AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1313610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313610 MtrunA17_Chr8g0339861 73.457 162 43 0 1 162 326 487 4.50e-86 260
Msa1313610 MtrunA17_Chr8g0381541 68.098 163 51 1 1 162 328 490 1.55e-80 246
Msa1313610 MtrunA17_Chr5g0400421 62.577 163 60 1 1 162 329 491 4.11e-75 232
Msa1313610 MtrunA17_Chr5g0400411 61.350 163 62 1 1 162 328 490 3.92e-74 230
Msa1313610 MtrunA17_Chr4g0000151 71.970 132 37 0 31 162 12 143 2.19e-73 216
Msa1313610 MtrunA17_Chr2g0293411 58.282 163 67 1 1 162 326 488 2.15e-68 215
Msa1313610 MtrunA17_Chr2g0293421 58.282 163 66 2 1 162 328 489 3.44e-66 209
Msa1313610 MtrunA17_Chr8g0381571 66.917 133 43 1 1 132 328 460 4.73e-63 201
Msa1313610 MtrunA17_Chr8g0381561 63.636 110 39 1 24 132 2 111 4.79e-52 162
Msa1313610 MtrunA17_Chr1g0161661 65.169 89 31 0 73 161 12 100 4.13e-43 138
Msa1313610 MtrunA17_Chr5g0400391 63.218 87 32 0 74 160 1 87 4.95e-40 131
Msa1313610 MtrunA17_Chr3g0089361 40.373 161 92 3 3 161 319 477 2.43e-36 130
Msa1313610 MtrunA17_Chr3g0089351 40.123 162 92 4 3 161 236 395 2.82e-35 126
Msa1313610 MtrunA17_Chr5g0408181 42.308 156 86 3 1 153 301 455 1.24e-32 120
Msa1313610 MtrunA17_Chr1g0161641 58.228 79 33 0 54 132 10 88 2.64e-32 110
Msa1313610 MtrunA17_Chr8g0369791 40.385 156 89 3 1 153 303 457 9.85e-32 118
Msa1313610 MtrunA17_Chr1g0153371 39.130 138 82 2 21 157 329 465 3.49e-30 114
Msa1313610 MtrunA17_Chr5g0403931 45.000 140 70 4 1 134 315 453 8.38e-30 113
Msa1313610 MtrunA17_Chr5g0404861 45.946 111 57 2 27 134 24 134 2.95e-29 105
Msa1313610 MtrunA17_Chr7g0226771 37.671 146 88 2 1 144 310 454 5.54e-29 110
Msa1313610 MtrunA17_Chr4g0044851 40.299 134 78 2 21 153 330 462 9.73e-29 110
Msa1313610 MtrunA17_Chr8g0341951 42.969 128 70 2 8 133 320 446 2.23e-28 109
Msa1313610 MtrunA17_Chr4g0044841 38.411 151 90 3 2 150 312 461 4.17e-28 108
Msa1313610 MtrunA17_Chr5g0437001 40.152 132 75 2 25 152 1 132 1.14e-27 101
Msa1313610 MtrunA17_Chr8g0388921 36.364 154 96 2 1 153 317 469 5.67e-27 105
Msa1313610 MtrunA17_Chr3g0107501 35.065 154 97 2 1 151 314 467 1.90e-26 103
Msa1313610 MtrunA17_Chr1g0164371 39.623 159 94 2 1 158 316 473 2.03e-26 103
Msa1313610 MtrunA17_Chr3g0113321 41.045 134 72 3 1 128 304 436 2.57e-26 103
Msa1313610 MtrunA17_Chr8g0372411 38.411 151 87 4 3 149 318 466 3.48e-26 103
Msa1313610 MtrunA17_Chr5g0397971 37.143 140 83 3 1 136 308 446 1.27e-25 101
Msa1313610 MtrunA17_Chr5g0443731 33.750 160 102 4 1 158 311 468 4.03e-25 100
Msa1313610 MtrunA17_Chr3g0107511 37.662 154 93 3 1 151 314 467 7.31e-25 99.4
Msa1313610 MtrunA17_Chr6g0455461 36.364 132 82 2 21 150 323 454 2.19e-23 95.5
Msa1313610 MtrunA17_Chr3g0078411 35.606 132 83 2 21 150 323 454 2.39e-23 95.1
Msa1313610 MtrunA17_Chr5g0443401 33.553 152 98 3 1 151 318 467 7.46e-23 94.0
Msa1313610 MtrunA17_Chr8g0380471 32.903 155 102 2 1 154 316 469 3.76e-22 92.0
Msa1313610 MtrunA17_Chr7g0219961 34.848 132 84 2 21 150 322 453 1.17e-21 90.5
Msa1313610 MtrunA17_Chr3g0141801 36.719 128 77 3 17 142 339 464 2.99e-21 89.4
Msa1313610 MtrunA17_Chr6g0478161 30.952 168 101 6 2 157 325 489 3.26e-21 89.4
Msa1313610 MtrunA17_Chr8g0380931 32.051 156 103 3 2 154 343 498 5.52e-21 88.6
Msa1313610 MtrunA17_Chr6g0463541 42.353 85 48 1 52 136 2 85 4.78e-19 77.8
Msa1313610 MtrunA17_Chr6g0451811 35.152 165 82 6 15 154 44 208 5.54e-18 77.4
Msa1313610 MtrunA17_Chr8g0372711 30.909 165 96 4 1 149 325 487 2.21e-17 78.6
Msa1313610 MtrunA17_Chr6g0458561 32.886 149 88 3 15 151 369 517 2.13e-15 72.8
Msa1313610 MtrunA17_Chr6g0466941 37.879 132 68 4 10 127 352 483 2.70e-15 72.4
Msa1313610 MtrunA17_Chr6g0466901 37.209 129 67 4 13 127 354 482 1.57e-14 70.1
Msa1313610 MtrunA17_Chr5g0395321 33.858 127 78 2 21 141 345 471 2.53e-14 69.7
Msa1313610 MtrunA17_Chr6g0451691 29.452 146 93 3 1 138 355 498 5.88e-14 68.6
Msa1313610 MtrunA17_Chr5g0395381 33.071 127 79 2 21 141 320 446 7.30e-14 68.2
Msa1313610 MtrunA17_Chr4g0035921 35.772 123 69 4 15 127 355 477 8.82e-14 68.2
Msa1313610 MtrunA17_Chr5g0401691 33.594 128 66 4 21 137 361 480 1.88e-13 67.0
Msa1313610 MtrunA17_Chr8g0346261 32.258 155 85 6 20 165 391 534 2.10e-13 67.0
Msa1313610 MtrunA17_Chr3g0101721 32.847 137 78 5 1 127 335 467 2.50e-13 66.6
Msa1313610 MtrunA17_Chr4g0053621 31.092 119 79 2 21 137 350 467 2.52e-13 66.6
Msa1313610 MtrunA17_Chr5g0395331 34.646 127 77 2 21 141 352 478 2.83e-13 66.6
Msa1313610 MtrunA17_Chr3g0101631 35.043 117 66 3 21 127 344 460 3.01e-13 66.6
Msa1313610 MtrunA17_Chr3g0116741 40.816 98 52 2 21 112 363 460 3.11e-13 66.6
Msa1313610 MtrunA17_Chr3g0135841 35.593 118 66 3 24 133 390 505 3.55e-13 66.2
Msa1313610 MtrunA17_Chr1g0151221 35.897 117 61 4 27 133 385 497 3.64e-13 66.2
Msa1313610 MtrunA17_Chr3g0082701 34.646 127 69 4 15 127 364 490 3.75e-13 66.2
Msa1313610 MtrunA17_Chr6g0451681 32.353 136 82 3 15 140 316 451 4.43e-13 65.9
Msa1313610 MtrunA17_Chr5g0403321 35.897 117 65 3 21 127 354 470 7.18e-13 65.5
Msa1313610 MtrunA17_Chr8g0364081 29.457 129 81 5 23 142 396 523 7.67e-13 65.5
Msa1313610 MtrunA17_Chr1g0164211 35.433 127 76 2 21 141 342 468 1.05e-12 65.1
Msa1313610 MtrunA17_Chr8g0373441 39.362 94 53 3 1 91 312 404 1.14e-12 64.7
Msa1313610 MtrunA17_Chr3g0101611 32.479 117 73 2 27 137 357 473 1.19e-12 64.7
Msa1313610 MtrunA17_Chr8g0372251 34.615 104 62 2 15 112 347 450 1.39e-12 64.7
Msa1313610 MtrunA17_Chr2g0314781 33.577 137 81 4 21 147 32 168 1.69e-12 62.0
Msa1313610 MtrunA17_Chr5g0431501 33.813 139 83 5 3 134 333 469 2.06e-12 63.9
Msa1313610 MtrunA17_Chr5g0431461 33.813 139 83 5 3 134 333 469 2.06e-12 63.9
Msa1313610 MtrunA17_Chr6g0463791 35.938 128 69 4 13 127 336 463 2.09e-12 63.9
Msa1313610 MtrunA17_Chr7g0258211 35.965 114 57 3 19 116 348 461 2.23e-12 63.9
Msa1313610 MtrunA17_Chr4g0039391 33.607 122 76 2 21 137 351 472 2.65e-12 63.9
Msa1313610 MtrunA17_Chr4g0058211 29.710 138 90 3 3 134 49 185 2.83e-12 62.4
Msa1313610 MtrunA17_Chr4g0058261 36.275 102 59 2 21 116 379 480 3.16e-12 63.5
Msa1313610 MtrunA17_Chr4g0047641 37.168 113 61 3 25 127 368 480 4.22e-12 63.2
Msa1313610 MtrunA17_Chr7g0235261 31.746 126 76 4 23 140 365 488 4.94e-12 63.2
Msa1313610 MtrunA17_Chr6g0463801 37.500 104 59 2 23 120 347 450 6.02e-12 62.8
Msa1313610 MtrunA17_Chr3g0101621 33.898 118 67 3 21 127 338 455 7.47e-12 62.4
Msa1313610 MtrunA17_Chr7g0215181 31.469 143 83 4 6 133 338 480 7.68e-12 62.4
Msa1313610 MtrunA17_Chr3g0101821 36.667 120 63 4 18 127 349 465 7.89e-12 62.4
Msa1313610 MtrunA17_Chr7g0218601 38.318 107 59 3 21 120 348 454 8.90e-12 62.4
Msa1313610 MtrunA17_Chr4g0058191 29.710 138 90 3 3 134 321 457 9.65e-12 62.0
Msa1313610 MtrunA17_Chr8g0339331 31.250 128 80 2 15 134 356 483 1.03e-11 62.0
Msa1313610 MtrunA17_Chr3g0101671 35.135 111 62 4 27 127 359 469 1.06e-11 62.0
Msa1313610 MtrunA17_Chr4g0047661 34.783 115 69 2 4 112 348 462 1.08e-11 62.0
Msa1313610 MtrunA17_Chr1g0160851 37.719 114 65 2 27 134 351 464 1.11e-11 62.0
Msa1313610 MtrunA17_Chr8g0351801 37.383 107 52 2 25 116 361 467 1.18e-11 62.0
Msa1313610 MtrunA17_Chr2g0314731 33.577 137 81 4 21 147 345 481 1.20e-11 62.0
Msa1313610 MtrunA17_Chr8g0362731 32.540 126 75 4 23 140 263 386 1.21e-11 61.6
Msa1313610 MtrunA17_Chr8g0361471 36.036 111 61 4 27 127 355 465 1.24e-11 62.0
Msa1313610 MtrunA17_Chr6g0451641 34.615 130 72 4 21 137 364 493 1.28e-11 61.6
Msa1313610 MtrunA17_Chr4g0047631 36.441 118 65 4 20 127 359 476 1.61e-11 61.6
Msa1313610 MtrunA17_Chr2g0280061 29.371 143 92 4 1 134 39 181 1.71e-11 60.1
Msa1313610 MtrunA17_Chr1g0160861 37.719 114 65 2 27 134 192 305 1.74e-11 61.2
Msa1313610 MtrunA17_Chr5g0446151 33.333 120 75 2 20 134 349 468 1.74e-11 61.2
Msa1313610 MtrunA17_Chr5g0431511 32.374 139 85 4 3 134 333 469 1.92e-11 61.2
Msa1313610 MtrunA17_Chr3g0101541 34.783 115 65 3 23 127 2 116 2.16e-11 58.5
Msa1313610 MtrunA17_Chr3g0101731 35.000 120 65 4 18 127 349 465 2.22e-11 61.2
Msa1313610 MtrunA17_Chr1g0162811 33.628 113 66 3 24 127 352 464 2.42e-11 60.8
Msa1313610 MtrunA17_Chr6g0466331 36.036 111 61 4 27 127 355 465 2.59e-11 60.8
Msa1313610 MtrunA17_Chr6g0465511 36.036 111 61 4 27 127 355 465 2.61e-11 60.8
Msa1313610 MtrunA17_Chr4g0046701 31.034 116 68 3 24 127 9 124 3.16e-11 58.5
Msa1313610 MtrunA17_Chr1g0176831 33.577 137 81 4 21 147 375 511 3.63e-11 60.5
Msa1313610 MtrunA17_Chr6g0451751 31.847 157 84 6 21 154 371 527 3.84e-11 60.5
Msa1313610 MtrunA17_Chr3g0101811 33.871 124 71 4 18 133 364 484 3.86e-11 60.5
Msa1313610 MtrunA17_Chr3g0101651 33.333 132 76 6 8 127 338 469 4.22e-11 60.5
Msa1313610 MtrunA17_Chr7g0265611 32.824 131 80 2 21 143 363 493 4.32e-11 60.5
Msa1313610 MtrunA17_Chr3g0101711 31.618 136 79 5 2 127 337 468 4.47e-11 60.1
Msa1313610 MtrunA17_Chr4g0046331 34.579 107 55 2 46 138 374 479 4.77e-11 60.1
Msa1313610 MtrunA17_Chr5g0446161 32.500 120 76 2 20 134 348 467 4.95e-11 60.1
Msa1313610 MtrunA17_Chr5g0413911 31.746 126 78 3 20 137 376 501 5.11e-11 60.1
Msa1313610 MtrunA17_Chr5g0430131 31.967 122 76 3 20 134 349 470 5.11e-11 60.1
Msa1313610 MtrunA17_Chr3g0094171 31.333 150 85 6 1 141 338 478 5.48e-11 60.1
Msa1313610 MtrunA17_Chr1g0174431 35.043 117 63 4 13 116 39 155 5.75e-11 58.5
Msa1313610 MtrunA17_Chr4g0058281 34.314 102 61 2 21 116 361 462 6.33e-11 59.7
Msa1313610 MtrunA17_Chr4g0004601 31.452 124 79 3 23 140 386 509 6.56e-11 59.7
Msa1313610 MtrunA17_Chr8g0364631 29.457 129 76 4 21 134 347 475 7.34e-11 59.7
Msa1313610 MtrunA17_Chr2g0314721 36.567 134 75 5 24 147 359 492 7.60e-11 59.7
Msa1313610 MtrunA17_Chr1g0205361 35.965 114 67 3 27 134 351 464 8.28e-11 59.3
Msa1313610 MtrunA17_Chr4g0028321 32.292 96 60 1 47 137 32 127 8.49e-11 57.4
Msa1313610 MtrunA17_Chr3g0117301 34.188 117 69 3 25 133 1 117 9.01e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313610 AT2G32440.2 58.385 161 65 2 1 160 327 486 2.41e-66 210
Msa1313610 AT2G32440.1 58.385 161 65 2 1 160 327 486 2.41e-66 210
Msa1313610 AT1G05160.2 59.748 159 62 2 2 158 329 487 4.08e-66 209
Msa1313610 AT1G05160.1 59.748 159 62 2 2 158 329 487 4.08e-66 209
Msa1313610 AT2G29090.3 41.772 158 90 2 2 158 228 384 3.76e-34 124
Msa1313610 AT2G29090.2 41.772 158 90 2 2 158 323 479 2.08e-33 123
Msa1313610 AT2G29090.1 41.772 158 90 2 2 158 323 479 2.08e-33 123
Msa1313610 AT3G19270.2 39.744 156 92 2 2 156 307 461 2.28e-32 120
Msa1313610 AT3G44970.1 40.789 152 83 5 1 147 313 462 2.36e-30 115
Msa1313610 AT3G19270.1 42.105 133 75 2 2 133 307 438 3.34e-30 114
Msa1313610 AT4G19230.1 40.909 154 88 3 1 153 303 454 9.36e-30 113
Msa1313610 AT5G05690.3 41.304 138 75 3 1 133 186 322 1.50e-29 111
Msa1313610 AT4G19230.2 44.526 137 73 3 1 136 303 437 3.16e-29 112
Msa1313610 AT3G13730.2 48.148 108 53 2 27 132 358 464 7.21e-29 110
Msa1313610 AT3G13730.1 47.706 109 54 2 27 133 358 465 7.59e-29 110
Msa1313610 AT5G05690.1 41.304 138 75 3 1 133 305 441 7.92e-29 110
Msa1313610 AT5G45340.1 38.312 154 92 3 1 153 303 454 1.16e-28 110
Msa1313610 AT1G55940.2 43.571 140 75 3 2 137 330 469 2.77e-28 109
Msa1313610 AT5G36130.1 37.143 140 86 2 25 162 1 140 4.32e-27 99.8
Msa1313610 AT1G55940.1 43.284 134 72 3 2 131 330 463 9.99e-27 105
Msa1313610 AT5G45340.2 41.045 134 76 3 1 133 303 434 3.52e-26 103
Msa1313610 AT1G12740.1 38.571 140 81 3 1 136 308 446 4.92e-26 103
Msa1313610 AT1G12740.2 38.571 140 81 3 1 136 314 452 5.10e-26 103
Msa1313610 AT4G36380.1 44.248 113 59 2 25 133 374 486 1.13e-25 102
Msa1313610 AT5G48000.2 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.4 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.7 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.6 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.5 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.3 37.975 158 88 5 2 150 314 470 3.37e-25 100
Msa1313610 AT5G48000.1 37.975 158 88 5 2 150 355 511 3.93e-25 100
Msa1313610 AT5G36110.1 37.594 133 79 2 20 148 333 465 5.22e-25 100
Msa1313610 AT3G50660.1 38.365 159 82 5 1 144 339 496 6.85e-25 100
Msa1313610 AT1G78490.1 44.444 117 60 3 25 137 338 453 1.39e-24 99.0
Msa1313610 AT1G12740.4 38.356 146 79 4 1 136 308 452 2.81e-24 98.2
Msa1313610 AT2G42850.1 34.395 157 98 3 7 162 329 481 5.19e-24 97.4
Msa1313610 AT5G14400.3 36.090 133 68 1 1 133 274 389 3.05e-22 92.0
Msa1313610 AT1G19630.3 36.496 137 84 3 1 136 315 449 4.89e-22 92.0
Msa1313610 AT5G14400.1 33.333 144 79 1 1 144 220 346 5.03e-22 91.3
Msa1313610 AT5G14400.2 33.333 144 79 1 1 144 274 400 6.23e-22 91.3
Msa1313610 AT1G19630.1 35.507 138 86 3 1 137 315 450 1.73e-21 90.5
Msa1313610 AT1G73340.1 39.683 126 66 3 20 136 332 456 2.45e-21 90.1
Msa1313610 AT5G38970.2 33.083 133 87 2 7 137 229 361 8.48e-21 87.8
Msa1313610 AT5G38970.4 33.083 133 87 2 7 137 229 361 8.48e-21 87.8
Msa1313610 AT5G38970.1 33.083 133 87 2 7 137 310 442 1.28e-20 87.8
Msa1313610 AT3G30180.1 33.846 130 84 2 7 134 310 439 4.23e-20 86.7
Msa1313610 AT1G65670.1 33.077 130 82 3 2 127 306 434 6.94e-19 83.2
Msa1313610 AT4G15310.1 36.923 130 77 4 2 127 313 441 1.38e-18 82.0
Msa1313610 AT4G15300.1 31.783 129 83 3 2 126 322 449 1.41e-18 82.0
Msa1313610 AT4G15300.2 31.783 129 83 3 2 126 310 437 1.58e-18 82.0
Msa1313610 AT4G15300.3 31.538 130 84 3 2 127 300 428 1.61e-18 82.0
Msa1313610 AT4G15393.2 33.333 132 81 4 2 127 307 437 1.56e-17 79.3
Msa1313610 AT3G30290.1 36.667 120 71 4 12 127 250 368 6.27e-17 77.4
Msa1313610 AT3G28740.1 33.607 122 78 2 20 139 351 471 4.80e-16 75.1
Msa1313610 AT5G05690.2 44.681 94 48 3 1 92 306 397 5.54e-16 74.7
Msa1313610 AT2G26170.2 39.316 117 63 3 24 133 292 407 8.33e-16 74.3
Msa1313610 AT3G26270.1 34.532 139 83 3 3 133 332 470 1.17e-15 73.9
Msa1313610 AT2G26170.1 39.316 117 63 3 24 133 375 490 1.18e-15 73.9
Msa1313610 AT4G15396.3 31.159 138 87 5 2 133 309 444 1.77e-15 73.2
Msa1313610 AT4G15396.1 31.061 132 84 4 2 127 309 439 2.70e-15 72.8
Msa1313610 AT5G67310.1 36.975 119 72 2 21 137 355 472 5.75e-15 72.0
Msa1313610 AT3G53300.1 35.833 120 71 2 3 116 328 447 5.82e-15 72.0
Msa1313610 AT4G37430.1 34.783 115 70 2 27 136 350 464 1.94e-14 70.5
Msa1313610 AT5G35715.1 35.833 120 71 2 3 116 266 385 7.92e-14 68.6
Msa1313610 AT1G66540.2 34.711 121 60 3 27 137 178 289 8.80e-14 68.2
Msa1313610 AT4G37410.1 34.746 118 72 2 27 139 347 464 1.21e-13 68.2
Msa1313610 AT4G37360.1 34.513 113 71 2 27 137 350 461 1.39e-13 67.8
Msa1313610 AT1G66540.1 34.711 121 60 3 27 137 237 348 1.59e-13 67.4
Msa1313610 AT3G26280.1 37.273 110 63 2 13 116 343 452 1.76e-13 67.4
Msa1313610 AT3G26280.2 37.273 110 63 2 13 116 360 469 1.97e-13 67.4
Msa1313610 AT3G26230.1 36.752 117 64 3 21 127 347 463 2.06e-13 67.4
Msa1313610 AT4G37400.1 31.356 118 74 2 27 137 345 462 2.13e-13 67.4
Msa1313610 AT4G37310.1 30.935 139 89 3 3 134 332 470 2.78e-13 67.0
Msa1313610 AT5G57220.1 33.628 113 72 2 27 137 345 456 5.26e-13 66.2
Msa1313610 AT4G31940.1 33.333 120 67 3 21 127 365 484 6.55e-13 65.9
Msa1313610 AT4G31950.1 32.812 128 73 4 21 135 353 480 7.17e-13 65.9
Msa1313610 AT5G04330.1 33.058 121 73 3 16 128 345 465 1.16e-12 65.1
Msa1313610 AT3G26170.1 30.935 139 88 3 3 133 331 469 1.61e-12 64.7
Msa1313610 AT3G26180.2 30.935 139 88 3 3 133 197 335 1.67e-12 64.7
Msa1313610 AT4G22710.1 33.113 151 78 6 24 152 371 520 1.81e-12 64.7
Msa1313610 AT1G74550.1 29.655 145 96 2 1 139 310 454 1.94e-12 64.7
Msa1313610 AT4G37370.1 31.092 119 79 2 27 143 349 466 1.99e-12 64.7
Msa1313610 AT4G37340.1 32.743 113 73 2 27 137 350 461 2.15e-12 64.3
Msa1313610 AT5G25120.1 34.375 128 73 3 20 141 340 462 2.43e-12 64.3
Msa1313610 AT4G22690.1 33.113 151 78 6 24 152 402 551 2.45e-12 64.3
Msa1313610 AT3G50660.2 41.237 97 53 3 1 94 339 434 2.71e-12 63.9
Msa1313610 AT3G26180.1 30.935 139 88 3 3 133 331 469 3.44e-12 63.9
Msa1313610 AT2G45580.2 29.730 148 81 3 27 151 209 356 4.13e-12 63.5
Msa1313610 AT4G36220.1 31.579 114 72 2 21 128 363 476 4.45e-12 63.5
Msa1313610 AT5G36220.2 32.743 113 73 2 27 137 210 321 4.49e-12 63.2
Msa1313610 AT3G26150.1 34.167 120 73 2 3 116 331 450 4.76e-12 63.5
Msa1313610 AT2G45580.1 29.730 148 81 3 27 151 363 510 6.33e-12 63.2
Msa1313610 AT3G26300.1 31.298 131 80 3 7 127 331 461 7.12e-12 62.8
Msa1313610 AT1G11600.1 32.374 139 72 4 21 148 355 482 7.29e-12 62.8
Msa1313610 AT5G36220.1 32.743 113 73 2 27 137 356 467 7.77e-12 62.8
Msa1313610 AT3G26200.1 32.759 116 72 2 3 112 328 443 8.22e-12 62.8
Msa1313610 AT1G33730.1 38.462 117 64 3 24 134 222 336 9.00e-12 62.4
Msa1313610 AT1G33730.2 38.462 117 64 3 24 134 222 336 9.00e-12 62.4
Msa1313610 AT3G26290.1 31.298 131 80 3 7 127 331 461 1.09e-11 62.4
Msa1313610 AT3G26290.2 31.298 131 80 3 7 127 344 474 1.09e-11 62.4
Msa1313610 AT3G53290.1 36.036 111 65 2 12 116 244 354 1.32e-11 62.0
Msa1313610 AT3G26210.1 30.833 120 77 2 3 116 330 449 1.33e-11 62.0
Msa1313610 AT3G26190.1 34.483 116 70 2 3 112 328 443 1.62e-11 62.0
Msa1313610 AT4G15330.2 30.065 153 83 4 27 155 329 481 2.86e-11 61.2
Msa1313610 AT3G53280.1 33.621 116 71 2 3 112 326 441 3.42e-11 60.8
Msa1313610 AT5G25130.1 34.375 128 73 3 20 141 340 462 4.02e-11 60.8
Msa1313610 AT4G15330.1 30.065 153 83 4 27 155 357 509 4.10e-11 60.8
Msa1313610 AT1G13080.1 30.303 132 86 2 3 128 331 462 4.15e-11 60.8
Msa1313610 AT1G78490.2 48.529 68 32 2 25 90 338 404 4.46e-11 60.5
Msa1313610 AT4G37330.1 32.174 115 75 2 25 137 345 458 4.91e-11 60.5
Msa1313610 AT2G45550.1 32.456 114 71 2 27 134 361 474 5.20e-11 60.5
Msa1313610 AT2G23220.1 30.252 119 80 2 21 137 359 476 5.21e-11 60.5
Msa1313610 AT1G13080.2 30.303 132 86 2 3 128 213 344 5.55e-11 60.1
Msa1313610 AT1G13100.1 31.579 133 80 3 3 129 327 454 6.17e-11 60.1
Msa1313610 AT5G25140.1 34.375 128 73 3 20 141 340 462 6.43e-11 60.1
Msa1313610 AT2G45560.1 32.308 130 80 3 20 143 354 481 6.48e-11 60.1
Msa1313610 AT3G25180.1 26.016 123 85 2 21 137 357 479 6.49e-11 60.1
Msa1313610 AT3G26220.1 37.607 117 66 3 3 112 331 447 6.89e-11 60.1
Msa1313610 AT1G28430.1 37.374 99 52 2 24 112 356 454 7.81e-11 60.1
Msa1313610 AT2G23190.1 31.092 119 79 2 21 137 388 505 7.96e-11 60.1

Find 39 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTACATTCCATCTTTC+TGG 0.078540 8_4:-11689380 None:intergenic
GGATTAAATTCTTCCGGATT+TGG 0.214998 8_4:-11689359 None:intergenic
TCTAACATGCATAAATAAAA+TGG 0.215449 8_4:+11690028 Msa1313610:three_prime_UTR
ACAATACTTACTTGTAATTA+AGG 0.221344 8_4:-11689725 None:intergenic
ATGTAAGTAAGAGGACATTT+TGG 0.296841 8_4:-11689897 None:intergenic
CTTTCTGGATTAAATTCTTC+CGG 0.306481 8_4:-11689365 None:intergenic
AGACAGTTGTCTGTTGGTTT+AGG 0.309282 8_4:-11689927 None:intergenic
AGTAGTACTTTCCATCCTTT+TGG 0.322330 8_4:-11689299 None:intergenic
ACATTTCTTCCCTTTGGAAT+AGG 0.342723 8_4:+11689636 Msa1313610:CDS
GGAAGAAATGTTCCTGTTGT+AGG 0.358226 8_4:-11689624 None:intergenic
CTATGCAACTGATAGAAGTT+TGG 0.365871 8_4:+11690292 Msa1313610:three_prime_UTR
ACAGGAACATTTCTTCCCTT+TGG 0.369888 8_4:+11689630 Msa1313610:CDS
TTGTCTGTTGGTTTAGGAAC+TGG 0.386955 8_4:-11689921 None:intergenic
GATGAAATGGTGTAGAAATA+TGG 0.398494 8_4:-11689703 None:intergenic
ACTTGTAATTAAGGATGAAA+TGG 0.408580 8_4:-11689716 None:intergenic
AAGCTGAAAAGTTACTGATA+TGG 0.418256 8_4:-11689141 None:intergenic
TCCGGATTTGGATGATGCTC+AGG 0.425004 8_4:-11689347 None:intergenic
AAATATGGTCATTTCAAGTC+TGG 0.455910 8_4:-11689688 None:intergenic
TTAGGTTATTTCATACCAAA+AGG 0.463337 8_4:+11689284 Msa1313610:intron
TTGGCTAAGAGCGGTTCATA+TGG 0.466054 8_4:+11689322 Msa1313610:CDS
GTTATTTCATACCAAAAGGA+TGG 0.482217 8_4:+11689288 Msa1313610:CDS
TAGGATTACAACCCTACAAC+AGG 0.482292 8_4:+11689612 Msa1313610:intron
AGTCTGGCTAGGTCACTTCC+TGG 0.485183 8_4:-11689672 None:intergenic
AAGGATGGAAAGTACTACTT+TGG 0.486864 8_4:+11689303 Msa1313610:CDS
TCCTGAGCATCATCCAAATC+CGG 0.493825 8_4:+11689346 Msa1313610:CDS
GAAGAAATGTTCCTGTTGTA+GGG 0.494338 8_4:-11689623 None:intergenic
AAGAATTTAATCCAGAAAGA+TGG 0.500476 8_4:+11689369 Msa1313610:CDS
TGTGAGATTTATTTATCAAG+TGG 0.515751 8_4:+11690121 Msa1313610:three_prime_UTR
GGAACTGGTATGTAAGTAAG+AGG 0.516228 8_4:-11689906 None:intergenic
TCTTAAATTGTAATTCATTG+AGG 0.527811 8_4:+11689977 Msa1313610:exon
GCAACTGATGTGAACATCAA+TGG 0.539722 8_4:+11689175 Msa1313610:CDS
GTGTCGCGAGCCTATTCCAA+AGG 0.566028 8_4:-11689646 None:intergenic
TTAGCGAGACAGTTGTCTGT+TGG 0.573999 8_4:-11689933 None:intergenic
GAATTACAATTTAAGATCAC+CGG 0.579041 8_4:-11689970 None:intergenic
TGGTCATTTCAAGTCTGGCT+AGG 0.583521 8_4:-11689683 None:intergenic
AACAGACAACTGTCTCGCTA+AGG 0.597900 8_4:+11689935 Msa1313610:CDS
TGTCGCGAGCCTATTCCAAA+GGG 0.598285 8_4:-11689645 None:intergenic
GCTAAGGTTATAAAGCTCTC+CGG 0.610602 8_4:+11689951 Msa1313610:CDS
AGTACTACTTTGGCTAAGAG+CGG 0.654612 8_4:+11689313 Msa1313610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAGGAAACTAAAAAAA+TGG + chr8_4:11688941-11688960 Msa1313610:CDS 15.0%
!! ATGAATTATATATAGACAAT+AGG - chr8_4:11689001-11689020 None:intergenic 15.0%
!!! ATGTCTTTGTTAAATATTTT+AGG + chr8_4:11689266-11689285 Msa1313610:intron 15.0%
!! AACAAAAATAAGTTTAATGA+AGG - chr8_4:11689500-11689519 None:intergenic 15.0%
!!! CTAATTTATTTTTCTTTTCA+AGG + chr8_4:11689802-11689821 Msa1313610:intron 15.0%
!!! CTTTTTCTTCTTAATTTTAT+AGG + chr8_4:11689859-11689878 Msa1313610:intron 15.0%
!! TATTAAGGAAACTAAAAAAA+TGG + chr8_4:11688941-11688960 Msa1313610:CDS 15.0%
!! ATGAATTATATATAGACAAT+AGG - chr8_4:11689001-11689020 None:intergenic 15.0%
!!! ATGTCTTTGTTAAATATTTT+AGG + chr8_4:11689266-11689285 Msa1313610:intron 15.0%
!! AACAAAAATAAGTTTAATGA+AGG - chr8_4:11689500-11689519 None:intergenic 15.0%
!!! CTAATTTATTTTTCTTTTCA+AGG + chr8_4:11689802-11689821 Msa1313610:intron 15.0%
!!! CTTTTTCTTCTTAATTTTAT+AGG + chr8_4:11689859-11689878 Msa1313610:intron 15.0%
!!! ACTCTATTTCTTGTTATTTT+CGG + chr8_4:11689216-11689235 Msa1313610:intron 20.0%
!!! TGTTATTTTCGGTTATTAAA+AGG + chr8_4:11689227-11689246 Msa1313610:intron 20.0%
!!! GTTATTTTCGGTTATTAAAA+GGG + chr8_4:11689228-11689247 Msa1313610:intron 20.0%
!! AGTAATTGTTAAACTCAAAT+TGG - chr8_4:11689447-11689466 None:intergenic 20.0%
!! ACAATACTTACTTGTAATTA+AGG - chr8_4:11689728-11689747 None:intergenic 20.0%
!! TCTTAAATTGTAATTCATTG+AGG + chr8_4:11689977-11689996 Msa1313610:exon 20.0%
!! TCTAACATGCATAAATAAAA+TGG + chr8_4:11690028-11690047 Msa1313610:three_prime_UTR 20.0%
!! CAATAGTAAAAAAATACTTG+TGG - chr8_4:11690065-11690084 None:intergenic 20.0%
!!! CACAAGTATTTTTTTACTAT+TGG + chr8_4:11690063-11690082 Msa1313610:three_prime_UTR 20.0%
!!! ACTCTATTTCTTGTTATTTT+CGG + chr8_4:11689216-11689235 Msa1313610:intron 20.0%
!!! TGTTATTTTCGGTTATTAAA+AGG + chr8_4:11689227-11689246 Msa1313610:intron 20.0%
!!! GTTATTTTCGGTTATTAAAA+GGG + chr8_4:11689228-11689247 Msa1313610:intron 20.0%
!! AGTAATTGTTAAACTCAAAT+TGG - chr8_4:11689447-11689466 None:intergenic 20.0%
!! ACAATACTTACTTGTAATTA+AGG - chr8_4:11689728-11689747 None:intergenic 20.0%
!! TCTTAAATTGTAATTCATTG+AGG + chr8_4:11689977-11689996 Msa1313610:exon 20.0%
!! TCTAACATGCATAAATAAAA+TGG + chr8_4:11690028-11690047 Msa1313610:three_prime_UTR 20.0%
!! CAATAGTAAAAAAATACTTG+TGG - chr8_4:11690065-11690084 None:intergenic 20.0%
!!! CACAAGTATTTTTTTACTAT+TGG + chr8_4:11690063-11690082 Msa1313610:three_prime_UTR 20.0%
!! GCAAAAACGATTTTGTATTA+AGG + chr8_4:11688926-11688945 Msa1313610:CDS 25.0%
! AAAAAATGGTATATCTCTCT+CGG + chr8_4:11688955-11688974 Msa1313610:CDS 25.0%
! GAAAATAACAAGAAATAGAG+TGG - chr8_4:11689217-11689236 None:intergenic 25.0%
!! TTAGGTTATTTCATACCAAA+AGG + chr8_4:11689284-11689303 Msa1313610:intron 25.0%
! AAGAATTTAATCCAGAAAGA+TGG + chr8_4:11689369-11689388 Msa1313610:CDS 25.0%
! TGAGTTTAACAATTACTAAG+AGG + chr8_4:11689450-11689469 Msa1313610:intron 25.0%
! TTGAGTTATTGTGTTAATTG+AGG + chr8_4:11689569-11689588 Msa1313610:intron 25.0%
! ACTTGTAATTAAGGATGAAA+TGG - chr8_4:11689719-11689738 None:intergenic 25.0%
!! GAATTACAATTTAAGATCAC+CGG - chr8_4:11689973-11689992 None:intergenic 25.0%
! TGTGAGATTTATTTATCAAG+TGG + chr8_4:11690121-11690140 Msa1313610:three_prime_UTR 25.0%
!! GCTTTTTATAGATACAAACT+AGG - chr8_4:11690216-11690235 None:intergenic 25.0%
!! GCAAAAACGATTTTGTATTA+AGG + chr8_4:11688926-11688945 Msa1313610:CDS 25.0%
! AAAAAATGGTATATCTCTCT+CGG + chr8_4:11688955-11688974 Msa1313610:CDS 25.0%
! GAAAATAACAAGAAATAGAG+TGG - chr8_4:11689217-11689236 None:intergenic 25.0%
!! TTAGGTTATTTCATACCAAA+AGG + chr8_4:11689284-11689303 Msa1313610:intron 25.0%
! AAGAATTTAATCCAGAAAGA+TGG + chr8_4:11689369-11689388 Msa1313610:CDS 25.0%
! TGAGTTTAACAATTACTAAG+AGG + chr8_4:11689450-11689469 Msa1313610:intron 25.0%
! TTGAGTTATTGTGTTAATTG+AGG + chr8_4:11689569-11689588 Msa1313610:intron 25.0%
! ACTTGTAATTAAGGATGAAA+TGG - chr8_4:11689719-11689738 None:intergenic 25.0%
!! GAATTACAATTTAAGATCAC+CGG - chr8_4:11689973-11689992 None:intergenic 25.0%
! TGTGAGATTTATTTATCAAG+TGG + chr8_4:11690121-11690140 Msa1313610:three_prime_UTR 25.0%
!! GCTTTTTATAGATACAAACT+AGG - chr8_4:11690216-11690235 None:intergenic 25.0%
!! AATACAAAATCGTTTTTGCG+AGG - chr8_4:11688925-11688944 None:intergenic 30.0%
AAAAATGGTATATCTCTCTC+GGG + chr8_4:11688956-11688975 Msa1313610:CDS 30.0%
AAGCTGAAAAGTTACTGATA+TGG - chr8_4:11689144-11689163 None:intergenic 30.0%
! TCAGTAACTTTTCAGCTTTT+CGG + chr8_4:11689146-11689165 Msa1313610:CDS 30.0%
AATAACAAGAAATAGAGTGG+AGG - chr8_4:11689214-11689233 None:intergenic 30.0%
! GTTATTTCATACCAAAAGGA+TGG + chr8_4:11689288-11689307 Msa1313610:CDS 30.0%
CTTTCTGGATTAAATTCTTC+CGG - chr8_4:11689368-11689387 None:intergenic 30.0%
! ATGATGTTGATTATGTGCTT+AGG + chr8_4:11689593-11689612 Msa1313610:intron 30.0%
! AAATATGGTCATTTCAAGTC+TGG - chr8_4:11689691-11689710 None:intergenic 30.0%
GATGAAATGGTGTAGAAATA+TGG - chr8_4:11689706-11689725 None:intergenic 30.0%
! ATGTAAGTAAGAGGACATTT+TGG - chr8_4:11689900-11689919 None:intergenic 30.0%
!! AATACAAAATCGTTTTTGCG+AGG - chr8_4:11688925-11688944 None:intergenic 30.0%
AAAAATGGTATATCTCTCTC+GGG + chr8_4:11688956-11688975 Msa1313610:CDS 30.0%
AAGCTGAAAAGTTACTGATA+TGG - chr8_4:11689144-11689163 None:intergenic 30.0%
! TCAGTAACTTTTCAGCTTTT+CGG + chr8_4:11689146-11689165 Msa1313610:CDS 30.0%
AATAACAAGAAATAGAGTGG+AGG - chr8_4:11689214-11689233 None:intergenic 30.0%
! GTTATTTCATACCAAAAGGA+TGG + chr8_4:11689288-11689307 Msa1313610:CDS 30.0%
CTTTCTGGATTAAATTCTTC+CGG - chr8_4:11689368-11689387 None:intergenic 30.0%
! ATGATGTTGATTATGTGCTT+AGG + chr8_4:11689593-11689612 Msa1313610:intron 30.0%
! AAATATGGTCATTTCAAGTC+TGG - chr8_4:11689691-11689710 None:intergenic 30.0%
GATGAAATGGTGTAGAAATA+TGG - chr8_4:11689706-11689725 None:intergenic 30.0%
! ATGTAAGTAAGAGGACATTT+TGG - chr8_4:11689900-11689919 None:intergenic 30.0%
GTTTCATCAATAACCTGCTA+GGG - chr8_4:11689115-11689134 None:intergenic 35.0%
TGTTTCATCAATAACCTGCT+AGG - chr8_4:11689116-11689135 None:intergenic 35.0%
! TAACTTTTCAGCTTTTCGGA+AGG + chr8_4:11689150-11689169 Msa1313610:CDS 35.0%
! AGTAGTACTTTCCATCCTTT+TGG - chr8_4:11689302-11689321 None:intergenic 35.0%
!! AAGGATGGAAAGTACTACTT+TGG + chr8_4:11689303-11689322 Msa1313610:CDS 35.0%
GGATTAAATTCTTCCGGATT+TGG - chr8_4:11689362-11689381 None:intergenic 35.0%
CTACTTACATTCCATCTTTC+TGG - chr8_4:11689383-11689402 None:intergenic 35.0%
CAGAAAGATGGAATGTAAGT+AGG + chr8_4:11689381-11689400 Msa1313610:intron 35.0%
GAAGAAATGTTCCTGTTGTA+GGG - chr8_4:11689626-11689645 None:intergenic 35.0%
!! ACATTTCTTCCCTTTGGAAT+AGG + chr8_4:11689636-11689655 Msa1313610:CDS 35.0%
CTATGCAACTGATAGAAGTT+TGG + chr8_4:11690292-11690311 Msa1313610:three_prime_UTR 35.0%
GTTTCATCAATAACCTGCTA+GGG - chr8_4:11689115-11689134 None:intergenic 35.0%
TGTTTCATCAATAACCTGCT+AGG - chr8_4:11689116-11689135 None:intergenic 35.0%
! TAACTTTTCAGCTTTTCGGA+AGG + chr8_4:11689150-11689169 Msa1313610:CDS 35.0%
! AGTAGTACTTTCCATCCTTT+TGG - chr8_4:11689302-11689321 None:intergenic 35.0%
!! AAGGATGGAAAGTACTACTT+TGG + chr8_4:11689303-11689322 Msa1313610:CDS 35.0%
GGATTAAATTCTTCCGGATT+TGG - chr8_4:11689362-11689381 None:intergenic 35.0%
CTACTTACATTCCATCTTTC+TGG - chr8_4:11689383-11689402 None:intergenic 35.0%
CAGAAAGATGGAATGTAAGT+AGG + chr8_4:11689381-11689400 Msa1313610:intron 35.0%
GAAGAAATGTTCCTGTTGTA+GGG - chr8_4:11689626-11689645 None:intergenic 35.0%
!! ACATTTCTTCCCTTTGGAAT+AGG + chr8_4:11689636-11689655 Msa1313610:CDS 35.0%
CTATGCAACTGATAGAAGTT+TGG + chr8_4:11690292-11690311 Msa1313610:three_prime_UTR 35.0%
!! CAAAATCGTTTTTGCGAGGA+TGG - chr8_4:11688921-11688940 None:intergenic 40.0%
!!! GATTTTTTTCCTACCCTAGC+AGG + chr8_4:11689099-11689118 Msa1313610:intron 40.0%
GCAACTGATGTGAACATCAA+TGG + chr8_4:11689175-11689194 Msa1313610:CDS 40.0%
AGTACTACTTTGGCTAAGAG+CGG + chr8_4:11689313-11689332 Msa1313610:CDS 40.0%
TAGGATTACAACCCTACAAC+AGG + chr8_4:11689612-11689631 Msa1313610:intron 40.0%
GGAAGAAATGTTCCTGTTGT+AGG - chr8_4:11689627-11689646 None:intergenic 40.0%
ACAGGAACATTTCTTCCCTT+TGG + chr8_4:11689630-11689649 Msa1313610:CDS 40.0%
GGAACTGGTATGTAAGTAAG+AGG - chr8_4:11689909-11689928 None:intergenic 40.0%
!! TTGTCTGTTGGTTTAGGAAC+TGG - chr8_4:11689924-11689943 None:intergenic 40.0%
!! AGACAGTTGTCTGTTGGTTT+AGG - chr8_4:11689930-11689949 None:intergenic 40.0%
GCTAAGGTTATAAAGCTCTC+CGG + chr8_4:11689951-11689970 Msa1313610:CDS 40.0%
! AGAAGTTTGGAAAGTGTACC+AGG + chr8_4:11690305-11690324 Msa1313610:three_prime_UTR 40.0%
!! CAAAATCGTTTTTGCGAGGA+TGG - chr8_4:11688921-11688940 None:intergenic 40.0%
!!! GATTTTTTTCCTACCCTAGC+AGG + chr8_4:11689099-11689118 Msa1313610:intron 40.0%
GCAACTGATGTGAACATCAA+TGG + chr8_4:11689175-11689194 Msa1313610:CDS 40.0%
AGTACTACTTTGGCTAAGAG+CGG + chr8_4:11689313-11689332 Msa1313610:CDS 40.0%
TAGGATTACAACCCTACAAC+AGG + chr8_4:11689612-11689631 Msa1313610:intron 40.0%
GGAAGAAATGTTCCTGTTGT+AGG - chr8_4:11689627-11689646 None:intergenic 40.0%
ACAGGAACATTTCTTCCCTT+TGG + chr8_4:11689630-11689649 Msa1313610:CDS 40.0%
GGAACTGGTATGTAAGTAAG+AGG - chr8_4:11689909-11689928 None:intergenic 40.0%
!! TTGTCTGTTGGTTTAGGAAC+TGG - chr8_4:11689924-11689943 None:intergenic 40.0%
!! AGACAGTTGTCTGTTGGTTT+AGG - chr8_4:11689930-11689949 None:intergenic 40.0%
GCTAAGGTTATAAAGCTCTC+CGG + chr8_4:11689951-11689970 Msa1313610:CDS 40.0%
CATCAATAACCTGCTAGGGT+AGG - chr8_4:11689111-11689130 None:intergenic 45.0%
! CTTTTCAGCTTTTCGGAAGG+CGG + chr8_4:11689153-11689172 Msa1313610:CDS 45.0%
TTGGCTAAGAGCGGTTCATA+TGG + chr8_4:11689322-11689341 Msa1313610:CDS 45.0%
TCCTGAGCATCATCCAAATC+CGG + chr8_4:11689346-11689365 Msa1313610:CDS 45.0%
! TGGTCATTTCAAGTCTGGCT+AGG - chr8_4:11689686-11689705 None:intergenic 45.0%
TTAGCGAGACAGTTGTCTGT+TGG - chr8_4:11689936-11689955 None:intergenic 45.0%
AACAGACAACTGTCTCGCTA+AGG + chr8_4:11689935-11689954 Msa1313610:CDS 45.0%
CATCAATAACCTGCTAGGGT+AGG - chr8_4:11689111-11689130 None:intergenic 45.0%
! CTTTTCAGCTTTTCGGAAGG+CGG + chr8_4:11689153-11689172 Msa1313610:CDS 45.0%
TTGGCTAAGAGCGGTTCATA+TGG + chr8_4:11689322-11689341 Msa1313610:CDS 45.0%
TCCTGAGCATCATCCAAATC+CGG + chr8_4:11689346-11689365 Msa1313610:CDS 45.0%
! TGGTCATTTCAAGTCTGGCT+AGG - chr8_4:11689686-11689705 None:intergenic 45.0%
TTAGCGAGACAGTTGTCTGT+TGG - chr8_4:11689936-11689955 None:intergenic 45.0%
AACAGACAACTGTCTCGCTA+AGG + chr8_4:11689935-11689954 Msa1313610:CDS 45.0%
TCCGGATTTGGATGATGCTC+AGG - chr8_4:11689350-11689369 None:intergenic 50.0%
TGTCGCGAGCCTATTCCAAA+GGG - chr8_4:11689648-11689667 None:intergenic 50.0%
TCCGGATTTGGATGATGCTC+AGG - chr8_4:11689350-11689369 None:intergenic 50.0%
TGTCGCGAGCCTATTCCAAA+GGG - chr8_4:11689648-11689667 None:intergenic 50.0%
GTGTCGCGAGCCTATTCCAA+AGG - chr8_4:11689649-11689668 None:intergenic 55.0%
AGTCTGGCTAGGTCACTTCC+TGG - chr8_4:11689675-11689694 None:intergenic 55.0%
GTGTCGCGAGCCTATTCCAA+AGG - chr8_4:11689649-11689668 None:intergenic 55.0%
AGTCTGGCTAGGTCACTTCC+TGG - chr8_4:11689675-11689694 None:intergenic 55.0%
ATAGGCTCGCGACACTGTCC+AGG + chr8_4:11689654-11689673 Msa1313610:CDS 60.0%
ATAGGCTCGCGACACTGTCC+AGG + chr8_4:11689654-11689673 Msa1313610:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 11688888 11690326 11688888 ID=Msa1313610;Name=Msa1313610
chr8_4 mRNA 11688888 11690326 11688888 ID=Msa1313610-mRNA-1;Parent=Msa1313610;Name=Msa1313610-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.8|1|1|1|5|337|167
chr8_4 exon 11688888 11688977 11688888 ID=Msa1313610-mRNA-1:exon:4400;Parent=Msa1313610-mRNA-1
chr8_4 exon 11689121 11689196 11689121 ID=Msa1313610-mRNA-1:exon:4401;Parent=Msa1313610-mRNA-1
chr8_4 exon 11689288 11689394 11689288 ID=Msa1313610-mRNA-1:exon:4402;Parent=Msa1313610-mRNA-1
chr8_4 exon 11689615 11689736 11689615 ID=Msa1313610-mRNA-1:exon:4403;Parent=Msa1313610-mRNA-1
chr8_4 exon 11689881 11690326 11689881 ID=Msa1313610-mRNA-1:exon:4404;Parent=Msa1313610-mRNA-1
chr8_4 CDS 11688888 11688977 11688888 ID=Msa1313610-mRNA-1:cds;Parent=Msa1313610-mRNA-1
chr8_4 CDS 11689121 11689196 11689121 ID=Msa1313610-mRNA-1:cds;Parent=Msa1313610-mRNA-1
chr8_4 CDS 11689288 11689394 11689288 ID=Msa1313610-mRNA-1:cds;Parent=Msa1313610-mRNA-1
chr8_4 CDS 11689615 11689736 11689615 ID=Msa1313610-mRNA-1:cds;Parent=Msa1313610-mRNA-1
chr8_4 CDS 11689881 11689989 11689881 ID=Msa1313610-mRNA-1:cds;Parent=Msa1313610-mRNA-1
chr8_4 three_prime_UTR 11689990 11690326 11689990 ID=Msa1313610-mRNA-1:three_prime_utr;Parent=Msa1313610-mRNA-1
Gene Sequence

>Msa1313610

GAAGAGCAAGAAGATATCTTGAAAGCAAGACCATCCTCGCAAAAACGATTTTGTATTAAGGAAACTAAAAAAATGGTATATCTCTCTCGGGTTATTGATGAAACATTGCGCCATATCAGTAACTTTTCAGCTTTTCGGAAGGCGGCAACTGATGTGAACATCAATGGTTATTTCATACCAAAAGGATGGAAAGTACTACTTTGGCTAAGAGCGGTTCATATGGATCCTGAGCATCATCCAAATCCGGAAGAATTTAATCCAGAAAGATGGAATGATTACAACCCTACAACAGGAACATTTCTTCCCTTTGGAATAGGCTCGCGACACTGTCCAGGAAGTGACCTAGCCAGACTTGAAATGACCATATTTCTACACCATTTCATCCTTAATTACAAGTTTGAGCGAATAAATCCAAAATGTCCTCTTACTTACATACCAGTTCCTAAACCAACAGACAACTGTCTCGCTAAGGTTATAAAGCTCTCCGGTGATCTTAAATTGTAA
Protein sequence

>Msa1313610

EEQEDILKARPSSQKRFCIKETKKMVYLSRVIDETLRHISNFSAFRKAATDVNINGYFIPKGWKVLLWLRAVHMDPEHHPNPEEFNPERWNDYNPTTGTFLPFGIGSRHCPGSDLARLEMTIFLHHFILNYKFERINPKCPLTYIPVPKPTDNCLAKVIKLSGDLKL*