Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297840 | XP_024637044.1 | 95.801 | 381 | 15 | 1 | 1 | 380 | 1 | 381 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297840 | sp|O49725|PUP10_ARATH | 52.493 | 381 | 164 | 5 | 1 | 376 | 7 | 375 | 3.33e-126 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297840 | A0A396IJN7 | 95.801 | 381 | 15 | 1 | 1 | 380 | 1 | 381 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257000 | Msa1297840 | 0.957016 | 7.477666e-115 | -8.615850e-47 |
| Msa1205780 | Msa1297840 | 0.935241 | 1.155281e-96 | -8.615850e-47 |
| Msa1205820 | Msa1297840 | 0.965123 | 3.370614e-124 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297840 | MtrunA17_Chr4g0055041 | 95.801 | 381 | 15 | 1 | 1 | 380 | 1 | 381 | 0.0 | 721 |
| Msa1297840 | MtrunA17_Chr2g0283381 | 61.917 | 386 | 136 | 3 | 1 | 379 | 1 | 382 | 6.41e-166 | 469 |
| Msa1297840 | MtrunA17_Chr7g0249781 | 56.425 | 358 | 143 | 5 | 20 | 373 | 15 | 363 | 3.14e-136 | 393 |
| Msa1297840 | MtrunA17_Chr3g0102091 | 51.312 | 343 | 163 | 2 | 33 | 374 | 45 | 384 | 7.63e-120 | 352 |
| Msa1297840 | MtrunA17_Chr3g0132551 | 31.989 | 372 | 234 | 7 | 17 | 375 | 2 | 367 | 2.41e-58 | 194 |
| Msa1297840 | MtrunA17_Chr5g0426921 | 34.545 | 330 | 208 | 3 | 47 | 371 | 32 | 358 | 2.30e-57 | 191 |
| Msa1297840 | MtrunA17_Chr8g0346091 | 31.672 | 341 | 212 | 3 | 27 | 362 | 45 | 369 | 1.46e-53 | 181 |
| Msa1297840 | MtrunA17_Chr6g0483671 | 51.299 | 154 | 75 | 0 | 207 | 360 | 3 | 156 | 1.78e-53 | 174 |
| Msa1297840 | MtrunA17_Chr3g0132561 | 28.032 | 371 | 212 | 8 | 17 | 376 | 2 | 328 | 2.25e-45 | 159 |
| Msa1297840 | MtrunA17_Chr2g0296491 | 33.651 | 315 | 187 | 5 | 42 | 350 | 78 | 376 | 2.79e-45 | 160 |
| Msa1297840 | MtrunA17_Chr2g0296481 | 33.333 | 324 | 195 | 7 | 56 | 373 | 72 | 380 | 3.64e-40 | 146 |
| Msa1297840 | MtrunA17_Chr2g0313931 | 44.720 | 161 | 70 | 4 | 16 | 165 | 2 | 154 | 8.64e-33 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297840 | AT4G18210.1 | 52.493 | 381 | 164 | 5 | 1 | 376 | 7 | 375 | 3.38e-127 | 371 |
| Msa1297840 | AT4G18220.1 | 50.260 | 384 | 178 | 4 | 1 | 378 | 7 | 383 | 7.96e-124 | 363 |
| Msa1297840 | AT1G44750.1 | 51.705 | 352 | 159 | 2 | 27 | 378 | 36 | 376 | 2.25e-121 | 356 |
| Msa1297840 | AT1G44750.6 | 51.705 | 352 | 159 | 2 | 27 | 378 | 24 | 364 | 2.97e-121 | 355 |
| Msa1297840 | AT1G44750.2 | 51.705 | 352 | 159 | 2 | 27 | 378 | 24 | 364 | 2.97e-121 | 355 |
| Msa1297840 | AT4G18195.1 | 48.813 | 379 | 178 | 4 | 8 | 379 | 22 | 391 | 5.30e-108 | 322 |
| Msa1297840 | AT4G18205.1 | 48.295 | 352 | 175 | 2 | 17 | 367 | 22 | 367 | 1.22e-106 | 318 |
| Msa1297840 | AT4G18190.1 | 48.634 | 366 | 176 | 3 | 5 | 366 | 9 | 366 | 1.44e-106 | 318 |
| Msa1297840 | AT4G08700.1 | 46.910 | 356 | 175 | 4 | 18 | 371 | 18 | 361 | 7.54e-104 | 311 |
| Msa1297840 | AT4G18197.1 | 47.175 | 354 | 177 | 3 | 15 | 367 | 26 | 370 | 2.01e-103 | 311 |
| Msa1297840 | AT1G44750.7 | 56.767 | 266 | 112 | 1 | 113 | 378 | 38 | 300 | 2.79e-103 | 307 |
| Msa1297840 | AT1G44750.5 | 56.767 | 266 | 112 | 1 | 113 | 378 | 38 | 300 | 2.79e-103 | 307 |
| Msa1297840 | AT1G44750.4 | 56.767 | 266 | 112 | 1 | 113 | 378 | 38 | 300 | 2.79e-103 | 307 |
| Msa1297840 | AT1G44750.8 | 56.767 | 266 | 112 | 1 | 113 | 378 | 38 | 300 | 2.79e-103 | 307 |
| Msa1297840 | AT1G44750.3 | 56.767 | 266 | 112 | 1 | 113 | 378 | 38 | 300 | 2.79e-103 | 307 |
| Msa1297840 | AT5G41160.1 | 46.089 | 358 | 182 | 4 | 16 | 371 | 16 | 364 | 9.58e-99 | 298 |
| Msa1297840 | AT2G33750.2 | 37.126 | 334 | 201 | 2 | 42 | 372 | 13 | 340 | 1.14e-72 | 230 |
| Msa1297840 | AT2G33750.1 | 35.942 | 345 | 201 | 3 | 42 | 372 | 13 | 351 | 3.58e-69 | 222 |
| Msa1297840 | AT1G28220.1 | 34.462 | 325 | 202 | 5 | 42 | 361 | 11 | 329 | 3.39e-68 | 219 |
| Msa1297840 | AT1G28230.1 | 38.700 | 323 | 186 | 5 | 47 | 361 | 16 | 334 | 8.66e-65 | 210 |
| Msa1297840 | AT1G57990.1 | 31.510 | 384 | 226 | 9 | 6 | 361 | 2 | 376 | 3.18e-47 | 166 |
| Msa1297840 | AT1G57980.1 | 32.898 | 383 | 211 | 10 | 13 | 361 | 10 | 380 | 4.66e-47 | 165 |
| Msa1297840 | AT1G57943.1 | 31.220 | 410 | 225 | 12 | 6 | 376 | 2 | 393 | 5.24e-46 | 162 |
| Msa1297840 | AT1G57943.2 | 31.266 | 403 | 223 | 12 | 10 | 376 | 8 | 392 | 1.49e-45 | 161 |
| Msa1297840 | AT1G30840.2 | 32.945 | 343 | 205 | 7 | 17 | 353 | 13 | 336 | 2.32e-38 | 142 |
| Msa1297840 | AT1G30840.1 | 32.945 | 343 | 205 | 7 | 17 | 353 | 13 | 336 | 2.32e-38 | 142 |
| Msa1297840 | AT1G09860.1 | 31.139 | 395 | 227 | 12 | 1 | 368 | 1 | 377 | 7.42e-38 | 140 |
| Msa1297840 | AT1G47603.1 | 30.526 | 380 | 223 | 10 | 6 | 363 | 23 | 383 | 7.43e-37 | 138 |
| Msa1297840 | AT2G24220.2 | 29.223 | 373 | 224 | 4 | 1 | 348 | 1 | 358 | 2.13e-36 | 136 |
| Msa1297840 | AT2G24220.1 | 30.240 | 334 | 214 | 2 | 19 | 348 | 22 | 340 | 7.76e-36 | 134 |
| Msa1297840 | AT1G19770.1 | 30.792 | 341 | 204 | 7 | 47 | 362 | 59 | 392 | 9.64e-35 | 132 |
| Msa1297840 | AT1G75470.1 | 31.839 | 223 | 139 | 4 | 143 | 353 | 151 | 372 | 5.44e-23 | 99.8 |
Find 80 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACAATGATGGAAAATTT+TGG | 0.212423 | 8_3:-58422568 | None:intergenic |
| GATATTTATGTTGGTAGATT+TGG | 0.246168 | 8_3:-58422518 | None:intergenic |
| CCAAGTACTCGCTTATCTTT+AGG | 0.253149 | 8_3:-58422835 | None:intergenic |
| TAGCCTTGATGTTAGCAATA+TGG | 0.260377 | 8_3:+58423262 | Msa1297840:CDS |
| GTATCTTCCATTGGTATGTT+AGG | 0.270589 | 8_3:+58423123 | Msa1297840:CDS |
| CATATATAATGACTTTGTTT+TGG | 0.282504 | 8_3:+58423082 | Msa1297840:CDS |
| ATAAAGGTGGTAATAGTAAA+TGG | 0.292040 | 8_3:+58422425 | Msa1297840:CDS |
| TCAATCTACAGCCAATCTTT+TGG | 0.300726 | 8_3:+58422387 | Msa1297840:CDS |
| ATATGAATGCTGTGAACTTT+TGG | 0.301822 | 8_3:-58422735 | None:intergenic |
| TGTAAAAGCTATGATATAAT+AGG | 0.307794 | 8_3:-58421420 | None:intergenic |
| ATATAATAGGATACGGAATT+AGG | 0.315276 | 8_3:-58421407 | None:intergenic |
| GGAAGACTATATTATGATAA+AGG | 0.336418 | 8_3:+58422409 | Msa1297840:CDS |
| TCTCTACATAGTATTTCTTT+TGG | 0.340663 | 8_3:+58422360 | Msa1297840:CDS |
| GCTACTTGTGCTTGTGTTGT+TGG | 0.342888 | 8_3:+58422991 | Msa1297840:CDS |
| AGCCTTGATGTTAGCAATAT+GGG | 0.344380 | 8_3:+58423263 | Msa1297840:CDS |
| TTCTCTAATGGAGATAGTTC+AGG | 0.361251 | 8_3:+58421445 | Msa1297840:exon |
| GGAGATGAAGGAATATGAAC+TGG | 0.366582 | 8_3:+58423050 | Msa1297840:CDS |
| CTCATCTTCATGAGGTTTCA+AGG | 0.373710 | 8_3:+58423346 | Msa1297840:CDS |
| AAATAGAGTGGAAGTAGTAT+AGG | 0.379492 | 8_3:-58422478 | None:intergenic |
| GCAACATTTGTTCAATCAGC+TGG | 0.388372 | 8_3:+58422451 | Msa1297840:CDS |
| TTCTTCCATGACAAAATCAA+TGG | 0.388872 | 8_3:+58423228 | Msa1297840:CDS |
| CTACTTGTGCTTGTGTTGTT+GGG | 0.389251 | 8_3:+58422992 | Msa1297840:CDS |
| CCTAAAGATAAGCGAGTACT+TGG | 0.390852 | 8_3:+58422835 | Msa1297840:CDS |
| AATAGAGTGGAAGTAGTATA+GGG | 0.393496 | 8_3:-58422477 | None:intergenic |
| AGAATGGAAAAGTTTGAATA+AGG | 0.399319 | 8_3:+58423029 | Msa1297840:CDS |
| ATCATCAGAATCGTTATTGA+TGG | 0.404902 | 8_3:-58422800 | None:intergenic |
| GCACAAGTAGCGACGAAAGA+AGG | 0.407661 | 8_3:-58422979 | None:intergenic |
| ATCAATATTGATATTTATGT+TGG | 0.410871 | 8_3:-58422527 | None:intergenic |
| TAGATAATGTTGATAAATAT+AGG | 0.416324 | 8_3:-58423295 | None:intergenic |
| GTAAGAAAATACTGCATTGA+AGG | 0.434994 | 8_3:-58422701 | None:intergenic |
| TATCTTCCATTGGTATGTTA+GGG | 0.435640 | 8_3:+58423124 | Msa1297840:CDS |
| TCTTCCATGACAAAATCAAT+GGG | 0.440740 | 8_3:+58423229 | Msa1297840:CDS |
| CTTGGATTCGTCTTCACCCT+TGG | 0.444186 | 8_3:+58422853 | Msa1297840:CDS |
| GGTTGTTTGCAAGTGGAGAA+TGG | 0.463564 | 8_3:+58423013 | Msa1297840:CDS |
| AAAGATTAAGAGATTTCAAA+TGG | 0.470365 | 8_3:+58422323 | Msa1297840:CDS |
| TCTCTTAATCTTTGATGTTG+AGG | 0.470898 | 8_3:-58422313 | None:intergenic |
| ATATAGTCTTCCCAAAAGAT+TGG | 0.476719 | 8_3:-58422398 | None:intergenic |
| GAAGAAAATAACAGCAAGGA+TGG | 0.477070 | 8_3:-58423211 | None:intergenic |
| CAGTAGTTGTAGTTGATTGT+GGG | 0.484203 | 8_3:-58421475 | None:intergenic |
| TCATGAGGTTTCAAGGGGTG+AGG | 0.500851 | 8_3:+58423353 | Msa1297840:CDS |
| TGTTGCACATAGTAAAGAAT+AGG | 0.504800 | 8_3:-58422671 | None:intergenic |
| ATCGTTATTGATGGCAAGTA+GGG | 0.507986 | 8_3:-58422791 | None:intergenic |
| AAGTTTGAATAAGGAGATGA+AGG | 0.509849 | 8_3:+58423038 | Msa1297840:CDS |
| TGAAAGATATAGAAGTCCAT+TGG | 0.520330 | 8_3:-58422641 | None:intergenic |
| AAACTGCATGTCCAAGATAA+CGG | 0.522371 | 8_3:-58422953 | None:intergenic |
| TCATCTTCATGAGGTTTCAA+GGG | 0.524727 | 8_3:+58423347 | Msa1297840:CDS |
| GCAGTAGTTGTAGTTGATTG+TGG | 0.527047 | 8_3:-58421476 | None:intergenic |
| ACAGCAAGGATGGGACCTAC+AGG | 0.527733 | 8_3:-58423201 | None:intergenic |
| CATGTCCAAGATAACGGAAA+AGG | 0.529515 | 8_3:-58422947 | None:intergenic |
| AGCTATGATATAATAGGATA+CGG | 0.531860 | 8_3:-58421414 | None:intergenic |
| CACAAGTAGCGACGAAAGAA+GGG | 0.536717 | 8_3:-58422978 | None:intergenic |
| GACAATTTGATGTATTCCAA+TGG | 0.539300 | 8_3:+58422625 | Msa1297840:CDS |
| AATCGTTATTGATGGCAAGT+AGG | 0.540072 | 8_3:-58422792 | None:intergenic |
| TATGTAAAGAGAAACAATGA+TGG | 0.542651 | 8_3:-58422578 | None:intergenic |
| GTTGTTGGGTTGTTTGCAAG+TGG | 0.551141 | 8_3:+58423006 | Msa1297840:CDS |
| TCCCCATATTGCTAACATCA+AGG | 0.553521 | 8_3:-58423265 | None:intergenic |
| CAATCAACTACAACTACTGC+AGG | 0.567854 | 8_3:+58421479 | Msa1297840:CDS |
| AGGTGGTAATAGTAAATGGA+TGG | 0.571564 | 8_3:+58422429 | Msa1297840:CDS |
| AACTAACCCTAACATACCAA+TGG | 0.573549 | 8_3:-58423130 | None:intergenic |
| ACATGGCAAGTATCTTCCAT+TGG | 0.573996 | 8_3:+58423114 | Msa1297840:CDS |
| TGTCAAAAGAAAGCTGCACA+AGG | 0.574825 | 8_3:-58422906 | None:intergenic |
| ATGTTGGTAGATTTGGCATG+TGG | 0.579676 | 8_3:-58422511 | None:intergenic |
| GATTAAGAGATTTCAAATGG+TGG | 0.581181 | 8_3:+58422326 | Msa1297840:CDS |
| GAAGGAATATGAACTGGGAA+AGG | 0.585101 | 8_3:+58423056 | Msa1297840:CDS |
| GTGAGGTTGAAATTTGCTGA+TGG | 0.585220 | 8_3:+58423370 | Msa1297840:CDS |
| TGCACATAGTAAAGAATAGG+TGG | 0.594060 | 8_3:-58422668 | None:intergenic |
| AGACTATATTATGATAAAGG+TGG | 0.598402 | 8_3:+58422412 | Msa1297840:CDS |
| GAGATGAAGGAATATGAACT+GGG | 0.604093 | 8_3:+58423051 | Msa1297840:CDS |
| AAATGTAATAGATGCACCAA+GGG | 0.606332 | 8_3:-58422869 | None:intergenic |
| GCCTTGATGTTAGCAATATG+GGG | 0.607447 | 8_3:+58423264 | Msa1297840:CDS |
| AAGAAAATAACAGCAAGGAT+GGG | 0.616093 | 8_3:-58423210 | None:intergenic |
| CATCTTCATGAGGTTTCAAG+GGG | 0.629974 | 8_3:+58423348 | Msa1297840:CDS |
| CATGGAAGAAAATAACAGCA+AGG | 0.631020 | 8_3:-58423215 | None:intergenic |
| AATACAGTGGTACTTCCTGT+AGG | 0.636862 | 8_3:+58423186 | Msa1297840:CDS |
| GAATAAAACTCATCTTCATG+AGG | 0.640768 | 8_3:+58423338 | Msa1297840:CDS |
| CTCAAATGTAATAAATACAG+TGG | 0.647972 | 8_3:+58423173 | Msa1297840:CDS |
| AAAATGTAATAGATGCACCA+AGG | 0.652741 | 8_3:-58422870 | None:intergenic |
| CTTCCATGACAAAATCAATG+GGG | 0.656091 | 8_3:+58423230 | Msa1297840:CDS |
| GGTGTGAAGATAAAATAGAG+TGG | 0.659598 | 8_3:-58422490 | None:intergenic |
| GTCAAAAGAAAGCTGCACAA+GGG | 0.669271 | 8_3:-58422905 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTAAAAAAATATAG+AGG | - | chr8_3:58421776-58421795 | None:intergenic | 10.0% |
| !!! | TTTTAGTTAAAAAAATATAG+AGG | - | chr8_3:58421776-58421795 | None:intergenic | 10.0% |
| !! | ATCAATATTGATATTTATGT+TGG | - | chr8_3:58422530-58422549 | None:intergenic | 15.0% |
| !!! | TAGATAATGTTGATAAATAT+AGG | - | chr8_3:58423298-58423317 | None:intergenic | 15.0% |
| !! | ATCAATATTGATATTTATGT+TGG | - | chr8_3:58422530-58422549 | None:intergenic | 15.0% |
| !!! | TAGATAATGTTGATAAATAT+AGG | - | chr8_3:58423298-58423317 | None:intergenic | 15.0% |
| !! | TGTAAAAGCTATGATATAAT+AGG | - | chr8_3:58421423-58421442 | None:intergenic | 20.0% |
| !! | ATCTTGATTGTAGTATTTAA+AGG | + | chr8_3:58421672-58421691 | Msa1297840:intron | 20.0% |
| !!! | ATTTTAGACCAAATATTTGT+TGG | + | chr8_3:58421891-58421910 | Msa1297840:intron | 20.0% |
| !! | TTGTAAAATGATGAAAATAG+AGG | + | chr8_3:58421955-58421974 | Msa1297840:intron | 20.0% |
| !!! | ATAATTTTCAATAGTTAGGA+AGG | - | chr8_3:58422061-58422080 | None:intergenic | 20.0% |
| !! | TCCTAACTATTGAAAATTAT+TGG | + | chr8_3:58422061-58422080 | Msa1297840:intron | 20.0% |
| !! | GAAATTCATAACAAGAAATT+GGG | - | chr8_3:58422272-58422291 | None:intergenic | 20.0% |
| !! | AGAAATTCATAACAAGAAAT+TGG | - | chr8_3:58422273-58422292 | None:intergenic | 20.0% |
| !! | AAAGATTAAGAGATTTCAAA+TGG | + | chr8_3:58422323-58422342 | Msa1297840:CDS | 20.0% |
| !!! | AAATTTTGGTTTGGTTTTTT+TGG | - | chr8_3:58422557-58422576 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTTACATATTTTT+TGG | + | chr8_3:58422586-58422605 | Msa1297840:CDS | 20.0% |
| !!! | CATATATAATGACTTTGTTT+TGG | + | chr8_3:58423082-58423101 | Msa1297840:CDS | 20.0% |
| !! | TGTAAAAGCTATGATATAAT+AGG | - | chr8_3:58421423-58421442 | None:intergenic | 20.0% |
| !! | ATCTTGATTGTAGTATTTAA+AGG | + | chr8_3:58421672-58421691 | Msa1297840:intron | 20.0% |
| !!! | ATTTTAGACCAAATATTTGT+TGG | + | chr8_3:58421891-58421910 | Msa1297840:intron | 20.0% |
| !! | TTGTAAAATGATGAAAATAG+AGG | + | chr8_3:58421955-58421974 | Msa1297840:intron | 20.0% |
| !!! | ATAATTTTCAATAGTTAGGA+AGG | - | chr8_3:58422061-58422080 | None:intergenic | 20.0% |
| !! | TCCTAACTATTGAAAATTAT+TGG | + | chr8_3:58422061-58422080 | Msa1297840:intron | 20.0% |
| !! | GAAATTCATAACAAGAAATT+GGG | - | chr8_3:58422272-58422291 | None:intergenic | 20.0% |
| !! | AGAAATTCATAACAAGAAAT+TGG | - | chr8_3:58422273-58422292 | None:intergenic | 20.0% |
| !! | AAAGATTAAGAGATTTCAAA+TGG | + | chr8_3:58422323-58422342 | Msa1297840:CDS | 20.0% |
| !!! | AAATTTTGGTTTGGTTTTTT+TGG | - | chr8_3:58422557-58422576 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTTACATATTTTT+TGG | + | chr8_3:58422586-58422605 | Msa1297840:CDS | 20.0% |
| !!! | CATATATAATGACTTTGTTT+TGG | + | chr8_3:58423082-58423101 | Msa1297840:CDS | 20.0% |
| ! | ATATAATAGGATACGGAATT+AGG | - | chr8_3:58421410-58421429 | None:intergenic | 25.0% |
| ! | AGCTATGATATAATAGGATA+CGG | - | chr8_3:58421417-58421436 | None:intergenic | 25.0% |
| ! | TCCATAAAATGGTGAAAATA+GGG | - | chr8_3:58421717-58421736 | None:intergenic | 25.0% |
| ! | ATCCATAAAATGGTGAAAAT+AGG | - | chr8_3:58421718-58421737 | None:intergenic | 25.0% |
| !!! | CATTGACATGTGATTTTTTT+TGG | - | chr8_3:58422010-58422029 | None:intergenic | 25.0% |
| ! | CAAAAAAAATCACATGTCAA+TGG | + | chr8_3:58422008-58422027 | Msa1297840:intron | 25.0% |
| !! | AATACATCAAAACTTGCTTT+AGG | + | chr8_3:58422035-58422054 | Msa1297840:intron | 25.0% |
| !! | GCCAATAATTTTCAATAGTT+AGG | - | chr8_3:58422065-58422084 | None:intergenic | 25.0% |
| !! | TCTCTACATAGTATTTCTTT+TGG | + | chr8_3:58422360-58422379 | Msa1297840:CDS | 25.0% |
| !! | TACATAGTATTTCTTTTGGT+AGG | + | chr8_3:58422364-58422383 | Msa1297840:CDS | 25.0% |
| ! | GGAAGACTATATTATGATAA+AGG | + | chr8_3:58422409-58422428 | Msa1297840:CDS | 25.0% |
| ! | AGACTATATTATGATAAAGG+TGG | + | chr8_3:58422412-58422431 | Msa1297840:CDS | 25.0% |
| ! | ATAAAGGTGGTAATAGTAAA+TGG | + | chr8_3:58422425-58422444 | Msa1297840:CDS | 25.0% |
| !! | GATATTTATGTTGGTAGATT+TGG | - | chr8_3:58422521-58422540 | None:intergenic | 25.0% |
| !!! | AATGATGGAAAATTTTGGTT+TGG | - | chr8_3:58422566-58422585 | None:intergenic | 25.0% |
| !!! | GAAACAATGATGGAAAATTT+TGG | - | chr8_3:58422571-58422590 | None:intergenic | 25.0% |
| ! | TATGTAAAGAGAAACAATGA+TGG | - | chr8_3:58422581-58422600 | None:intergenic | 25.0% |
| ! | AGAATGGAAAAGTTTGAATA+AGG | + | chr8_3:58423029-58423048 | Msa1297840:CDS | 25.0% |
| ! | CTCAAATGTAATAAATACAG+TGG | + | chr8_3:58423173-58423192 | Msa1297840:CDS | 25.0% |
| ! | ATATAATAGGATACGGAATT+AGG | - | chr8_3:58421410-58421429 | None:intergenic | 25.0% |
| ! | AGCTATGATATAATAGGATA+CGG | - | chr8_3:58421417-58421436 | None:intergenic | 25.0% |
| ! | TCCATAAAATGGTGAAAATA+GGG | - | chr8_3:58421717-58421736 | None:intergenic | 25.0% |
| ! | ATCCATAAAATGGTGAAAAT+AGG | - | chr8_3:58421718-58421737 | None:intergenic | 25.0% |
| !!! | CATTGACATGTGATTTTTTT+TGG | - | chr8_3:58422010-58422029 | None:intergenic | 25.0% |
| ! | CAAAAAAAATCACATGTCAA+TGG | + | chr8_3:58422008-58422027 | Msa1297840:intron | 25.0% |
| !! | AATACATCAAAACTTGCTTT+AGG | + | chr8_3:58422035-58422054 | Msa1297840:intron | 25.0% |
| !! | GCCAATAATTTTCAATAGTT+AGG | - | chr8_3:58422065-58422084 | None:intergenic | 25.0% |
| !! | TCTCTACATAGTATTTCTTT+TGG | + | chr8_3:58422360-58422379 | Msa1297840:CDS | 25.0% |
| !! | TACATAGTATTTCTTTTGGT+AGG | + | chr8_3:58422364-58422383 | Msa1297840:CDS | 25.0% |
| ! | GGAAGACTATATTATGATAA+AGG | + | chr8_3:58422409-58422428 | Msa1297840:CDS | 25.0% |
| ! | AGACTATATTATGATAAAGG+TGG | + | chr8_3:58422412-58422431 | Msa1297840:CDS | 25.0% |
| ! | ATAAAGGTGGTAATAGTAAA+TGG | + | chr8_3:58422425-58422444 | Msa1297840:CDS | 25.0% |
| !! | GATATTTATGTTGGTAGATT+TGG | - | chr8_3:58422521-58422540 | None:intergenic | 25.0% |
| !!! | AATGATGGAAAATTTTGGTT+TGG | - | chr8_3:58422566-58422585 | None:intergenic | 25.0% |
| !!! | GAAACAATGATGGAAAATTT+TGG | - | chr8_3:58422571-58422590 | None:intergenic | 25.0% |
| ! | TATGTAAAGAGAAACAATGA+TGG | - | chr8_3:58422581-58422600 | None:intergenic | 25.0% |
| ! | AGAATGGAAAAGTTTGAATA+AGG | + | chr8_3:58423029-58423048 | Msa1297840:CDS | 25.0% |
| ! | CTCAAATGTAATAAATACAG+TGG | + | chr8_3:58423173-58423192 | Msa1297840:CDS | 25.0% |
| ! | AGCTTTTACACTTTCTCTAA+TGG | + | chr8_3:58421433-58421452 | Msa1297840:exon | 30.0% |
| ! | TCCCTATTTTCACCATTTTA+TGG | + | chr8_3:58421713-58421732 | Msa1297840:intron | 30.0% |
| ! | TTAGACCAAATATTTGTTGG+AGG | + | chr8_3:58421894-58421913 | Msa1297840:intron | 30.0% |
| ! | TAGACCAAATATTTGTTGGA+GGG | + | chr8_3:58421895-58421914 | Msa1297840:intron | 30.0% |
| !!! | ACCGTCACATTTTAAAATAG+AGG | + | chr8_3:58421924-58421943 | Msa1297840:intron | 30.0% |
| !!! | CCCTCTATTTTAAAATGTGA+CGG | - | chr8_3:58421928-58421947 | None:intergenic | 30.0% |
| !!! | CCGTCACATTTTAAAATAGA+GGG | + | chr8_3:58421925-58421944 | Msa1297840:intron | 30.0% |
| !!! | CGTCACATTTTAAAATAGAG+GGG | + | chr8_3:58421926-58421945 | Msa1297840:intron | 30.0% |
| TCAGTAGTGAAAGATTAACA+TGG | - | chr8_3:58422087-58422106 | None:intergenic | 30.0% | |
| ! | TCTTGTTATGAATTTCTCAG+AGG | + | chr8_3:58422276-58422295 | Msa1297840:intron | 30.0% |
| TCTCTTAATCTTTGATGTTG+AGG | - | chr8_3:58422316-58422335 | None:intergenic | 30.0% | |
| GATTAAGAGATTTCAAATGG+TGG | + | chr8_3:58422326-58422345 | Msa1297840:CDS | 30.0% | |
| ATATAGTCTTCCCAAAAGAT+TGG | - | chr8_3:58422401-58422420 | None:intergenic | 30.0% | |
| AATAGAGTGGAAGTAGTATA+GGG | - | chr8_3:58422480-58422499 | None:intergenic | 30.0% | |
| AAATAGAGTGGAAGTAGTAT+AGG | - | chr8_3:58422481-58422500 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTGGTTTTTTTGG+AGG | - | chr8_3:58422554-58422573 | None:intergenic | 30.0% |
| !!! | TTTTTTGGCTTACTTTTAGC+AGG | + | chr8_3:58422601-58422620 | Msa1297840:CDS | 30.0% |
| !!! | TTTTTGGCTTACTTTTAGCA+GGG | + | chr8_3:58422602-58422621 | Msa1297840:CDS | 30.0% |
| GACAATTTGATGTATTCCAA+TGG | + | chr8_3:58422625-58422644 | Msa1297840:CDS | 30.0% | |
| TGAAAGATATAGAAGTCCAT+TGG | - | chr8_3:58422644-58422663 | None:intergenic | 30.0% | |
| TGTTGCACATAGTAAAGAAT+AGG | - | chr8_3:58422674-58422693 | None:intergenic | 30.0% | |
| GTAAGAAAATACTGCATTGA+AGG | - | chr8_3:58422704-58422723 | None:intergenic | 30.0% | |
| ! | TATGAATGCTGTGAACTTTT+GGG | - | chr8_3:58422737-58422756 | None:intergenic | 30.0% |
| ! | ATATGAATGCTGTGAACTTT+TGG | - | chr8_3:58422738-58422757 | None:intergenic | 30.0% |
| ATCATCAGAATCGTTATTGA+TGG | - | chr8_3:58422803-58422822 | None:intergenic | 30.0% | |
| AAATGTAATAGATGCACCAA+GGG | - | chr8_3:58422872-58422891 | None:intergenic | 30.0% | |
| AAAATGTAATAGATGCACCA+AGG | - | chr8_3:58422873-58422892 | None:intergenic | 30.0% | |
| AAGTTTGAATAAGGAGATGA+AGG | + | chr8_3:58423038-58423057 | Msa1297840:CDS | 30.0% | |
| TATCTTCCATTGGTATGTTA+GGG | + | chr8_3:58423124-58423143 | Msa1297840:CDS | 30.0% | |
| AAGAAAATAACAGCAAGGAT+GGG | - | chr8_3:58423213-58423232 | None:intergenic | 30.0% | |
| TTCTTCCATGACAAAATCAA+TGG | + | chr8_3:58423228-58423247 | Msa1297840:CDS | 30.0% | |
| TCTTCCATGACAAAATCAAT+GGG | + | chr8_3:58423229-58423248 | Msa1297840:CDS | 30.0% | |
| GAATAAAACTCATCTTCATG+AGG | + | chr8_3:58423338-58423357 | Msa1297840:CDS | 30.0% | |
| ! | AGCTTTTACACTTTCTCTAA+TGG | + | chr8_3:58421433-58421452 | Msa1297840:exon | 30.0% |
| ! | TCCCTATTTTCACCATTTTA+TGG | + | chr8_3:58421713-58421732 | Msa1297840:intron | 30.0% |
| ! | TTAGACCAAATATTTGTTGG+AGG | + | chr8_3:58421894-58421913 | Msa1297840:intron | 30.0% |
| ! | TAGACCAAATATTTGTTGGA+GGG | + | chr8_3:58421895-58421914 | Msa1297840:intron | 30.0% |
| !!! | ACCGTCACATTTTAAAATAG+AGG | + | chr8_3:58421924-58421943 | Msa1297840:intron | 30.0% |
| !!! | CCCTCTATTTTAAAATGTGA+CGG | - | chr8_3:58421928-58421947 | None:intergenic | 30.0% |
| !!! | CCGTCACATTTTAAAATAGA+GGG | + | chr8_3:58421925-58421944 | Msa1297840:intron | 30.0% |
| !!! | CGTCACATTTTAAAATAGAG+GGG | + | chr8_3:58421926-58421945 | Msa1297840:intron | 30.0% |
| TCAGTAGTGAAAGATTAACA+TGG | - | chr8_3:58422087-58422106 | None:intergenic | 30.0% | |
| ! | TCTTGTTATGAATTTCTCAG+AGG | + | chr8_3:58422276-58422295 | Msa1297840:intron | 30.0% |
| TCTCTTAATCTTTGATGTTG+AGG | - | chr8_3:58422316-58422335 | None:intergenic | 30.0% | |
| GATTAAGAGATTTCAAATGG+TGG | + | chr8_3:58422326-58422345 | Msa1297840:CDS | 30.0% | |
| ATATAGTCTTCCCAAAAGAT+TGG | - | chr8_3:58422401-58422420 | None:intergenic | 30.0% | |
| AATAGAGTGGAAGTAGTATA+GGG | - | chr8_3:58422480-58422499 | None:intergenic | 30.0% | |
| AAATAGAGTGGAAGTAGTAT+AGG | - | chr8_3:58422481-58422500 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTGGTTTTTTTGG+AGG | - | chr8_3:58422554-58422573 | None:intergenic | 30.0% |
| !!! | TTTTTTGGCTTACTTTTAGC+AGG | + | chr8_3:58422601-58422620 | Msa1297840:CDS | 30.0% |
| !!! | TTTTTGGCTTACTTTTAGCA+GGG | + | chr8_3:58422602-58422621 | Msa1297840:CDS | 30.0% |
| GACAATTTGATGTATTCCAA+TGG | + | chr8_3:58422625-58422644 | Msa1297840:CDS | 30.0% | |
| TGAAAGATATAGAAGTCCAT+TGG | - | chr8_3:58422644-58422663 | None:intergenic | 30.0% | |
| TGTTGCACATAGTAAAGAAT+AGG | - | chr8_3:58422674-58422693 | None:intergenic | 30.0% | |
| GTAAGAAAATACTGCATTGA+AGG | - | chr8_3:58422704-58422723 | None:intergenic | 30.0% | |
| ! | TATGAATGCTGTGAACTTTT+GGG | - | chr8_3:58422737-58422756 | None:intergenic | 30.0% |
| ! | ATATGAATGCTGTGAACTTT+TGG | - | chr8_3:58422738-58422757 | None:intergenic | 30.0% |
| ATCATCAGAATCGTTATTGA+TGG | - | chr8_3:58422803-58422822 | None:intergenic | 30.0% | |
| AAATGTAATAGATGCACCAA+GGG | - | chr8_3:58422872-58422891 | None:intergenic | 30.0% | |
| AAAATGTAATAGATGCACCA+AGG | - | chr8_3:58422873-58422892 | None:intergenic | 30.0% | |
| AAGTTTGAATAAGGAGATGA+AGG | + | chr8_3:58423038-58423057 | Msa1297840:CDS | 30.0% | |
| TATCTTCCATTGGTATGTTA+GGG | + | chr8_3:58423124-58423143 | Msa1297840:CDS | 30.0% | |
| AAGAAAATAACAGCAAGGAT+GGG | - | chr8_3:58423213-58423232 | None:intergenic | 30.0% | |
| TTCTTCCATGACAAAATCAA+TGG | + | chr8_3:58423228-58423247 | Msa1297840:CDS | 30.0% | |
| TCTTCCATGACAAAATCAAT+GGG | + | chr8_3:58423229-58423248 | Msa1297840:CDS | 30.0% | |
| GAATAAAACTCATCTTCATG+AGG | + | chr8_3:58423338-58423357 | Msa1297840:CDS | 30.0% | |
| TTCTCTAATGGAGATAGTTC+AGG | + | chr8_3:58421445-58421464 | Msa1297840:exon | 35.0% | |
| CAGTAGTTGTAGTTGATTGT+GGG | - | chr8_3:58421478-58421497 | None:intergenic | 35.0% | |
| ! | TCATGTCTCTCAAAGTTGAT+AGG | + | chr8_3:58421639-58421658 | Msa1297840:intron | 35.0% |
| ! | TAAAGGCTCAATTGCAGTTT+TGG | + | chr8_3:58421689-58421708 | Msa1297840:intron | 35.0% |
| GGGGAACTAAATCCATAAAA+TGG | - | chr8_3:58421728-58421747 | None:intergenic | 35.0% | |
| TCCTGTCGCGTTATAAAATA+GGG | - | chr8_3:58421748-58421767 | None:intergenic | 35.0% | |
| ATCCTGTCGCGTTATAAAAT+AGG | - | chr8_3:58421749-58421768 | None:intergenic | 35.0% | |
| ! | ATTTTATAACGCGACAGGAT+TGG | + | chr8_3:58421749-58421768 | Msa1297840:intron | 35.0% |
| TGATCCCTCCAACAAATATT+TGG | - | chr8_3:58421902-58421921 | None:intergenic | 35.0% | |
| ! | ACACAAAGTTGGGTCAATTT+TGG | - | chr8_3:58422152-58422171 | None:intergenic | 35.0% |
| AACGATGAACACACAAAGTT+GGG | - | chr8_3:58422162-58422181 | None:intergenic | 35.0% | |
| AAACGATGAACACACAAAGT+TGG | - | chr8_3:58422163-58422182 | None:intergenic | 35.0% | |
| TAGAACAATGAACACCAGTA+CGG | - | chr8_3:58422216-58422235 | None:intergenic | 35.0% | |
| ! | TCAATCTACAGCCAATCTTT+TGG | + | chr8_3:58422387-58422406 | Msa1297840:CDS | 35.0% |
| ! | CAATCTACAGCCAATCTTTT+GGG | + | chr8_3:58422388-58422407 | Msa1297840:CDS | 35.0% |
| AGGTGGTAATAGTAAATGGA+TGG | + | chr8_3:58422429-58422448 | Msa1297840:CDS | 35.0% | |
| GGTGTGAAGATAAAATAGAG+TGG | - | chr8_3:58422493-58422512 | None:intergenic | 35.0% | |
| !!! | TTTTGGCTTACTTTTAGCAG+GGG | + | chr8_3:58422603-58422622 | Msa1297840:CDS | 35.0% |
| TGCACATAGTAAAGAATAGG+TGG | - | chr8_3:58422671-58422690 | None:intergenic | 35.0% | |
| !! | CTGTGAACTTTTGGGAATTA+AGG | - | chr8_3:58422729-58422748 | None:intergenic | 35.0% |
| ! | ATCGTTATTGATGGCAAGTA+GGG | - | chr8_3:58422794-58422813 | None:intergenic | 35.0% |
| ! | AATCGTTATTGATGGCAAGT+AGG | - | chr8_3:58422795-58422814 | None:intergenic | 35.0% |
| ! | TGAAACCTTTTCCGTTATCT+TGG | + | chr8_3:58422942-58422961 | Msa1297840:CDS | 35.0% |
| AAACTGCATGTCCAAGATAA+CGG | - | chr8_3:58422956-58422975 | None:intergenic | 35.0% | |
| GAGATGAAGGAATATGAACT+GGG | + | chr8_3:58423051-58423070 | Msa1297840:CDS | 35.0% | |
| GTATCTTCCATTGGTATGTT+AGG | + | chr8_3:58423123-58423142 | Msa1297840:CDS | 35.0% | |
| AACTAACCCTAACATACCAA+TGG | - | chr8_3:58423133-58423152 | None:intergenic | 35.0% | |
| GAAGAAAATAACAGCAAGGA+TGG | - | chr8_3:58423214-58423233 | None:intergenic | 35.0% | |
| CATGGAAGAAAATAACAGCA+AGG | - | chr8_3:58423218-58423237 | None:intergenic | 35.0% | |
| CTTCCATGACAAAATCAATG+GGG | + | chr8_3:58423230-58423249 | Msa1297840:CDS | 35.0% | |
| ! | TAGCCTTGATGTTAGCAATA+TGG | + | chr8_3:58423262-58423281 | Msa1297840:CDS | 35.0% |
| AGCCTTGATGTTAGCAATAT+GGG | + | chr8_3:58423263-58423282 | Msa1297840:CDS | 35.0% | |
| TCTAGATGACAAAAAAGCCA+AGG | + | chr8_3:58423314-58423333 | Msa1297840:CDS | 35.0% | |
| !!! | AAGATGAGTTTTATTCGCCT+TGG | - | chr8_3:58423334-58423353 | None:intergenic | 35.0% |
| TCATCTTCATGAGGTTTCAA+GGG | + | chr8_3:58423347-58423366 | Msa1297840:CDS | 35.0% | |
| TTCTCTAATGGAGATAGTTC+AGG | + | chr8_3:58421445-58421464 | Msa1297840:exon | 35.0% | |
| CAGTAGTTGTAGTTGATTGT+GGG | - | chr8_3:58421478-58421497 | None:intergenic | 35.0% | |
| ! | TCATGTCTCTCAAAGTTGAT+AGG | + | chr8_3:58421639-58421658 | Msa1297840:intron | 35.0% |
| ! | TAAAGGCTCAATTGCAGTTT+TGG | + | chr8_3:58421689-58421708 | Msa1297840:intron | 35.0% |
| GGGGAACTAAATCCATAAAA+TGG | - | chr8_3:58421728-58421747 | None:intergenic | 35.0% | |
| TCCTGTCGCGTTATAAAATA+GGG | - | chr8_3:58421748-58421767 | None:intergenic | 35.0% | |
| ATCCTGTCGCGTTATAAAAT+AGG | - | chr8_3:58421749-58421768 | None:intergenic | 35.0% | |
| ! | ATTTTATAACGCGACAGGAT+TGG | + | chr8_3:58421749-58421768 | Msa1297840:intron | 35.0% |
| TGATCCCTCCAACAAATATT+TGG | - | chr8_3:58421902-58421921 | None:intergenic | 35.0% | |
| ! | ACACAAAGTTGGGTCAATTT+TGG | - | chr8_3:58422152-58422171 | None:intergenic | 35.0% |
| AACGATGAACACACAAAGTT+GGG | - | chr8_3:58422162-58422181 | None:intergenic | 35.0% | |
| AAACGATGAACACACAAAGT+TGG | - | chr8_3:58422163-58422182 | None:intergenic | 35.0% | |
| TAGAACAATGAACACCAGTA+CGG | - | chr8_3:58422216-58422235 | None:intergenic | 35.0% | |
| ! | TCAATCTACAGCCAATCTTT+TGG | + | chr8_3:58422387-58422406 | Msa1297840:CDS | 35.0% |
| ! | CAATCTACAGCCAATCTTTT+GGG | + | chr8_3:58422388-58422407 | Msa1297840:CDS | 35.0% |
| AGGTGGTAATAGTAAATGGA+TGG | + | chr8_3:58422429-58422448 | Msa1297840:CDS | 35.0% | |
| GGTGTGAAGATAAAATAGAG+TGG | - | chr8_3:58422493-58422512 | None:intergenic | 35.0% | |
| !!! | TTTTGGCTTACTTTTAGCAG+GGG | + | chr8_3:58422603-58422622 | Msa1297840:CDS | 35.0% |
| TGCACATAGTAAAGAATAGG+TGG | - | chr8_3:58422671-58422690 | None:intergenic | 35.0% | |
| !! | CTGTGAACTTTTGGGAATTA+AGG | - | chr8_3:58422729-58422748 | None:intergenic | 35.0% |
| ! | ATCGTTATTGATGGCAAGTA+GGG | - | chr8_3:58422794-58422813 | None:intergenic | 35.0% |
| ! | AATCGTTATTGATGGCAAGT+AGG | - | chr8_3:58422795-58422814 | None:intergenic | 35.0% |
| ! | TGAAACCTTTTCCGTTATCT+TGG | + | chr8_3:58422942-58422961 | Msa1297840:CDS | 35.0% |
| AAACTGCATGTCCAAGATAA+CGG | - | chr8_3:58422956-58422975 | None:intergenic | 35.0% | |
| GAGATGAAGGAATATGAACT+GGG | + | chr8_3:58423051-58423070 | Msa1297840:CDS | 35.0% | |
| GTATCTTCCATTGGTATGTT+AGG | + | chr8_3:58423123-58423142 | Msa1297840:CDS | 35.0% | |
| AACTAACCCTAACATACCAA+TGG | - | chr8_3:58423133-58423152 | None:intergenic | 35.0% | |
| GAAGAAAATAACAGCAAGGA+TGG | - | chr8_3:58423214-58423233 | None:intergenic | 35.0% | |
| CATGGAAGAAAATAACAGCA+AGG | - | chr8_3:58423218-58423237 | None:intergenic | 35.0% | |
| CTTCCATGACAAAATCAATG+GGG | + | chr8_3:58423230-58423249 | Msa1297840:CDS | 35.0% | |
| ! | TAGCCTTGATGTTAGCAATA+TGG | + | chr8_3:58423262-58423281 | Msa1297840:CDS | 35.0% |
| AGCCTTGATGTTAGCAATAT+GGG | + | chr8_3:58423263-58423282 | Msa1297840:CDS | 35.0% | |
| TCTAGATGACAAAAAAGCCA+AGG | + | chr8_3:58423314-58423333 | Msa1297840:CDS | 35.0% | |
| !!! | AAGATGAGTTTTATTCGCCT+TGG | - | chr8_3:58423334-58423353 | None:intergenic | 35.0% |
| TCATCTTCATGAGGTTTCAA+GGG | + | chr8_3:58423347-58423366 | Msa1297840:CDS | 35.0% | |
| GCAGTAGTTGTAGTTGATTG+TGG | - | chr8_3:58421479-58421498 | None:intergenic | 40.0% | |
| CAATCAACTACAACTACTGC+AGG | + | chr8_3:58421479-58421498 | Msa1297840:CDS | 40.0% | |
| AACTACAACTACTGCAGGTT+AGG | + | chr8_3:58421484-58421503 | Msa1297840:intron | 40.0% | |
| CCTGTCGCGTTATAAAATAG+GGG | - | chr8_3:58421747-58421766 | None:intergenic | 40.0% | |
| GCAACATTTGTTCAATCAGC+TGG | + | chr8_3:58422451-58422470 | Msa1297840:CDS | 40.0% | |
| ! | ATGTTGGTAGATTTGGCATG+TGG | - | chr8_3:58422514-58422533 | None:intergenic | 40.0% |
| CCAAGTACTCGCTTATCTTT+AGG | - | chr8_3:58422838-58422857 | None:intergenic | 40.0% | |
| CCTAAAGATAAGCGAGTACT+TGG | + | chr8_3:58422835-58422854 | Msa1297840:CDS | 40.0% | |
| GTCAAAAGAAAGCTGCACAA+GGG | - | chr8_3:58422908-58422927 | None:intergenic | 40.0% | |
| TGTCAAAAGAAAGCTGCACA+AGG | - | chr8_3:58422909-58422928 | None:intergenic | 40.0% | |
| !! | CATGTCCAAGATAACGGAAA+AGG | - | chr8_3:58422950-58422969 | None:intergenic | 40.0% |
| ! | CTACTTGTGCTTGTGTTGTT+GGG | + | chr8_3:58422992-58423011 | Msa1297840:CDS | 40.0% |
| GGAGATGAAGGAATATGAAC+TGG | + | chr8_3:58423050-58423069 | Msa1297840:CDS | 40.0% | |
| GAAGGAATATGAACTGGGAA+AGG | + | chr8_3:58423056-58423075 | Msa1297840:CDS | 40.0% | |
| !! | TGTTTTGGATTGCTGTGACA+TGG | + | chr8_3:58423097-58423116 | Msa1297840:CDS | 40.0% |
| ACATGGCAAGTATCTTCCAT+TGG | + | chr8_3:58423114-58423133 | Msa1297840:CDS | 40.0% | |
| AATACAGTGGTACTTCCTGT+AGG | + | chr8_3:58423186-58423205 | Msa1297840:CDS | 40.0% | |
| !!! | TCACCCCATTGATTTTGTCA+TGG | - | chr8_3:58423236-58423255 | None:intergenic | 40.0% |
| GCCTTGATGTTAGCAATATG+GGG | + | chr8_3:58423264-58423283 | Msa1297840:CDS | 40.0% | |
| TCCCCATATTGCTAACATCA+AGG | - | chr8_3:58423268-58423287 | None:intergenic | 40.0% | |
| CTCATCTTCATGAGGTTTCA+AGG | + | chr8_3:58423346-58423365 | Msa1297840:CDS | 40.0% | |
| CATCTTCATGAGGTTTCAAG+GGG | + | chr8_3:58423348-58423367 | Msa1297840:CDS | 40.0% | |
| GCAGTAGTTGTAGTTGATTG+TGG | - | chr8_3:58421479-58421498 | None:intergenic | 40.0% | |
| CAATCAACTACAACTACTGC+AGG | + | chr8_3:58421479-58421498 | Msa1297840:CDS | 40.0% | |
| AACTACAACTACTGCAGGTT+AGG | + | chr8_3:58421484-58421503 | Msa1297840:intron | 40.0% | |
| CCTGTCGCGTTATAAAATAG+GGG | - | chr8_3:58421747-58421766 | None:intergenic | 40.0% | |
| GCAACATTTGTTCAATCAGC+TGG | + | chr8_3:58422451-58422470 | Msa1297840:CDS | 40.0% | |
| ! | ATGTTGGTAGATTTGGCATG+TGG | - | chr8_3:58422514-58422533 | None:intergenic | 40.0% |
| CCAAGTACTCGCTTATCTTT+AGG | - | chr8_3:58422838-58422857 | None:intergenic | 40.0% | |
| CCTAAAGATAAGCGAGTACT+TGG | + | chr8_3:58422835-58422854 | Msa1297840:CDS | 40.0% | |
| GTCAAAAGAAAGCTGCACAA+GGG | - | chr8_3:58422908-58422927 | None:intergenic | 40.0% | |
| TGTCAAAAGAAAGCTGCACA+AGG | - | chr8_3:58422909-58422928 | None:intergenic | 40.0% | |
| !! | CATGTCCAAGATAACGGAAA+AGG | - | chr8_3:58422950-58422969 | None:intergenic | 40.0% |
| ! | CTACTTGTGCTTGTGTTGTT+GGG | + | chr8_3:58422992-58423011 | Msa1297840:CDS | 40.0% |
| GGAGATGAAGGAATATGAAC+TGG | + | chr8_3:58423050-58423069 | Msa1297840:CDS | 40.0% | |
| GAAGGAATATGAACTGGGAA+AGG | + | chr8_3:58423056-58423075 | Msa1297840:CDS | 40.0% | |
| !! | TGTTTTGGATTGCTGTGACA+TGG | + | chr8_3:58423097-58423116 | Msa1297840:CDS | 40.0% |
| ACATGGCAAGTATCTTCCAT+TGG | + | chr8_3:58423114-58423133 | Msa1297840:CDS | 40.0% | |
| AATACAGTGGTACTTCCTGT+AGG | + | chr8_3:58423186-58423205 | Msa1297840:CDS | 40.0% | |
| !!! | TCACCCCATTGATTTTGTCA+TGG | - | chr8_3:58423236-58423255 | None:intergenic | 40.0% |
| GCCTTGATGTTAGCAATATG+GGG | + | chr8_3:58423264-58423283 | Msa1297840:CDS | 40.0% | |
| TCCCCATATTGCTAACATCA+AGG | - | chr8_3:58423268-58423287 | None:intergenic | 40.0% | |
| CTCATCTTCATGAGGTTTCA+AGG | + | chr8_3:58423346-58423365 | Msa1297840:CDS | 40.0% | |
| CATCTTCATGAGGTTTCAAG+GGG | + | chr8_3:58423348-58423367 | Msa1297840:CDS | 40.0% | |
| ACTACTGCAGGTTAGGAACA+TGG | + | chr8_3:58421491-58421510 | Msa1297840:intron | 45.0% | |
| ! | CCCCTATTTTATAACGCGAC+AGG | + | chr8_3:58421744-58421763 | Msa1297840:intron | 45.0% |
| AAGATACTACCGTTGCTCTG+CGG | + | chr8_3:58422114-58422133 | Msa1297840:intron | 45.0% | |
| ! | TTTGCTCTTTTGAGCCGTAC+TGG | + | chr8_3:58422199-58422218 | Msa1297840:intron | 45.0% |
| CACAAGTAGCGACGAAAGAA+GGG | - | chr8_3:58422981-58423000 | None:intergenic | 45.0% | |
| GCTACTTGTGCTTGTGTTGT+TGG | + | chr8_3:58422991-58423010 | Msa1297840:CDS | 45.0% | |
| ! | GTTGTTGGGTTGTTTGCAAG+TGG | + | chr8_3:58423006-58423025 | Msa1297840:CDS | 45.0% |
| GGTTGTTTGCAAGTGGAGAA+TGG | + | chr8_3:58423013-58423032 | Msa1297840:CDS | 45.0% | |
| ACTACTGCAGGTTAGGAACA+TGG | + | chr8_3:58421491-58421510 | Msa1297840:intron | 45.0% | |
| ! | CCCCTATTTTATAACGCGAC+AGG | + | chr8_3:58421744-58421763 | Msa1297840:intron | 45.0% |
| AAGATACTACCGTTGCTCTG+CGG | + | chr8_3:58422114-58422133 | Msa1297840:intron | 45.0% | |
| ! | TTTGCTCTTTTGAGCCGTAC+TGG | + | chr8_3:58422199-58422218 | Msa1297840:intron | 45.0% |
| CACAAGTAGCGACGAAAGAA+GGG | - | chr8_3:58422981-58423000 | None:intergenic | 45.0% | |
| GCTACTTGTGCTTGTGTTGT+TGG | + | chr8_3:58422991-58423010 | Msa1297840:CDS | 45.0% | |
| ! | GTTGTTGGGTTGTTTGCAAG+TGG | + | chr8_3:58423006-58423025 | Msa1297840:CDS | 45.0% |
| GGTTGTTTGCAAGTGGAGAA+TGG | + | chr8_3:58423013-58423032 | Msa1297840:CDS | 45.0% | |
| !!! | ATATTTTTTTAACTAAAAAT+TGG | + | chr8_3:58421778-58421797 | Msa1297840:intron | 5.0% |
| !!! | ATATTTTTTTAACTAAAAAT+TGG | + | chr8_3:58421778-58421797 | Msa1297840:intron | 5.0% |
| CTTGGATTCGTCTTCACCCT+TGG | + | chr8_3:58422853-58422872 | Msa1297840:CDS | 50.0% | |
| GCACAAGTAGCGACGAAAGA+AGG | - | chr8_3:58422982-58423001 | None:intergenic | 50.0% | |
| TCATGAGGTTTCAAGGGGTG+AGG | + | chr8_3:58423353-58423372 | Msa1297840:CDS | 50.0% | |
| CTTGGATTCGTCTTCACCCT+TGG | + | chr8_3:58422853-58422872 | Msa1297840:CDS | 50.0% | |
| GCACAAGTAGCGACGAAAGA+AGG | - | chr8_3:58422982-58423001 | None:intergenic | 50.0% | |
| TCATGAGGTTTCAAGGGGTG+AGG | + | chr8_3:58423353-58423372 | Msa1297840:CDS | 50.0% | |
| TGTCTCTGACCGCAGAGCAA+CGG | - | chr8_3:58422126-58422145 | None:intergenic | 55.0% | |
| ACAGCAAGGATGGGACCTAC+AGG | - | chr8_3:58423204-58423223 | None:intergenic | 55.0% | |
| TGTCTCTGACCGCAGAGCAA+CGG | - | chr8_3:58422126-58422145 | None:intergenic | 55.0% | |
| ACAGCAAGGATGGGACCTAC+AGG | - | chr8_3:58423204-58423223 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 58421357 | 58423389 | 58421357 | ID=Msa1297840;Name=Msa1297840 |
| chr8_3 | mRNA | 58421357 | 58423389 | 58421357 | ID=Msa1297840-mRNA-1;Parent=Msa1297840;Name=Msa1297840-mRNA-1;_AED=0.06;_eAED=0.06;_QI=95|1|0.5|1|1|1|2|0|380 |
| chr8_3 | exon | 58421357 | 58421500 | 58421357 | ID=Msa1297840-mRNA-1:exon:16759;Parent=Msa1297840-mRNA-1 |
| chr8_3 | exon | 58422296 | 58423389 | 58422296 | ID=Msa1297840-mRNA-1:exon:16760;Parent=Msa1297840-mRNA-1 |
| chr8_3 | five_prime_UTR | 58421357 | 58421451 | 58421357 | ID=Msa1297840-mRNA-1:five_prime_utr;Parent=Msa1297840-mRNA-1 |
| chr8_3 | CDS | 58421452 | 58421500 | 58421452 | ID=Msa1297840-mRNA-1:cds;Parent=Msa1297840-mRNA-1 |
| chr8_3 | CDS | 58422296 | 58423389 | 58422296 | ID=Msa1297840-mRNA-1:cds;Parent=Msa1297840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
