Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306470 | XP_013447061.1 | 99.194 | 992 | 8 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2027 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306470 | A0A072TW30 | 99.194 | 992 | 8 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2027 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1306470 | Msa1449780 | 0.965402 | 1.475065e-124 | -8.615850e-47 |
| Msa1306470 | Msa1462740 | 0.960448 | 1.439338e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306470 | MtrunA17_Chr8g0387111 | 99.194 | 992 | 8 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2027 |
| Msa1306470 | MtrunA17_Chr3g0079761 | 36.384 | 874 | 488 | 18 | 142 | 988 | 157 | 989 | 9.89e-179 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306470 | AT4G23440.2 | 62.714 | 995 | 321 | 17 | 8 | 992 | 7 | 961 | 0.0 | 1230 |
| Msa1306470 | AT4G23440.1 | 62.714 | 995 | 321 | 17 | 8 | 992 | 7 | 961 | 0.0 | 1230 |
| Msa1306470 | AT5G56220.2 | 35.984 | 981 | 538 | 21 | 28 | 988 | 63 | 973 | 0.0 | 589 |
| Msa1306470 | AT5G56220.1 | 35.984 | 981 | 538 | 21 | 28 | 988 | 63 | 973 | 0.0 | 589 |
Find 198 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATGATGATTGCTATTC+TGG | 0.168986 | 8_4:-1422727 | Msa1306470:CDS |
| ATTCTTGTTGCTAGGCTCTT+AGG | 0.170857 | 8_4:+1420978 | None:intergenic |
| TGGATCTTCTCCCTCGTTTC+GGG | 0.175608 | 8_4:-1421376 | Msa1306470:CDS |
| CTTCAAGGGCATCCTGTTTA+TGG | 0.176325 | 8_4:+1421106 | None:intergenic |
| CTTTGGCAGCAATGAGTTTA+AGG | 0.176701 | 8_4:-1423053 | Msa1306470:CDS |
| TTGGAGAAAACAAGTATAAA+AGG | 0.233678 | 8_4:-1421524 | Msa1306470:CDS |
| CTCAGTTGAATCCTTGTCTT+TGG | 0.246198 | 8_4:-1420347 | Msa1306470:CDS |
| TTCAGCTCCTCAATGGTATA+TGG | 0.272131 | 8_4:+1422400 | None:intergenic |
| ATGGATCTTCTCCCTCGTTT+CGG | 0.280352 | 8_4:-1421377 | Msa1306470:CDS |
| AAGAGTCTGCTTGGTGTTAT+AGG | 0.281040 | 8_4:+1421134 | None:intergenic |
| ATAGCACCATCTTGTATCTT+TGG | 0.281416 | 8_4:+1421633 | None:intergenic |
| CTAAAACTTTCATACTTATC+TGG | 0.290288 | 8_4:-1421296 | Msa1306470:CDS |
| GCTCTTCGATGTTTGTTTCT+CGG | 0.293083 | 8_4:-1421021 | Msa1306470:CDS |
| CGGGACCAAATTCTTCTTGC+TGG | 0.301223 | 8_4:+1422369 | None:intergenic |
| ATGAAAGAAATGAAAGTAGT+AGG | 0.301352 | 8_4:-1421880 | Msa1306470:CDS |
| TTTCTCCAGCAAGAAGAATT+TGG | 0.305624 | 8_4:-1422374 | Msa1306470:CDS |
| GTTTGATGAGTTCATTGAAT+TGG | 0.311310 | 8_4:+1420727 | None:intergenic |
| TTCCTCCACCTTTGGACCTT+TGG | 0.313442 | 8_4:-1423070 | Msa1306470:CDS |
| AAATGACACGACGACGTTCT+TGG | 0.317499 | 8_4:+1422973 | None:intergenic |
| TCGCCGAGCATTTGAGAAAA+TGG | 0.318891 | 8_4:-1422099 | Msa1306470:CDS |
| TCTGACTCCTTCCACAAAAC+TGG | 0.337643 | 8_4:+1421845 | None:intergenic |
| TCTCCAGCTGCCTGTACTTC+AGG | 0.338303 | 8_4:-1422823 | Msa1306470:CDS |
| GCATGTGTATCAGGAGATTC+AGG | 0.348944 | 8_4:-1421701 | Msa1306470:CDS |
| CAACTGAGCATTAGTTTGAA+TGG | 0.353807 | 8_4:+1420362 | None:intergenic |
| AAAGGTATTGCATGTGTATC+AGG | 0.354608 | 8_4:-1421710 | Msa1306470:CDS |
| CTCTGCAATGACAAGCTTGT+TGG | 0.357217 | 8_4:+1422483 | None:intergenic |
| GCTAGGAAAAGAGAAGTTAT+TGG | 0.361654 | 8_4:-1420699 | Msa1306470:CDS |
| ATTCTGTCATTTGAAGCTTC+AGG | 0.363962 | 8_4:+1422934 | None:intergenic |
| GCTATGGACGTTGCTTCTTT+CGG | 0.373927 | 8_4:-1422457 | Msa1306470:CDS |
| AGAGGGGCACAATTTGATAT+AGG | 0.375105 | 8_4:-1420267 | Msa1306470:CDS |
| ATCTCTAGTAGCACCATATC+TGG | 0.376967 | 8_4:-1422760 | Msa1306470:CDS |
| GGACTCAGATCAAAGTATAT+CGG | 0.382250 | 8_4:+1422349 | None:intergenic |
| GTCCATTTGATTGTCTTGTA+AGG | 0.382998 | 8_4:-1422330 | Msa1306470:CDS |
| AAAATGGAAAGAGAAAATTA+AGG | 0.383247 | 8_4:-1422083 | Msa1306470:CDS |
| GCAAGTGCTAACAATGAAAC+TGG | 0.387890 | 8_4:+1420918 | None:intergenic |
| GAAGAAAGTTCCTCCACCTT+TGG | 0.391834 | 8_4:-1423078 | Msa1306470:CDS |
| TTCTTGTTGCTAGGCTCTTA+GGG | 0.392871 | 8_4:+1420979 | None:intergenic |
| GTATCAGGAGATTCAGGAAT+TGG | 0.394294 | 8_4:-1421695 | Msa1306470:CDS |
| GTAAAGAAGCTCACGCCTTC+CGG | 0.394828 | 8_4:-1421064 | Msa1306470:CDS |
| GAATATGTCTTCGTCGTCTT+CGG | 0.397426 | 8_4:-1423031 | Msa1306470:CDS |
| AAGGGATATAATTGAGAAAA+GGG | 0.399396 | 8_4:-1422311 | Msa1306470:CDS |
| CCTTCCTCGCGTCATGAACT+TGG | 0.399410 | 8_4:-1421324 | Msa1306470:CDS |
| TCTTGTGATCATTGATAACT+TGG | 0.400919 | 8_4:-1421435 | Msa1306470:CDS |
| TAACTCGGCACACAACCATT+TGG | 0.407147 | 8_4:+1422558 | None:intergenic |
| TCCAGAATAGCAATCATCAT+AGG | 0.409912 | 8_4:+1422726 | None:intergenic |
| AAGCTTGGAAGGTTAACTTT+AGG | 0.410083 | 8_4:-1421191 | Msa1306470:CDS |
| TGAGAAAAGGGGTGAGTTGT+GGG | 0.412661 | 8_4:-1422299 | Msa1306470:CDS |
| TAAGGGATATAATTGAGAAA+AGG | 0.414196 | 8_4:-1422312 | Msa1306470:CDS |
| TGAAAGAAATGAAAGTAGTA+GGG | 0.416453 | 8_4:-1421879 | Msa1306470:CDS |
| TGTGAGTGTTGAGAATAGTT+TGG | 0.416592 | 8_4:-1421543 | Msa1306470:CDS |
| AGGGTCAATATCTCAACATC+TGG | 0.421115 | 8_4:-1420640 | Msa1306470:CDS |
| CCCTCTCTCGGGTCGAAGAA+TGG | 0.421987 | 8_4:-1422207 | Msa1306470:CDS |
| CGACCGGTGTAACTAATGTT+TGG | 0.427622 | 8_4:+1420418 | None:intergenic |
| GAGGGGCACAATTTGATATA+GGG | 0.428606 | 8_4:-1420266 | Msa1306470:CDS |
| ACTTTAGGCCTCGCCATCAT+TGG | 0.441337 | 8_4:-1421176 | Msa1306470:CDS |
| GAAAGAGAAAATTAAGGAAG+AGG | 0.442204 | 8_4:-1422077 | Msa1306470:CDS |
| TGGAAGCTCAGGATGGAAAC+TGG | 0.442332 | 8_4:-1422180 | Msa1306470:CDS |
| CTCAACATCTGGATCATTTG+TGG | 0.442767 | 8_4:-1420629 | Msa1306470:CDS |
| AATGCTCGGCGACACTTCTT+CGG | 0.444558 | 8_4:+1422110 | None:intergenic |
| ATGCTGTCCATGCCCTCTCT+CGG | 0.444658 | 8_4:-1422219 | Msa1306470:CDS |
| TCAGTTGCTTTGTATCAGAT+AGG | 0.444844 | 8_4:-1422522 | Msa1306470:CDS |
| GCAGAAGAAAAGTGTTCTTC+CGG | 0.448634 | 8_4:+1421045 | None:intergenic |
| CCATGAAGACATCTCCTTCA+AGG | 0.448705 | 8_4:+1421091 | None:intergenic |
| CTCAGCGGCACTACCGTTCG+AGG | 0.456839 | 8_4:-1421790 | Msa1306470:CDS |
| GGAAGTGAAACCACAGGTTA+AGG | 0.459113 | 8_4:+1420836 | None:intergenic |
| CTGCATATCACCTGAAGTAC+AGG | 0.462098 | 8_4:+1422813 | None:intergenic |
| AAGATAAGGGAACTTGTTTG+TGG | 0.464392 | 8_4:-1420875 | Msa1306470:CDS |
| TGATAAAATTCCACCAATGA+TGG | 0.465348 | 8_4:+1421163 | None:intergenic |
| AAAGAAAGAGCTTTCTCAGT+TGG | 0.467486 | 8_4:-1422017 | Msa1306470:CDS |
| TCAACATCTGGATCATTTGT+GGG | 0.472212 | 8_4:-1420628 | Msa1306470:CDS |
| GACTCAGATCAAAGTATATC+GGG | 0.474481 | 8_4:+1422350 | None:intergenic |
| CCTTGAAGGAGATGTCTTCA+TGG | 0.475454 | 8_4:-1421091 | Msa1306470:CDS |
| TGCTGTCCATGCCCTCTCTC+GGG | 0.476784 | 8_4:-1422218 | Msa1306470:CDS |
| CATAAACAGGATGCCCTTGA+AGG | 0.483188 | 8_4:-1421105 | Msa1306470:CDS |
| GGGATGGCAGTAACCAGATA+TGG | 0.485467 | 8_4:+1422747 | None:intergenic |
| AATTTGTGGTGATGATCATC+CGG | 0.486755 | 8_4:-1420205 | Msa1306470:CDS |
| ACTTGGAAAGCGAAACTGAT+TGG | 0.486832 | 8_4:-1421418 | Msa1306470:CDS |
| TCCCTTACAAGACAATCAAA+TGG | 0.489954 | 8_4:+1422328 | None:intergenic |
| AAAAGAAGGCATTTGACCAT+TGG | 0.490531 | 8_4:-1421926 | Msa1306470:CDS |
| AACGCAGTGGTAAGTATAGT+AGG | 0.491664 | 8_4:-1421763 | Msa1306470:CDS |
| CCTCGAGCTCGACAACCGTT+GGG | 0.492301 | 8_4:+1420571 | None:intergenic |
| CAAGTACCATTCTTGTTGCT+AGG | 0.494073 | 8_4:+1420970 | None:intergenic |
| GACTCTTAGATACCATAAAC+AGG | 0.496175 | 8_4:-1421118 | Msa1306470:CDS |
| TTAGGCCTCGCCATCATTGG+TGG | 0.497790 | 8_4:-1421173 | Msa1306470:CDS |
| AGAATGGAAGTTGGAAGCTC+AGG | 0.498559 | 8_4:-1422191 | Msa1306470:CDS |
| TTGAGAAAAGGGGTGAGTTG+TGG | 0.498606 | 8_4:-1422300 | Msa1306470:CDS |
| TATTGGATCTTCACATGCAA+TGG | 0.498885 | 8_4:-1420682 | Msa1306470:CDS |
| CAATGAAACTGGAATGGGAC+TGG | 0.502774 | 8_4:+1420929 | None:intergenic |
| GAGCTAAGCTTATGCTAAGA+GGG | 0.503364 | 8_4:-1420284 | Msa1306470:CDS |
| ACATTGTTAGCAATGAGGTT+AGG | 0.503511 | 8_4:-1422133 | Msa1306470:CDS |
| TCCATTTGATTGTCTTGTAA+GGG | 0.506586 | 8_4:-1422329 | Msa1306470:CDS |
| AAAGAGAGGCGAAGTAAGAA+AGG | 0.508110 | 8_4:-1422700 | Msa1306470:CDS |
| GCAAGATTATATTGAACTCA+AGG | 0.511718 | 8_4:-1421957 | Msa1306470:CDS |
| TTTATCAGGAGTTCAATTTG+TGG | 0.512741 | 8_4:-1420219 | Msa1306470:CDS |
| TTTGTATGGAGGGTTGAAGC+AGG | 0.513984 | 8_4:-1422251 | Msa1306470:CDS |
| ATGGTATCTAAGAGTCTGCT+TGG | 0.515528 | 8_4:+1421125 | None:intergenic |
| AGAACAATTGAGGAGAAGCT+TGG | 0.520523 | 8_4:-1421206 | Msa1306470:CDS |
| ACCTCGAGCTCGACAACCGT+TGG | 0.521798 | 8_4:+1420570 | None:intergenic |
| CAAGCTTGTCATTGCAGAGA+AGG | 0.522391 | 8_4:-1422479 | Msa1306470:CDS |
| TAGGAAGAAAAGAGGAGTGA+AGG | 0.522607 | 8_4:-1421744 | Msa1306470:CDS |
| TAGTTACACCGGTCGATAAG+TGG | 0.525503 | 8_4:-1420410 | Msa1306470:CDS |
| TCACCTGAAGTACAGGCAGC+TGG | 0.525786 | 8_4:+1422820 | None:intergenic |
| TTGGAAAATCTTACAAGAGG+AGG | 0.526110 | 8_4:+1422577 | None:intergenic |
| AGAGCTAAGCTTATGCTAAG+AGG | 0.526272 | 8_4:-1420285 | Msa1306470:CDS |
| TGCTAACAATGAAACTGGAA+TGG | 0.528855 | 8_4:+1420923 | None:intergenic |
| CAGTTGCTTTGTATCAGATA+GGG | 0.529154 | 8_4:-1422521 | Msa1306470:CDS |
| AAGGCATTTGACCATTGGTA+GGG | 0.530952 | 8_4:-1421921 | Msa1306470:CDS |
| AGCAAAACTATCTAAACCTC+AGG | 0.532436 | 8_4:-1421583 | Msa1306470:CDS |
| TCGGTATTTGATCACGCAGA+CGG | 0.535576 | 8_4:-1421002 | Msa1306470:CDS |
| AAGTATAGTAGGAAGAAAAG+AGG | 0.535877 | 8_4:-1421752 | Msa1306470:CDS |
| TGCTAAGTTTCAACATTGCA+AGG | 0.536485 | 8_4:-1420773 | Msa1306470:CDS |
| TCGCGAGCAAATATAGTATC+CGG | 0.536849 | 8_4:+1420186 | None:intergenic |
| ACAAGAATGGTACTTGTAAG+TGG | 0.537495 | 8_4:-1420963 | Msa1306470:CDS |
| GAAGGCATTTGACCATTGGT+AGG | 0.538042 | 8_4:-1421922 | Msa1306470:CDS |
| TCAAGGCAAGATCGAAAAGA+AGG | 0.541335 | 8_4:-1421940 | Msa1306470:CDS |
| GGTTCGACAAATCACTCTGT+TGG | 0.544300 | 8_4:-1420389 | Msa1306470:CDS |
| TCGGGTCGAAGAATGGAAGT+TGG | 0.544406 | 8_4:-1422200 | Msa1306470:CDS |
| CTTAAACTCATTGCTGCCAA+AGG | 0.548486 | 8_4:+1423054 | None:intergenic |
| CAAGAATCCATATACCATTG+AGG | 0.550407 | 8_4:-1422407 | Msa1306470:CDS |
| TGATGCTCTGAGAACAATTG+AGG | 0.550856 | 8_4:-1421216 | Msa1306470:CDS |
| TGTGCCGAGTTAGAAATTCA+CGG | 0.551801 | 8_4:-1422547 | Msa1306470:CDS |
| CATGAAGACATCTCCTTCAA+GGG | 0.552668 | 8_4:+1421092 | None:intergenic |
| AACTCATCAAACTATATGCT+AGG | 0.554120 | 8_4:-1420716 | Msa1306470:CDS |
| CCAGAATAGCAATCATCATA+GGG | 0.554735 | 8_4:+1422727 | None:intergenic |
| TACCTACCGAGGAAGATATA+CGG | 0.554833 | 8_4:+1422782 | None:intergenic |
| CCCAACGGTTGTCGAGCTCG+AGG | 0.556046 | 8_4:-1420571 | Msa1306470:CDS |
| GCTAACAATGAAACTGGAAT+GGG | 0.556645 | 8_4:+1420924 | None:intergenic |
| TTGTCGAACCACTTATCGAC+CGG | 0.556695 | 8_4:+1420402 | None:intergenic |
| GATCTTCTCCCTCGTTTCGG+GGG | 0.560904 | 8_4:-1421374 | Msa1306470:CDS |
| GAATGGTACTTGTAAGTGGA+TGG | 0.561504 | 8_4:-1420959 | Msa1306470:CDS |
| GCAAGGAGTAGTGCTAAGAA+AGG | 0.562153 | 8_4:-1420756 | Msa1306470:CDS |
| CCAAGTTCATGACGCGAGGA+AGG | 0.563882 | 8_4:+1421324 | None:intergenic |
| TTATCAATGATCACAAGATA+CGG | 0.565478 | 8_4:+1421440 | None:intergenic |
| AAAGATACAAGATGGTGCTA+TGG | 0.566971 | 8_4:-1421631 | Msa1306470:CDS |
| CACTGCGTTTGAGCCTCGAA+CGG | 0.567140 | 8_4:+1421777 | None:intergenic |
| GTTCAAGCTGTGATCAGTCA+AGG | 0.567298 | 8_4:-1420660 | Msa1306470:CDS |
| CTTCGACCCGAGAGAGGGCA+TGG | 0.567829 | 8_4:+1422212 | None:intergenic |
| TGTCATTGCAGAGAAGGCTA+TGG | 0.569419 | 8_4:-1422473 | Msa1306470:CDS |
| CAATTGAGGAGAAGCTTGGA+AGG | 0.570671 | 8_4:-1421202 | Msa1306470:CDS |
| GGATCTTCTCCCTCGTTTCG+GGG | 0.572302 | 8_4:-1421375 | Msa1306470:CDS |
| AAATCATCGTCAACACCACC+AGG | 0.574336 | 8_4:-1422667 | Msa1306470:CDS |
| TATGGATAGGAGGGGAGAGT+AGG | 0.575704 | 8_4:-1421613 | Msa1306470:CDS |
| AAGATGGTGCTATGGATAGG+AGG | 0.577115 | 8_4:-1421623 | Msa1306470:CDS |
| ATGGAGGGTTGAAGCAGGAG+TGG | 0.578790 | 8_4:-1422246 | Msa1306470:CDS |
| GCGACTGTGCACGAATGCAT+TGG | 0.579329 | 8_4:-1420451 | Msa1306470:CDS |
| TGCCAAAGGTCCAAAGGTGG+AGG | 0.581637 | 8_4:+1423068 | None:intergenic |
| AAATTCTCGTTACGAGTGAA+AGG | 0.582272 | 8_4:+1422049 | None:intergenic |
| ATGAAAGATTGAATTGCAAG+AGG | 0.582620 | 8_4:+1420510 | None:intergenic |
| TAAGAGCCTAGCAACAAGAA+TGG | 0.586399 | 8_4:-1420976 | Msa1306470:CDS |
| TGTTCTCAGAGCATCAATCT+CGG | 0.587363 | 8_4:+1421223 | None:intergenic |
| TGGAAAGCGAAACTGATTGG+TGG | 0.587808 | 8_4:-1421415 | Msa1306470:CDS |
| ACTACTCTTGCCCCTACCAA+TGG | 0.588157 | 8_4:+1421910 | None:intergenic |
| AAGAAATGAAAGTAGTAGGG+AGG | 0.588494 | 8_4:-1421876 | Msa1306470:CDS |
| CATTGCTGCCAAAGGTCCAA+AGG | 0.589320 | 8_4:+1423062 | None:intergenic |
| TACAAGATGGTGCTATGGAT+AGG | 0.589655 | 8_4:-1421626 | Msa1306470:CDS |
| CCATTCTTCGACCCGAGAGA+GGG | 0.592544 | 8_4:+1422207 | None:intergenic |
| GGAAAGCGAAACTGATTGGT+GGG | 0.593200 | 8_4:-1421414 | Msa1306470:CDS |
| CTTGTTGGAGTTCTTACATG+AGG | 0.593869 | 8_4:+1422498 | None:intergenic |
| TTGCTAAAATCCTTAACCTG+TGG | 0.594864 | 8_4:-1420846 | Msa1306470:CDS |
| TCCATTCTTCGACCCGAGAG+AGG | 0.598096 | 8_4:+1422206 | None:intergenic |
| AGATGGTGCTATGGATAGGA+GGG | 0.600346 | 8_4:-1421622 | Msa1306470:CDS |
| TTCCACTAGCACAAGTTCAG+TGG | 0.605218 | 8_4:-1422887 | Msa1306470:CDS |
| CTGTCACATTGTTAGCAATG+AGG | 0.606008 | 8_4:-1422138 | Msa1306470:CDS |
| GTGGGATCACAAACTTGTGA+TGG | 0.606105 | 8_4:-1421396 | Msa1306470:CDS |
| ATTTCACCAAAGATACAAGA+TGG | 0.608975 | 8_4:-1421639 | Msa1306470:CDS |
| GAAGAAATTGATCTTGAACC+TGG | 0.609449 | 8_4:+1422649 | None:intergenic |
| AAGAAAAGTGTTCTTCCGGA+AGG | 0.610560 | 8_4:+1421049 | None:intergenic |
| AGGCATTTGACCATTGGTAG+GGG | 0.611585 | 8_4:-1421920 | Msa1306470:CDS |
| TGAATTCGGTCATAACCCAA+CGG | 0.611965 | 8_4:-1420586 | Msa1306470:CDS |
| ACTGTGTAGTCCTTTCCACT+TGG | 0.612402 | 8_4:+1421248 | None:intergenic |
| AACCACTGAACTTGTGCTAG+TGG | 0.612612 | 8_4:+1422885 | None:intergenic |
| TGCTGCCAAAGGTCCAAAGG+TGG | 0.618531 | 8_4:+1423065 | None:intergenic |
| GCTAGCTCTTGCCAAAGACA+AGG | 0.621668 | 8_4:+1420336 | None:intergenic |
| CATTACATACTCTCGATGCA+CGG | 0.622301 | 8_4:-1420490 | Msa1306470:CDS |
| TCTAATGTTACCAAGTGGAA+AGG | 0.624824 | 8_4:-1421258 | Msa1306470:CDS |
| AATAGCAATCATCATAGGGA+TGG | 0.625907 | 8_4:+1422731 | None:intergenic |
| AGCTAAGCTTATGCTAAGAG+GGG | 0.632426 | 8_4:-1420283 | Msa1306470:CDS |
| CATTTGGAAAATCTTACAAG+AGG | 0.633450 | 8_4:+1422574 | None:intergenic |
| AAAATGTACTATCTCTGATG+TGG | 0.634287 | 8_4:-1422854 | Msa1306470:CDS |
| GCTATTCTGGACAGAAAGAG+AGG | 0.635947 | 8_4:-1422714 | Msa1306470:CDS |
| ATGTCTCTAATGTTACCAAG+TGG | 0.638020 | 8_4:-1421263 | Msa1306470:CDS |
| AGGGATATAATTGAGAAAAG+GGG | 0.638282 | 8_4:-1422310 | Msa1306470:CDS |
| TGGAAGTTGGAAGCTCAGGA+TGG | 0.639529 | 8_4:-1422187 | Msa1306470:CDS |
| TTCAAGCTGTGATCAGTCAA+GGG | 0.645263 | 8_4:-1420659 | Msa1306470:CDS |
| AAATTCCACCAATGATGGCG+AGG | 0.646339 | 8_4:+1421168 | None:intergenic |
| ACTCGACCGTATATCTTCCT+CGG | 0.647338 | 8_4:-1422788 | Msa1306470:CDS |
| GATGGTGCTATGGATAGGAG+GGG | 0.647894 | 8_4:-1421621 | Msa1306470:CDS |
| AGCTCTAGTCTCAAGTACTG+TGG | 0.651245 | 8_4:+1420302 | None:intergenic |
| GGTTCCAAGTTCATGACGCG+AGG | 0.663662 | 8_4:+1421320 | None:intergenic |
| CAGTCGCAAGAGCTCGAGAG+CGG | 0.665433 | 8_4:+1420467 | None:intergenic |
| TGACCAAACATTAGTTACAC+CGG | 0.668297 | 8_4:-1420421 | Msa1306470:CDS |
| GATACCGTGAATTTCTAACT+CGG | 0.676357 | 8_4:+1422543 | None:intergenic |
| CGTTCGAGGCTCAAACGCAG+TGG | 0.676565 | 8_4:-1421776 | Msa1306470:CDS |
| GACCGTATATCTTCCTCGGT+AGG | 0.682935 | 8_4:-1422784 | Msa1306470:CDS |
| GTGTGGGGAAGTGAAACCAC+AGG | 0.689259 | 8_4:+1420830 | None:intergenic |
| GAAATTGATCTTGAACCTGG+TGG | 0.697443 | 8_4:+1422652 | None:intergenic |
| GCTACTAGAGATACCTACCG+AGG | 0.736879 | 8_4:+1422771 | None:intergenic |
| AAAGTGTTGAGTTTGCTCAG+CGG | 0.754231 | 8_4:-1421805 | Msa1306470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGGAAAGAGAAAATTA+AGG | - | chr8_4:1421141-1421160 | Msa1306470:CDS | 20.0% |
| !!! | TGTTTTCTGTTATTTGAATT+CGG | - | chr8_4:1422624-1422643 | Msa1306470:CDS | 20.0% |
| !! | ATGTTTTCATTGGATTACAT+GGG | - | chr8_4:1420618-1420637 | Msa1306470:CDS | 25.0% |
| ! | TAAGGGATATAATTGAGAAA+AGG | - | chr8_4:1420912-1420931 | Msa1306470:CDS | 25.0% |
| ! | AAGGGATATAATTGAGAAAA+GGG | - | chr8_4:1420913-1420932 | Msa1306470:CDS | 25.0% |
| ! | ATGAAAGAAATGAAAGTAGT+AGG | - | chr8_4:1421344-1421363 | Msa1306470:CDS | 25.0% |
| ! | TGAAAGAAATGAAAGTAGTA+GGG | - | chr8_4:1421345-1421364 | Msa1306470:CDS | 25.0% |
| ! | TTGGAGAAAACAAGTATAAA+AGG | - | chr8_4:1421700-1421719 | Msa1306470:CDS | 25.0% |
| ! | TTATCAATGATCACAAGATA+CGG | + | chr8_4:1421787-1421806 | None:intergenic | 25.0% |
| !!! | GATAAGTATGAAAGTTTTAG+CGG | + | chr8_4:1421928-1421947 | None:intergenic | 25.0% |
| ! | CTAAAACTTTCATACTTATC+TGG | - | chr8_4:1421928-1421947 | Msa1306470:CDS | 25.0% |
| ! | AAGATACCGAAAAAAGATAA+GGG | - | chr8_4:1422336-1422355 | Msa1306470:CDS | 25.0% |
| !!! | TGCTTCTAATTCAGATTTTT+TGG | + | chr8_4:1422421-1422440 | None:intergenic | 25.0% |
| ! | AATTGAACTCCTGATAAAAA+TGG | + | chr8_4:1423003-1423022 | None:intergenic | 25.0% |
| ! | GAGATAGTACATTTTTGTTC+TGG | + | chr8_4:1420365-1420384 | None:intergenic | 30.0% |
| AAAATGTACTATCTCTGATG+TGG | - | chr8_4:1420370-1420389 | Msa1306470:CDS | 30.0% | |
| ! | GATGTTTTCATTGGATTACA+TGG | - | chr8_4:1420617-1420636 | Msa1306470:CDS | 30.0% |
| CATTTGGAAAATCTTACAAG+AGG | + | chr8_4:1420653-1420672 | None:intergenic | 30.0% | |
| ! | CTCTTGTAAGATTTTCCAAA+TGG | - | chr8_4:1420651-1420670 | Msa1306470:CDS | 30.0% |
| TCCATTTGATTGTCTTGTAA+GGG | - | chr8_4:1420895-1420914 | Msa1306470:CDS | 30.0% | |
| AGGGATATAATTGAGAAAAG+GGG | - | chr8_4:1420914-1420933 | Msa1306470:CDS | 30.0% | |
| ! | TTTCCATTTTCTCAAATGCT+CGG | + | chr8_4:1421131-1421150 | None:intergenic | 30.0% |
| GAAAGAGAAAATTAAGGAAG+AGG | - | chr8_4:1421147-1421166 | Msa1306470:CDS | 30.0% | |
| ! | ACTCGTAACGAGAATTTTAT+CGG | - | chr8_4:1421181-1421200 | Msa1306470:CDS | 30.0% |
| ! | CAGTTGGAATTTATGCTTTT+TGG | - | chr8_4:1421223-1421242 | Msa1306470:CDS | 30.0% |
| GCAAGATTATATTGAACTCA+AGG | - | chr8_4:1421267-1421286 | Msa1306470:CDS | 30.0% | |
| AAGTATAGTAGGAAGAAAAG+AGG | - | chr8_4:1421472-1421491 | Msa1306470:CDS | 30.0% | |
| ATTTCACCAAAGATACAAGA+TGG | - | chr8_4:1421585-1421604 | Msa1306470:CDS | 30.0% | |
| ! | TCTTGTGATCATTGATAACT+TGG | - | chr8_4:1421789-1421808 | Msa1306470:CDS | 30.0% |
| TGATAAAATTCCACCAATGA+TGG | + | chr8_4:1422064-1422083 | None:intergenic | 30.0% | |
| CAAGATACCGAAAAAAGATA+AGG | - | chr8_4:1422335-1422354 | Msa1306470:CDS | 30.0% | |
| !!! | CAAGTTCCCTTATCTTTTTT+CGG | + | chr8_4:1422345-1422364 | None:intergenic | 30.0% |
| !!! | ATTCAGATTTTTTGGTGTGT+GGG | + | chr8_4:1422413-1422432 | None:intergenic | 30.0% |
| !!! | AATTCAGATTTTTTGGTGTG+TGG | + | chr8_4:1422414-1422433 | None:intergenic | 30.0% |
| GTTTGATGAGTTCATTGAAT+TGG | + | chr8_4:1422500-1422519 | None:intergenic | 30.0% | |
| AACTCATCAAACTATATGCT+AGG | - | chr8_4:1422508-1422527 | Msa1306470:CDS | 30.0% | |
| CTTGTATCTTGTGAAAAAAG+TGG | - | chr8_4:1422686-1422705 | Msa1306470:CDS | 30.0% | |
| ATGAAAGATTGAATTGCAAG+AGG | + | chr8_4:1422717-1422736 | None:intergenic | 30.0% | |
| !!! | TCAAGAAAGCCATTTTTATC+AGG | - | chr8_4:1422991-1423010 | Msa1306470:CDS | 30.0% |
| TTTATCAGGAGTTCAATTTG+TGG | - | chr8_4:1423005-1423024 | Msa1306470:CDS | 30.0% | |
| ! | ATTCTGTCATTTGAAGCTTC+AGG | + | chr8_4:1420293-1420312 | None:intergenic | 35.0% |
| AATAGCAATCATCATAGGGA+TGG | + | chr8_4:1420496-1420515 | None:intergenic | 35.0% | |
| CCAGAATAGCAATCATCATA+GGG | + | chr8_4:1420500-1420519 | None:intergenic | 35.0% | |
| TCCAGAATAGCAATCATCAT+AGG | + | chr8_4:1420501-1420520 | None:intergenic | 35.0% | |
| GAAGAAATTGATCTTGAACC+TGG | + | chr8_4:1420578-1420597 | None:intergenic | 35.0% | |
| ! | ACGAGTTGTGATGTTTTCAT+TGG | - | chr8_4:1420608-1420627 | Msa1306470:CDS | 35.0% |
| TTGGAAAATCTTACAAGAGG+AGG | + | chr8_4:1420650-1420669 | None:intergenic | 35.0% | |
| GATACCGTGAATTTCTAACT+CGG | + | chr8_4:1420684-1420703 | None:intergenic | 35.0% | |
| ! | TCAGTTGCTTTGTATCAGAT+AGG | - | chr8_4:1420702-1420721 | Msa1306470:CDS | 35.0% |
| ! | CAGTTGCTTTGTATCAGATA+GGG | - | chr8_4:1420703-1420722 | Msa1306470:CDS | 35.0% |
| CAAGAATCCATATACCATTG+AGG | - | chr8_4:1420817-1420836 | Msa1306470:CDS | 35.0% | |
| GAAAAATTTCAGCTCCTCAA+TGG | + | chr8_4:1420834-1420853 | None:intergenic | 35.0% | |
| TTTCTCCAGCAAGAAGAATT+TGG | - | chr8_4:1420850-1420869 | Msa1306470:CDS | 35.0% | |
| GACTCAGATCAAAGTATATC+GGG | + | chr8_4:1420877-1420896 | None:intergenic | 35.0% | |
| GGACTCAGATCAAAGTATAT+CGG | + | chr8_4:1420878-1420897 | None:intergenic | 35.0% | |
| GTCCATTTGATTGTCTTGTA+AGG | - | chr8_4:1420894-1420913 | Msa1306470:CDS | 35.0% | |
| TCCCTTACAAGACAATCAAA+TGG | + | chr8_4:1420899-1420918 | None:intergenic | 35.0% | |
| ACATTGTTAGCAATGAGGTT+AGG | - | chr8_4:1421091-1421110 | Msa1306470:CDS | 35.0% | |
| AAATTCTCGTTACGAGTGAA+AGG | + | chr8_4:1421178-1421197 | None:intergenic | 35.0% | |
| AAAGAAAGAGCTTTCTCAGT+TGG | - | chr8_4:1421207-1421226 | Msa1306470:CDS | 35.0% | |
| !!! | ATGCTTTTTGGTGATGTTAC+TGG | - | chr8_4:1421235-1421254 | Msa1306470:CDS | 35.0% |
| !! | AAAAGAAGGCATTTGACCAT+TGG | - | chr8_4:1421298-1421317 | Msa1306470:CDS | 35.0% |
| AAGAAATGAAAGTAGTAGGG+AGG | - | chr8_4:1421348-1421367 | Msa1306470:CDS | 35.0% | |
| !! | AAAGGTATTGCATGTGTATC+AGG | - | chr8_4:1421514-1421533 | Msa1306470:CDS | 35.0% |
| ATAGCACCATCTTGTATCTT+TGG | + | chr8_4:1421594-1421613 | None:intergenic | 35.0% | |
| ! | AAAGATACAAGATGGTGCTA+TGG | - | chr8_4:1421593-1421612 | Msa1306470:CDS | 35.0% |
| AGCAAAACTATCTAAACCTC+AGG | - | chr8_4:1421641-1421660 | Msa1306470:CDS | 35.0% | |
| ! | CAACTTCTAAAAATGACCTG+AGG | + | chr8_4:1421660-1421679 | None:intergenic | 35.0% |
| !! | TGTGAGTGTTGAGAATAGTT+TGG | - | chr8_4:1421681-1421700 | Msa1306470:CDS | 35.0% |
| ATGTCTCTAATGTTACCAAG+TGG | - | chr8_4:1421961-1421980 | Msa1306470:CDS | 35.0% | |
| TCTAATGTTACCAAGTGGAA+AGG | - | chr8_4:1421966-1421985 | Msa1306470:CDS | 35.0% | |
| AAGCTTGGAAGGTTAACTTT+AGG | - | chr8_4:1422033-1422052 | Msa1306470:CDS | 35.0% | |
| GACTCTTAGATACCATAAAC+AGG | - | chr8_4:1422106-1422125 | Msa1306470:CDS | 35.0% | |
| ACAAGAATGGTACTTGTAAG+TGG | - | chr8_4:1422261-1422280 | Msa1306470:CDS | 35.0% | |
| GCTAACAATGAAACTGGAAT+GGG | + | chr8_4:1422303-1422322 | None:intergenic | 35.0% | |
| TGCTAACAATGAAACTGGAA+TGG | + | chr8_4:1422304-1422323 | None:intergenic | 35.0% | |
| ! | AAGATAAGGGAACTTGTTTG+TGG | - | chr8_4:1422349-1422368 | Msa1306470:CDS | 35.0% |
| TTGCTAAAATCCTTAACCTG+TGG | - | chr8_4:1422378-1422397 | Msa1306470:CDS | 35.0% | |
| !!! | TTCAGATTTTTTGGTGTGTG+GGG | + | chr8_4:1422412-1422431 | None:intergenic | 35.0% |
| TGCTAAGTTTCAACATTGCA+AGG | - | chr8_4:1422451-1422470 | Msa1306470:CDS | 35.0% | |
| GCTAGGAAAAGAGAAGTTAT+TGG | - | chr8_4:1422525-1422544 | Msa1306470:CDS | 35.0% | |
| TATTGGATCTTCACATGCAA+TGG | - | chr8_4:1422542-1422561 | Msa1306470:CDS | 35.0% | |
| TCAACATCTGGATCATTTGT+GGG | - | chr8_4:1422596-1422615 | Msa1306470:CDS | 35.0% | |
| TGACCAAACATTAGTTACAC+CGG | - | chr8_4:1422803-1422822 | Msa1306470:CDS | 35.0% | |
| ! | CAACTGAGCATTAGTTTGAA+TGG | + | chr8_4:1422865-1422884 | None:intergenic | 35.0% |
| ! | AATTTGTGGTGATGATCATC+CGG | - | chr8_4:1423019-1423038 | Msa1306470:CDS | 35.0% |
| CTTAAACTCATTGCTGCCAA+AGG | + | chr8_4:1420173-1420192 | None:intergenic | 40.0% | |
| CTTTGGCAGCAATGAGTTTA+AGG | - | chr8_4:1420171-1420190 | Msa1306470:CDS | 40.0% | |
| GAATATGTCTTCGTCGTCTT+CGG | - | chr8_4:1420193-1420212 | Msa1306470:CDS | 40.0% | |
| AGAGAAAAACGGTGACTGAT+TGG | + | chr8_4:1420231-1420250 | None:intergenic | 40.0% | |
| GACGTTCTTGGAGAGAAAAA+CGG | + | chr8_4:1420242-1420261 | None:intergenic | 40.0% | |
| TACCTACCGAGGAAGATATA+CGG | + | chr8_4:1420445-1420464 | None:intergenic | 40.0% | |
| ATCTCTAGTAGCACCATATC+TGG | - | chr8_4:1420464-1420483 | Msa1306470:CDS | 40.0% | |
| ! | CCCTATGATGATTGCTATTC+TGG | - | chr8_4:1420497-1420516 | Msa1306470:CDS | 40.0% |
| AAAGAGAGGCGAAGTAAGAA+AGG | - | chr8_4:1420524-1420543 | Msa1306470:CDS | 40.0% | |
| !!! | GTGGTGTTGACGATGATTTT+TGG | + | chr8_4:1420556-1420575 | None:intergenic | 40.0% |
| GAAATTGATCTTGAACCTGG+TGG | + | chr8_4:1420575-1420594 | None:intergenic | 40.0% | |
| TGTGCCGAGTTAGAAATTCA+CGG | - | chr8_4:1420677-1420696 | Msa1306470:CDS | 40.0% | |
| CTTGTTGGAGTTCTTACATG+AGG | + | chr8_4:1420729-1420748 | None:intergenic | 40.0% | |
| TTCAGCTCCTCAATGGTATA+TGG | + | chr8_4:1420827-1420846 | None:intergenic | 40.0% | |
| AAAAACATGGAGGAGAACTC+TGG | - | chr8_4:1420948-1420967 | Msa1306470:CDS | 40.0% | |
| !!! | AACTCTGGCTTTTGTATGGA+GGG | - | chr8_4:1420963-1420982 | Msa1306470:CDS | 40.0% |
| CTGTCACATTGTTAGCAATG+AGG | - | chr8_4:1421086-1421105 | Msa1306470:CDS | 40.0% | |
| TCAAGGCAAGATCGAAAAGA+AGG | - | chr8_4:1421284-1421303 | Msa1306470:CDS | 40.0% | |
| ! | AAGGCATTTGACCATTGGTA+GGG | - | chr8_4:1421303-1421322 | Msa1306470:CDS | 40.0% |
| ! | AGGAGAAAGAACCAGTTTTG+TGG | - | chr8_4:1421368-1421387 | Msa1306470:CDS | 40.0% |
| !! | GAAAGAACCAGTTTTGTGGA+AGG | - | chr8_4:1421372-1421391 | Msa1306470:CDS | 40.0% |
| !! | AAAGTGTTGAGTTTGCTCAG+CGG | - | chr8_4:1421419-1421438 | Msa1306470:CDS | 40.0% |
| AACGCAGTGGTAAGTATAGT+AGG | - | chr8_4:1421461-1421480 | Msa1306470:CDS | 40.0% | |
| TAGGAAGAAAAGAGGAGTGA+AGG | - | chr8_4:1421480-1421499 | Msa1306470:CDS | 40.0% | |
| !! | AGAGGAGTGAAGGTTTTGTA+TGG | - | chr8_4:1421490-1421509 | Msa1306470:CDS | 40.0% |
| !! | GAGGAGTGAAGGTTTTGTAT+GGG | - | chr8_4:1421491-1421510 | Msa1306470:CDS | 40.0% |
| !! | GTGAAGGTTTTGTATGGGAA+AGG | - | chr8_4:1421496-1421515 | Msa1306470:CDS | 40.0% |
| GTATCAGGAGATTCAGGAAT+TGG | - | chr8_4:1421529-1421548 | Msa1306470:CDS | 40.0% | |
| !! | TACAAGATGGTGCTATGGAT+AGG | - | chr8_4:1421598-1421617 | Msa1306470:CDS | 40.0% |
| ACTTGGAAAGCGAAACTGAT+TGG | - | chr8_4:1421806-1421825 | Msa1306470:CDS | 40.0% | |
| ! | TGTTCTCAGAGCATCAATCT+CGG | + | chr8_4:1422004-1422023 | None:intergenic | 40.0% |
| !! | TGATGCTCTGAGAACAATTG+AGG | - | chr8_4:1422008-1422027 | Msa1306470:CDS | 40.0% |
| AGAACAATTGAGGAGAAGCT+TGG | - | chr8_4:1422018-1422037 | Msa1306470:CDS | 40.0% | |
| !! | AAGAGTCTGCTTGGTGTTAT+AGG | + | chr8_4:1422093-1422112 | None:intergenic | 40.0% |
| ATGGTATCTAAGAGTCTGCT+TGG | + | chr8_4:1422102-1422121 | None:intergenic | 40.0% | |
| CATGAAGACATCTCCTTCAA+GGG | + | chr8_4:1422135-1422154 | None:intergenic | 40.0% | |
| !! | AAGAAAAGTGTTCTTCCGGA+AGG | + | chr8_4:1422178-1422197 | None:intergenic | 40.0% |
| !! | GCAGAAGAAAAGTGTTCTTC+CGG | + | chr8_4:1422182-1422201 | None:intergenic | 40.0% |
| ! | GCTCTTCGATGTTTGTTTCT+CGG | - | chr8_4:1422203-1422222 | Msa1306470:CDS | 40.0% |
| TTCTTGTTGCTAGGCTCTTA+GGG | + | chr8_4:1422248-1422267 | None:intergenic | 40.0% | |
| ATTCTTGTTGCTAGGCTCTT+AGG | + | chr8_4:1422249-1422268 | None:intergenic | 40.0% | |
| TAAGAGCCTAGCAACAAGAA+TGG | - | chr8_4:1422248-1422267 | Msa1306470:CDS | 40.0% | |
| CAAGTACCATTCTTGTTGCT+AGG | + | chr8_4:1422257-1422276 | None:intergenic | 40.0% | |
| GAATGGTACTTGTAAGTGGA+TGG | - | chr8_4:1422265-1422284 | Msa1306470:CDS | 40.0% | |
| GCAAGTGCTAACAATGAAAC+TGG | + | chr8_4:1422309-1422328 | None:intergenic | 40.0% | |
| TTCAAGCTGTGATCAGTCAA+GGG | - | chr8_4:1422565-1422584 | Msa1306470:CDS | 40.0% | |
| AGGGTCAATATCTCAACATC+TGG | - | chr8_4:1422584-1422603 | Msa1306470:CDS | 40.0% | |
| CTCAACATCTGGATCATTTG+TGG | - | chr8_4:1422595-1422614 | Msa1306470:CDS | 40.0% | |
| TGAATTCGGTCATAACCCAA+CGG | - | chr8_4:1422638-1422657 | Msa1306470:CDS | 40.0% | |
| CATTACATACTCTCGATGCA+CGG | - | chr8_4:1422734-1422753 | Msa1306470:CDS | 40.0% | |
| CTCAGTTGAATCCTTGTCTT+TGG | - | chr8_4:1422877-1422896 | Msa1306470:CDS | 40.0% | |
| AGAGCTAAGCTTATGCTAAG+AGG | - | chr8_4:1422939-1422958 | Msa1306470:CDS | 40.0% | |
| GAGCTAAGCTTATGCTAAGA+GGG | - | chr8_4:1422940-1422959 | Msa1306470:CDS | 40.0% | |
| AGCTAAGCTTATGCTAAGAG+GGG | - | chr8_4:1422941-1422960 | Msa1306470:CDS | 40.0% | |
| ! | AGAGGGGCACAATTTGATAT+AGG | - | chr8_4:1422957-1422976 | Msa1306470:CDS | 40.0% |
| ! | GAGGGGCACAATTTGATATA+GGG | - | chr8_4:1422958-1422977 | Msa1306470:CDS | 40.0% |
| TCGCGAGCAAATATAGTATC+CGG | + | chr8_4:1423041-1423060 | None:intergenic | 40.0% | |
| GAAGAAAGTTCCTCCACCTT+TGG | - | chr8_4:1420146-1420165 | Msa1306470:CDS | 45.0% | |
| AAATGACACGACGACGTTCT+TGG | + | chr8_4:1420254-1420273 | None:intergenic | 45.0% | |
| TTCCACTAGCACAAGTTCAG+TGG | - | chr8_4:1420337-1420356 | Msa1306470:CDS | 45.0% | |
| AACCACTGAACTTGTGCTAG+TGG | + | chr8_4:1420342-1420361 | None:intergenic | 45.0% | |
| CTGCATATCACCTGAAGTAC+AGG | + | chr8_4:1420414-1420433 | None:intergenic | 45.0% | |
| ACTCGACCGTATATCTTCCT+CGG | - | chr8_4:1420436-1420455 | Msa1306470:CDS | 45.0% | |
| GCTATTCTGGACAGAAAGAG+AGG | - | chr8_4:1420510-1420529 | Msa1306470:CDS | 45.0% | |
| AAATCATCGTCAACACCACC+AGG | - | chr8_4:1420557-1420576 | Msa1306470:CDS | 45.0% | |
| TAACTCGGCACACAACCATT+TGG | + | chr8_4:1420669-1420688 | None:intergenic | 45.0% | |
| CTCTGCAATGACAAGCTTGT+TGG | + | chr8_4:1420744-1420763 | None:intergenic | 45.0% | |
| CAAGCTTGTCATTGCAGAGA+AGG | - | chr8_4:1420745-1420764 | Msa1306470:CDS | 45.0% | |
| TGTCATTGCAGAGAAGGCTA+TGG | - | chr8_4:1420751-1420770 | Msa1306470:CDS | 45.0% | |
| GCTATGGACGTTGCTTCTTT+CGG | - | chr8_4:1420767-1420786 | Msa1306470:CDS | 45.0% | |
| TTGAGAAAAGGGGTGAGTTG+TGG | - | chr8_4:1420924-1420943 | Msa1306470:CDS | 45.0% | |
| TGAGAAAAGGGGTGAGTTGT+GGG | - | chr8_4:1420925-1420944 | Msa1306470:CDS | 45.0% | |
| GGTGAGTTGTGGGAAAAACA+TGG | - | chr8_4:1420935-1420954 | Msa1306470:CDS | 45.0% | |
| GAGTTGTGGGAAAAACATGG+AGG | - | chr8_4:1420938-1420957 | Msa1306470:CDS | 45.0% | |
| !!! | GGAGAACTCTGGCTTTTGTA+TGG | - | chr8_4:1420959-1420978 | Msa1306470:CDS | 45.0% |
| !!! | GAACTCTGGCTTTTGTATGG+AGG | - | chr8_4:1420962-1420981 | Msa1306470:CDS | 45.0% |
| TTTGTATGGAGGGTTGAAGC+AGG | - | chr8_4:1420973-1420992 | Msa1306470:CDS | 45.0% | |
| AGAATGGAAGTTGGAAGCTC+AGG | - | chr8_4:1421033-1421052 | Msa1306470:CDS | 45.0% | |
| TCGCCGAGCATTTGAGAAAA+TGG | - | chr8_4:1421125-1421144 | Msa1306470:CDS | 45.0% | |
| !! | GAAGGCATTTGACCATTGGT+AGG | - | chr8_4:1421302-1421321 | Msa1306470:CDS | 45.0% |
| AGGCATTTGACCATTGGTAG+GGG | - | chr8_4:1421304-1421323 | Msa1306470:CDS | 45.0% | |
| TCTGACTCCTTCCACAAAAC+TGG | + | chr8_4:1421382-1421401 | None:intergenic | 45.0% | |
| GCATGTGTATCAGGAGATTC+AGG | - | chr8_4:1421523-1421542 | Msa1306470:CDS | 45.0% | |
| !! | AAGATGGTGCTATGGATAGG+AGG | - | chr8_4:1421601-1421620 | Msa1306470:CDS | 45.0% |
| !! | AGATGGTGCTATGGATAGGA+GGG | - | chr8_4:1421602-1421621 | Msa1306470:CDS | 45.0% |
| TGGAAAGCGAAACTGATTGG+TGG | - | chr8_4:1421809-1421828 | Msa1306470:CDS | 45.0% | |
| GGAAAGCGAAACTGATTGGT+GGG | - | chr8_4:1421810-1421829 | Msa1306470:CDS | 45.0% | |
| GTGGGATCACAAACTTGTGA+TGG | - | chr8_4:1421828-1421847 | Msa1306470:CDS | 45.0% | |
| ATGGATCTTCTCCCTCGTTT+CGG | - | chr8_4:1421847-1421866 | Msa1306470:CDS | 45.0% | |
| ACTGTGTAGTCCTTTCCACT+TGG | + | chr8_4:1421979-1421998 | None:intergenic | 45.0% | |
| CAATTGAGGAGAAGCTTGGA+AGG | - | chr8_4:1422022-1422041 | Msa1306470:CDS | 45.0% | |
| ! | AAATTCCACCAATGATGGCG+AGG | + | chr8_4:1422059-1422078 | None:intergenic | 45.0% |
| !! | CTTCAAGGGCATCCTGTTTA+TGG | + | chr8_4:1422121-1422140 | None:intergenic | 45.0% |
| CATAAACAGGATGCCCTTGA+AGG | - | chr8_4:1422119-1422138 | Msa1306470:CDS | 45.0% | |
| CCATGAAGACATCTCCTTCA+AGG | + | chr8_4:1422136-1422155 | None:intergenic | 45.0% | |
| CCTTGAAGGAGATGTCTTCA+TGG | - | chr8_4:1422133-1422152 | Msa1306470:CDS | 45.0% | |
| TCGGTATTTGATCACGCAGA+CGG | - | chr8_4:1422222-1422241 | Msa1306470:CDS | 45.0% | |
| CAATGAAACTGGAATGGGAC+TGG | + | chr8_4:1422298-1422317 | None:intergenic | 45.0% | |
| GGAAGTGAAACCACAGGTTA+AGG | + | chr8_4:1422391-1422410 | None:intergenic | 45.0% | |
| GCAAGGAGTAGTGCTAAGAA+AGG | - | chr8_4:1422468-1422487 | Msa1306470:CDS | 45.0% | |
| GTTCAAGCTGTGATCAGTCA+AGG | - | chr8_4:1422564-1422583 | Msa1306470:CDS | 45.0% | |
| CGACCGGTGTAACTAATGTT+TGG | + | chr8_4:1422809-1422828 | None:intergenic | 45.0% | |
| TAGTTACACCGGTCGATAAG+TGG | - | chr8_4:1422814-1422833 | Msa1306470:CDS | 45.0% | |
| TTGTCGAACCACTTATCGAC+CGG | + | chr8_4:1422825-1422844 | None:intergenic | 45.0% | |
| GGTTCGACAAATCACTCTGT+TGG | - | chr8_4:1422835-1422854 | Msa1306470:CDS | 45.0% | |
| ! | AGCTCTAGTCTCAAGTACTG+TGG | + | chr8_4:1422925-1422944 | None:intergenic | 45.0% |
| TTCCTCCACCTTTGGACCTT+TGG | - | chr8_4:1420154-1420173 | Msa1306470:CDS | 50.0% | |
| CATTGCTGCCAAAGGTCCAA+AGG | + | chr8_4:1420165-1420184 | None:intergenic | 50.0% | |
| GACCGTATATCTTCCTCGGT+AGG | - | chr8_4:1420440-1420459 | Msa1306470:CDS | 50.0% | |
| GCTACTAGAGATACCTACCG+AGG | + | chr8_4:1420456-1420475 | None:intergenic | 50.0% | |
| GGGATGGCAGTAACCAGATA+TGG | + | chr8_4:1420480-1420499 | None:intergenic | 50.0% | |
| CGGGACCAAATTCTTCTTGC+TGG | + | chr8_4:1420858-1420877 | None:intergenic | 50.0% | |
| TCGGGTCGAAGAATGGAAGT+TGG | - | chr8_4:1421024-1421043 | Msa1306470:CDS | 50.0% | |
| TGGAAGTTGGAAGCTCAGGA+TGG | - | chr8_4:1421037-1421056 | Msa1306470:CDS | 50.0% | |
| TGGAAGCTCAGGATGGAAAC+TGG | - | chr8_4:1421044-1421063 | Msa1306470:CDS | 50.0% | |
| AATGCTCGGCGACACTTCTT+CGG | + | chr8_4:1421117-1421136 | None:intergenic | 50.0% | |
| ACTACTCTTGCCCCTACCAA+TGG | + | chr8_4:1421317-1421336 | None:intergenic | 50.0% | |
| !! | GATGGTGCTATGGATAGGAG+GGG | - | chr8_4:1421603-1421622 | Msa1306470:CDS | 50.0% |
| TATGGATAGGAGGGGAGAGT+AGG | - | chr8_4:1421611-1421630 | Msa1306470:CDS | 50.0% | |
| TGGATCTTCTCCCTCGTTTC+GGG | - | chr8_4:1421848-1421867 | Msa1306470:CDS | 50.0% | |
| ACTTTAGGCCTCGCCATCAT+TGG | - | chr8_4:1422048-1422067 | Msa1306470:CDS | 50.0% | |
| GTAAAGAAGCTCACGCCTTC+CGG | - | chr8_4:1422160-1422179 | Msa1306470:CDS | 50.0% | |
| ! | GCTAGCTCTTGCCAAAGACA+AGG | + | chr8_4:1422891-1422910 | None:intergenic | 50.0% |
| TGCCAAAGGTCCAAAGGTGG+AGG | + | chr8_4:1420159-1420178 | None:intergenic | 55.0% | |
| TGCTGCCAAAGGTCCAAAGG+TGG | + | chr8_4:1420162-1420181 | None:intergenic | 55.0% | |
| TCTCCAGCTGCCTGTACTTC+AGG | - | chr8_4:1420401-1420420 | Msa1306470:CDS | 55.0% | |
| TCACCTGAAGTACAGGCAGC+TGG | + | chr8_4:1420407-1420426 | None:intergenic | 55.0% | |
| ATGGAGGGTTGAAGCAGGAG+TGG | - | chr8_4:1420978-1420997 | Msa1306470:CDS | 55.0% | |
| ATGCTGTCCATGCCCTCTCT+CGG | - | chr8_4:1421005-1421024 | Msa1306470:CDS | 55.0% | |
| CCATTCTTCGACCCGAGAGA+GGG | + | chr8_4:1421020-1421039 | None:intergenic | 55.0% | |
| TCCATTCTTCGACCCGAGAG+AGG | + | chr8_4:1421021-1421040 | None:intergenic | 55.0% | |
| CACTGCGTTTGAGCCTCGAA+CGG | + | chr8_4:1421450-1421469 | None:intergenic | 55.0% | |
| GGATCTTCTCCCTCGTTTCG+GGG | - | chr8_4:1421849-1421868 | Msa1306470:CDS | 55.0% | |
| GATCTTCTCCCTCGTTTCGG+GGG | - | chr8_4:1421850-1421869 | Msa1306470:CDS | 55.0% | |
| CCAAGTTCATGACGCGAGGA+AGG | + | chr8_4:1421903-1421922 | None:intergenic | 55.0% | |
| CCTTCCTCGCGTCATGAACT+TGG | - | chr8_4:1421900-1421919 | Msa1306470:CDS | 55.0% | |
| GGTTCCAAGTTCATGACGCG+AGG | + | chr8_4:1421907-1421926 | None:intergenic | 55.0% | |
| TTAGGCCTCGCCATCATTGG+TGG | - | chr8_4:1422051-1422070 | Msa1306470:CDS | 55.0% | |
| GTGTGGGGAAGTGAAACCAC+AGG | + | chr8_4:1422397-1422416 | None:intergenic | 55.0% | |
| GCGACTGTGCACGAATGCAT+TGG | - | chr8_4:1422773-1422792 | Msa1306470:CDS | 55.0% | |
| TGCTGTCCATGCCCTCTCTC+GGG | - | chr8_4:1421006-1421025 | Msa1306470:CDS | 60.0% | |
| CCCTCTCTCGGGTCGAAGAA+TGG | - | chr8_4:1421017-1421036 | Msa1306470:CDS | 60.0% | |
| CGTTCGAGGCTCAAACGCAG+TGG | - | chr8_4:1421448-1421467 | Msa1306470:CDS | 60.0% | |
| GAGTCTCTCCCCCGAAACGA+GGG | + | chr8_4:1421861-1421880 | None:intergenic | 60.0% | |
| TGAGTCTCTCCCCCGAAACG+AGG | + | chr8_4:1421862-1421881 | None:intergenic | 60.0% | |
| CCTCGAGCTCGACAACCGTT+GGG | + | chr8_4:1422656-1422675 | None:intergenic | 60.0% | |
| ACCTCGAGCTCGACAACCGT+TGG | + | chr8_4:1422657-1422676 | None:intergenic | 60.0% | |
| CAGTCGCAAGAGCTCGAGAG+CGG | + | chr8_4:1422760-1422779 | None:intergenic | 60.0% | |
| CTTCGACCCGAGAGAGGGCA+TGG | + | chr8_4:1421015-1421034 | None:intergenic | 65.0% | |
| CTCAGCGGCACTACCGTTCG+AGG | - | chr8_4:1421434-1421453 | Msa1306470:CDS | 65.0% | |
| CCCAACGGTTGTCGAGCTCG+AGG | - | chr8_4:1422653-1422672 | Msa1306470:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1420134 | 1423112 | 1420134 | ID=Msa1306470;Name=Msa1306470 |
| chr8_4 | mRNA | 1420134 | 1423112 | 1420134 | ID=Msa1306470-mRNA-1;Parent=Msa1306470;Name=Msa1306470-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|992 |
| chr8_4 | exon | 1420134 | 1423112 | 1420134 | ID=Msa1306470-mRNA-1:exon:388;Parent=Msa1306470-mRNA-1 |
| chr8_4 | CDS | 1420134 | 1423112 | 1420134 | ID=Msa1306470-mRNA-1:cds;Parent=Msa1306470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
