Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302580 | XP_003610500.1 | 88.511 | 235 | 7 | 1 | 1 | 235 | 1 | 215 | 1.23e-145 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302580 | sp|Q8GYK2|SOBRL_ARATH | 70.435 | 230 | 48 | 1 | 3 | 232 | 47 | 256 | 7.42e-119 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302580 | G7JKH0 | 88.511 | 235 | 7 | 1 | 1 | 235 | 1 | 215 | 5.87e-146 | 415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1224580 | Msa1302580 | 0.820553 | 6.453016e-53 | -8.615850e-47 |
| Msa1263290 | Msa1302580 | 0.858547 | 7.644630e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302580 | MtrunA17_Chr4g0075571 | 88.511 | 235 | 7 | 1 | 1 | 235 | 1 | 215 | 1.13e-149 | 415 |
| Msa1302580 | MtrunA17_Chr2g0332581 | 25.926 | 243 | 133 | 7 | 7 | 231 | 37 | 250 | 1.36e-15 | 73.9 |
| Msa1302580 | MtrunA17_Chr4g0003791 | 28.395 | 243 | 127 | 9 | 7 | 231 | 38 | 251 | 6.64e-15 | 72.4 |
| Msa1302580 | MtrunA17_Chr3g0138041 | 27.347 | 245 | 127 | 7 | 7 | 231 | 37 | 250 | 1.11e-14 | 71.2 |
| Msa1302580 | MtrunA17_Chr2g0306861 | 25.806 | 248 | 133 | 7 | 4 | 231 | 32 | 248 | 1.65e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302580 | AT4G22300.1 | 70.435 | 230 | 48 | 1 | 3 | 232 | 47 | 256 | 7.54e-120 | 342 |
| Msa1302580 | AT4G22305.1 | 63.948 | 233 | 64 | 1 | 3 | 235 | 2 | 214 | 2.51e-105 | 304 |
| Msa1302580 | AT4G22305.2 | 60.465 | 172 | 48 | 1 | 3 | 174 | 2 | 153 | 1.91e-67 | 207 |
| Msa1302580 | AT5G20060.1 | 26.939 | 245 | 133 | 6 | 4 | 231 | 33 | 248 | 8.19e-14 | 69.3 |
| Msa1302580 | AT5G20060.4 | 26.939 | 245 | 133 | 6 | 4 | 231 | 33 | 248 | 8.19e-14 | 69.3 |
| Msa1302580 | AT5G20060.3 | 26.939 | 245 | 133 | 6 | 4 | 231 | 33 | 248 | 8.19e-14 | 69.3 |
| Msa1302580 | AT5G20060.2 | 26.939 | 245 | 133 | 6 | 4 | 231 | 33 | 248 | 8.19e-14 | 69.3 |
| Msa1302580 | AT1G18773.2 | 55.769 | 52 | 21 | 1 | 155 | 206 | 11 | 60 | 5.06e-12 | 59.7 |
| Msa1302580 | AT1G18773.1 | 55.769 | 52 | 21 | 1 | 155 | 206 | 11 | 60 | 6.00e-12 | 59.7 |
| Msa1302580 | AT1G18773.3 | 55.769 | 52 | 21 | 1 | 155 | 206 | 11 | 60 | 8.25e-12 | 59.3 |
| Msa1302580 | AT1G18773.4 | 55.769 | 52 | 21 | 1 | 155 | 206 | 11 | 60 | 1.50e-11 | 58.9 |
Find 77 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAAACTTTGGTGCTTAT+TGG | 0.162206 | 8_3:+65158816 | Msa1302580:CDS |
| TGGTGTTAGTTGCGAGTTTA+AGG | 0.172548 | 8_3:+65160084 | Msa1302580:CDS |
| TGTTGTTCACAATATTTAAT+AGG | 0.260593 | 8_3:+65160352 | Msa1302580:three_prime_UTR |
| CTGTTGTACCCTAAAACTTT+AGG | 0.267673 | 8_3:+65159300 | Msa1302580:CDS |
| ACCAATAAGCACCAAAGTTT+TGG | 0.273846 | 8_3:-65158817 | None:intergenic |
| CCACAGATAAATATATTGTT+AGG | 0.286098 | 8_3:-65159158 | None:intergenic |
| CAGCCCATGGGACCATAGTA+TGG | 0.302977 | 8_3:-65160002 | None:intergenic |
| ATGGTTCTGTAATGCCTTCA+TGG | 0.330844 | 8_3:+65158117 | Msa1302580:CDS |
| AAGCATATATTCAAATTATT+AGG | 0.331571 | 8_3:-65160280 | None:intergenic |
| AATAATATGCATACAGTTGC+AGG | 0.332819 | 8_3:-65157201 | None:intergenic |
| GTGATTGTTAACAGTAGAAT+TGG | 0.335173 | 8_3:-65156945 | None:intergenic |
| TTGCACCGTTCTCTTATAGA+TGG | 0.337081 | 8_3:+65158781 | Msa1302580:CDS |
| AGCAAACTATTCTCGTCGTT+TGG | 0.346185 | 8_3:-65159077 | None:intergenic |
| ATTTACATTATAGGACATCT+TGG | 0.408560 | 8_3:+65156587 | Msa1302580:five_prime_UTR |
| TCCTTCTGCTCCTCACGCTC+CGG | 0.418740 | 8_3:+65157175 | Msa1302580:CDS |
| GTTCTGTGGTTACACGGTCT+TGG | 0.419005 | 8_3:+65157077 | Msa1302580:CDS |
| TATTGTTTCAGTGACGTGTT+TGG | 0.420938 | 8_3:+65156883 | Msa1302580:intron |
| ATAAGTACCCGCTTAGCTTC+AGG | 0.433033 | 8_3:-65159384 | None:intergenic |
| TGGTATTATTAGGCTTATCC+TGG | 0.441301 | 8_3:+65160183 | Msa1302580:intron |
| GTCTTGATGGGTTCATTGGC+AGG | 0.441657 | 8_3:-65157110 | None:intergenic |
| TAATGTCTTGATGGGTTCAT+TGG | 0.446375 | 8_3:-65157114 | None:intergenic |
| CTCCTCGTTGTTTATTGAGT+GGG | 0.455255 | 8_3:-65160211 | None:intergenic |
| AGAAGTGAATAATGTCTTGA+TGG | 0.461638 | 8_3:-65157123 | None:intergenic |
| TTTACATTATAGGACATCTT+GGG | 0.462937 | 8_3:+65156588 | Msa1302580:five_prime_UTR |
| TTTGGAATTCCGCCACGGCT+TGG | 0.463686 | 8_3:+65156901 | Msa1302580:five_prime_UTR |
| CACAGATAAATATATTGTTA+GGG | 0.468738 | 8_3:-65159157 | None:intergenic |
| AGCAGAAGGAAAAGACCATT+TGG | 0.468754 | 8_3:-65157162 | None:intergenic |
| TCTTGATCTCATGTCATTGT+GGG | 0.469043 | 8_3:+65160383 | Msa1302580:three_prime_UTR |
| AGCTAAAGCATCTTGAGTCT+TGG | 0.470537 | 8_3:+65160232 | Msa1302580:CDS |
| CATACTATGGTCCCATGGGC+TGG | 0.472438 | 8_3:+65160003 | Msa1302580:CDS |
| TTATACAGACACCCATACTA+TGG | 0.480186 | 8_3:+65159990 | Msa1302580:intron |
| TCTGTAGCAGATGAATTAAA+CGG | 0.483937 | 8_3:-65159351 | None:intergenic |
| CATTTGGTACTTCTGAATTG+AGG | 0.492380 | 8_3:-65157146 | None:intergenic |
| TGCATACAGTTGCAGGTGAC+CGG | 0.492555 | 8_3:-65157194 | None:intergenic |
| CTCAATTCAGAAGTACCAAA+TGG | 0.494388 | 8_3:+65157147 | Msa1302580:CDS |
| TTTCACCCGTGCTGTCGCAC+GGG | 0.515404 | 8_3:-65156673 | None:intergenic |
| CATATATTCAAATTATTAGG+AGG | 0.518041 | 8_3:-65160277 | None:intergenic |
| CACCTCCTAAACCAAAACTT+TGG | 0.520302 | 8_3:+65158806 | Msa1302580:CDS |
| GATTCGTTATACGCTCCGTC+AGG | 0.520956 | 8_3:+65156752 | Msa1302580:five_prime_UTR |
| ACAAAACTTCGAGCCGCCAT+TGG | 0.521401 | 8_3:-65157056 | None:intergenic |
| TTTATTGAGTGGGCAAGACC+AGG | 0.534942 | 8_3:-65160201 | None:intergenic |
| GCTCCTCGTTGTTTATTGAG+TGG | 0.540846 | 8_3:-65160212 | None:intergenic |
| TACCCTAAAACTTTAGGTGG+AGG | 0.541302 | 8_3:+65159306 | Msa1302580:CDS |
| CCTAACAATATATTTATCTG+TGG | 0.541354 | 8_3:+65159158 | Msa1302580:CDS |
| AATTACACCTGAAGCTAAGC+GGG | 0.545193 | 8_3:+65159377 | Msa1302580:CDS |
| TTCTTGATCTCATGTCATTG+TGG | 0.550457 | 8_3:+65160382 | Msa1302580:three_prime_UTR |
| TTACACGGTCTTGGTGACTC+TGG | 0.551312 | 8_3:+65157086 | Msa1302580:CDS |
| TTTATCTGTGGGTTCAGTCA+AGG | 0.556548 | 8_3:+65159170 | Msa1302580:CDS |
| GTTTATAACGTTCCAAGCCG+TGG | 0.557307 | 8_3:-65156913 | None:intergenic |
| ACCGGAGCGTGAGGAGCAGA+AGG | 0.561036 | 8_3:-65157176 | None:intergenic |
| TGAGACCCGTGCGACAGCAC+GGG | 0.564019 | 8_3:+65156668 | Msa1302580:five_prime_UTR |
| GTTAGATAAACTTACGGCGG+GGG | 0.567999 | 8_3:-65156776 | None:intergenic |
| GAAGTGAATAATGTCTTGAT+GGG | 0.571272 | 8_3:-65157122 | None:intergenic |
| CACCCATACTATGGTCCCAT+GGG | 0.572624 | 8_3:+65159999 | Msa1302580:CDS |
| TCAACCACCTTAGACCCTGC+CGG | 0.575239 | 8_3:+65156720 | Msa1302580:five_prime_UTR |
| TCATGAATGTCAAACCATGA+AGG | 0.576481 | 8_3:-65158131 | None:intergenic |
| AAAACAGTATTGTTCGAGGC+AGG | 0.580046 | 8_3:+65160031 | Msa1302580:CDS |
| TTGTACCCTAAAACTTTAGG+TGG | 0.581553 | 8_3:+65159303 | Msa1302580:CDS |
| GCTAGACTTACAGCAGTCAC+AGG | 0.585127 | 8_3:-65158158 | None:intergenic |
| CTAACAATATATTTATCTGT+GGG | 0.585694 | 8_3:+65159159 | Msa1302580:CDS |
| GTGAGACCCGTGCGACAGCA+CGG | 0.590152 | 8_3:+65156667 | Msa1302580:five_prime_UTR |
| AGCCCATGGGACCATAGTAT+GGG | 0.591504 | 8_3:-65160001 | None:intergenic |
| TGACAAAACAGTATTGTTCG+AGG | 0.612436 | 8_3:+65160027 | Msa1302580:CDS |
| ATAGACAAGGAAGTAGCTGC+TGG | 0.614205 | 8_3:+65159128 | Msa1302580:CDS |
| TTCTCCGGCAGGGTCTAAGG+TGG | 0.616037 | 8_3:-65156724 | None:intergenic |
| GAAAATAGAGAAAGTCATAG+AGG | 0.619475 | 8_3:-65160325 | None:intergenic |
| TTAGATAAACTTACGGCGGG+GGG | 0.632612 | 8_3:-65156775 | None:intergenic |
| ATTATTAGGAGGAACTCTGT+AGG | 0.635045 | 8_3:-65160266 | None:intergenic |
| GAGAAAGTCATAGAGGTCAG+CGG | 0.643692 | 8_3:-65160318 | None:intergenic |
| ATCTGTGGGTTCAGTCAAGG+AGG | 0.657320 | 8_3:+65159173 | Msa1302580:CDS |
| GTGCACCATCTATAAGAGAA+CGG | 0.659599 | 8_3:-65158786 | None:intergenic |
| TATAACGTTCCAAGCCGTGG+CGG | 0.660943 | 8_3:-65156910 | None:intergenic |
| ACGTGTTTGGAATTCCGCCA+CGG | 0.661265 | 8_3:+65156896 | Msa1302580:five_prime_UTR |
| TGTTCATGCTACAATAGACA+AGG | 0.664047 | 8_3:+65159115 | Msa1302580:CDS |
| CAGAACACTAGCCAATGTCA+AGG | 0.665097 | 8_3:-65159280 | None:intergenic |
| AAATTACACCTGAAGCTAAG+CGG | 0.677674 | 8_3:+65159376 | Msa1302580:CDS |
| TGCCCACTCAATAAACAACG+AGG | 0.786416 | 8_3:+65160209 | Msa1302580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATTATTGTTTAATTTT+GGG | + | chr8_3:65158406-65158425 | Msa1302580:intron | 10.0% |
| !! | AATTGAAAAGATATAAAAGA+TGG | - | chr8_3:65156801-65156820 | None:intergenic | 15.0% |
| !! | TGTAAAATTAGGTATATATT+TGG | - | chr8_3:65157762-65157781 | None:intergenic | 15.0% |
| !!! | CAACATAATTTTGTAAAATT+AGG | - | chr8_3:65157773-65157792 | None:intergenic | 15.0% |
| !! | TTAATATCTCATTTGTAATT+TGG | - | chr8_3:65157999-65158018 | None:intergenic | 15.0% |
| !!! | ATAATATCATTTTCTAAAGT+CGG | - | chr8_3:65158073-65158092 | None:intergenic | 15.0% |
| !!! | GTTGAATTATTGTTTAATTT+TGG | + | chr8_3:65158405-65158424 | Msa1302580:intron | 15.0% |
| !!! | CTAAAAAGTATATATAACAA+AGG | - | chr8_3:65158736-65158755 | None:intergenic | 15.0% |
| !!! | ATATATCCATTTTTCTATTA+AGG | - | chr8_3:65159220-65159239 | None:intergenic | 15.0% |
| !! | TATTAACTTTCTGTATTTAA+AGG | - | chr8_3:65159637-65159656 | None:intergenic | 15.0% |
| !! | TAAATCATTATGTTATATGT+AGG | + | chr8_3:65159848-65159867 | Msa1302580:intron | 15.0% |
| !! | AAATCATTATGTTATATGTA+GGG | + | chr8_3:65159849-65159868 | Msa1302580:intron | 15.0% |
| !!! | ATTTGATTTATTGAATTTTC+TGG | + | chr8_3:65159920-65159939 | Msa1302580:intron | 15.0% |
| !! | GAAAAAATAACCAAATTATA+GGG | - | chr8_3:65160124-65160143 | None:intergenic | 15.0% |
| !! | TGAAAAAATAACCAAATTAT+AGG | - | chr8_3:65160125-65160144 | None:intergenic | 15.0% |
| !! | AAGCATATATTCAAATTATT+AGG | - | chr8_3:65160283-65160302 | None:intergenic | 15.0% |
| !! | TCGATAATAATTAAGAAAAG+AGG | - | chr8_3:65157243-65157262 | None:intergenic | 20.0% |
| !! | ACATATTAGTATAGCTTATA+TGG | + | chr8_3:65157541-65157560 | Msa1302580:intron | 20.0% |
| !! | TTTATTAAAATATGACCTTG+CGG | + | chr8_3:65157661-65157680 | Msa1302580:intron | 20.0% |
| !!! | TAATATCATTTTCTAAAGTC+GGG | - | chr8_3:65158072-65158091 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATTCTTTGTAGA+TGG | + | chr8_3:65158098-65158117 | Msa1302580:intron | 20.0% |
| !! | TTGTACAGAATTAATATACA+GGG | - | chr8_3:65158236-65158255 | None:intergenic | 20.0% |
| !! | ATTGTACAGAATTAATATAC+AGG | - | chr8_3:65158237-65158256 | None:intergenic | 20.0% |
| !! | AATGTAGTAAGAATACAAAT+TGG | + | chr8_3:65158363-65158382 | Msa1302580:intron | 20.0% |
| !! | TTACTAAGTTAACAATTAAG+AGG | - | chr8_3:65158571-65158590 | None:intergenic | 20.0% |
| !! | ACATCATATAACAATCTTAA+AGG | + | chr8_3:65158897-65158916 | Msa1302580:intron | 20.0% |
| !! | CACAGATAAATATATTGTTA+GGG | - | chr8_3:65159160-65159179 | None:intergenic | 20.0% |
| !! | CTAACAATATATTTATCTGT+GGG | + | chr8_3:65159159-65159178 | Msa1302580:CDS | 20.0% |
| !! | TTATGTGGAAATATTTAGTT+TGG | + | chr8_3:65159519-65159538 | Msa1302580:intron | 20.0% |
| !!! | AAATAAATATGCTGTTTCAA+AGG | - | chr8_3:65159557-65159576 | None:intergenic | 20.0% |
| !!! | GTCGATAATATTTTCAATTT+AGG | + | chr8_3:65159795-65159814 | Msa1302580:intron | 20.0% |
| !! | TATTGACATTTGGTATTATT+AGG | + | chr8_3:65160173-65160192 | Msa1302580:intron | 20.0% |
| !! | CATATATTCAAATTATTAGG+AGG | - | chr8_3:65160280-65160299 | None:intergenic | 20.0% |
| !! | TGTTGTTCACAATATTTAAT+AGG | + | chr8_3:65160352-65160371 | Msa1302580:three_prime_UTR | 20.0% |
| ! | ATTTACATTATAGGACATCT+TGG | + | chr8_3:65156587-65156606 | Msa1302580:five_prime_UTR | 25.0% |
| ! | TTTACATTATAGGACATCTT+GGG | + | chr8_3:65156588-65156607 | Msa1302580:five_prime_UTR | 25.0% |
| ! | AAGATGGTTAGATAAACTTA+CGG | - | chr8_3:65156785-65156804 | None:intergenic | 25.0% |
| !! | TTATTATGAAACGTGGTTTT+GGG | - | chr8_3:65157005-65157024 | None:intergenic | 25.0% |
| !! | ATTATTATGAAACGTGGTTT+TGG | - | chr8_3:65157006-65157025 | None:intergenic | 25.0% |
| ! | AGAAGAATTATTATGAAACG+TGG | - | chr8_3:65157012-65157031 | None:intergenic | 25.0% |
| ! | AAACTAAACCTATGTAACAA+TGG | - | chr8_3:65157295-65157314 | None:intergenic | 25.0% |
| !! | CCATGTCTTTAAATTGTTTT+CGG | + | chr8_3:65157482-65157501 | Msa1302580:intron | 25.0% |
| ! | TAGTATAGCTTATATGGAAA+TGG | + | chr8_3:65157547-65157566 | Msa1302580:intron | 25.0% |
| ! | ATATATTTGGACATCTATTG+TGG | - | chr8_3:65157749-65157768 | None:intergenic | 25.0% |
| ! | AGGACAGATCATATATTAAT+AGG | - | chr8_3:65157934-65157953 | None:intergenic | 25.0% |
| ! | TTCTGTACAATTAATCATGA+AGG | + | chr8_3:65158246-65158265 | Msa1302580:intron | 25.0% |
| ! | TCTGTACAATTAATCATGAA+GGG | + | chr8_3:65158247-65158266 | Msa1302580:intron | 25.0% |
| !!! | ATCCTTATTTTTAGTATGCT+TGG | + | chr8_3:65158301-65158320 | Msa1302580:intron | 25.0% |
| !!! | TCCTTATTTTTAGTATGCTT+GGG | + | chr8_3:65158302-65158321 | Msa1302580:intron | 25.0% |
| !! | TGATTTTGTACATTTATCGT+GGG | + | chr8_3:65158477-65158496 | Msa1302580:intron | 25.0% |
| ! | TAGTAAGCAAACAATTATTG+AGG | - | chr8_3:65158640-65158659 | None:intergenic | 25.0% |
| ! | TATATGATGTTTACAAGACA+TGG | - | chr8_3:65158887-65158906 | None:intergenic | 25.0% |
| ! | CCACAGATAAATATATTGTT+AGG | - | chr8_3:65159161-65159180 | None:intergenic | 25.0% |
| ! | CCTAACAATATATTTATCTG+TGG | + | chr8_3:65159158-65159177 | Msa1302580:CDS | 25.0% |
| ! | TAAATTAGTGTCTTGACAAA+TGG | - | chr8_3:65159881-65159900 | None:intergenic | 25.0% |
| ! | AAGACACTAATTTATATAGC+TGG | + | chr8_3:65159887-65159906 | Msa1302580:intron | 25.0% |
| !!! | AACTAACACCAATTTTTTCA+AGG | - | chr8_3:65160075-65160094 | None:intergenic | 25.0% |
| ! | TCCATATCAATATTGACATT+TGG | + | chr8_3:65160163-65160182 | Msa1302580:intron | 25.0% |
| ! | ACCAAATGTCAATATTGATA+TGG | - | chr8_3:65160167-65160186 | None:intergenic | 25.0% |
| !!! | ATAACGAATCTTGTTTTCTC+CGG | - | chr8_3:65156742-65156761 | None:intergenic | 30.0% |
| GTGATTGTTAACAGTAGAAT+TGG | - | chr8_3:65156948-65156967 | None:intergenic | 30.0% | |
| !! | TATTATGAAACGTGGTTTTG+GGG | - | chr8_3:65157004-65157023 | None:intergenic | 30.0% |
| TTCTTCTTCTTCTGTAGTAA+CGG | + | chr8_3:65157028-65157047 | Msa1302580:intron | 30.0% | |
| GAAGTGAATAATGTCTTGAT+GGG | - | chr8_3:65157125-65157144 | None:intergenic | 30.0% | |
| AGAAGTGAATAATGTCTTGA+TGG | - | chr8_3:65157126-65157145 | None:intergenic | 30.0% | |
| AATAATATGCATACAGTTGC+AGG | - | chr8_3:65157204-65157223 | None:intergenic | 30.0% | |
| !! | TGTTAGAGCTTTAAGGAAAA+AGG | + | chr8_3:65157454-65157473 | Msa1302580:intron | 30.0% |
| CCGAAAACAATTTAAAGACA+TGG | - | chr8_3:65157485-65157504 | None:intergenic | 30.0% | |
| AAACTATCATGTAGAGCTTA+TGG | - | chr8_3:65157515-65157534 | None:intergenic | 30.0% | |
| ACATGCTCATGGAATTAATT+AGG | + | chr8_3:65157854-65157873 | Msa1302580:intron | 30.0% | |
| !!! | CCTTATTTTTAGTATGCTTG+GGG | + | chr8_3:65158303-65158322 | Msa1302580:intron | 30.0% |
| !!! | GTTTAATTTTGGGTTACTAG+AGG | + | chr8_3:65158416-65158435 | Msa1302580:intron | 30.0% |
| ! | GTGATTTTGTACATTTATCG+TGG | + | chr8_3:65158476-65158495 | Msa1302580:intron | 30.0% |
| TTCACTTGAGAAAGATGAAA+AGG | - | chr8_3:65158701-65158720 | None:intergenic | 30.0% | |
| TTTGAACTAAAAACAGAGAG+AGG | - | chr8_3:65158925-65158944 | None:intergenic | 30.0% | |
| !! | CAATTACTTTTATCCTCTTC+AGG | + | chr8_3:65158991-65159010 | Msa1302580:intron | 30.0% |
| ! | TGTAGCATGAACATTTTGAA+CGG | - | chr8_3:65159108-65159127 | None:intergenic | 30.0% |
| TCTGTAGCAGATGAATTAAA+CGG | - | chr8_3:65159354-65159373 | None:intergenic | 30.0% | |
| !! | AAATATGCTGTTTCAAAGGA+CGG | - | chr8_3:65159553-65159572 | None:intergenic | 30.0% |
| ! | CACATAAGGTTTTCTCTATT+GGG | - | chr8_3:65159612-65159631 | None:intergenic | 30.0% |
| ! | ACACATAAGGTTTTCTCTAT+TGG | - | chr8_3:65159613-65159632 | None:intergenic | 30.0% |
| ! | TGTATTTAAAGGCACACATA+AGG | - | chr8_3:65159626-65159645 | None:intergenic | 30.0% |
| TTAAAGAAAACCAGTTGAAC+TGG | - | chr8_3:65159699-65159718 | None:intergenic | 30.0% | |
| !!! | TCAACTGGTTTTCTTTAATC+AGG | + | chr8_3:65159701-65159720 | Msa1302580:intron | 30.0% |
| !!! | CAACTGGTTTTCTTTAATCA+GGG | + | chr8_3:65159702-65159721 | Msa1302580:intron | 30.0% |
| TAATGATTTATTCGAGTGCA+AGG | - | chr8_3:65159838-65159857 | None:intergenic | 30.0% | |
| ! | CAGGTCAACAAAATTTTAGA+TGG | - | chr8_3:65159956-65159975 | None:intergenic | 30.0% |
| !! | CATCTAAAATTTTGTTGACC+TGG | + | chr8_3:65159954-65159973 | Msa1302580:intron | 30.0% |
| TATAACATTGTGTACATACC+AGG | - | chr8_3:65159975-65159994 | None:intergenic | 30.0% | |
| !!! | AATTTTTTCAAGGAAAGGAG+GGG | - | chr8_3:65160065-65160084 | None:intergenic | 30.0% |
| !!! | CAATTTTTTCAAGGAAAGGA+GGG | - | chr8_3:65160066-65160085 | None:intergenic | 30.0% |
| !!! | ACACCAATTTTTTCAAGGAA+AGG | - | chr8_3:65160070-65160089 | None:intergenic | 30.0% |
| ATTCCAAGTTCCCTATAATT+TGG | + | chr8_3:65160111-65160130 | Msa1302580:intron | 30.0% | |
| TAACCAAATTATAGGGAACT+TGG | - | chr8_3:65160117-65160136 | None:intergenic | 30.0% | |
| TTGATATGGACAGAATTGTA+GGG | - | chr8_3:65160153-65160172 | None:intergenic | 30.0% | |
| ATTGATATGGACAGAATTGT+AGG | - | chr8_3:65160154-65160173 | None:intergenic | 30.0% | |
| GAAAATAGAGAAAGTCATAG+AGG | - | chr8_3:65160328-65160347 | None:intergenic | 30.0% | |
| AGGAAAAGAAAAAGAAAAGG+AGG | - | chr8_3:65160426-65160445 | None:intergenic | 30.0% | |
| ! | TCCTTTTCTTTTTCTTTTCC+TGG | + | chr8_3:65160425-65160444 | Msa1302580:three_prime_UTR | 30.0% |
| ACCAGGAAAAGAAAAAGAAA+AGG | - | chr8_3:65160429-65160448 | None:intergenic | 30.0% | |
| CAAAAAGCAAAACTATACCA+AGG | - | chr8_3:65160469-65160488 | None:intergenic | 30.0% | |
| !! | TTTTTGTCTGCATTGGTATA+TGG | + | chr8_3:65160483-65160502 | Msa1302580:three_prime_UTR | 30.0% |
| ATGGTTAGATAAACTTACGG+CGG | - | chr8_3:65156782-65156801 | None:intergenic | 35.0% | |
| CACTGAAACAATAAAGGGAA+AGG | - | chr8_3:65156876-65156895 | None:intergenic | 35.0% | |
| CACGTCACTGAAACAATAAA+GGG | - | chr8_3:65156881-65156900 | None:intergenic | 35.0% | |
| ACACGTCACTGAAACAATAA+AGG | - | chr8_3:65156882-65156901 | None:intergenic | 35.0% | |
| TATTGTTTCAGTGACGTGTT+TGG | + | chr8_3:65156883-65156902 | Msa1302580:intron | 35.0% | |
| ! | TGTAGTAACGGAAAAACCAA+TGG | + | chr8_3:65157040-65157059 | Msa1302580:intron | 35.0% |
| !!! | AGTTTTGTTCTGTGGTTACA+CGG | + | chr8_3:65157071-65157090 | Msa1302580:CDS | 35.0% |
| !! | TAATGTCTTGATGGGTTCAT+TGG | - | chr8_3:65157117-65157136 | None:intergenic | 35.0% |
| CATTTGGTACTTCTGAATTG+AGG | - | chr8_3:65157149-65157168 | None:intergenic | 35.0% | |
| !! | CTCAATTCAGAAGTACCAAA+TGG | + | chr8_3:65157147-65157166 | Msa1302580:CDS | 35.0% |
| AAATTGAAGCTGCTCTGTTA+TGG | + | chr8_3:65157346-65157365 | Msa1302580:intron | 35.0% | |
| AAGTCAATTCAAAATGACCC+TGG | - | chr8_3:65157393-65157412 | None:intergenic | 35.0% | |
| ! | AACAGTCTCAAATGTGCTTT+TGG | - | chr8_3:65157434-65157453 | None:intergenic | 35.0% |
| ! | GACTGTTTGTTAGAGCTTTA+AGG | + | chr8_3:65157447-65157466 | Msa1302580:intron | 35.0% |
| ACAATTTCTGATTCTGAGTG+AGG | + | chr8_3:65157887-65157906 | Msa1302580:intron | 35.0% | |
| GAAAACTCAAGTCTAGACAT+AGG | - | chr8_3:65157966-65157985 | None:intergenic | 35.0% | |
| ! | ATCACTTGAGATGCCATTTA+TGG | + | chr8_3:65158020-65158039 | Msa1302580:intron | 35.0% |
| ! | TCACTTGAGATGCCATTTAT+GGG | + | chr8_3:65158021-65158040 | Msa1302580:intron | 35.0% |
| TCATGAATGTCAAACCATGA+AGG | - | chr8_3:65158134-65158153 | None:intergenic | 35.0% | |
| CCCCAAGCATACTAAAAATA+AGG | - | chr8_3:65158306-65158325 | None:intergenic | 35.0% | |
| AAATCACACTTACTGTCATG+TGG | - | chr8_3:65158463-65158482 | None:intergenic | 35.0% | |
| TTCAACTATCCACTTGACAA+TGG | + | chr8_3:65158511-65158530 | Msa1302580:intron | 35.0% | |
| TCAACTATCCACTTGACAAT+GGG | + | chr8_3:65158512-65158531 | Msa1302580:intron | 35.0% | |
| CAGTTATAGTCAGTACAATG+TGG | - | chr8_3:65158666-65158685 | None:intergenic | 35.0% | |
| !!! | AAGCACCAAAGTTTTGGTTT+AGG | - | chr8_3:65158814-65158833 | None:intergenic | 35.0% |
| !! | ACCAAAACTTTGGTGCTTAT+TGG | + | chr8_3:65158816-65158835 | Msa1302580:CDS | 35.0% |
| ! | ACCAATAAGCACCAAAGTTT+TGG | - | chr8_3:65158820-65158839 | None:intergenic | 35.0% |
| TGTTCATGCTACAATAGACA+AGG | + | chr8_3:65159115-65159134 | Msa1302580:CDS | 35.0% | |
| ! | CATTTTTCTATTAAGGACGC+GGG | - | chr8_3:65159213-65159232 | None:intergenic | 35.0% |
| !! | CCATTTTTCTATTAAGGACG+CGG | - | chr8_3:65159214-65159233 | None:intergenic | 35.0% |
| !! | AAATGGTGACATTGTTTTGC+AGG | + | chr8_3:65159255-65159274 | Msa1302580:intron | 35.0% |
| CTGTTGTACCCTAAAACTTT+AGG | + | chr8_3:65159300-65159319 | Msa1302580:CDS | 35.0% | |
| TTGTACCCTAAAACTTTAGG+TGG | + | chr8_3:65159303-65159322 | Msa1302580:CDS | 35.0% | |
| AAATTACACCTGAAGCTAAG+CGG | + | chr8_3:65159376-65159395 | Msa1302580:CDS | 35.0% | |
| CAATCAGAGAAAATGGATAC+GGG | - | chr8_3:65159483-65159502 | None:intergenic | 35.0% | |
| GCAATCAGAGAAAATGGATA+CGG | - | chr8_3:65159484-65159503 | None:intergenic | 35.0% | |
| CACATAAACATTTGATGCAG+AGG | - | chr8_3:65159506-65159525 | None:intergenic | 35.0% | |
| CTCTGCATCAAATGTTTATG+TGG | + | chr8_3:65159504-65159523 | Msa1302580:intron | 35.0% | |
| ! | TAAGGTTTTCTCTATTGGGT+CGG | - | chr8_3:65159608-65159627 | None:intergenic | 35.0% |
| TGAACTGGAATGCTTTACTA+TGG | - | chr8_3:65159684-65159703 | None:intergenic | 35.0% | |
| ! | TGGTTTTCTTTAATCAGGGT+CGG | + | chr8_3:65159706-65159725 | Msa1302580:intron | 35.0% |
| TGTATACCGATGACAACAAT+AGG | - | chr8_3:65159732-65159751 | None:intergenic | 35.0% | |
| TGATAAGTGTAATCGTTCCA+AGG | - | chr8_3:65159760-65159779 | None:intergenic | 35.0% | |
| TTATACAGACACCCATACTA+TGG | + | chr8_3:65159990-65160009 | Msa1302580:intron | 35.0% | |
| TGACAAAACAGTATTGTTCG+AGG | + | chr8_3:65160027-65160046 | Msa1302580:CDS | 35.0% | |
| !!! | CCAATTTTTTCAAGGAAAGG+AGG | - | chr8_3:65160067-65160086 | None:intergenic | 35.0% |
| CCTCCTTTCCTTGAAAAAAT+TGG | + | chr8_3:65160064-65160083 | Msa1302580:CDS | 35.0% | |
| TGATATGGACAGAATTGTAG+GGG | - | chr8_3:65160152-65160171 | None:intergenic | 35.0% | |
| TGGTATTATTAGGCTTATCC+TGG | + | chr8_3:65160183-65160202 | Msa1302580:intron | 35.0% | |
| ATTATTAGGAGGAACTCTGT+AGG | - | chr8_3:65160269-65160288 | None:intergenic | 35.0% | |
| TTCTTGATCTCATGTCATTG+TGG | + | chr8_3:65160382-65160401 | Msa1302580:three_prime_UTR | 35.0% | |
| TCTTGATCTCATGTCATTGT+GGG | + | chr8_3:65160383-65160402 | Msa1302580:three_prime_UTR | 35.0% | |
| !!! | GTTTTGCTTTTTGTCTGCAT+TGG | + | chr8_3:65160476-65160495 | Msa1302580:three_prime_UTR | 35.0% |
| TGGTTAGATAAACTTACGGC+GGG | - | chr8_3:65156781-65156800 | None:intergenic | 40.0% | |
| ! | AGTAACGGAAAAACCAATGG+CGG | + | chr8_3:65157043-65157062 | Msa1302580:intron | 40.0% |
| AGCAGAAGGAAAAGACCATT+TGG | - | chr8_3:65157165-65157184 | None:intergenic | 40.0% | |
| ! | TGTCTGTGCCATTGTTACAT+AGG | + | chr8_3:65157284-65157303 | Msa1302580:intron | 40.0% |
| ! | ACAGAGCAGCTTCAATTTTG+TGG | - | chr8_3:65157344-65157363 | None:intergenic | 40.0% |
| CTGGATAATATTCCCAGAAG+GGG | - | chr8_3:65157374-65157393 | None:intergenic | 40.0% | |
| CCTGGATAATATTCCCAGAA+GGG | - | chr8_3:65157375-65157394 | None:intergenic | 40.0% | |
| ! | CCTTCTGGGAATATTATCCA+GGG | + | chr8_3:65157373-65157392 | Msa1302580:intron | 40.0% |
| AGTCTAGACATAGGTGGAAT+AGG | - | chr8_3:65157957-65157976 | None:intergenic | 40.0% | |
| AACTCAAGTCTAGACATAGG+TGG | - | chr8_3:65157963-65157982 | None:intergenic | 40.0% | |
| ! | CTAGACTTGAGTTTTCTGCT+TGG | + | chr8_3:65157970-65157989 | Msa1302580:intron | 40.0% |
| GCTAATAGGTTGCCCATAAA+TGG | - | chr8_3:65158036-65158055 | None:intergenic | 40.0% | |
| GAAGCTGATTGCAAGCTAAT+AGG | - | chr8_3:65158050-65158069 | None:intergenic | 40.0% | |
| ! | ATGGTTCTGTAATGCCTTCA+TGG | + | chr8_3:65158117-65158136 | Msa1302580:CDS | 40.0% |
| CACAGCAGAAATGTGGAAAA+TGG | - | chr8_3:65158340-65158359 | None:intergenic | 40.0% | |
| ! | CATTTTGCACAGCAGAAATG+TGG | - | chr8_3:65158347-65158366 | None:intergenic | 40.0% |
| TTGTACATTTATCGTGGGTG+TGG | + | chr8_3:65158482-65158501 | Msa1302580:intron | 40.0% | |
| AACTCATTCCCATTGTCAAG+TGG | - | chr8_3:65158523-65158542 | None:intergenic | 40.0% | |
| TTGCACCGTTCTCTTATAGA+TGG | + | chr8_3:65158781-65158800 | Msa1302580:CDS | 40.0% | |
| GTGCACCATCTATAAGAGAA+CGG | - | chr8_3:65158789-65158808 | None:intergenic | 40.0% | |
| CACCTCCTAAACCAAAACTT+TGG | + | chr8_3:65158806-65158825 | Msa1302580:CDS | 40.0% | |
| !!! | CACCAAAGTTTTGGTTTAGG+AGG | - | chr8_3:65158811-65158830 | None:intergenic | 40.0% |
| CACAAGTCAAATTGCTCAAC+AGG | - | chr8_3:65158971-65158990 | None:intergenic | 40.0% | |
| TCAACATCATCATCCTGAAG+AGG | - | chr8_3:65159007-65159026 | None:intergenic | 40.0% | |
| AGCAAACTATTCTCGTCGTT+TGG | - | chr8_3:65159080-65159099 | None:intergenic | 40.0% | |
| TTTATCTGTGGGTTCAGTCA+AGG | + | chr8_3:65159170-65159189 | Msa1302580:CDS | 40.0% | |
| CCGCGTCCTTAATAGAAAAA+TGG | + | chr8_3:65159211-65159230 | Msa1302580:intron | 40.0% | |
| ATGAGCAACCTGCTGATAAA+TGG | + | chr8_3:65159238-65159257 | Msa1302580:intron | 40.0% | |
| CAATGTCACCATTTATCAGC+AGG | - | chr8_3:65159249-65159268 | None:intergenic | 40.0% | |
| TACCCTAAAACTTTAGGTGG+AGG | + | chr8_3:65159306-65159325 | Msa1302580:CDS | 40.0% | |
| AATTACACCTGAAGCTAAGC+GGG | + | chr8_3:65159377-65159396 | Msa1302580:CDS | 40.0% | |
| ! | GTAAAGCATTCCAGTTCAAC+TGG | + | chr8_3:65159686-65159705 | Msa1302580:intron | 40.0% |
| CATCGGTATACAATTGTCCT+TGG | + | chr8_3:65159740-65159759 | Msa1302580:intron | 40.0% | |
| TGCAAGGCTCATATCAAAAG+TGG | - | chr8_3:65159822-65159841 | None:intergenic | 40.0% | |
| AAAACAGTATTGTTCGAGGC+AGG | + | chr8_3:65160031-65160050 | Msa1302580:CDS | 40.0% | |
| ! | TGGTGTTAGTTGCGAGTTTA+AGG | + | chr8_3:65160084-65160103 | Msa1302580:CDS | 40.0% |
| CTCCTCGTTGTTTATTGAGT+GGG | - | chr8_3:65160214-65160233 | None:intergenic | 40.0% | |
| ! | AGCTAAAGCATCTTGAGTCT+TGG | + | chr8_3:65160232-65160251 | Msa1302580:CDS | 40.0% |
| !! | AGTAGTGTTTTTGAGAGACC+AGG | - | chr8_3:65160446-65160465 | None:intergenic | 40.0% |
| CTCTCAAAAACACTACTCCT+TGG | + | chr8_3:65160449-65160468 | Msa1302580:three_prime_UTR | 40.0% | |
| !!! | GAATCTTGTTTTCTCCGGCA+GGG | - | chr8_3:65156737-65156756 | None:intergenic | 45.0% |
| TTAGATAAACTTACGGCGGG+GGG | - | chr8_3:65156778-65156797 | None:intergenic | 45.0% | |
| GTTAGATAAACTTACGGCGG+GGG | - | chr8_3:65156779-65156798 | None:intergenic | 45.0% | |
| GGTTAGATAAACTTACGGCG+GGG | - | chr8_3:65156780-65156799 | None:intergenic | 45.0% | |
| GTTTATAACGTTCCAAGCCG+TGG | - | chr8_3:65156916-65156935 | None:intergenic | 45.0% | |
| TGTAACAATGGCACAGACAC+CGG | - | chr8_3:65157283-65157302 | None:intergenic | 45.0% | |
| ! | CCCTTCTGGGAATATTATCC+AGG | + | chr8_3:65157372-65157391 | Msa1302580:intron | 45.0% |
| CCCTGGATAATATTCCCAGA+AGG | - | chr8_3:65157376-65157395 | None:intergenic | 45.0% | |
| CATACGATATGAAAGCCGCA+AGG | - | chr8_3:65157679-65157698 | None:intergenic | 45.0% | |
| TGTGTGTAATGCGCTAAGGA+CGG | - | chr8_3:65157837-65157856 | None:intergenic | 45.0% | |
| AGCATGTGTGTAATGCGCTA+AGG | - | chr8_3:65157841-65157860 | None:intergenic | 45.0% | |
| ! | AGGAAGCATACCAACTACCA+AGG | - | chr8_3:65157914-65157933 | None:intergenic | 45.0% |
| CTAGACATAGGTGGAATAGG+AGG | - | chr8_3:65157954-65157973 | None:intergenic | 45.0% | |
| ! | TTTGGGTTACTAGAGGAGAC+TGG | + | chr8_3:65158423-65158442 | Msa1302580:intron | 45.0% |
| ATTTATCGTGGGTGTGGACA+TGG | + | chr8_3:65158488-65158507 | Msa1302580:intron | 45.0% | |
| ATAGACAAGGAAGTAGCTGC+TGG | + | chr8_3:65159128-65159147 | Msa1302580:CDS | 45.0% | |
| ! | TTTTGCAGGTGCCTTGACAT+TGG | + | chr8_3:65159269-65159288 | Msa1302580:intron | 45.0% |
| CAGAACACTAGCCAATGTCA+AGG | - | chr8_3:65159283-65159302 | None:intergenic | 45.0% | |
| ! | CGCCTCCACCTAAAGTTTTA+GGG | - | chr8_3:65159311-65159330 | None:intergenic | 45.0% |
| ATAAGTACCCGCTTAGCTTC+AGG | - | chr8_3:65159387-65159406 | None:intergenic | 45.0% | |
| GCAGAGGCAATCAGAGAAAA+TGG | - | chr8_3:65159490-65159509 | None:intergenic | 45.0% | |
| ! | GTCGGTGTACTTTTGATGGA+TGG | - | chr8_3:65159590-65159609 | None:intergenic | 45.0% |
| ! | TTGGGTCGGTGTACTTTTGA+TGG | - | chr8_3:65159594-65159613 | None:intergenic | 45.0% |
| TTTATTGAGTGGGCAAGACC+AGG | - | chr8_3:65160204-65160223 | None:intergenic | 45.0% | |
| TGCCCACTCAATAAACAACG+AGG | + | chr8_3:65160209-65160228 | Msa1302580:CDS | 45.0% | |
| GCTCCTCGTTGTTTATTGAG+TGG | - | chr8_3:65160215-65160234 | None:intergenic | 45.0% | |
| GAGAAAGTCATAGAGGTCAG+CGG | - | chr8_3:65160321-65160340 | None:intergenic | 45.0% | |
| !!! | CGAATCTTGTTTTCTCCGGC+AGG | - | chr8_3:65156738-65156757 | None:intergenic | 50.0% |
| GATTCGTTATACGCTCCGTC+AGG | + | chr8_3:65156752-65156771 | Msa1302580:five_prime_UTR | 50.0% | |
| ! | ACGTGTTTGGAATTCCGCCA+CGG | + | chr8_3:65156896-65156915 | Msa1302580:five_prime_UTR | 50.0% |
| TATAACGTTCCAAGCCGTGG+CGG | - | chr8_3:65156913-65156932 | None:intergenic | 50.0% | |
| ACAAAACTTCGAGCCGCCAT+TGG | - | chr8_3:65157059-65157078 | None:intergenic | 50.0% | |
| !!! | CGGCTCGAAGTTTTGTTCTG+TGG | + | chr8_3:65157063-65157082 | Msa1302580:CDS | 50.0% |
| GTTCTGTGGTTACACGGTCT+TGG | + | chr8_3:65157077-65157096 | Msa1302580:CDS | 50.0% | |
| ! | TTACACGGTCTTGGTGACTC+TGG | + | chr8_3:65157086-65157105 | Msa1302580:CDS | 50.0% |
| !! | GTCTTGATGGGTTCATTGGC+AGG | - | chr8_3:65157113-65157132 | None:intergenic | 50.0% |
| TGCATACAGTTGCAGGTGAC+CGG | - | chr8_3:65157197-65157216 | None:intergenic | 50.0% | |
| TCTGTTATGGCTCCCCTTCT+GGG | + | chr8_3:65157359-65157378 | Msa1302580:intron | 50.0% | |
| GTGTGTAATGCGCTAAGGAC+GGG | - | chr8_3:65157836-65157855 | None:intergenic | 50.0% | |
| GCGCATTACACACATGCTCA+TGG | + | chr8_3:65157843-65157862 | Msa1302580:intron | 50.0% | |
| CTGATTCTGAGTGAGGTCCT+TGG | + | chr8_3:65157894-65157913 | Msa1302580:intron | 50.0% | |
| ! | TGAGTGAGGTCCTTGGTAGT+TGG | + | chr8_3:65157901-65157920 | Msa1302580:intron | 50.0% |
| GCTAGACTTACAGCAGTCAC+AGG | - | chr8_3:65158161-65158180 | None:intergenic | 50.0% | |
| ATCTGTGGGTTCAGTCAAGG+AGG | + | chr8_3:65159173-65159192 | Msa1302580:CDS | 50.0% | |
| ! | GCGCCTCCACCTAAAGTTTT+AGG | - | chr8_3:65159312-65159331 | None:intergenic | 50.0% |
| !! | AGGCGCTGTTTTCAGTGGTT+GGG | + | chr8_3:65159326-65159345 | Msa1302580:CDS | 50.0% |
| GGTCGGCCTATTGTTGTCAT+CGG | + | chr8_3:65159723-65159742 | Msa1302580:intron | 50.0% | |
| ACACCCATACTATGGTCCCA+TGG | + | chr8_3:65159998-65160017 | Msa1302580:CDS | 50.0% | |
| CACCCATACTATGGTCCCAT+GGG | + | chr8_3:65159999-65160018 | Msa1302580:CDS | 50.0% | |
| AGCCCATGGGACCATAGTAT+GGG | - | chr8_3:65160004-65160023 | None:intergenic | 50.0% | |
| ! | TGTTTTGTCAGCCAGCCCAT+GGG | - | chr8_3:65160017-65160036 | None:intergenic | 50.0% |
| ! | TTTTCACCCGTGCTGTCGCA+CGG | - | chr8_3:65156677-65156696 | None:intergenic | 55.0% |
| TCAACCACCTTAGACCCTGC+CGG | + | chr8_3:65156720-65156739 | Msa1302580:five_prime_UTR | 55.0% | |
| ! | GTTTTCTCCGGCAGGGTCTA+AGG | - | chr8_3:65156730-65156749 | None:intergenic | 55.0% |
| ! | TTTGGAATTCCGCCACGGCT+TGG | + | chr8_3:65156901-65156920 | Msa1302580:five_prime_UTR | 55.0% |
| GATGCTGAGCTTCTCGTGTC+CGG | + | chr8_3:65157261-65157280 | Msa1302580:intron | 55.0% | |
| CTCTGTTATGGCTCCCCTTC+TGG | + | chr8_3:65157358-65157377 | Msa1302580:intron | 55.0% | |
| TAATGCGCTAAGGACGGGTC+TGG | - | chr8_3:65157831-65157850 | None:intergenic | 55.0% | |
| GGTTACTAGAGGAGACTGGC+AGG | + | chr8_3:65158427-65158446 | Msa1302580:intron | 55.0% | |
| !!! | GAGGCGCTGTTTTCAGTGGT+TGG | + | chr8_3:65159325-65159344 | Msa1302580:CDS | 55.0% |
| CAGCCCATGGGACCATAGTA+TGG | - | chr8_3:65160005-65160024 | None:intergenic | 55.0% | |
| CATACTATGGTCCCATGGGC+TGG | + | chr8_3:65160003-65160022 | Msa1302580:CDS | 55.0% | |
| ! | CTGTTTTGTCAGCCAGCCCA+TGG | - | chr8_3:65160018-65160037 | None:intergenic | 55.0% |
| TTTCACCCGTGCTGTCGCAC+GGG | - | chr8_3:65156676-65156695 | None:intergenic | 60.0% | |
| TTCTCCGGCAGGGTCTAAGG+TGG | - | chr8_3:65156727-65156746 | None:intergenic | 60.0% | |
| TCCTTCTGCTCCTCACGCTC+CGG | + | chr8_3:65157175-65157194 | Msa1302580:CDS | 60.0% | |
| AAGGACGGGTCTGGTGGAAC+TGG | - | chr8_3:65157822-65157841 | None:intergenic | 60.0% | |
| !!! | GGTGGAGGCGCTGTTTTCAG+TGG | + | chr8_3:65159321-65159340 | Msa1302580:CDS | 60.0% |
| GTGAGACCCGTGCGACAGCA+CGG | + | chr8_3:65156667-65156686 | Msa1302580:five_prime_UTR | 65.0% | |
| TGAGACCCGTGCGACAGCAC+GGG | + | chr8_3:65156668-65156687 | Msa1302580:five_prime_UTR | 65.0% | |
| ACCGGAGCGTGAGGAGCAGA+AGG | - | chr8_3:65157179-65157198 | None:intergenic | 65.0% | |
| TTGCAGGTGACCGGAGCGTG+AGG | - | chr8_3:65157188-65157207 | None:intergenic | 65.0% | |
| TGCGCTAAGGACGGGTCTGG+TGG | - | chr8_3:65157828-65157847 | None:intergenic | 65.0% | |
| ACTTACGGCGGGGGGCCTGA+CGG | - | chr8_3:65156770-65156789 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 65156583 | 65160522 | 65156583 | ID=Msa1302580;Name=Msa1302580 |
| chr8_3 | mRNA | 65156583 | 65160522 | 65156583 | ID=Msa1302580-mRNA-1;Parent=Msa1302580;Name=Msa1302580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=277|0.75|0.88|0.88|0.75|0.66|9|238|235 |
| chr8_3 | exon | 65156583 | 65156783 | 65156583 | ID=Msa1302580-mRNA-1:exon:19730;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65156894 | 65156955 | 65156894 | ID=Msa1302580-mRNA-1:exon:19731;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65157045 | 65157209 | 65157045 | ID=Msa1302580-mRNA-1:exon:19732;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65158117 | 65158169 | 65158117 | ID=Msa1302580-mRNA-1:exon:19733;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65158778 | 65158837 | 65158778 | ID=Msa1302580-mRNA-1:exon:19734;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65159071 | 65159194 | 65159071 | ID=Msa1302580-mRNA-1:exon:19735;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65159277 | 65159398 | 65159277 | ID=Msa1302580-mRNA-1:exon:19736;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65159998 | 65160105 | 65159998 | ID=Msa1302580-mRNA-1:exon:19737;Parent=Msa1302580-mRNA-1 |
| chr8_3 | exon | 65160195 | 65160522 | 65160195 | ID=Msa1302580-mRNA-1:exon:19738;Parent=Msa1302580-mRNA-1 |
| chr8_3 | five_prime_UTR | 65156583 | 65156783 | 65156583 | ID=Msa1302580-mRNA-1:five_prime_utr;Parent=Msa1302580-mRNA-1 |
| chr8_3 | five_prime_UTR | 65156894 | 65156955 | 65156894 | ID=Msa1302580-mRNA-1:five_prime_utr;Parent=Msa1302580-mRNA-1 |
| chr8_3 | five_prime_UTR | 65157045 | 65157058 | 65157045 | ID=Msa1302580-mRNA-1:five_prime_utr;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65157059 | 65157209 | 65157059 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65158117 | 65158169 | 65158117 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65158778 | 65158837 | 65158778 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65159071 | 65159194 | 65159071 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65159277 | 65159398 | 65159277 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65159998 | 65160105 | 65159998 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | CDS | 65160195 | 65160284 | 65160195 | ID=Msa1302580-mRNA-1:cds;Parent=Msa1302580-mRNA-1 |
| chr8_3 | three_prime_UTR | 65160285 | 65160522 | 65160285 | ID=Msa1302580-mRNA-1:three_prime_utr;Parent=Msa1302580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
