Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1243640 | XP_013445933.1 | 99.048 | 840 | 8 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1712 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1243640 | sp|O80739|POT12_ARATH | 73.759 | 846 | 195 | 9 | 3 | 840 | 1 | 827 | 0.0 | 1242 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1243640 | A0A072U2G0 | 99.048 | 840 | 8 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1712 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa1243640 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
Msa0648310 | Msa1243640 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
Msa0658240 | Msa1243640 | 0.805542 | 1.269273e-49 | -8.615850e-47 |
Msa0669320 | Msa1243640 | 0.803669 | 3.121995e-49 | -8.615850e-47 |
Msa0703050 | Msa1243640 | 0.815157 | 1.067423e-51 | -8.615850e-47 |
Msa0728630 | Msa1243640 | 0.835098 | 2.044679e-56 | -8.615850e-47 |
Msa0759690 | Msa1243640 | 0.831069 | 2.056868e-55 | -8.615850e-47 |
Msa0807470 | Msa1243640 | 0.810149 | 1.330273e-50 | -8.615850e-47 |
Msa0146260 | Msa1243640 | 0.800409 | 1.461067e-48 | -8.615850e-47 |
Msa0201500 | Msa1243640 | 0.847390 | 1.191795e-59 | -8.615850e-47 |
Msa0225680 | Msa1243640 | 0.809306 | 2.020037e-50 | -8.615850e-47 |
Msa0226890 | Msa1243640 | 0.815595 | 8.528268e-52 | -8.615850e-47 |
Msa1243640 | Msa1269480 | 0.808774 | 2.625199e-50 | -8.615850e-47 |
Msa1243640 | Msa1303990 | 0.815774 | 7.780573e-52 | -8.615850e-47 |
Msa1243640 | Msa1328710 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
Msa1243640 | Msa1361650 | 0.819201 | 1.315040e-52 | -8.615850e-47 |
Msa1243640 | Msa1423880 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
Msa0428590 | Msa1243640 | 0.817910 | 2.580055e-52 | -8.615850e-47 |
Msa0435400 | Msa1243640 | 0.801659 | 8.112274e-49 | -8.615850e-47 |
Msa1014990 | Msa1243640 | 0.810301 | 1.233663e-50 | -8.615850e-47 |
Msa1100050 | Msa1243640 | 0.809032 | 2.311657e-50 | -8.615850e-47 |
Msa0244110 | Msa1243640 | 0.850157 | 2.035439e-60 | -8.615850e-47 |
Msa0244160 | Msa1243640 | 0.857343 | 1.741792e-62 | -8.615850e-47 |
Msa0279700 | Msa1243640 | 0.800346 | 1.504406e-48 | -8.615850e-47 |
Msa0302000 | Msa1243640 | 0.808483 | 3.028670e-50 | -8.615850e-47 |
Msa1135470 | Msa1243640 | 0.810146 | 1.332770e-50 | -8.615850e-47 |
Msa0576880 | Msa1243640 | 0.822716 | 2.040862e-53 | -8.615850e-47 |
Msa0945110 | Msa1243640 | 0.817886 | 2.612713e-52 | -8.615850e-47 |
Msa0969520 | Msa1243640 | 0.803399 | 3.550838e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1243640 | MtrunA17_Chr8g0365001 | 99.048 | 840 | 8 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1712 |
Msa1243640 | MtrunA17_Chr2g0279131 | 55.699 | 851 | 356 | 6 | 7 | 840 | 3 | 849 | 0.0 | 946 |
Msa1243640 | MtrunA17_Chr5g0429991 | 56.265 | 830 | 348 | 6 | 21 | 840 | 25 | 849 | 0.0 | 921 |
Msa1243640 | MtrunA17_Chr4g0055471 | 45.761 | 802 | 392 | 9 | 61 | 840 | 35 | 815 | 0.0 | 732 |
Msa1243640 | MtrunA17_Chr2g0297291 | 47.765 | 783 | 377 | 10 | 71 | 840 | 26 | 789 | 0.0 | 720 |
Msa1243640 | MtrunA17_Chr6g0461871 | 46.912 | 761 | 388 | 7 | 94 | 840 | 27 | 785 | 0.0 | 717 |
Msa1243640 | MtrunA17_Chr7g0268981 | 45.711 | 781 | 378 | 7 | 59 | 838 | 36 | 771 | 0.0 | 715 |
Msa1243640 | MtrunA17_Chr4g0052401 | 46.547 | 782 | 386 | 10 | 71 | 840 | 26 | 787 | 0.0 | 689 |
Msa1243640 | MtrunA17_Chr5g0430731 | 44.751 | 762 | 397 | 6 | 81 | 840 | 15 | 754 | 0.0 | 687 |
Msa1243640 | MtrunA17_Chr6g0451081 | 45.736 | 774 | 393 | 9 | 84 | 840 | 13 | 776 | 0.0 | 684 |
Msa1243640 | MtrunA17_Chr8g0380281 | 44.430 | 781 | 423 | 4 | 64 | 840 | 9 | 782 | 0.0 | 678 |
Msa1243640 | MtrunA17_Chr3g0128831 | 45.013 | 782 | 395 | 12 | 89 | 840 | 18 | 794 | 0.0 | 665 |
Msa1243640 | MtrunA17_Chr8g0387661 | 42.857 | 777 | 401 | 8 | 94 | 840 | 29 | 792 | 0.0 | 598 |
Msa1243640 | MtrunA17_Chr8g0393241 | 35.013 | 794 | 476 | 10 | 77 | 836 | 8 | 795 | 2.92e-171 | 515 |
Msa1243640 | MtrunA17_Chr8g0375411 | 36.842 | 760 | 400 | 12 | 80 | 838 | 16 | 696 | 3.41e-168 | 504 |
Msa1243640 | MtrunA17_Chr8g0344561 | 42.642 | 598 | 305 | 7 | 243 | 840 | 13 | 572 | 6.92e-168 | 498 |
Msa1243640 | MtrunA17_Chr8g0365031 | 49.260 | 473 | 228 | 3 | 263 | 726 | 40 | 509 | 1.26e-158 | 474 |
Msa1243640 | MtrunA17_Chr2g0297311 | 53.571 | 392 | 176 | 3 | 100 | 489 | 58 | 445 | 1.66e-144 | 434 |
Msa1243640 | MtrunA17_Chr5g0430571 | 39.206 | 579 | 289 | 9 | 263 | 840 | 19 | 535 | 3.88e-141 | 428 |
Msa1243640 | MtrunA17_Chr5g0413721 | 50.115 | 433 | 205 | 5 | 73 | 494 | 1 | 433 | 9.60e-139 | 433 |
Msa1243640 | MtrunA17_Chr5g0413721 | 36.216 | 370 | 205 | 4 | 488 | 840 | 516 | 871 | 9.21e-69 | 244 |
Msa1243640 | MtrunA17_Chr8g0344591 | 44.000 | 450 | 228 | 4 | 243 | 692 | 13 | 438 | 2.23e-134 | 408 |
Msa1243640 | MtrunA17_Chr2g0297321 | 40.997 | 361 | 188 | 5 | 489 | 840 | 3 | 347 | 6.06e-85 | 275 |
Msa1243640 | MtrunA17_Chr8g0365041 | 45.339 | 236 | 111 | 6 | 21 | 252 | 2 | 223 | 2.04e-58 | 199 |
Msa1243640 | MtrunA17_Chr5g0413751 | 43.750 | 176 | 99 | 0 | 489 | 664 | 133 | 308 | 1.21e-51 | 183 |
Msa1243640 | MtrunA17_Chr5g0413751 | 39.716 | 141 | 69 | 4 | 106 | 239 | 7 | 138 | 4.29e-19 | 89.0 |
Msa1243640 | MtrunA17_Chr8g0344581 | 56.209 | 153 | 62 | 2 | 91 | 243 | 3 | 150 | 3.05e-51 | 176 |
Msa1243640 | MtrunA17_Chr8g0344551 | 56.209 | 153 | 62 | 2 | 91 | 243 | 3 | 150 | 4.54e-51 | 176 |
Msa1243640 | MtrunA17_Chr5g0430551 | 48.701 | 154 | 76 | 3 | 92 | 243 | 11 | 163 | 8.84e-41 | 148 |
Msa1243640 | MtrunA17_Chr1g0159401 | 49.167 | 120 | 54 | 2 | 241 | 360 | 12 | 124 | 7.29e-27 | 107 |
Msa1243640 | MtrunA17_Chr6g0467721 | 33.951 | 162 | 88 | 4 | 246 | 398 | 8 | 159 | 1.35e-13 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1243640 | AT1G60160.1 | 73.759 | 846 | 195 | 9 | 3 | 840 | 1 | 827 | 0.0 | 1242 |
Msa1243640 | AT5G09400.1 | 56.628 | 860 | 337 | 8 | 8 | 840 | 8 | 858 | 0.0 | 936 |
Msa1243640 | AT4G33530.1 | 55.900 | 839 | 355 | 5 | 14 | 840 | 20 | 855 | 0.0 | 920 |
Msa1243640 | AT4G13420.1 | 45.366 | 820 | 404 | 11 | 23 | 838 | 4 | 783 | 0.0 | 732 |
Msa1243640 | AT4G33530.2 | 58.509 | 617 | 249 | 4 | 228 | 840 | 14 | 627 | 0.0 | 729 |
Msa1243640 | AT2G35060.4 | 47.248 | 745 | 371 | 6 | 100 | 840 | 66 | 792 | 0.0 | 702 |
Msa1243640 | AT2G35060.1 | 47.248 | 745 | 371 | 6 | 100 | 840 | 66 | 792 | 0.0 | 702 |
Msa1243640 | AT2G35060.3 | 47.248 | 745 | 371 | 6 | 100 | 840 | 66 | 792 | 0.0 | 702 |
Msa1243640 | AT2G35060.2 | 47.185 | 746 | 371 | 7 | 100 | 840 | 66 | 793 | 0.0 | 698 |
Msa1243640 | AT1G31120.1 | 48.183 | 743 | 372 | 6 | 100 | 840 | 65 | 796 | 0.0 | 697 |
Msa1243640 | AT5G14880.1 | 45.211 | 783 | 389 | 11 | 84 | 840 | 13 | 781 | 0.0 | 674 |
Msa1243640 | AT2G40540.1 | 44.515 | 793 | 399 | 8 | 80 | 840 | 11 | 794 | 0.0 | 674 |
Msa1243640 | AT2G40540.5 | 44.515 | 793 | 399 | 8 | 80 | 840 | 11 | 794 | 0.0 | 674 |
Msa1243640 | AT2G40540.4 | 44.515 | 793 | 399 | 8 | 80 | 840 | 11 | 794 | 0.0 | 674 |
Msa1243640 | AT2G40540.2 | 44.515 | 793 | 399 | 8 | 80 | 840 | 11 | 794 | 0.0 | 674 |
Msa1243640 | AT2G40540.3 | 44.515 | 793 | 399 | 8 | 80 | 840 | 11 | 794 | 0.0 | 674 |
Msa1243640 | AT1G70300.1 | 44.162 | 788 | 414 | 8 | 73 | 840 | 1 | 782 | 0.0 | 661 |
Msa1243640 | AT4G19960.2 | 46.996 | 749 | 390 | 4 | 96 | 840 | 62 | 807 | 0.0 | 660 |
Msa1243640 | AT2G30070.1 | 43.512 | 763 | 365 | 7 | 80 | 840 | 14 | 712 | 0.0 | 654 |
Msa1243640 | AT3G02050.1 | 44.588 | 776 | 403 | 7 | 86 | 840 | 20 | 789 | 0.0 | 649 |
Msa1243640 | AT4G19960.1 | 46.013 | 765 | 390 | 5 | 96 | 840 | 62 | 823 | 0.0 | 649 |
Msa1243640 | AT4G19960.3 | 45.419 | 775 | 390 | 5 | 96 | 840 | 62 | 833 | 0.0 | 645 |
Msa1243640 | AT4G23640.1 | 44.675 | 770 | 391 | 7 | 94 | 838 | 14 | 773 | 0.0 | 637 |
Msa1243640 | AT2G30070.2 | 41.527 | 655 | 319 | 5 | 186 | 840 | 2 | 592 | 0.0 | 533 |
Msa1243640 | AT4G19960.4 | 45.189 | 582 | 314 | 2 | 263 | 840 | 6 | 586 | 1.37e-172 | 511 |
Find 179 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGAACTTCTATGATTAT+TGG | 0.164640 | 8_2:+30132701 | Msa1243640:CDS |
TGCATTTGAGCAACTTCTTA+TGG | 0.203702 | 8_2:+30136238 | Msa1243640:CDS |
CTTGATCTTGGTTCCAATCT+TGG | 0.206414 | 8_2:+30135960 | Msa1243640:CDS |
TTTACATACCTGTTATTAAT+TGG | 0.215943 | 8_2:+30135380 | Msa1243640:CDS |
ATGTCTCCTCCTTGCTTATA+TGG | 0.219614 | 8_2:+30134843 | Msa1243640:CDS |
AGTGGTTAGTATATCTATTT+TGG | 0.243547 | 8_2:+30134210 | Msa1243640:CDS |
AAGCTCTTCTGCTCCATTAC+TGG | 0.258461 | 8_2:-30136378 | None:intergenic |
CTTAGAGAAGCAATGGATTC+AGG | 0.266535 | 8_2:+30136536 | Msa1243640:CDS |
TATTATTTCTTCAAGAATAA+TGG | 0.267048 | 8_2:+30134397 | Msa1243640:CDS |
CGCTGTACTCGCTGATTTGT+AGG | 0.268312 | 8_2:+30132516 | Msa1243640:CDS |
GGTCTACAGGATCAAATAAA+TGG | 0.272312 | 8_2:+30133293 | Msa1243640:CDS |
TTTAAAGCCCTTTCGAGTTC+TGG | 0.273431 | 8_2:-30132617 | None:intergenic |
GACTTGTTAAGAAACCTAAA+AGG | 0.278051 | 8_2:+30130822 | Msa1243640:CDS |
TTGTTAGTGTTGGTTCTTCT+TGG | 0.278778 | 8_2:+30132683 | Msa1243640:CDS |
CAGACTCTTGGTGTTGTATA+TGG | 0.289384 | 8_2:+30132232 | Msa1243640:CDS |
GTGATGTATACGTGGAACTA+TGG | 0.302434 | 8_2:+30135882 | Msa1243640:CDS |
GTTCTCAAAGCTAATGATAA+TGG | 0.313250 | 8_2:+30132397 | Msa1243640:CDS |
GAAGCAATGTTTGCAGATCT+TGG | 0.314553 | 8_2:+30134666 | Msa1243640:CDS |
TTGATCCTGTAGACCACTTA+TGG | 0.326090 | 8_2:-30133285 | None:intergenic |
CGTTAAGCAATCAATGGCTT+TGG | 0.328371 | 8_2:+30135303 | Msa1243640:CDS |
TGGCTTTGGGATGCTTCCCC+AGG | 0.332579 | 8_2:+30135317 | Msa1243640:CDS |
AGTGAGTCTAGGTGGGTTGA+TGG | 0.339971 | 8_2:+30130716 | Msa1243640:CDS |
GAGAAGGGTATGGTTCAATT+AGG | 0.342192 | 8_2:+30130795 | Msa1243640:CDS |
TAGAAGGAACTGCAGGAAAA+TGG | 0.349309 | 8_2:-30136042 | None:intergenic |
ACATCGTCATCTGAGTTAAT+AGG | 0.355218 | 8_2:-30132307 | None:intergenic |
TACTCTTACTGTTCCAAGAT+TGG | 0.357857 | 8_2:-30135973 | None:intergenic |
ATACATCACGGAGAGGAAAA+AGG | 0.362860 | 8_2:-30135868 | None:intergenic |
ATTCTAACTCCAGCGATATC+AGG | 0.368280 | 8_2:+30132731 | Msa1243640:CDS |
CAGGATCAAATAAATGGATT+TGG | 0.372956 | 8_2:+30133299 | Msa1243640:CDS |
GGTTGTGTTCTGTGCATTAC+AGG | 0.377456 | 8_2:+30134445 | Msa1243640:CDS |
GTATTCTTCAAATCTGTTCC+AGG | 0.388671 | 8_2:+30134910 | Msa1243640:CDS |
TTATATAGCAATCCTATTCC+TGG | 0.391926 | 8_2:-30135996 | None:intergenic |
TTGCAATATCTGTAGTGCTT+TGG | 0.394561 | 8_2:-30135441 | None:intergenic |
ATCAGAAACCAATTAATAAC+AGG | 0.399243 | 8_2:-30135388 | None:intergenic |
ATGGACTTAATGCTTGATCT+TGG | 0.400243 | 8_2:+30135948 | Msa1243640:CDS |
GCATTAGCATTTCAGACTCT+TGG | 0.401893 | 8_2:+30132220 | Msa1243640:CDS |
AACTCAGATGACGATGTCTT+GGG | 0.403908 | 8_2:+30132313 | Msa1243640:CDS |
TGTCTCCTCCTTGCTTATAT+GGG | 0.404323 | 8_2:+30134844 | Msa1243640:CDS |
GAAGAGCTGGAAGGCTTAGA+AGG | 0.411739 | 8_2:-30136058 | None:intergenic |
GGTCAGAATTTAGAAGAAAC+AGG | 0.416226 | 8_2:+30136419 | Msa1243640:CDS |
CATCCCCACTTGAATGATAT+TGG | 0.418494 | 8_2:-30136699 | None:intergenic |
AAGAAATAATAGATATATGC+TGG | 0.419596 | 8_2:-30134385 | None:intergenic |
ATCTCCATGTCCAAGCAAAT+AGG | 0.423110 | 8_2:-30136564 | None:intergenic |
ATCTGTAGTGCTTTGGAAGA+TGG | 0.427886 | 8_2:-30135434 | None:intergenic |
TCTTGAGGAACCACAGGAAT+CGG | 0.428798 | 8_2:-30136116 | None:intergenic |
TGAATCAGGATCTTTCCCTT+TGG | 0.433422 | 8_2:+30132188 | Msa1243640:intron |
CTTTCTTCTTGAGGAACCAC+AGG | 0.434369 | 8_2:-30136122 | None:intergenic |
ATTTAGTTGAAGAATGAAGT+TGG | 0.436369 | 8_2:+30130640 | Msa1243640:exon |
GTTAAGCAATCAATGGCTTT+GGG | 0.437944 | 8_2:+30135304 | Msa1243640:CDS |
TCAAGTGGGGATGACATATA+TGG | 0.439510 | 8_2:+30136709 | Msa1243640:CDS |
TAACTCAGATGACGATGTCT+TGG | 0.441627 | 8_2:+30132312 | Msa1243640:CDS |
TCATCAGCTTGTTGGCGATT+CGG | 0.441990 | 8_2:-30132560 | None:intergenic |
TCAGGATTCACCTATTTGCT+TGG | 0.448637 | 8_2:+30136554 | Msa1243640:CDS |
AGATTTGTTCATCAGCTTGT+TGG | 0.449742 | 8_2:-30132568 | None:intergenic |
ACAGTAAGAGTACCAGGAAT+AGG | 0.451647 | 8_2:+30135984 | Msa1243640:CDS |
GAAGGAAGTGTGAGGTTGTT+GGG | 0.455074 | 8_2:+30130674 | Msa1243640:CDS |
ACAGATATTGCAAATGCATA+TGG | 0.455341 | 8_2:+30135451 | Msa1243640:CDS |
GTCTGCCATAAGTGGTCTAC+AGG | 0.455828 | 8_2:+30133280 | Msa1243640:CDS |
CGGAACATATGATAATCTTT+CGG | 0.459350 | 8_2:-30136167 | None:intergenic |
AGCATTCAACAGTTCGGTAC+TGG | 0.463934 | 8_2:+30134250 | Msa1243640:CDS |
GATTCACAGACCTGTATTGC+TGG | 0.464470 | 8_2:-30134702 | None:intergenic |
GTAATGGAGCAGAAGAGCTT+AGG | 0.465808 | 8_2:+30136381 | Msa1243640:CDS |
TTCATGCGTTAAGCAATCAA+TGG | 0.467109 | 8_2:+30135297 | Msa1243640:CDS |
TTGATGGAAGTGAAGTTGAT+TGG | 0.468335 | 8_2:+30130732 | Msa1243640:CDS |
GGTATGAATTATCTTGAGCC+TGG | 0.469794 | 8_2:-30135335 | None:intergenic |
GTGGGAGTAGTGAGTCTAGG+TGG | 0.470544 | 8_2:+30130708 | Msa1243640:CDS |
AAATTCTGACCATGCAATAG+TGG | 0.471151 | 8_2:-30136407 | None:intergenic |
CAAATAAATGGATTTGGTAC+AGG | 0.484132 | 8_2:+30133305 | Msa1243640:CDS |
TGCTGAAGTTGGTGTGATGA+TGG | 0.484656 | 8_2:+30135683 | Msa1243640:CDS |
TTCAGCTCTTAGAGAAGCAA+TGG | 0.484711 | 8_2:+30136529 | Msa1243640:CDS |
AATCTTTCGGACATACTCTT+CGG | 0.485567 | 8_2:-30136154 | None:intergenic |
AGAAGGAAGTGTGAGGTTGT+TGG | 0.491219 | 8_2:+30130673 | Msa1243640:CDS |
TTCACCTATTTGCTTGGACA+TGG | 0.492212 | 8_2:+30136560 | Msa1243640:CDS |
ATATGTTCCGCTGTGTTGCT+AGG | 0.493459 | 8_2:+30136180 | Msa1243640:CDS |
CTTGGAACAGTAAGAGTACC+AGG | 0.493863 | 8_2:+30135978 | Msa1243640:CDS |
TGATGGAAGTGAAGTTGATT+GGG | 0.493878 | 8_2:+30130733 | Msa1243640:CDS |
TTCCGCTGTGTTGCTAGGTA+CGG | 0.495566 | 8_2:+30136185 | Msa1243640:CDS |
TTGTTCAGCATTCAACAGTT+CGG | 0.497318 | 8_2:+30134244 | Msa1243640:CDS |
TCTGATCTTGCAGCCAGTAA+TGG | 0.500060 | 8_2:+30136365 | Msa1243640:CDS |
AGAAGCTGCGTTGGAGTTGG+AGG | 0.504460 | 8_2:+30136295 | Msa1243640:CDS |
TGGGAGTAGTGAGTCTAGGT+GGG | 0.507217 | 8_2:+30130709 | Msa1243640:CDS |
AGCAGATATCATTGCTTGAC+TGG | 0.510606 | 8_2:-30135269 | None:intergenic |
AAGAACCATAAAGCAAGTAC+AGG | 0.514695 | 8_2:-30134295 | None:intergenic |
GTCTTGAGAAATTCTTGAGA+AGG | 0.523407 | 8_2:+30136264 | Msa1243640:CDS |
CATGGAAGTGATGGTAGAGA+AGG | 0.524379 | 8_2:+30130779 | Msa1243640:CDS |
CAGTTCGGTACTGGCAAAGT+GGG | 0.525126 | 8_2:+30134259 | Msa1243640:CDS |
GTATGAATTATCTTGAGCCT+GGG | 0.527026 | 8_2:-30135334 | None:intergenic |
TTGTTGGGAAGTAGCAGTGG+TGG | 0.527762 | 8_2:+30130689 | Msa1243640:CDS |
ATTGCAGGCATTGCTGAAGT+TGG | 0.529205 | 8_2:+30135672 | Msa1243640:intron |
AAGTTGGATAAGATTGAAGA+AGG | 0.529662 | 8_2:+30130656 | Msa1243640:CDS |
GTTAGAAGCTGCGTTGGAGT+TGG | 0.530443 | 8_2:+30136292 | Msa1243640:CDS |
ACTTGTTAAGAAACCTAAAA+GGG | 0.534661 | 8_2:+30130823 | Msa1243640:CDS |
TGATGTATACGTGGAACTAT+GGG | 0.537017 | 8_2:+30135883 | Msa1243640:CDS |
TAATGCAATGGTAGGCCAAA+GGG | 0.540420 | 8_2:-30132203 | None:intergenic |
TCTTGAGAAATTCTTGAGAA+GGG | 0.540745 | 8_2:+30136265 | Msa1243640:CDS |
GGAAGCGTTAGAAGCTGCGT+TGG | 0.543749 | 8_2:+30136286 | Msa1243640:CDS |
ACTACAATGGAATGAAGAGC+TGG | 0.545833 | 8_2:-30136071 | None:intergenic |
GAAAGCTCGTATTCTAGACT+AGG | 0.551419 | 8_2:-30136509 | None:intergenic |
TGTTGGGAAGTAGCAGTGGT+GGG | 0.554534 | 8_2:+30130690 | Msa1243640:CDS |
GTGGTGGGAGTAGTGAGTCT+AGG | 0.556201 | 8_2:+30130705 | Msa1243640:CDS |
ACAGATTGCTTTCACTTGTG+TGG | 0.556972 | 8_2:+30134813 | Msa1243640:intron |
TCCTACGCCAGAACTCGAAA+GGG | 0.560023 | 8_2:+30132610 | Msa1243640:CDS |
GTGTTTGTTATAGCTACACT+TGG | 0.562933 | 8_2:+30135235 | Msa1243640:CDS |
TTCCTACGCCAGAACTCGAA+AGG | 0.565505 | 8_2:+30132609 | Msa1243640:CDS |
GAAGGCTTAGAAGGAACTGC+AGG | 0.569528 | 8_2:-30136049 | None:intergenic |
GATCCTCCATGGTCTCATCA+TGG | 0.569540 | 8_2:+30130761 | Msa1243640:CDS |
GGTACGGTTACAAAGACGTT+CGG | 0.573020 | 8_2:+30136201 | Msa1243640:CDS |
GAAGCTATGGAGATTGCTGC+TGG | 0.576180 | 8_2:+30130863 | Msa1243640:CDS |
AAAGCTAATGATAATGGAGA+AGG | 0.577182 | 8_2:+30132403 | Msa1243640:CDS |
AAAAGTGCATGGTCAGCTCT+TGG | 0.578795 | 8_2:+30134421 | Msa1243640:CDS |
TGGTCTCATCATGGAAGTGA+TGG | 0.581437 | 8_2:+30130770 | Msa1243640:CDS |
AGAAATAATAGATATATGCT+GGG | 0.582392 | 8_2:-30134384 | None:intergenic |
TAATTATCTGAAAGAATGCA+TGG | 0.582518 | 8_2:-30136753 | None:intergenic |
AGAATAATGGCAAAAGTGCA+TGG | 0.588583 | 8_2:+30134410 | Msa1243640:CDS |
GCAGTGATGTCTGCCATAAG+TGG | 0.591102 | 8_2:+30133272 | Msa1243640:intron |
ACTTCTATGATTATTGGTGA+TGG | 0.591335 | 8_2:+30132707 | Msa1243640:CDS |
AGTGATGGTAGAGAAGGGTA+TGG | 0.592180 | 8_2:+30130785 | Msa1243640:CDS |
TAAGAAGTTGCTCAAATGCA+TGG | 0.592547 | 8_2:-30136235 | None:intergenic |
TGGTGTTGTATATGGTGACA+TGG | 0.593357 | 8_2:+30132240 | Msa1243640:CDS |
CACACCAATATCATTCAAGT+GGG | 0.594275 | 8_2:+30136695 | Msa1243640:CDS |
ATATAAGCAAGGAGGAGACA+TGG | 0.594374 | 8_2:-30134841 | None:intergenic |
CTGAGAAAGAATTGCAGAGG+AGG | 0.594904 | 8_2:+30136650 | Msa1243640:CDS |
TCCTCTCCGTGATGTATACG+TGG | 0.597555 | 8_2:+30135874 | Msa1243640:CDS |
ACTCAGATGACGATGTCTTG+GGG | 0.599900 | 8_2:+30132314 | Msa1243640:CDS |
CTATATAATGAGCTTGTCCA+AGG | 0.600793 | 8_2:+30136011 | Msa1243640:CDS |
CTAATGCAATGGTAGGCCAA+AGG | 0.603868 | 8_2:-30132204 | None:intergenic |
AGGTTGTTGGGAAGTAGCAG+TGG | 0.604155 | 8_2:+30130686 | Msa1243640:CDS |
TGAAATGCTAATGCAATGGT+AGG | 0.605154 | 8_2:-30132211 | None:intergenic |
ACAGTTCGGTACTGGCAAAG+TGG | 0.607010 | 8_2:+30134258 | Msa1243640:CDS |
TGATGGTGTGGACACCGCCT+CGG | 0.607502 | 8_2:+30136328 | Msa1243640:CDS |
GGAACTTCTACCTCACATGA+AGG | 0.607974 | 8_2:+30136440 | Msa1243640:CDS |
GGAAAATGGAGGGAACACCT+TGG | 0.608538 | 8_2:-30136028 | None:intergenic |
GAAGCTGCGTTGGAGTTGGA+GGG | 0.610650 | 8_2:+30136296 | Msa1243640:CDS |
GGAGTGTCTTGAAGTACCGA+AGG | 0.610764 | 8_2:+30135904 | Msa1243640:CDS |
TGGTCATGATCAACACTCCA+AGG | 0.610783 | 8_2:+30130883 | Msa1243640:CDS |
CTTAGGATTCCACTATTGCA+TGG | 0.610989 | 8_2:+30136398 | Msa1243640:CDS |
TCACACCAATATCATTCAAG+TGG | 0.616744 | 8_2:+30136694 | Msa1243640:CDS |
CTCAGATGACGATGTCTTGG+GGG | 0.619347 | 8_2:+30132315 | Msa1243640:CDS |
ATGGAAGTGATGGTAGAGAA+GGG | 0.619739 | 8_2:+30130780 | Msa1243640:CDS |
AGTCTGAAATGCTAATGCAA+TGG | 0.620172 | 8_2:-30132215 | None:intergenic |
TAAATATGTTCCGATTCCTG+TGG | 0.623832 | 8_2:+30136106 | Msa1243640:CDS |
AGGAACTGCAGGAAAATGGA+GGG | 0.625809 | 8_2:-30136038 | None:intergenic |
CAATGGAATGAAGAGCTGGA+AGG | 0.626473 | 8_2:-30136067 | None:intergenic |
ATTGGGATGAAGATCCTCCA+TGG | 0.626569 | 8_2:+30130750 | Msa1243640:CDS |
TTGGAGGGTAACTTAACTGA+TGG | 0.627012 | 8_2:+30136311 | Msa1243640:CDS |
AAGGAACTGCAGGAAAATGG+AGG | 0.628157 | 8_2:-30136039 | None:intergenic |
AGAACCATAAAGCAAGTACA+GGG | 0.629862 | 8_2:-30134294 | None:intergenic |
GCTTACGTACCTGATATCGC+TGG | 0.631376 | 8_2:-30132740 | None:intergenic |
CAGCTTGGCCCATATAAGCA+AGG | 0.633487 | 8_2:-30134852 | None:intergenic |
TATGAATTATCTTGAGCCTG+GGG | 0.640497 | 8_2:-30135333 | None:intergenic |
AGTGTAGCTATAACAAACAC+TGG | 0.643046 | 8_2:-30135232 | None:intergenic |
GGGTAACTTAACTGATGGTG+TGG | 0.643249 | 8_2:+30136316 | Msa1243640:CDS |
TTTCTGAGAAAGAATTGCAG+AGG | 0.648512 | 8_2:+30136647 | Msa1243640:CDS |
CGGTTACAAAGACGTTCGGA+AGG | 0.649414 | 8_2:+30136205 | Msa1243640:CDS |
AAATAAAGGAGACTTTGGAA+AGG | 0.655391 | 8_2:+30132639 | Msa1243640:CDS |
TCACTTCCATGATGAGACCA+TGG | 0.659119 | 8_2:-30130767 | None:intergenic |
TGTTGACGCACCTTCATGTG+AGG | 0.659249 | 8_2:-30136450 | None:intergenic |
TCCGACGACATATAACTCGA+TGG | 0.660897 | 8_2:-30136479 | None:intergenic |
AATACACTTGAATAAGACGC+AGG | 0.662229 | 8_2:-30134892 | None:intergenic |
AGTGCATGGTCAGCTCTTGG+TGG | 0.663014 | 8_2:+30134424 | Msa1243640:CDS |
ACCATCGAGTTATATGTCGT+CGG | 0.666017 | 8_2:+30136478 | Msa1243640:CDS |
AAGCATTACTAGTGTCACCA+AGG | 0.672487 | 8_2:-30135715 | None:intergenic |
GGTGTTGTATATGGTGACAT+GGG | 0.689848 | 8_2:+30132241 | Msa1243640:CDS |
GAGTGTCTTGAAGTACCGAA+GGG | 0.690651 | 8_2:+30135905 | Msa1243640:CDS |
ATTTCTTGTATCCACCGAGG+CGG | 0.700960 | 8_2:-30136342 | None:intergenic |
TGGTGTGGACACCGCCTCGG+TGG | 0.702237 | 8_2:+30136331 | Msa1243640:CDS |
ATAGTTCCACGTATACATCA+CGG | 0.707884 | 8_2:-30135880 | None:intergenic |
CATTACTAGTGTCACCAAGG+TGG | 0.712618 | 8_2:-30135712 | None:intergenic |
GATGATGGTTAGCACCACCT+TGG | 0.715380 | 8_2:+30135698 | Msa1243640:CDS |
CTTGGCCCATATAAGCAAGG+AGG | 0.723455 | 8_2:-30134849 | None:intergenic |
TCCACGTATACATCACGGAG+AGG | 0.724985 | 8_2:-30135875 | None:intergenic |
AGATTGAAGAAGGAAGTGTG+AGG | 0.728871 | 8_2:+30130666 | Msa1243640:CDS |
ACACCAATATCATTCAAGTG+GGG | 0.735184 | 8_2:+30136696 | Msa1243640:CDS |
GAACCATAAAGCAAGTACAG+GGG | 0.743969 | 8_2:-30134293 | None:intergenic |
AGAATTTCTTGTATCCACCG+AGG | 0.747791 | 8_2:-30136345 | None:intergenic |
CTTCCATGATGAGACCATGG+AGG | 0.760877 | 8_2:-30130764 | None:intergenic |
ACTTGAATGATATTGGTGTG+AGG | 0.767010 | 8_2:-30136692 | None:intergenic |
AACCGTACCTAGCAACACAG+CGG | 0.771805 | 8_2:-30136187 | None:intergenic |
GAATGCTGAACAAAGCCACG+AGG | 0.773167 | 8_2:-30134234 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTCAATTATAAATAAAAA+AGG | + | chr8_2:30131526-30131545 | Msa1243640:intron | 10.0% |
!! | AGTCAATTATAAATAAAAAA+GGG | + | chr8_2:30131527-30131546 | Msa1243640:intron | 10.0% |
!! | AATTATATAAAATGATACCT+TGG | - | chr8_2:30130903-30130922 | None:intergenic | 15.0% |
!! | ATAAATAAAAAAGGGAATAT+AGG | + | chr8_2:30131535-30131554 | Msa1243640:intron | 15.0% |
!!! | ATAAAAACATATTTTGCTAA+TGG | - | chr8_2:30132376-30132395 | None:intergenic | 15.0% |
!! | ATTTATAATATAAGCAAAGA+TGG | + | chr8_2:30133392-30133411 | Msa1243640:intron | 15.0% |
!!! | CAAATTTTAAGATAATATCT+GGG | + | chr8_2:30133618-30133637 | Msa1243640:intron | 15.0% |
!!! | TATTATTTCTTCAAGAATAA+TGG | + | chr8_2:30134397-30134416 | Msa1243640:CDS | 15.0% |
!!! | GTTATGTATATTAATCATTT+TGG | + | chr8_2:30135165-30135184 | Msa1243640:intron | 15.0% |
!!! | TATTCCTTTTTTTTTCTTTA+TGG | + | chr8_2:30135505-30135524 | Msa1243640:intron | 15.0% |
!!! | ATCATAGATTATTCATGTTT+TGG | + | chr8_2:30130974-30130993 | Msa1243640:intron | 20.0% |
!! | TTATGAAAATAAGCTGAAAA+AGG | - | chr8_2:30131173-30131192 | None:intergenic | 20.0% |
!! | ATTGAAAGATTTCTGTTTAA+TGG | + | chr8_2:30131575-30131594 | Msa1243640:intron | 20.0% |
!! | TATATGCAGTGTTAAATAAA+AGG | - | chr8_2:30132129-30132148 | None:intergenic | 20.0% |
!! | TTTAAAAATAAAGGAGACTT+TGG | + | chr8_2:30132634-30132653 | Msa1243640:CDS | 20.0% |
!! | CCAGATATTATCTTAAAATT+TGG | - | chr8_2:30133620-30133639 | None:intergenic | 20.0% |
!!! | CCAAATTTTAAGATAATATC+TGG | + | chr8_2:30133617-30133636 | Msa1243640:intron | 20.0% |
!!! | AAAAAGTGTTTATAAGTCAA+AGG | + | chr8_2:30133759-30133778 | Msa1243640:intron | 20.0% |
!!! | CTATCAACTATTTTGTAATT+CGG | + | chr8_2:30134079-30134098 | Msa1243640:intron | 20.0% |
!! | TTTAGTTATGTTACAAACTA+TGG | + | chr8_2:30134120-30134139 | Msa1243640:intron | 20.0% |
!! | AGAAATAATAGATATATGCT+GGG | - | chr8_2:30134387-30134406 | None:intergenic | 20.0% |
!! | AAGAAATAATAGATATATGC+TGG | - | chr8_2:30134388-30134407 | None:intergenic | 20.0% |
!! | GCATTATAAATAACACATTT+CGG | - | chr8_2:30134575-30134594 | None:intergenic | 20.0% |
!! | TAAATAAAAACTACATCAAG+AGG | + | chr8_2:30135137-30135156 | Msa1243640:intron | 20.0% |
!! | TTTACATACCTGTTATTAAT+TGG | + | chr8_2:30135380-30135399 | Msa1243640:CDS | 20.0% |
!! | AGAACCATAAAGAAAAAAAA+AGG | - | chr8_2:30135512-30135531 | None:intergenic | 20.0% |
!!! | TTTTTTTCTTTATGGTTCTA+AGG | + | chr8_2:30135513-30135532 | Msa1243640:intron | 20.0% |
!! | AGTAAGAGAAAAAATTTCAA+TGG | + | chr8_2:30135929-30135948 | Msa1243640:CDS | 20.0% |
!! | AATAAAAATCTTTCTTCTTG+AGG | - | chr8_2:30136134-30136153 | None:intergenic | 20.0% |
!!! | CATTTTTTCACAGAAACAAA+GGG | + | chr8_2:30130529-30130548 | Msa1243640:five_prime_UTR | 25.0% |
! | ATTTAGTTGAAGAATGAAGT+TGG | + | chr8_2:30130640-30130659 | Msa1243640:exon | 25.0% |
!! | ACTTGTTAAGAAACCTAAAA+GGG | + | chr8_2:30130823-30130842 | Msa1243640:CDS | 25.0% |
! | TATAAGCTGTTTATCCAAAT+AGG | + | chr8_2:30131306-30131325 | Msa1243640:intron | 25.0% |
!! | TAGAATGTTCATATTTTGTG+TGG | + | chr8_2:30131378-30131397 | Msa1243640:intron | 25.0% |
! | GACTTATTTCAATTGCTATA+TGG | - | chr8_2:30131511-30131530 | None:intergenic | 25.0% |
! | TTCTGTTTAATGGAGAATTT+AGG | + | chr8_2:30131585-30131604 | Msa1243640:intron | 25.0% |
! | TAATATAAAAACTGAAGCCT+CGG | - | chr8_2:30131622-30131641 | None:intergenic | 25.0% |
! | TATGCAATAAGTACTAATTG+TGG | + | chr8_2:30132011-30132030 | Msa1243640:intron | 25.0% |
!! | ATCAACTTCACCAATTTTAA+CGG | + | chr8_2:30132070-30132089 | Msa1243640:intron | 25.0% |
!! | GCAATTATGCTTAAAGTTTT+TGG | + | chr8_2:30132780-30132799 | Msa1243640:intron | 25.0% |
! | TTTATACTACATTATAGTGC+TGG | - | chr8_2:30132945-30132964 | None:intergenic | 25.0% |
!! | TGCTTTTATAAAGGAAAGAA+AGG | + | chr8_2:30133423-30133442 | Msa1243640:intron | 25.0% |
! | CTAACTCAACAATAGAAAAT+CGG | - | chr8_2:30133590-30133609 | None:intergenic | 25.0% |
!!! | TGACTTATAAACACTTTTTC+CGG | - | chr8_2:30133758-30133777 | None:intergenic | 25.0% |
!! | TTTTTGCTTCTCTGTTAATA+TGG | + | chr8_2:30134037-30134056 | Msa1243640:intron | 25.0% |
!! | AGTGGTTAGTATATCTATTT+TGG | + | chr8_2:30134210-30134229 | Msa1243640:CDS | 25.0% |
! | TTTCATGAAGAAAGAATTTG+AGG | - | chr8_2:30134727-30134746 | None:intergenic | 25.0% |
!!! | TGTTTTGAAACATATAACCA+CGG | + | chr8_2:30134941-30134960 | Msa1243640:intron | 25.0% |
!! | CATGACTTTAGAAGTAATTA+TGG | + | chr8_2:30135031-30135050 | Msa1243640:intron | 25.0% |
! | ATAAAAAATCTTCGTACTGA+CGG | + | chr8_2:30135103-30135122 | Msa1243640:intron | 25.0% |
! | ATCAGAAACCAATTAATAAC+AGG | - | chr8_2:30135391-30135410 | None:intergenic | 25.0% |
! | AGGTGAAATCATGATATAAT+CGG | - | chr8_2:30135569-30135588 | None:intergenic | 25.0% |
! | ACAAATTTCGACAACAATTT+AGG | - | chr8_2:30135589-30135608 | None:intergenic | 25.0% |
!!! | CACTAGTAATGCTTTTAATT+TGG | + | chr8_2:30135724-30135743 | Msa1243640:CDS | 25.0% |
!!! | TTTTGTTTCCTACTTGTTTT+TGG | + | chr8_2:30135768-30135787 | Msa1243640:CDS | 25.0% |
! | TAATTATCTGAAAGAATGCA+TGG | - | chr8_2:30136756-30136775 | None:intergenic | 25.0% |
TCTGTGAAAAAATGGAACAT+TGG | - | chr8_2:30130523-30130542 | None:intergenic | 30.0% | |
!! | CCTTTGTTTCTGTGAAAAAA+TGG | - | chr8_2:30130531-30130550 | None:intergenic | 30.0% |
!!! | CCATTTTTTCACAGAAACAA+AGG | + | chr8_2:30130528-30130547 | Msa1243640:five_prime_UTR | 30.0% |
AAGTTGGATAAGATTGAAGA+AGG | + | chr8_2:30130656-30130675 | Msa1243640:CDS | 30.0% | |
!! | GACTTGTTAAGAAACCTAAA+AGG | + | chr8_2:30130822-30130841 | Msa1243640:CDS | 30.0% |
GTTTATAAGTGTAACTCAGA+TGG | + | chr8_2:30130996-30131015 | Msa1243640:intron | 30.0% | |
TTTGAGAGAACTTATGAACA+CGG | + | chr8_2:30131127-30131146 | Msa1243640:intron | 30.0% | |
! | AAAAGAGGAAGGGAATTTTA+AGG | - | chr8_2:30131677-30131696 | None:intergenic | 30.0% |
TAGAACCTTATGGAATCATT+TGG | + | chr8_2:30131873-30131892 | Msa1243640:intron | 30.0% | |
ATAGACCAAATGATTCCATA+AGG | - | chr8_2:30131881-30131900 | None:intergenic | 30.0% | |
ACACAAAATTTGCATCACAA+AGG | - | chr8_2:30131973-30131992 | None:intergenic | 30.0% | |
TATTGCATACTACTCATTAG+TGG | - | chr8_2:30132000-30132019 | None:intergenic | 30.0% | |
GTGTTAAATAAAAGGTGAAG+TGG | - | chr8_2:30132121-30132140 | None:intergenic | 30.0% | |
GTTCTCAAAGCTAATGATAA+TGG | + | chr8_2:30132397-30132416 | Msa1243640:CDS | 30.0% | |
!! | AAAGCTAATGATAATGGAGA+AGG | + | chr8_2:30132403-30132422 | Msa1243640:CDS | 30.0% |
! | AATGTTGATTGCTTAACTGT+AGG | + | chr8_2:30132482-30132501 | Msa1243640:intron | 30.0% |
!! | CGAAAGGGCTTTAAAAATAA+AGG | + | chr8_2:30132625-30132644 | Msa1243640:CDS | 30.0% |
! | AAATAAAGGAGACTTTGGAA+AGG | + | chr8_2:30132639-30132658 | Msa1243640:CDS | 30.0% |
! | GAAAAATGTGTTGTTAGTGT+TGG | + | chr8_2:30132673-30132692 | Msa1243640:CDS | 30.0% |
CTTGGAACTTCTATGATTAT+TGG | + | chr8_2:30132701-30132720 | Msa1243640:CDS | 30.0% | |
ACTTCTATGATTATTGGTGA+TGG | + | chr8_2:30132707-30132726 | Msa1243640:CDS | 30.0% | |
CTTATTGTAAAATTCATGCC+AGG | - | chr8_2:30132826-30132845 | None:intergenic | 30.0% | |
TACAATAAGCATATGTCTCT+AGG | + | chr8_2:30132837-30132856 | Msa1243640:intron | 30.0% | |
TAGTTTCGTCCTCATAATTT+AGG | - | chr8_2:30133022-30133041 | None:intergenic | 30.0% | |
! | ATTTGTCATCTGAAATGGAT+AGG | - | chr8_2:30133135-30133154 | None:intergenic | 30.0% |
AGTAGATTTGTCATCTGAAA+TGG | - | chr8_2:30133140-30133159 | None:intergenic | 30.0% | |
! | CAGGATCAAATAAATGGATT+TGG | + | chr8_2:30133299-30133318 | Msa1243640:CDS | 30.0% |
! | CAAATAAATGGATTTGGTAC+AGG | + | chr8_2:30133305-30133324 | Msa1243640:CDS | 30.0% |
CACTTATAAAACGTACTTTC+AGG | - | chr8_2:30133544-30133563 | None:intergenic | 30.0% | |
!! | CTGAAAGTACGTTTTATAAG+TGG | + | chr8_2:30133542-30133561 | Msa1243640:intron | 30.0% |
!! | CAATAGAAAATCGGCTTTTA+AGG | - | chr8_2:30133581-30133600 | None:intergenic | 30.0% |
! | CGATTTTCTATTGTTGAGTT+AGG | + | chr8_2:30133588-30133607 | Msa1243640:intron | 30.0% |
TGACCAAACAGATCTTATAT+AGG | - | chr8_2:30133644-30133663 | None:intergenic | 30.0% | |
CTAACTCAATCCTATAAAAC+CGG | - | chr8_2:30133803-30133822 | None:intergenic | 30.0% | |
!!! | AATTCGGTGTTTGCTATTTT+TGG | + | chr8_2:30134095-30134114 | Msa1243640:intron | 30.0% |
! | AACCTCTTTTCTCATTTTCA+TGG | + | chr8_2:30134470-30134489 | Msa1243640:intron | 30.0% |
TAATTGACATGCATAATGCA+TGG | + | chr8_2:30134512-30134531 | Msa1243640:intron | 30.0% | |
ATGCATAGAAACAACTCTTT+AGG | + | chr8_2:30134591-30134610 | Msa1243640:intron | 30.0% | |
TTTCAAAACACTATATCACC+TGG | - | chr8_2:30134931-30134950 | None:intergenic | 30.0% | |
AAACATATTATACTGACCGT+CGG | - | chr8_2:30134979-30134998 | None:intergenic | 30.0% | |
! | AAAACTACATCAAGAGGTAT+TGG | + | chr8_2:30135143-30135162 | Msa1243640:intron | 30.0% |
TCATACCTCAAAAAAGTTCA+TGG | + | chr8_2:30135351-30135370 | Msa1243640:CDS | 30.0% | |
CATACCTCAAAAAAGTTCAT+GGG | + | chr8_2:30135352-30135371 | Msa1243640:CDS | 30.0% | |
ACAGATATTGCAAATGCATA+TGG | + | chr8_2:30135451-30135470 | Msa1243640:CDS | 30.0% | |
! | TTTCTCCATCACTATTTTCA+TGG | + | chr8_2:30135480-30135499 | Msa1243640:intron | 30.0% |
ATACTCCATGAAAATAGTGA+TGG | - | chr8_2:30135488-30135507 | None:intergenic | 30.0% | |
CATTTCATTTGTTCTATTGC+AGG | + | chr8_2:30135657-30135676 | Msa1243640:intron | 30.0% | |
!!! | TTTTTTCTCTTACTTCCCTT+CGG | - | chr8_2:30135923-30135942 | None:intergenic | 30.0% |
TTATATAGCAATCCTATTCC+TGG | - | chr8_2:30135999-30136018 | None:intergenic | 30.0% | |
AATGCAGACAAAAACTACAA+TGG | - | chr8_2:30136087-30136106 | None:intergenic | 30.0% | |
CGGAACATATGATAATCTTT+CGG | - | chr8_2:30136170-30136189 | None:intergenic | 30.0% | |
TCTTGAGAAATTCTTGAGAA+GGG | + | chr8_2:30136265-30136284 | Msa1243640:CDS | 30.0% | |
! | CTGAATCAGTTTTCACAAGT+GGG | + | chr8_2:30130611-30130630 | Msa1243640:five_prime_UTR | 35.0% |
! | TTGATGGAAGTGAAGTTGAT+TGG | + | chr8_2:30130732-30130751 | Msa1243640:CDS | 35.0% |
! | TGATGGAAGTGAAGTTGATT+GGG | + | chr8_2:30130733-30130752 | Msa1243640:CDS | 35.0% |
! | TCAAAAGAGTCAACCCTTTT+AGG | - | chr8_2:30130839-30130858 | None:intergenic | 35.0% |
! | CTCTTTTGATGTTGAAGCTA+TGG | + | chr8_2:30130850-30130869 | Msa1243640:CDS | 35.0% |
TAACTCAGATGGTATTAGAC+CGG | + | chr8_2:30131007-30131026 | Msa1243640:intron | 35.0% | |
TGTGTGTGAATTTCGCTATT+AGG | + | chr8_2:30131336-30131355 | Msa1243640:intron | 35.0% | |
GCATAATGTGTTGTAATCGT+TGG | + | chr8_2:30131400-30131419 | Msa1243640:intron | 35.0% | |
TGTAATCGTTGGTATCCATA+AGG | + | chr8_2:30131411-30131430 | Msa1243640:intron | 35.0% | |
ACTACTTTCTGCAATCCTTA+TGG | - | chr8_2:30131429-30131448 | None:intergenic | 35.0% | |
ATAAGGATTGCAGAAAGTAG+TGG | + | chr8_2:30131428-30131447 | Msa1243640:intron | 35.0% | |
TGCTTCACATAGCGAAATAT+AGG | - | chr8_2:30131458-30131477 | None:intergenic | 35.0% | |
AGCAGAAGAAAAAAGAGGAA+GGG | - | chr8_2:30131687-30131706 | None:intergenic | 35.0% | |
TAGCAGAAGAAAAAAGAGGA+AGG | - | chr8_2:30131688-30131707 | None:intergenic | 35.0% | |
GCAATAGCAGAAGAAAAAAG+AGG | - | chr8_2:30131692-30131711 | None:intergenic | 35.0% | |
!! | GTTTCTACAAGTTGATGTAG+CGG | - | chr8_2:30131714-30131733 | None:intergenic | 35.0% |
CTACATCAACTTGTAGAAAC+TGG | + | chr8_2:30131714-30131733 | Msa1243640:intron | 35.0% | |
TTGCCCTAATAGCGAAATAT+TGG | + | chr8_2:30131750-30131769 | Msa1243640:intron | 35.0% | |
TTAGTTGTGAGAGCAAACAA+TGG | + | chr8_2:30131826-30131845 | Msa1243640:intron | 35.0% | |
TGATCCTTGATAGAACCTTA+TGG | + | chr8_2:30131863-30131882 | Msa1243640:intron | 35.0% | |
GATTCCATAAGGTTCTATCA+AGG | - | chr8_2:30131870-30131889 | None:intergenic | 35.0% | |
TTAGAACTACAAGAACAACC+AGG | - | chr8_2:30131932-30131951 | None:intergenic | 35.0% | |
! | CTTTGAGAGACCGTTAAAAT+TGG | - | chr8_2:30132083-30132102 | None:intergenic | 35.0% |
! | CTTTTGTGCTTATGTGAATC+AGG | + | chr8_2:30132174-30132193 | Msa1243640:intron | 35.0% |
TGAAATGCTAATGCAATGGT+AGG | - | chr8_2:30132214-30132233 | None:intergenic | 35.0% | |
! | AGTCTGAAATGCTAATGCAA+TGG | - | chr8_2:30132218-30132237 | None:intergenic | 35.0% |
!! | AGTCCTCTTTATGTTTTTGC+TGG | + | chr8_2:30132268-30132287 | Msa1243640:CDS | 35.0% |
ACACCAGCAAAAACATAAAG+AGG | - | chr8_2:30132274-30132293 | None:intergenic | 35.0% | |
ACATCGTCATCTGAGTTAAT+AGG | - | chr8_2:30132310-30132329 | None:intergenic | 35.0% | |
! | AGATTTGTTCATCAGCTTGT+TGG | - | chr8_2:30132571-30132590 | None:intergenic | 35.0% |
!! | TTGTTAGTGTTGGTTCTTCT+TGG | + | chr8_2:30132683-30132702 | Msa1243640:CDS | 35.0% |
TTCTCATGTCTTCTATATCC+TGG | + | chr8_2:30132805-30132824 | Msa1243640:intron | 35.0% | |
TGTGAGTGCTAAAATTGGTA+TGG | - | chr8_2:30132872-30132891 | None:intergenic | 35.0% | |
!! | ATACCAATTTTAGCACTCAC+AGG | + | chr8_2:30132871-30132890 | Msa1243640:intron | 35.0% |
GAGTTGTCAAATAGTAGCTA+TGG | + | chr8_2:30132965-30132984 | Msa1243640:intron | 35.0% | |
TTGTCAAATAGTAGCTATGG+TGG | + | chr8_2:30132968-30132987 | Msa1243640:intron | 35.0% | |
TTTCGTCCTCATAATTTAGG+TGG | - | chr8_2:30133019-30133038 | None:intergenic | 35.0% | |
ATGTACCTTAAGTATAACCG+TGG | + | chr8_2:30133237-30133256 | Msa1243640:intron | 35.0% | |
GGTCTACAGGATCAAATAAA+TGG | + | chr8_2:30133293-30133312 | Msa1243640:CDS | 35.0% | |
!! | GTGTCTGCTTGCTTTTATAA+AGG | + | chr8_2:30133414-30133433 | Msa1243640:intron | 35.0% |
TTCATTTCTCCATCGAGATT+TGG | - | chr8_2:30133471-30133490 | None:intergenic | 35.0% | |
TCCTACATTAGTGTGAGATA+TGG | + | chr8_2:30133518-30133537 | Msa1243640:intron | 35.0% | |
!!! | AAAATCGGCTTTTAAGGTGA+GGG | - | chr8_2:30133575-30133594 | None:intergenic | 35.0% |
GTCCCACATTAAATGAGATA+TGG | + | chr8_2:30133732-30133751 | Msa1243640:intron | 35.0% | |
GGCCATATCTCATTTAATGT+GGG | - | chr8_2:30133737-30133756 | None:intergenic | 35.0% | |
CACATTAAATGAGATATGGC+CGG | + | chr8_2:30133736-30133755 | Msa1243640:intron | 35.0% | |
! | AAAACCGGCTTAATCAGTAA+GGG | - | chr8_2:30133788-30133807 | None:intergenic | 35.0% |
! | TAAAACCGGCTTAATCAGTA+AGG | - | chr8_2:30133789-30133808 | None:intergenic | 35.0% |
!! | ACTGATTAAGCCGGTTTTAT+AGG | + | chr8_2:30133790-30133809 | Msa1243640:intron | 35.0% |
!! | CGGTTTTATAGGATTGAGTT+AGG | + | chr8_2:30133801-30133820 | Msa1243640:intron | 35.0% |
TTAATGTACTTTGCCTCAGT+AGG | + | chr8_2:30133933-30133952 | Msa1243640:intron | 35.0% | |
!!! | TATATCTATTTTGGTCCTCG+TGG | + | chr8_2:30134219-30134238 | Msa1243640:CDS | 35.0% |
TTGTTCAGCATTCAACAGTT+CGG | + | chr8_2:30134244-30134263 | Msa1243640:CDS | 35.0% | |
AGAACCATAAAGCAAGTACA+GGG | - | chr8_2:30134297-30134316 | None:intergenic | 35.0% | |
AAGAACCATAAAGCAAGTAC+AGG | - | chr8_2:30134298-30134317 | None:intergenic | 35.0% | |
! | TGCTTTATGGTTCTTTTCTC+TGG | + | chr8_2:30134303-30134322 | Msa1243640:CDS | 35.0% |
! | GCTTTATGGTTCTTTTCTCT+GGG | + | chr8_2:30134304-30134323 | Msa1243640:CDS | 35.0% |
! | TTCTTTTCTCTGGGTTCTAT+TGG | + | chr8_2:30134313-30134332 | Msa1243640:CDS | 35.0% |
! | AGAATAATGGCAAAAGTGCA+TGG | + | chr8_2:30134410-30134429 | Msa1243640:CDS | 35.0% |
AGCCATGAAAATGAGAAAAG+AGG | - | chr8_2:30134475-30134494 | None:intergenic | 35.0% | |
ACAAGAACACACATCAGTTA+CGG | - | chr8_2:30134549-30134568 | None:intergenic | 35.0% | |
!! | AGAAACAACTCTTTAGGACA+TGG | + | chr8_2:30134597-30134616 | Msa1243640:intron | 35.0% |
! | TTTTACTGTACCAGCAATAC+AGG | + | chr8_2:30134692-30134711 | Msa1243640:CDS | 35.0% |
! | TTTTCATCAGAAAAGCAGCT+TGG | - | chr8_2:30134870-30134889 | None:intergenic | 35.0% |
AATACACTTGAATAAGACGC+AGG | - | chr8_2:30134895-30134914 | None:intergenic | 35.0% | |
GTATTCTTCAAATCTGTTCC+AGG | + | chr8_2:30134910-30134929 | Msa1243640:CDS | 35.0% | |
! | CAAACGTTTTTACTGATCTG+AGG | + | chr8_2:30135061-30135080 | Msa1243640:intron | 35.0% |
AGTGTAGCTATAACAAACAC+TGG | - | chr8_2:30135235-30135254 | None:intergenic | 35.0% | |
!! | GTGTTTGTTATAGCTACACT+TGG | + | chr8_2:30135235-30135254 | Msa1243640:CDS | 35.0% |
TTCATGCGTTAAGCAATCAA+TGG | + | chr8_2:30135297-30135316 | Msa1243640:CDS | 35.0% | |
GTTAAGCAATCAATGGCTTT+GGG | + | chr8_2:30135304-30135323 | Msa1243640:CDS | 35.0% | |
TATGAATTATCTTGAGCCTG+GGG | - | chr8_2:30135336-30135355 | None:intergenic | 35.0% | |
GTATGAATTATCTTGAGCCT+GGG | - | chr8_2:30135337-30135356 | None:intergenic | 35.0% | |
!!! | TTGACCCATGAACTTTTTTG+AGG | - | chr8_2:30135359-30135378 | None:intergenic | 35.0% |
TTGCAATATCTGTAGTGCTT+TGG | - | chr8_2:30135444-30135463 | None:intergenic | 35.0% | |
! | AGTCCTATCGAAAATTTTCG+AGG | + | chr8_2:30135818-30135837 | Msa1243640:CDS | 35.0% |
! | GTCCTATCGAAAATTTTCGA+GGG | + | chr8_2:30135819-30135838 | Msa1243640:CDS | 35.0% |
ATAGTTCCACGTATACATCA+CGG | - | chr8_2:30135883-30135902 | None:intergenic | 35.0% | |
TGATGTATACGTGGAACTAT+GGG | + | chr8_2:30135883-30135902 | Msa1243640:CDS | 35.0% | |
ATGGACTTAATGCTTGATCT+TGG | + | chr8_2:30135948-30135967 | Msa1243640:CDS | 35.0% | |
TACTCTTACTGTTCCAAGAT+TGG | - | chr8_2:30135976-30135995 | None:intergenic | 35.0% | |
CTATATAATGAGCTTGTCCA+AGG | + | chr8_2:30136011-30136030 | Msa1243640:CDS | 35.0% | |
TAAATATGTTCCGATTCCTG+TGG | + | chr8_2:30136106-30136125 | Msa1243640:CDS | 35.0% | |
AATCTTTCGGACATACTCTT+CGG | - | chr8_2:30136157-30136176 | None:intergenic | 35.0% | |
TAAGAAGTTGCTCAAATGCA+TGG | - | chr8_2:30136238-30136257 | None:intergenic | 35.0% | |
TGCATTTGAGCAACTTCTTA+TGG | + | chr8_2:30136238-30136257 | Msa1243640:CDS | 35.0% | |
GTCTTGAGAAATTCTTGAGA+AGG | + | chr8_2:30136264-30136283 | Msa1243640:CDS | 35.0% | |
AAATTCTGACCATGCAATAG+TGG | - | chr8_2:30136410-30136429 | None:intergenic | 35.0% | |
GGTCAGAATTTAGAAGAAAC+AGG | + | chr8_2:30136419-30136438 | Msa1243640:CDS | 35.0% | |
! | TTTCTGAGAAAGAATTGCAG+AGG | + | chr8_2:30136647-30136666 | Msa1243640:CDS | 35.0% |
ACTTGAATGATATTGGTGTG+AGG | - | chr8_2:30136695-30136714 | None:intergenic | 35.0% | |
TCACACCAATATCATTCAAG+TGG | + | chr8_2:30136694-30136713 | Msa1243640:CDS | 35.0% | |
CACACCAATATCATTCAAGT+GGG | + | chr8_2:30136695-30136714 | Msa1243640:CDS | 35.0% | |
ACACCAATATCATTCAAGTG+GGG | + | chr8_2:30136696-30136715 | Msa1243640:CDS | 35.0% | |
CGGGAAAAGAAAAAATAGAG+TGG | - | chr8_2:30136818-30136837 | None:intergenic | 35.0% | |
! | TTTTTACCAATCATCGCTGA+CGG | - | chr8_2:30136838-30136857 | None:intergenic | 35.0% |
! | GCTGAATCAGTTTTCACAAG+TGG | + | chr8_2:30130610-30130629 | Msa1243640:five_prime_UTR | 40.0% |
! | AGATTGAAGAAGGAAGTGTG+AGG | + | chr8_2:30130666-30130685 | Msa1243640:CDS | 40.0% |
ATGGAAGTGATGGTAGAGAA+GGG | + | chr8_2:30130780-30130799 | Msa1243640:CDS | 40.0% | |
! | GAGAAGGGTATGGTTCAATT+AGG | + | chr8_2:30130795-30130814 | Msa1243640:CDS | 40.0% |
AACTCAGATGGTATTAGACC+GGG | + | chr8_2:30131008-30131027 | Msa1243640:intron | 40.0% | |
AAACCATCTTCTCCGCATTT+AGG | + | chr8_2:30131060-30131079 | Msa1243640:intron | 40.0% | |
AACCATCTTCTCCGCATTTA+GGG | + | chr8_2:30131061-30131080 | Msa1243640:intron | 40.0% | |
ATCCAAACAAGCCCTAAATG+CGG | - | chr8_2:30131075-30131094 | None:intergenic | 40.0% | |
! | CATTTAGGGCTTGTTTGGAT+TGG | + | chr8_2:30131075-30131094 | Msa1243640:intron | 40.0% |
GCGAAATTCACACACACTAA+GGG | - | chr8_2:30131332-30131351 | None:intergenic | 40.0% | |
AGCGAAATTCACACACACTA+AGG | - | chr8_2:30131333-30131352 | None:intergenic | 40.0% | |
ATAGCATTGCTGGCAAATAG+TGG | + | chr8_2:30131482-30131501 | Msa1243640:intron | 40.0% | |
TAGCATTGCTGGCAAATAGT+GGG | + | chr8_2:30131483-30131502 | Msa1243640:intron | 40.0% | |
TTTAGGAGTAATACTCACCG+AGG | + | chr8_2:30131602-30131621 | Msa1243640:intron | 40.0% | |
TATTAGGGCAATAGCTTCTG+CGG | - | chr8_2:30131741-30131760 | None:intergenic | 40.0% | |
GCGCCAATATTTCGCTATTA+GGG | - | chr8_2:30131756-30131775 | None:intergenic | 40.0% | |
AGCGCCAATATTTCGCTATT+AGG | - | chr8_2:30131757-30131776 | None:intergenic | 40.0% | |
! | TCACTGCTATTTGACAACAC+TGG | + | chr8_2:30131787-30131806 | Msa1243640:intron | 40.0% |
TGTGAGAGCAAACAATGGTT+TGG | + | chr8_2:30131831-30131850 | Msa1243640:intron | 40.0% | |
!! | GTTCTTGTAGTTCTAAGTGC+AGG | + | chr8_2:30131936-30131955 | Msa1243640:intron | 40.0% |
! | CATGAAGCATTACAATGCAG+AGG | + | chr8_2:30132038-30132057 | Msa1243640:intron | 40.0% |
TGAATCAGGATCTTTCCCTT+TGG | + | chr8_2:30132188-30132207 | Msa1243640:intron | 40.0% | |
TAATGCAATGGTAGGCCAAA+GGG | - | chr8_2:30132206-30132225 | None:intergenic | 40.0% | |
GCATTAGCATTTCAGACTCT+TGG | + | chr8_2:30132220-30132239 | Msa1243640:CDS | 40.0% | |
!! | CAGACTCTTGGTGTTGTATA+TGG | + | chr8_2:30132232-30132251 | Msa1243640:CDS | 40.0% |
!! | TGGTGTTGTATATGGTGACA+TGG | + | chr8_2:30132240-30132259 | Msa1243640:CDS | 40.0% |
! | GGTGTTGTATATGGTGACAT+GGG | + | chr8_2:30132241-30132260 | Msa1243640:CDS | 40.0% |
TAACTCAGATGACGATGTCT+TGG | + | chr8_2:30132312-30132331 | Msa1243640:CDS | 40.0% | |
AACTCAGATGACGATGTCTT+GGG | + | chr8_2:30132313-30132332 | Msa1243640:CDS | 40.0% | |
GTTGATTGCTTAACTGTAGG+AGG | + | chr8_2:30132485-30132504 | Msa1243640:intron | 40.0% | |
!! | TTTAAAGCCCTTTCGAGTTC+TGG | - | chr8_2:30132620-30132639 | None:intergenic | 40.0% |
ATTCTAACTCCAGCGATATC+AGG | + | chr8_2:30132731-30132750 | Msa1243640:CDS | 40.0% | |
! | CGCTTTTAGTGCCAGAAATT+AGG | - | chr8_2:30132996-30133015 | None:intergenic | 40.0% |
! | AAAGCGCCACCTAAATTATG+AGG | + | chr8_2:30133010-30133029 | Msa1243640:intron | 40.0% |
TGAACTACACTCTGTTGAAC+CGG | + | chr8_2:30133088-30133107 | Msa1243640:intron | 40.0% | |
! | AAGCAAAGTGCCAATTGAAC+CGG | - | chr8_2:30133110-30133129 | None:intergenic | 40.0% |
AAGCACCACGGTTATACTTA+AGG | - | chr8_2:30133245-30133264 | None:intergenic | 40.0% | |
TTGATCCTGTAGACCACTTA+TGG | - | chr8_2:30133288-30133307 | None:intergenic | 40.0% | |
! | TCAAAGTGTCCAAATCTCGA+TGG | + | chr8_2:30133459-30133478 | Msa1243640:intron | 40.0% |
GGACACTCAACATTGTCAAA+AGG | - | chr8_2:30133501-30133520 | None:intergenic | 40.0% | |
GCCATATCTCACACTAATGT+AGG | - | chr8_2:30133522-30133541 | None:intergenic | 40.0% | |
!!! | GAAAATCGGCTTTTAAGGTG+AGG | - | chr8_2:30133576-30133595 | None:intergenic | 40.0% |
GGGCCTATATAAGATCTGTT+TGG | + | chr8_2:30133638-30133657 | Msa1243640:intron | 40.0% | |
CGGCCATATCTCATTTAATG+TGG | - | chr8_2:30133738-30133757 | None:intergenic | 40.0% | |
!!! | TTGCAGGGATTTTGACTTCA+AGG | - | chr8_2:30133887-30133906 | None:intergenic | 40.0% |
! | GTTTTTACTTGCAGCTGAAG+TGG | + | chr8_2:30134192-30134211 | Msa1243640:intron | 40.0% |
GAACCATAAAGCAAGTACAG+GGG | - | chr8_2:30134296-30134315 | None:intergenic | 40.0% | |
TTTCTTATGCATTCTCGTGC+AGG | + | chr8_2:30134639-30134658 | Msa1243640:intron | 40.0% | |
GAAGCAATGTTTGCAGATCT+TGG | + | chr8_2:30134666-30134685 | Msa1243640:CDS | 40.0% | |
ACAGATTGCTTTCACTTGTG+TGG | + | chr8_2:30134813-30134832 | Msa1243640:intron | 40.0% | |
ATATAAGCAAGGAGGAGACA+TGG | - | chr8_2:30134844-30134863 | None:intergenic | 40.0% | |
ATGTCTCCTCCTTGCTTATA+TGG | + | chr8_2:30134843-30134862 | Msa1243640:CDS | 40.0% | |
TGTCTCCTCCTTGCTTATAT+GGG | + | chr8_2:30134844-30134863 | Msa1243640:CDS | 40.0% | |
! | AAAAATCTTCGTACTGACGG+TGG | + | chr8_2:30135106-30135125 | Msa1243640:intron | 40.0% |
! | GTTGAACAGAGAGTCTTTTC+TGG | + | chr8_2:30135209-30135228 | Msa1243640:intron | 40.0% |
AGCAGATATCATTGCTTGAC+TGG | - | chr8_2:30135272-30135291 | None:intergenic | 40.0% | |
CGTTAAGCAATCAATGGCTT+TGG | + | chr8_2:30135303-30135322 | Msa1243640:CDS | 40.0% | |
GGTATGAATTATCTTGAGCC+TGG | - | chr8_2:30135338-30135357 | None:intergenic | 40.0% | |
!! | ATCTGTAGTGCTTTGGAAGA+TGG | - | chr8_2:30135437-30135456 | None:intergenic | 40.0% |
!! | ATGGTTCTAAGGTGACAACT+AGG | + | chr8_2:30135524-30135543 | Msa1243640:intron | 40.0% |
AAGCATTACTAGTGTCACCA+AGG | - | chr8_2:30135718-30135737 | None:intergenic | 40.0% | |
CCACAGAACCAAAAACAAGT+AGG | - | chr8_2:30135779-30135798 | None:intergenic | 40.0% | |
!!! | CCTACTTGTTTTTGGTTCTG+TGG | + | chr8_2:30135776-30135795 | Msa1243640:CDS | 40.0% |
! | CACCCTCGAAAATTTTCGAT+AGG | - | chr8_2:30135824-30135843 | None:intergenic | 40.0% |
!! | CTATCGAAAATTTTCGAGGG+TGG | + | chr8_2:30135822-30135841 | Msa1243640:CDS | 40.0% |
AAAAAGGTAGCAAAGGCAAG+TGG | - | chr8_2:30135855-30135874 | None:intergenic | 40.0% | |
ATACATCACGGAGAGGAAAA+AGG | - | chr8_2:30135871-30135890 | None:intergenic | 40.0% | |
GTGATGTATACGTGGAACTA+TGG | + | chr8_2:30135882-30135901 | Msa1243640:CDS | 40.0% | |
CTTGATCTTGGTTCCAATCT+TGG | + | chr8_2:30135960-30135979 | Msa1243640:CDS | 40.0% | |
!! | ACAGTAAGAGTACCAGGAAT+AGG | + | chr8_2:30135984-30136003 | Msa1243640:CDS | 40.0% |
TAGAAGGAACTGCAGGAAAA+TGG | - | chr8_2:30136045-30136064 | None:intergenic | 40.0% | |
ACTACAATGGAATGAAGAGC+TGG | - | chr8_2:30136074-30136093 | None:intergenic | 40.0% | |
TTGGAGGGTAACTTAACTGA+TGG | + | chr8_2:30136311-30136330 | Msa1243640:CDS | 40.0% | |
AGAATTTCTTGTATCCACCG+AGG | - | chr8_2:30136348-30136367 | None:intergenic | 40.0% | |
CTTAGGATTCCACTATTGCA+TGG | + | chr8_2:30136398-30136417 | Msa1243640:CDS | 40.0% | |
ACCATCGAGTTATATGTCGT+CGG | + | chr8_2:30136478-30136497 | Msa1243640:CDS | 40.0% | |
GAAAGCTCGTATTCTAGACT+AGG | - | chr8_2:30136512-30136531 | None:intergenic | 40.0% | |
TTCAGCTCTTAGAGAAGCAA+TGG | + | chr8_2:30136529-30136548 | Msa1243640:CDS | 40.0% | |
! | CTTAGAGAAGCAATGGATTC+AGG | + | chr8_2:30136536-30136555 | Msa1243640:CDS | 40.0% |
TCAGGATTCACCTATTTGCT+TGG | + | chr8_2:30136554-30136573 | Msa1243640:CDS | 40.0% | |
TTCACCTATTTGCTTGGACA+TGG | + | chr8_2:30136560-30136579 | Msa1243640:CDS | 40.0% | |
ATCTCCATGTCCAAGCAAAT+AGG | - | chr8_2:30136567-30136586 | None:intergenic | 40.0% | |
CATCCCCACTTGAATGATAT+TGG | - | chr8_2:30136702-30136721 | None:intergenic | 40.0% | |
TCAAGTGGGGATGACATATA+TGG | + | chr8_2:30136709-30136728 | Msa1243640:CDS | 40.0% | |
! | TTTTACCAATCATCGCTGAC+GGG | - | chr8_2:30136837-30136856 | None:intergenic | 40.0% |
! | AGAAGGAAGTGTGAGGTTGT+TGG | + | chr8_2:30130673-30130692 | Msa1243640:CDS | 45.0% |
! | GAAGGAAGTGTGAGGTTGTT+GGG | + | chr8_2:30130674-30130693 | Msa1243640:CDS | 45.0% |
ATTGGGATGAAGATCCTCCA+TGG | + | chr8_2:30130750-30130769 | Msa1243640:CDS | 45.0% | |
TCACTTCCATGATGAGACCA+TGG | - | chr8_2:30130770-30130789 | None:intergenic | 45.0% | |
TGGTCTCATCATGGAAGTGA+TGG | + | chr8_2:30130770-30130789 | Msa1243640:CDS | 45.0% | |
CATGGAAGTGATGGTAGAGA+AGG | + | chr8_2:30130779-30130798 | Msa1243640:CDS | 45.0% | |
AGTGATGGTAGAGAAGGGTA+TGG | + | chr8_2:30130785-30130804 | Msa1243640:CDS | 45.0% | |
TGGTCATGATCAACACTCCA+AGG | + | chr8_2:30130883-30130902 | Msa1243640:CDS | 45.0% | |
ACTCAGATGGTATTAGACCG+GGG | + | chr8_2:30131009-30131028 | Msa1243640:intron | 45.0% | |
ACACACACTAAGGGCCTATT+TGG | - | chr8_2:30131323-30131342 | None:intergenic | 45.0% | |
TGACCTCACCAAGTATGAGA+TGG | + | chr8_2:30131906-30131925 | Msa1243640:intron | 45.0% | |
CTAATGCAATGGTAGGCCAA+AGG | - | chr8_2:30132207-30132226 | None:intergenic | 45.0% | |
! | TTTTGCTGGTGTCTTCAGCA+AGG | + | chr8_2:30132282-30132301 | Msa1243640:CDS | 45.0% |
ACTCAGATGACGATGTCTTG+GGG | + | chr8_2:30132314-30132333 | Msa1243640:CDS | 45.0% | |
!! | TCATCAGCTTGTTGGCGATT+CGG | - | chr8_2:30132563-30132582 | None:intergenic | 45.0% |
GTGCCTGTGAGTGCTAAAAT+TGG | - | chr8_2:30132877-30132896 | None:intergenic | 45.0% | |
! | CTCTGTTGAACCGGTTCAAT+TGG | + | chr8_2:30133097-30133116 | Msa1243640:intron | 45.0% |
CATGCTCAAGACTAGACATC+TGG | - | chr8_2:30133695-30133714 | None:intergenic | 45.0% | |
!! | TGTCTAGTCTTGAGCATGAC+AGG | + | chr8_2:30133697-30133716 | Msa1243640:intron | 45.0% |
! | GCATCCCTTACTGATTAAGC+CGG | + | chr8_2:30133781-30133800 | Msa1243640:intron | 45.0% |
GAGATCTCAGAGATCTTGCA+GGG | - | chr8_2:30133902-30133921 | None:intergenic | 45.0% | |
TGAGATCTCAGAGATCTTGC+AGG | - | chr8_2:30133903-30133922 | None:intergenic | 45.0% | |
AGTAGGTCGACTATGGTTGA+TGG | + | chr8_2:30133950-30133969 | Msa1243640:intron | 45.0% | |
AGCATTCAACAGTTCGGTAC+TGG | + | chr8_2:30134250-30134269 | Msa1243640:CDS | 45.0% | |
! | AAAAGTGCATGGTCAGCTCT+TGG | + | chr8_2:30134421-30134440 | Msa1243640:CDS | 45.0% |
GATTCACAGACCTGTATTGC+TGG | - | chr8_2:30134705-30134724 | None:intergenic | 45.0% | |
GACAACTAGGATGCTTGCAA+AGG | + | chr8_2:30135537-30135556 | Msa1243640:intron | 45.0% | |
! | ATTGCAGGCATTGCTGAAGT+TGG | + | chr8_2:30135672-30135691 | Msa1243640:intron | 45.0% |
!! | TGCTGAAGTTGGTGTGATGA+TGG | + | chr8_2:30135683-30135702 | Msa1243640:CDS | 45.0% |
CATTACTAGTGTCACCAAGG+TGG | - | chr8_2:30135715-30135734 | None:intergenic | 45.0% | |
GGAGAGGAAAAAGGTAGCAA+AGG | - | chr8_2:30135862-30135881 | None:intergenic | 45.0% | |
!! | GAGTGTCTTGAAGTACCGAA+GGG | + | chr8_2:30135905-30135924 | Msa1243640:CDS | 45.0% |
!! | CTTGGAACAGTAAGAGTACC+AGG | + | chr8_2:30135978-30135997 | Msa1243640:CDS | 45.0% |
AGGAACTGCAGGAAAATGGA+GGG | - | chr8_2:30136041-30136060 | None:intergenic | 45.0% | |
AAGGAACTGCAGGAAAATGG+AGG | - | chr8_2:30136042-30136061 | None:intergenic | 45.0% | |
CAATGGAATGAAGAGCTGGA+AGG | - | chr8_2:30136070-30136089 | None:intergenic | 45.0% | |
TCTTGAGGAACCACAGGAAT+CGG | - | chr8_2:30136119-30136138 | None:intergenic | 45.0% | |
CTTTCTTCTTGAGGAACCAC+AGG | - | chr8_2:30136125-30136144 | None:intergenic | 45.0% | |
! | ATATGTTCCGCTGTGTTGCT+AGG | + | chr8_2:30136180-30136199 | Msa1243640:CDS | 45.0% |
GGTACGGTTACAAAGACGTT+CGG | + | chr8_2:30136201-30136220 | Msa1243640:CDS | 45.0% | |
! | GGGTAACTTAACTGATGGTG+TGG | + | chr8_2:30136316-30136335 | Msa1243640:CDS | 45.0% |
ATTTCTTGTATCCACCGAGG+CGG | - | chr8_2:30136345-30136364 | None:intergenic | 45.0% | |
TCTGATCTTGCAGCCAGTAA+TGG | + | chr8_2:30136365-30136384 | Msa1243640:CDS | 45.0% | |
AAGCTCTTCTGCTCCATTAC+TGG | - | chr8_2:30136381-30136400 | None:intergenic | 45.0% | |
! | GTAATGGAGCAGAAGAGCTT+AGG | + | chr8_2:30136381-30136400 | Msa1243640:CDS | 45.0% |
GGAACTTCTACCTCACATGA+AGG | + | chr8_2:30136440-30136459 | Msa1243640:CDS | 45.0% | |
TCCGACGACATATAACTCGA+TGG | - | chr8_2:30136482-30136501 | None:intergenic | 45.0% | |
CTGAGAAAGAATTGCAGAGG+AGG | + | chr8_2:30136650-30136669 | Msa1243640:CDS | 45.0% | |
!! | TTTATATAATTTATTTATTG+AGG | + | chr8_2:30130912-30130931 | Msa1243640:intron | 5.0% |
AGGTTGTTGGGAAGTAGCAG+TGG | + | chr8_2:30130686-30130705 | Msa1243640:CDS | 50.0% | |
TTGTTGGGAAGTAGCAGTGG+TGG | + | chr8_2:30130689-30130708 | Msa1243640:CDS | 50.0% | |
TGTTGGGAAGTAGCAGTGGT+GGG | + | chr8_2:30130690-30130709 | Msa1243640:CDS | 50.0% | |
TGGGAGTAGTGAGTCTAGGT+GGG | + | chr8_2:30130709-30130728 | Msa1243640:CDS | 50.0% | |
!! | AGTGAGTCTAGGTGGGTTGA+TGG | + | chr8_2:30130716-30130735 | Msa1243640:CDS | 50.0% |
GATCCTCCATGGTCTCATCA+TGG | + | chr8_2:30130761-30130780 | Msa1243640:CDS | 50.0% | |
CTTCCATGATGAGACCATGG+AGG | - | chr8_2:30130767-30130786 | None:intergenic | 50.0% | |
GAAGCTATGGAGATTGCTGC+TGG | + | chr8_2:30130863-30130882 | Msa1243640:CDS | 50.0% | |
AGCCCTAAATGCGGAGAAGA+TGG | - | chr8_2:30131066-30131085 | None:intergenic | 50.0% | |
! | CTCCGCATTTAGGGCTTGTT+TGG | + | chr8_2:30131070-30131089 | Msa1243640:intron | 50.0% |
GAAGCAGCAGATAGCATTGC+TGG | + | chr8_2:30131472-30131491 | Msa1243640:intron | 50.0% | |
! | AGGCCATCTCATACTTGGTG+AGG | - | chr8_2:30131912-30131931 | None:intergenic | 50.0% |
TCACCAAGTATGAGATGGCC+TGG | + | chr8_2:30131911-30131930 | Msa1243640:intron | 50.0% | |
CAACCAGGCCATCTCATACT+TGG | - | chr8_2:30131917-30131936 | None:intergenic | 50.0% | |
CTCAGATGACGATGTCTTGG+GGG | + | chr8_2:30132315-30132334 | Msa1243640:CDS | 50.0% | |
!! | CGCTGTACTCGCTGATTTGT+AGG | + | chr8_2:30132516-30132535 | Msa1243640:CDS | 50.0% |
TTCCTACGCCAGAACTCGAA+AGG | + | chr8_2:30132609-30132628 | Msa1243640:CDS | 50.0% | |
TCCTACGCCAGAACTCGAAA+GGG | + | chr8_2:30132610-30132629 | Msa1243640:CDS | 50.0% | |
GCTTACGTACCTGATATCGC+TGG | - | chr8_2:30132743-30132762 | None:intergenic | 50.0% | |
! | CTATGGTGGCGCCTAATTTC+TGG | + | chr8_2:30132982-30133001 | Msa1243640:intron | 50.0% |
ACCATACCAAGTCTCCTCTG+TGG | + | chr8_2:30133042-30133061 | Msa1243640:intron | 50.0% | |
CCATACCAAGTCTCCTCTGT+GGG | + | chr8_2:30133043-30133062 | Msa1243640:intron | 50.0% | |
CATACCAAGTCTCCTCTGTG+GGG | + | chr8_2:30133044-30133063 | Msa1243640:intron | 50.0% | |
!! | ACTGCAACAGAGAAGCACCA+CGG | - | chr8_2:30133257-30133276 | None:intergenic | 50.0% |
GCAGTGATGTCTGCCATAAG+TGG | + | chr8_2:30133272-30133291 | Msa1243640:intron | 50.0% | |
GTCTGCCATAAGTGGTCTAC+AGG | + | chr8_2:30133280-30133299 | Msa1243640:CDS | 50.0% | |
TCACATGCTGTCAGACCTCT+CGG | + | chr8_2:30133661-30133680 | Msa1243640:intron | 50.0% | |
TTGCCTCAGTAGGTCGACTA+TGG | + | chr8_2:30133943-30133962 | Msa1243640:intron | 50.0% | |
CAACCATAGTCGACCTACTG+AGG | - | chr8_2:30133949-30133968 | None:intergenic | 50.0% | |
GAATGCTGAACAAAGCCACG+AGG | - | chr8_2:30134237-30134256 | None:intergenic | 50.0% | |
!! | ACAGTTCGGTACTGGCAAAG+TGG | + | chr8_2:30134258-30134277 | Msa1243640:CDS | 50.0% |
!! | CAGTTCGGTACTGGCAAAGT+GGG | + | chr8_2:30134259-30134278 | Msa1243640:CDS | 50.0% |
TCGCCCCTGTACTTGCTTTA+TGG | + | chr8_2:30134290-30134309 | Msa1243640:CDS | 50.0% | |
CTTGGCCCATATAAGCAAGG+AGG | - | chr8_2:30134852-30134871 | None:intergenic | 50.0% | |
CAGCTTGGCCCATATAAGCA+AGG | - | chr8_2:30134855-30134874 | None:intergenic | 50.0% | |
ACGGTCCTTCAAACTACCGA+CGG | + | chr8_2:30134960-30134979 | Msa1243640:intron | 50.0% | |
ACTGACCGTCGGTAGTTTGA+AGG | - | chr8_2:30134968-30134987 | None:intergenic | 50.0% | |
CAACACAGAGCACAAACAGC+AGG | - | chr8_2:30135193-30135212 | None:intergenic | 50.0% | |
! | GATGATGGTTAGCACCACCT+TGG | + | chr8_2:30135698-30135717 | Msa1243640:CDS | 50.0% |
!! | CGAAAATTTTCGAGGGTGGC+TGG | + | chr8_2:30135826-30135845 | Msa1243640:CDS | 50.0% |
TCCTCTCCGTGATGTATACG+TGG | + | chr8_2:30135874-30135893 | Msa1243640:CDS | 50.0% | |
TCCACGTATACATCACGGAG+AGG | - | chr8_2:30135878-30135897 | None:intergenic | 50.0% | |
!! | GGAGTGTCTTGAAGTACCGA+AGG | + | chr8_2:30135904-30135923 | Msa1243640:CDS | 50.0% |
GGAAAATGGAGGGAACACCT+TGG | - | chr8_2:30136031-30136050 | None:intergenic | 50.0% | |
GAAGGCTTAGAAGGAACTGC+AGG | - | chr8_2:30136052-30136071 | None:intergenic | 50.0% | |
GAAGAGCTGGAAGGCTTAGA+AGG | - | chr8_2:30136061-30136080 | None:intergenic | 50.0% | |
! | TTCCGCTGTGTTGCTAGGTA+CGG | + | chr8_2:30136185-30136204 | Msa1243640:CDS | 50.0% |
AACCGTACCTAGCAACACAG+CGG | - | chr8_2:30136190-30136209 | None:intergenic | 50.0% | |
CGGTTACAAAGACGTTCGGA+AGG | + | chr8_2:30136205-30136224 | Msa1243640:CDS | 50.0% | |
GTTAGAAGCTGCGTTGGAGT+TGG | + | chr8_2:30136292-30136311 | Msa1243640:CDS | 50.0% | |
TGTTGACGCACCTTCATGTG+AGG | - | chr8_2:30136453-30136472 | None:intergenic | 50.0% | |
! | CTTTTCCCGTCAGCGATGAT+TGG | + | chr8_2:30136829-30136848 | Msa1243640:three_prime_UTR | 50.0% |
! | GTGGTGGGAGTAGTGAGTCT+AGG | + | chr8_2:30130705-30130724 | Msa1243640:CDS | 55.0% |
GTGGGAGTAGTGAGTCTAGG+TGG | + | chr8_2:30130708-30130727 | Msa1243640:CDS | 55.0% | |
CCTAGCACGTCAAATGTCCC+CGG | - | chr8_2:30131029-30131048 | None:intergenic | 55.0% | |
CGGGGACATTTGACGTGCTA+GGG | + | chr8_2:30131027-30131046 | Msa1243640:intron | 55.0% | |
! | CCCACAGAGGAGACTTGGTA+TGG | - | chr8_2:30133046-30133065 | None:intergenic | 55.0% |
CACATGCTGTCAGACCTCTC+GGG | + | chr8_2:30133662-30133681 | Msa1243640:intron | 55.0% | |
AGTGCATGGTCAGCTCTTGG+TGG | + | chr8_2:30134424-30134443 | Msa1243640:CDS | 55.0% | |
GTCGGTAGTTTGAAGGACCG+TGG | - | chr8_2:30134961-30134980 | None:intergenic | 55.0% | |
!! | GGAAGCGTTAGAAGCTGCGT+TGG | + | chr8_2:30136286-30136305 | Msa1243640:CDS | 55.0% |
AGAAGCTGCGTTGGAGTTGG+AGG | + | chr8_2:30136295-30136314 | Msa1243640:CDS | 55.0% | |
GAAGCTGCGTTGGAGTTGGA+GGG | + | chr8_2:30136296-30136315 | Msa1243640:CDS | 55.0% | |
CCGGGGACATTTGACGTGCT+AGG | + | chr8_2:30131026-30131045 | Msa1243640:intron | 60.0% | |
!! | GCCCTTTCGAGTTCTGGCGT+AGG | - | chr8_2:30132614-30132633 | None:intergenic | 60.0% |
GCATCCCCACAGAGGAGACT+TGG | - | chr8_2:30133051-30133070 | None:intergenic | 60.0% | |
CCACAACTGCATCCCCACAG+AGG | - | chr8_2:30133059-30133078 | None:intergenic | 60.0% | |
CCTCTGTGGGGATGCAGTTG+TGG | + | chr8_2:30133056-30133075 | Msa1243640:intron | 60.0% | |
!! | TGGCTTTGGGATGCTTCCCC+AGG | + | chr8_2:30135317-30135336 | Msa1243640:CDS | 60.0% |
! | TGATGGTGTGGACACCGCCT+CGG | + | chr8_2:30136328-30136347 | Msa1243640:CDS | 60.0% |
! | CATCTGGAGCGTGACCCGAG+AGG | - | chr8_2:30133679-30133698 | None:intergenic | 65.0% |
TGGTGTGGACACCGCCTCGG+TGG | + | chr8_2:30136331-30136350 | Msa1243640:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 30130465 | 30137000 | 30130465 | ID=Msa1243640;Name=Msa1243640 |
chr8_2 | mRNA | 30130465 | 30137000 | 30130465 | ID=Msa1243640-mRNA-1;Parent=Msa1243640;Name=Msa1243640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=188|1|1|1|1|1|9|264|840 |
chr8_2 | exon | 30130465 | 30130904 | 30130465 | ID=Msa1243640-mRNA-1:exon:10160;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30132196 | 30132424 | 30132196 | ID=Msa1243640-mRNA-1:exon:10161;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30132504 | 30132752 | 30132504 | ID=Msa1243640-mRNA-1:exon:10162;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30133276 | 30133326 | 30133276 | ID=Msa1243640-mRNA-1:exon:10163;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30134206 | 30134466 | 30134206 | ID=Msa1243640-mRNA-1:exon:10164;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30134661 | 30134713 | 30134661 | ID=Msa1243640-mRNA-1:exon:10165;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30134817 | 30134931 | 30134817 | ID=Msa1243640-mRNA-1:exon:10166;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30135218 | 30135472 | 30135218 | ID=Msa1243640-mRNA-1:exon:10167;Parent=Msa1243640-mRNA-1 |
chr8_2 | exon | 30135679 | 30137000 | 30135679 | ID=Msa1243640-mRNA-1:exon:10168;Parent=Msa1243640-mRNA-1 |
chr8_2 | five_prime_UTR | 30130465 | 30130652 | 30130465 | ID=Msa1243640-mRNA-1:five_prime_utr;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30130653 | 30130904 | 30130653 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30132196 | 30132424 | 30132196 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30132504 | 30132752 | 30132504 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30133276 | 30133326 | 30133276 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30134206 | 30134466 | 30134206 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30134661 | 30134713 | 30134661 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30134817 | 30134931 | 30134817 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30135218 | 30135472 | 30135218 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | CDS | 30135679 | 30136736 | 30135679 | ID=Msa1243640-mRNA-1:cds;Parent=Msa1243640-mRNA-1 |
chr8_2 | three_prime_UTR | 30136737 | 30137000 | 30136737 | ID=Msa1243640-mRNA-1:three_prime_utr;Parent=Msa1243640-mRNA-1 |
Gene Sequence |
Protein sequence |