAACTGGGTCGT+TGG - tig0020703:38203-38222 Msa1385010:intron 45.0%
AGAAAACTGGGTCGTTGGAT+CGG - tig0020703:38208-38227 Msa1385010:intron 45.0%
! GGTCCCATTTTCCTCTATTG+TGG - tig0020703:38230-38249 Msa1385010:intron 45.0%
CATACTCTGTAACACTCCTC+CGG - tig0020703:38352-38371 Msa1385010:intron 45.0%
! TATGGTGAGTCTGTGCCTTT+TGG - tig0020703:38470-38489 Msa1385010:CDS 45.0%
ACCCCTACTAGAAGCTCATA+AGG - tig0020703:38990-39009 Msa1385010:CDS 45.0%
AGTGCCCCAATAGCAATATG+AGG + tig0020703:39121-39140 None:intergenic 45.0%
GCACTGAAGATCTATGGAAC+TGG - tig0020703:39566-39585 Msa1385010:intron 45.0%
CCACTACTTTCAGCAATTCG+CGG - tig0020703:39966-39985 Msa1385010:intron 45.0%
TTGTCCTTGACAAAGCTTGC+AGG - tig0020703:40131-40150 Msa1385010:intron 45.0%
! TTGTCCTGCAAGCTTTGTCA+AGG + tig0020703:40138-40157 None:intergenic 45.0%
CTAGGATTGGATTCGAATGC+AGG + tig0020703:40504-40523 None:intergenic 45.0%
CTGCATTCGAATCCAATCCT+AGG - tig0020703:40502-40521 Msa1385010:CDS 45.0%
GTTAATCCGTCAAGTCAGGT+AGG + tig0020703:40584-40603 None:intergenic 45.0%
TATACTGGAGCGCATATACG+AGG - tig0020703:40859-40878 Msa1385010:intron 45.0%
ATACTGGAGCGCATATACGA+GGG - tig0020703:40860-40879 Msa1385010:intron 45.0%
GAACTGGATGATGATCCTCA+TGG - tig0020703:40926-40945 Msa1385010:intron 45.0%
TCTGAGTGGTTGGAACTTTC+AGG - tig0020703:40949-40968 Msa1385010:intron 45.0%
AACTTTCGGCTGCTAGACAT+CGG + tig0020703:41102-41121 None:intergenic 45.0%
GCTTCACTCCGAAATTCTTG+AGG + tig0020703:41176-41195 None:intergenic 45.0%
AGAATTTCGGAGTGAAGCCA+AGG - tig0020703:41178-41197 Msa1385010:intron 45.0%
!! GTAGTAATCCGTTTTGGCCT+TGG + tig0020703:41198-41217 None:intergenic 45.0%
CAAATGGCCTATTGGATCCA+TGG - tig0020703:41381-41400 Msa1385010:CDS 45.0%
GTTTCTCTGGTGACTGAAGA+AGG - tig0020703:41558-41577 Msa1385010:CDS 45.0%
CTTTGCTCTACCAACCAATC+AGG + tig0020703:41703-41722 None:intergenic 45.0%
!! CTGATTGGTTGGTAGAGCAA+AGG - tig0020703:41701-41720 Msa1385010:CDS 45.0%
TGACTGTGACTGAGAGGGTT+TGG + tig0020703:38081-38100 None:intergenic 50.0%
GTCACAGTCACAGCCACAAT+TGG - tig0020703:38091-38110 Msa1385010:CDS 50.0%
TGAAGTGGTCGAGTCGTTGT+TGG + tig0020703:38142-38161 None:intergenic 50.0%
GAAAACTGGGTCGTTGGATC+GGG - tig0020703:38209-38228 Msa1385010:intron 50.0%
TGGGAAATCGCTCCGAAGTT+CGG - tig0020703:38299-38318 Msa1385010:CDS 50.0%
TACTTCGGGGAAAACGACCA+TGG + tig0020703:38327-38346 None:intergenic 50.0%
GAGCGTCTTACTTCCACCAT+AGG + tig0020703:38639-38658 None:intergenic 50.0%
GAGTTCTTGATGCCTTTGCC+TGG - tig0020703:39640-39659 Msa1385010:intron 50.0%
! TTGATAGGGTGTCCAGGCAA+AGG + tig0020703:39655-39674 None:intergenic 50.0%
TTTGCCTGGACACCCTATCA+AGG - tig0020703:39654-39673 Msa1385010:intron 50.0%
GTTAACAGTGCGGCTGAGTT+AGG + tig0020703:39719-39738 None:intergenic 50.0%
CCGCGAATTGCTGAAAGTAG+TGG + tig0020703:39969-39988 None:intergenic 50.0%
TGTGGACCTTCACGTAGTCA+CGG - tig0020703:40054-40073 Msa1385010:intron 50.0%
CATCTCACCCTAGCACTCTT+GGG + tig0020703:40464-40483 None:intergenic 50.0%
AGTGCTAGGGTGAGATGGTT+CGG - tig0020703:40467-40486 Msa1385010:CDS 50.0%
! TGAGATGGTTCGGGTCTCTT+AGG - tig0020703:40477-40496 Msa1385010:CDS 50.0%
AGGTAGGGTTATGCGCTCAT+TGG - tig0020703:40555-40574 Msa1385010:intron 50.0%
GGTAGGGTTATGCGCTCATT+GGG - tig0020703:40556-40575 Msa1385010:intron 50.0%
GTAGGGTTATGCGCTCATTG+GGG - tig0020703:40557-40576 Msa1385010:intron 50.0%
CGAGGTTAATCCGTCAAGTC+AGG + tig0020703:40588-40607 None:intergenic 50.0%
ATTAACCTCGTGTGCGCGAA+AGG - tig0020703:40598-40617 Msa1385010:intron 50.0%
AGGATAGATAAAGGCCCTGC+TGG - tig0020703:40830-40849 Msa1385010:intron 50.0%
GGATAGATAAAGGCCCTGCT+GGG - tig0020703:40831-40850 Msa1385010:intron 50.0%
CCAGTATACTAGTCCCAGCA+GGG + tig0020703:40847-40866 None:intergenic 50.0%
TCCAGTATACTAGTCCCAGC+AGG + tig0020703:40848-40867 None:intergenic 50.0%
TACTGGAGCGCATATACGAG+GGG - tig0020703:40861-40880 Msa1385010:intron 50.0%
GATGATCCTCATGGTCTGAG+TGG - tig0020703:40935-40954 Msa1385010:intron 50.0%
ATCCTCATGGTCTGAGTGGT+TGG - tig0020703:40939-40958 Msa1385010:intron 50.0%
TTCCAACCACTCAGACCATG+AGG + tig0020703:40944-40963 None:intergenic 50.0%
TTCAGTGCATGCCTACACCA+TGG + tig0020703:41070-41089 None:intergenic 50.0%
GGTGTAGGCATGCACTGAAA+TGG - tig0020703:41071-41090 Msa1385010:intron 50.0%
GAGTGAAGCCAAGGCCAAAA+CGG - tig0020703:41187-41206 Msa1385010:CDS 50.0%
CACCACTCCATGGATCCAAT+AGG + tig0020703:41391-41410 None:intergenic 50.0%
CTATTGGATCCATGGAGTGG+TGG - tig0020703:41389-41408 Msa1385010:CDS 50.0%
TTGTTCAGACTAGGGAGGGT+GGG + tig0020703:41869-41888 None:intergenic 50.0%
ATTGTTCAGACTAGGGAGGG+TGG + tig0020703:41870-41889 None:intergenic 50.0%
TGACTGTGACTGAGAGGGTT+TGG + tig0020703:38081-38100 None:intergenic 50.0%
GTCACAGTCACAGCCACAAT+TGG - tig0020703:38091-38110 Msa1385010:CDS 50.0%
TGAAGTGGTCGAGTCGTTGT+TGG + tig0020703:38142-38161 None:intergenic 50.0%
GAAAACTGGGTCGTTGGATC+GGG - tig0020703:38209-38228 Msa1385010:intron 50.0%
TGGGAAATCGCTCCGAAGTT+CGG - tig0020703:38299-38318 Msa1385010:CDS 50.0%
TACTTCGGGGAAAACGACCA+TGG + tig0020703:38327-38346 None:intergenic 50.0%
GAGCGTCTTACTTCCACCAT+AGG + tig0020703:38639-38658 None:intergenic 50.0%
GAGTTCTTGATGCCTTTGCC+TGG - tig0020703:39640-39659 Msa1385010:intron 50.0%
! TTGATAGGGTGTCCAGGCAA+AGG + tig0020703:39655-39674 None:intergenic 50.0%
TTTGCCTGGACACCCTATCA+AGG - tig0020703:39654-39673 Msa1385010:intron 50.0%
GTTAACAGTGCGGCTGAGTT+AGG + tig0020703:39719-39738 None:intergenic 50.0%
CCGCGAATTGCTGAAAGTAG+TGG + tig0020703:39969-39988 None:intergenic 50.0%
TGTGGACCTTCACGTAGTCA+CGG - tig0020703:40054-40073 Msa1385010:intron 50.0%
CATCTCACCCTAGCACTCTT+GGG + tig0020703:40464-40483 None:intergenic 50.0%
AGTGCTAGGGTGAGATGGTT+CGG - tig0020703:40467-40486 Msa1385010:CDS 50.0%
! TGAGATGGTTCGGGTCTCTT+AGG - tig0020703:40477-40496 Msa1385010:CDS 50.0%
AGGTAGGGTTATGCGCTCAT+TGG - tig0020703:40555-40574 Msa1385010:intron 50.0%
GGTAGGGTTATGCGCTCATT+GGG - tig0020703:40556-40575 Msa1385010:intron 50.0%
GTAGGGTTATGCGCTCATTG+GGG - tig0020703:40557-40576 Msa1385010:intron 50.0%
CGAGGTTAATCCGTCAAGTC+AGG + tig0020703:40588-40607 None:intergenic 50.0%
ATTAACCTCGTGTGCGCGAA+AGG - tig0020703:40598-40617 Msa1385010:intron 50.0%
AGGATAGATAAAGGCCCTGC+TGG - tig0020703:40830-40849 Msa1385010:intron 50.0%
GGATAGATAAAGGCCCTGCT+GGG - tig0020703:40831-40850 Msa1385010:intron 50.0%
CCAGTATACTAGTCCCAGCA+GGG + tig0020703:40847-40866 None:intergenic 50.0%
TCCAGTATACTAGTCCCAGC+AGG + tig0020703:40848-40867 None:intergenic 50.0%
TACTGGAGCGCATATACGAG+GGG - tig0020703:40861-40880 Msa1385010:intron 50.0%
GATGATCCTCATGGTCTGAG+TGG - tig0020703:40935-40954 Msa1385010:intron 50.0%
ATCCTCATGGTCTGAGTGGT+TGG - tig0020703:40939-40958 Msa1385010:intron 50.0%
TTCCAACCACTCAGACCATG+AGG + tig0020703:40944-40963 None:intergenic 50.0%
TTCAGTGCATGCCTACACCA+TGG + tig0020703:41070-41089 None:intergenic 50.0%
GGTGTAGGCATGCACTGAAA+TGG - tig0020703:41071-41090 Msa1385010:intron 50.0%
GAGTGAAGCCAAGGCCAAAA+CGG - tig0020703:41187-41206 Msa1385010:CDS 50.0%
CACCACTCCATGGATCCAAT+AGG + tig0020703:41391-41410 None:intergenic 50.0%
CTATTGGATCCATGGAGTGG+TGG - tig0020703:41389-41408 Msa1385010:CDS 50.0%
TTGTTCAGACTAGGGAGGGT+GGG + tig0020703:41869-41888 None:intergenic 50.0%
ATTGTTCAGACTAGGGAGGG+TGG + tig0020703:41870-41889 None:intergenic 50.0%
GGCTGTGACTGTGACTGAGA+GGG + tig0020703:38086-38105 None:intergenic 55.0%
TGGCTGTGACTGTGACTGAG+AGG + tig0020703:38087-38106 None:intergenic 55.0%
! GTAGCGTTGAGGGAACGTAG+AGG + tig0020703:38177-38196 None:intergenic 55.0%
ACGACCATGGCTCCGAACTT+CGG + tig0020703:38314-38333 None:intergenic 55.0%
! ACCTCCTTGATAGGGTGTCC+AGG + tig0020703:39661-39680 None:intergenic 55.0%
GTGGACCTTCACGTAGTCAC+GGG - tig0020703:40055-40074 Msa1385010:intron 55.0%
CTAGACCCGTGACTACGTGA+AGG + tig0020703:40063-40082 None:intergenic 55.0%
CCATCTCACCCTAGCACTCT+TGG + tig0020703:40465-40484 None:intergenic 55.0%
!! CCAAGAGTGCTAGGGTGAGA+TGG - tig0020703:40462-40481 Msa1385010:CDS 55.0%
GTGCTAGGGTGAGATGGTTC+GGG - tig0020703:40468-40487 Msa1385010:CDS 55.0%
! TGGGGTCCTACCTGACTTGA+CGG - tig0020703:40575-40594 Msa1385010:intron 55.0%
! CCCTGCTGGGACTAGTATAC+TGG - tig0020703:40844-40863 Msa1385010:intron 55.0%
ACTGGAGCGCATATACGAGG+GGG - tig0020703:40862-40881 Msa1385010:intron 55.0%
GGCCTATTGGATCCATGGAG+TGG - tig0020703:41386-41405 Msa1385010:CDS 55.0%
TATCACCTGCCACCACTCCA+TGG + tig0020703:41401-41420 None:intergenic 55.0%
GGCTGTGACTGTGACTGAGA+GGG + tig0020703:38086-38105 None:intergenic 55.0%
TGGCTGTGACTGTGACTGAG+AGG + tig0020703:38087-38106 None:intergenic 55.0%
! GTAGCGTTGAGGGAACGTAG+AGG + tig0020703:38177-38196 None:intergenic 55.0%
ACGACCATGGCTCCGAACTT+CGG + tig0020703:38314-38333 None:intergenic 55.0%
! ACCTCCTTGATAGGGTGTCC+AGG + tig0020703:39661-39680 None:intergenic 55.0%
GTGGACCTTCACGTAGTCAC+GGG - tig0020703:40055-40074 Msa1385010:intron 55.0%
CTAGACCCGTGACTACGTGA+AGG + tig0020703:40063-40082 None:intergenic 55.0%
CCATCTCACCCTAGCACTCT+TGG + tig0020703:40465-40484 None:intergenic 55.0%
!! CCAAGAGTGCTAGGGTGAGA+TGG - tig0020703:40462-40481 Msa1385010:CDS 55.0%
GTGCTAGGGTGAGATGGTTC+GGG - tig0020703:40468-40487 Msa1385010:CDS 55.0%
! TGGGGTCCTACCTGACTTGA+CGG - tig0020703:40575-40594 Msa1385010:intron 55.0%
! CCCTGCTGGGACTAGTATAC+TGG - tig0020703:40844-40863 Msa1385010:intron 55.0%
ACTGGAGCGCATATACGAGG+GGG - tig0020703:40862-40881 Msa1385010:intron 55.0%
GGCCTATTGGATCCATGGAG+TGG - tig0020703:41386-41405 Msa1385010:CDS 55.0%
TATCACCTGCCACCACTCCA+TGG + tig0020703:41401-41420 None:intergenic 55.0%
GCCTGGACACCCTATCAAGG+AGG - tig0020703:39657-39676 Msa1385010:intron 60.0%
GGCGTTGCAGCACTGTTGTG+TGG - tig0020703:39928-39947 Msa1385010:intron 60.0%
CGTAGTCACGGGTCTAGACG+TGG - tig0020703:40066-40085 Msa1385010:intron 60.0%
GGATACCTTTCGCGCACACG+AGG + tig0020703:40606-40625 None:intergenic 60.0%
TGGATCCATGGAGTGGTGGC+AGG - tig0020703:41393-41412 Msa1385010:CDS 60.0%
GCCTGGACACCCTATCAAGG+AGG - tig0020703:39657-39676 Msa1385010:intron 60.0%
GGCGTTGCAGCACTGTTGTG+TGG - tig0020703:39928-39947 Msa1385010:intron 60.0%
CGTAGTCACGGGTCTAGACG+TGG - tig0020703:40066-40085 Msa1385010:intron 60.0%
GGATACCTTTCGCGCACACG+AGG + tig0020703:40606-40625 None:intergenic 60.0%
TGGATCCATGGAGTGGTGGC+AGG - tig0020703:41393-41412 Msa1385010:CDS 60.0%
CGCTCCGAAGTTCGGAGCCA+TGG - tig0020703:38307-38326 Msa1385010:CDS 65.0%
CGCTCCGAAGTTCGGAGCCA+TGG - tig0020703:38307-38326 Msa1385010:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0020703 gene 37894 41982 37894 ID=Msa1385010;Name=Msa1385010
tig0020703 mRNA 37894 41982 37894 ID=Msa1385010-mRNA-1;Parent=Msa1385010;Name=Msa1385010-mRNA-1;_AED=0.05;_eAED=0.05;_QI=63|0.88|0.9|1|1|1|10|184|520
tig0020703 exon 37894 38217 37894 ID=Msa1385010-mRNA-1:exon:9410;Parent=Msa1385010-mRNA-1
tig0020703 exon 38297 38346 38297 ID=Msa1385010-mRNA-1:exon:9409;Parent=Msa1385010-mRNA-1
tig0020703 exon 38462 38541 38462 ID=Msa1385010-mRNA-1:exon:9408;Parent=Msa1385010-mRNA-1
tig0020703 exon 38643 38798 38643 ID=Msa1385010-mRNA-1:exon:9407;Parent=Msa1385010-mRNA-1
tig0020703 exon 38906 39055 38906 ID=Msa1385010-mRNA-1:exon:9406;Parent=Msa1385010-mRNA-1
tig0020703 exon 40198 40321 40198 ID=Msa1385010-mRNA-1:exon:9405;Parent=Msa1385010-mRNA-1
tig0020703 exon 40434 40546 40434 ID=Msa1385010-mRNA-1:exon:9404;Parent=Msa1385010-mRNA-1
tig0020703 exon 40654 40787 40654 ID=Msa1385010-mRNA-1:exon:9403;Parent=Msa1385010-mRNA-1
tig0020703 exon 41187 41415 41187 ID=Msa1385010-mRNA-1:exon:9402;Parent=Msa1385010-mRNA-1
tig0020703 exon 41533 41982 41533 ID=Msa1385010-mRNA-1:exon:9401;Parent=Msa1385010-mRNA-1
tig0020703 five_prime_UTR 41920 41982 41920 ID=Msa1385010-mRNA-1:five_prime_utr;Parent=Msa1385010-mRNA-1
tig0020703 CDS 41533 41919 41533 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 41187 41415 41187 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 40654 40787 40654 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 40434 40546 40434 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 40198 40321 40198 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 38906 39055 38906 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 38643 38798 38643 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 38462 38541 38462 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 38297 38346 38297 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 CDS 38078 38217 38078 ID=Msa1385010-mRNA-1:cds;Parent=Msa1385010-mRNA-1
tig0020703 three_prime_UTR 37894 38077 37894 ID=Msa1385010-mRNA-1:three_prime_utr;Parent=Msa1385010-mRNA-1
Gene Sequence

>Msa1385010

ATGGCAACAAAAATCTTCGCCACAACACTCATTTCCACTCTTATCATCATAATCTCTTCTTCACACCAAGCTTTTGCTTTGAATCACACTCCAAAATTCTTTGGTAAATTTTCATCTTCAACCAAACCCTCTCAGTCACAGTCACAGCCACAATTGGATATCCACTACGAAACCAAATTCTTCCAACAACGACTCGACCACTTCAGCTTTTTCAAGACCTCTACGTTCCCTCAACGCTACCTTATCAACACAGAAAACTGGGTCGTTGGATCGGGTCCCATTTTCCTCTATTGTGGTAATGAAGGTGACATTGTTTGGTTTGCTCAAAACACTGGTTTTGTTTGGGAAATCGCTCCGAAGTTCGGAGCCATGGTCGTTTTCCCCGAACATCGATATTATGGTGAGTCTGTGCCTTTTGGAAGTAAAGAAGAAGCTTATAAGAATTCTTCCACGTTAGGGTATCTTAATGCTCAGCAAGCTCTCTTTGATTTCGCTGTTCTTGTTACTGATTTGAAGCGGAATTATTCTGCCAATGCTTCTCCTGTTGTCTTATTTGGAGGATCCTATGGTGGAAGTAAGACGCTCTTTACCTTGTTTCTATTAATTCGAGTAATCGTGTTAGCAGCATGGATGAGACTTAAGTATCCTCATATTGCTATTGGGGCACTAGCATCTTCAGCTCCAATTCTTCAGTTTGAAGACATTGTGCCACCAGAAACTTTCTATGACATTGTTTCCAATGGTTTTAAGCGTGAAAGTTCATCTTGCTTTAACTATATAAAGCAGTCATGGGATGACATAGAATCAAAGGGTCAAACAAGTGATGGCCTTGAACTTCTTACCAAAACATTCAGATTTTGTCAGAAATTAAAGAGCACTGAAGATCTATGGAACTGGTTGGAGTCTGCATATAGTTATTTGGCAATGGTTAACTACCCATACCCTTCTGAGTTCTTGATGCCTTTGCCTGGACACCCTATCAAGGAGGTTTGCAGAAGGATAGATAAAGGCCCTGCTGGGACTAGTATACTGGAGCGCATATACGAGGGGGTGAATGTCTACTACAATTATACTGGAGAAGCTAAATGTTTTGAACTGGATGATGATCCTCATGGTCTGAGTGGTTGGAACTTTCAGGCATGCACTGAAATGGTTATGCCGATGTCTAGCAGCCGAAAGTTCAGCATGTTTCCACCATATGAGTATAATTACTCTTCTTTCCGAGAGGATTGCCTCAAGAATTTCGGAGTGAAGCCAAGGCCAAAACGGATTACTACAGTATTTGGAGGGCATAATATCCATCTCACGTTGAGGAAATTTGGAAGCAACATAATTTTCTCAAATGGCCTATTGGATCCATGGAGTGGTGGCAGTGTTTTGCAAAATATTTCAGAAAGTATTGTTTCTCTGGTGACTGAAGAAGGTGCACACCATATAGATTTACGTGCTTCAACAGTAAATGATCCTGATTGGTTGGTAGAGCAAAGGGCCACTGAGATCAAGCTAATACAAGGATGGATCAGTGACTATTACCAGAACTATAAAGTTGTGTTTGATATGTAA

Protein sequence

>Msa1385010

MATKIFATTLISTLIIIISSSHQAFALNHTPKFFGKFSSSTKPSQSQSQPQLDIHYETKFFQQRLDHFSFFKTSTFPQRYLINTENWVVGSGPIFLYCGNEGDIVWFAQNTGFVWEIAPKFGAMVVFPEHRYYGESVPFGSKEEAYKNSSTLGYLNAQQALFDFAVLVTDLKRNYSANASPVVLFGGSYGGSKTLFTLFLLIRVIVLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYDIVSNGFKRESSSCFNYIKQSWDDIESKGQTSDGLELLTKTFRFCQKLKSTEDLWNWLESAYSYLAMVNYPYPSEFLMPLPGHPIKEVCRRIDKGPAGTSILERIYEGVNVYYNYTGEAKCFELDDDPHGLSGWNFQACTEMVMPMSSSRKFSMFPPYEYNYSSFREDCLKNFGVKPRPKRITTVFGGHNIHLTLRKFGSNIIFSNGLLDPWSGGSVLQNISESIVSLVTEEGAHHIDLRASTVNDPDWLVEQRATEIKLIQGWISDYYQNYKVVFDM*