AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1275410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275410 MtrunA17_Chr8g0339861 72.840 162 44 0 1 162 326 487 7.23e-85 257
Msa1275410 MtrunA17_Chr8g0381541 67.485 163 52 1 1 162 328 490 2.32e-79 243
Msa1275410 MtrunA17_Chr5g0400421 62.577 163 60 1 1 162 329 491 1.59e-74 231
Msa1275410 MtrunA17_Chr5g0400411 61.350 163 62 1 1 162 328 490 4.51e-74 229
Msa1275410 MtrunA17_Chr4g0000151 71.970 132 37 0 31 162 12 143 2.31e-73 216
Msa1275410 MtrunA17_Chr2g0293411 58.282 163 67 1 1 162 326 488 1.38e-67 213
Msa1275410 MtrunA17_Chr2g0293421 57.669 163 67 2 1 162 328 489 4.34e-65 206
Msa1275410 MtrunA17_Chr8g0381571 66.165 133 44 1 1 132 328 460 6.35e-62 198
Msa1275410 MtrunA17_Chr8g0381561 63.636 110 39 1 24 132 2 111 4.79e-52 162
Msa1275410 MtrunA17_Chr1g0161661 65.169 89 31 0 73 161 12 100 4.46e-43 138
Msa1275410 MtrunA17_Chr5g0400391 63.218 87 32 0 74 160 1 87 4.79e-40 131
Msa1275410 MtrunA17_Chr3g0089361 40.373 161 92 3 3 161 319 477 9.63e-37 132
Msa1275410 MtrunA17_Chr3g0089351 39.130 161 94 3 3 161 237 395 1.72e-35 127
Msa1275410 MtrunA17_Chr1g0161641 58.228 79 33 0 54 132 10 88 2.81e-32 110
Msa1275410 MtrunA17_Chr5g0408181 41.667 156 87 3 1 153 301 455 1.27e-31 117
Msa1275410 MtrunA17_Chr8g0369791 39.744 156 90 3 1 153 303 457 1.05e-30 115
Msa1275410 MtrunA17_Chr1g0153371 39.130 138 82 2 21 157 329 465 3.98e-30 114
Msa1275410 MtrunA17_Chr5g0404861 45.946 111 57 2 27 134 24 134 2.83e-29 105
Msa1275410 MtrunA17_Chr5g0403931 45.000 140 70 4 1 134 315 453 4.17e-29 111
Msa1275410 MtrunA17_Chr7g0226771 42.520 127 70 2 20 144 329 454 8.99e-29 110
Msa1275410 MtrunA17_Chr4g0044851 40.299 134 78 2 21 153 330 462 1.17e-28 110
Msa1275410 MtrunA17_Chr8g0341951 42.537 134 72 3 4 133 314 446 2.73e-28 108
Msa1275410 MtrunA17_Chr5g0437001 40.152 132 75 2 25 152 1 132 1.12e-27 101
Msa1275410 MtrunA17_Chr4g0044841 38.411 151 90 3 2 150 312 461 1.59e-27 107
Msa1275410 MtrunA17_Chr1g0164371 39.623 159 94 2 1 158 316 473 3.08e-26 103
Msa1275410 MtrunA17_Chr8g0388921 35.714 154 97 2 1 153 317 469 5.11e-26 102
Msa1275410 MtrunA17_Chr8g0372411 42.857 126 67 3 27 149 343 466 5.24e-26 102
Msa1275410 MtrunA17_Chr3g0113321 41.045 134 72 3 1 128 304 436 1.21e-25 101
Msa1275410 MtrunA17_Chr3g0107501 34.416 154 98 2 1 151 314 467 1.90e-25 101
Msa1275410 MtrunA17_Chr5g0397971 37.143 140 83 3 1 136 308 446 4.70e-25 100
Msa1275410 MtrunA17_Chr5g0443731 33.125 160 103 4 1 158 311 468 4.24e-24 97.4
Msa1275410 MtrunA17_Chr3g0107511 37.013 154 94 3 1 151 314 467 5.97e-24 97.1
Msa1275410 MtrunA17_Chr3g0078411 35.606 132 83 2 21 150 323 454 2.06e-23 95.5
Msa1275410 MtrunA17_Chr6g0455461 36.364 132 82 2 21 150 323 454 2.19e-23 95.5
Msa1275410 MtrunA17_Chr5g0443401 35.821 134 84 2 19 151 335 467 1.47e-22 93.2
Msa1275410 MtrunA17_Chr8g0380471 35.294 136 87 1 20 154 334 469 4.67e-22 91.7
Msa1275410 MtrunA17_Chr7g0219961 34.848 132 84 2 21 150 322 453 1.11e-21 90.5
Msa1275410 MtrunA17_Chr3g0141801 36.719 128 77 3 17 142 339 464 3.02e-21 89.4
Msa1275410 MtrunA17_Chr8g0380931 31.757 148 99 2 9 154 351 498 1.04e-20 87.8
Msa1275410 MtrunA17_Chr6g0478161 31.646 158 94 5 12 157 334 489 1.63e-20 87.4
Msa1275410 MtrunA17_Chr6g0463541 42.353 85 48 1 52 136 2 85 4.53e-19 77.8
Msa1275410 MtrunA17_Chr6g0451811 35.152 165 82 6 15 154 44 208 5.54e-18 77.4
Msa1275410 MtrunA17_Chr8g0372711 31.507 146 83 3 20 149 343 487 1.89e-16 75.9
Msa1275410 MtrunA17_Chr6g0466941 38.060 134 69 4 8 127 350 483 1.24e-15 73.6
Msa1275410 MtrunA17_Chr6g0458561 32.886 149 88 3 15 151 369 517 2.22e-15 72.8
Msa1275410 MtrunA17_Chr5g0395321 32.653 147 88 3 1 141 330 471 8.63e-15 70.9
Msa1275410 MtrunA17_Chr6g0466901 37.209 129 67 4 13 127 354 482 1.38e-14 70.5
Msa1275410 MtrunA17_Chr5g0395381 31.293 147 90 3 1 141 305 446 7.44e-14 68.2
Msa1275410 MtrunA17_Chr4g0035921 35.772 123 69 4 15 127 355 477 8.90e-14 68.2
Msa1275410 MtrunA17_Chr6g0451691 29.452 146 93 3 1 138 355 498 1.31e-13 67.4
Msa1275410 MtrunA17_Chr5g0401691 33.594 128 66 4 21 137 361 480 1.60e-13 67.4
Msa1275410 MtrunA17_Chr3g0082701 33.333 141 75 5 1 127 355 490 1.97e-13 67.0
Msa1275410 MtrunA17_Chr8g0346261 32.258 155 85 6 20 165 391 534 2.77e-13 66.6
Msa1275410 MtrunA17_Chr4g0053621 31.092 119 79 2 21 137 350 467 2.78e-13 66.6
Msa1275410 MtrunA17_Chr3g0116741 40.816 98 52 2 21 112 363 460 2.93e-13 66.6
Msa1275410 MtrunA17_Chr5g0395331 34.646 127 77 2 21 141 352 478 3.21e-13 66.2
Msa1275410 MtrunA17_Chr1g0151221 35.897 117 61 4 27 133 385 497 3.24e-13 66.2
Msa1275410 MtrunA17_Chr3g0101631 35.043 117 66 3 21 127 344 460 3.28e-13 66.2
Msa1275410 MtrunA17_Chr3g0135841 35.593 118 66 3 24 133 390 505 3.42e-13 66.2
Msa1275410 MtrunA17_Chr6g0451681 32.353 136 82 3 15 140 316 451 3.98e-13 66.2
Msa1275410 MtrunA17_Chr5g0403321 35.897 117 65 3 21 127 354 470 7.25e-13 65.5
Msa1275410 MtrunA17_Chr8g0364081 29.457 129 81 5 23 142 396 523 8.12e-13 65.5
Msa1275410 MtrunA17_Chr2g0314781 32.484 157 91 5 1 147 17 168 8.25e-13 63.2
Msa1275410 MtrunA17_Chr1g0164211 35.433 127 76 2 21 141 342 468 1.20e-12 64.7
Msa1275410 MtrunA17_Chr3g0101611 31.667 120 76 2 24 137 354 473 1.28e-12 64.7
Msa1275410 MtrunA17_Chr8g0372251 34.615 104 62 2 15 112 347 450 1.34e-12 64.7
Msa1275410 MtrunA17_Chr6g0463791 35.938 128 69 4 13 127 336 463 1.94e-12 64.3
Msa1275410 MtrunA17_Chr7g0258211 35.965 114 57 3 19 116 348 461 2.05e-12 63.9
Msa1275410 MtrunA17_Chr3g0101721 35.000 120 65 4 18 127 351 467 2.12e-12 63.9
Msa1275410 MtrunA17_Chr4g0039391 33.607 122 76 2 21 137 351 472 2.57e-12 63.9
Msa1275410 MtrunA17_Chr5g0431501 33.058 121 75 3 20 134 349 469 2.94e-12 63.5
Msa1275410 MtrunA17_Chr5g0431461 33.058 121 75 3 20 134 349 469 2.94e-12 63.5
Msa1275410 MtrunA17_Chr4g0058261 36.275 102 59 2 21 116 379 480 3.25e-12 63.5
Msa1275410 MtrunA17_Chr4g0047641 37.168 113 61 3 25 127 368 480 3.91e-12 63.2
Msa1275410 MtrunA17_Chr4g0058211 31.405 121 77 2 20 134 65 185 4.01e-12 62.0
Msa1275410 MtrunA17_Chr8g0373441 47.887 71 34 2 23 91 335 404 4.98e-12 62.8
Msa1275410 MtrunA17_Chr7g0235261 31.746 126 76 4 23 140 365 488 5.08e-12 62.8
Msa1275410 MtrunA17_Chr2g0314731 32.484 157 91 5 1 147 330 481 5.27e-12 62.8
Msa1275410 MtrunA17_Chr6g0463801 37.500 104 59 2 23 120 347 450 5.91e-12 62.8
Msa1275410 MtrunA17_Chr3g0101621 33.898 118 67 3 21 127 338 455 7.12e-12 62.4
Msa1275410 MtrunA17_Chr8g0339331 30.986 142 87 3 1 134 345 483 7.15e-12 62.4
Msa1275410 MtrunA17_Chr3g0101821 36.667 120 63 4 18 127 349 465 8.04e-12 62.4
Msa1275410 MtrunA17_Chr7g0218601 38.318 107 59 3 21 120 348 454 9.52e-12 62.0
Msa1275410 MtrunA17_Chr3g0101671 35.135 111 62 4 27 127 359 469 9.57e-12 62.0
Msa1275410 MtrunA17_Chr7g0215181 31.469 143 83 4 6 133 338 480 1.09e-11 62.0
Msa1275410 MtrunA17_Chr8g0362731 32.540 126 75 4 23 140 263 386 1.16e-11 62.0
Msa1275410 MtrunA17_Chr8g0351801 37.383 107 52 2 25 116 361 467 1.17e-11 62.0
Msa1275410 MtrunA17_Chr6g0451641 34.615 130 72 4 21 137 364 493 1.17e-11 62.0
Msa1275410 MtrunA17_Chr4g0058191 31.405 121 77 2 20 134 337 457 1.19e-11 62.0
Msa1275410 MtrunA17_Chr1g0160851 37.719 114 65 2 27 134 351 464 1.20e-11 62.0
Msa1275410 MtrunA17_Chr8g0361471 36.036 111 61 4 27 127 355 465 1.20e-11 62.0
Msa1275410 MtrunA17_Chr4g0047661 40.426 94 50 2 25 112 369 462 1.23e-11 62.0
Msa1275410 MtrunA17_Chr4g0047631 36.441 118 65 4 20 127 359 476 1.58e-11 61.6
Msa1275410 MtrunA17_Chr1g0160861 37.719 114 65 2 27 134 192 305 1.79e-11 61.2
Msa1275410 MtrunA17_Chr5g0446151 33.333 120 75 2 20 134 349 468 1.79e-11 61.2
Msa1275410 MtrunA17_Chr3g0101541 34.783 115 65 3 23 127 2 116 2.10e-11 58.5
Msa1275410 MtrunA17_Chr3g0101731 35.000 120 65 4 18 127 349 465 2.26e-11 61.2
Msa1275410 MtrunA17_Chr1g0162811 33.628 113 66 3 24 127 352 464 2.39e-11 60.8
Msa1275410 MtrunA17_Chr6g0465511 36.036 111 61 4 27 127 355 465 2.64e-11 60.8
Msa1275410 MtrunA17_Chr6g0466331 36.036 111 61 4 27 127 355 465 2.66e-11 60.8
Msa1275410 MtrunA17_Chr4g0046701 31.034 116 68 3 24 127 9 124 2.91e-11 58.5
Msa1275410 MtrunA17_Chr5g0413911 30.216 139 89 3 7 137 363 501 3.14e-11 60.8
Msa1275410 MtrunA17_Chr3g0094171 32.215 149 84 6 2 141 338 478 3.53e-11 60.5
Msa1275410 MtrunA17_Chr3g0101811 33.871 124 71 4 18 133 364 484 3.61e-11 60.5
Msa1275410 MtrunA17_Chr2g0280061 29.371 143 92 4 1 134 39 181 3.83e-11 59.3
Msa1275410 MtrunA17_Chr1g0176831 33.577 137 81 4 21 147 375 511 4.00e-11 60.5
Msa1275410 MtrunA17_Chr6g0451751 31.847 157 84 6 21 154 371 527 4.10e-11 60.5
Msa1275410 MtrunA17_Chr4g0046331 34.579 107 55 2 46 138 374 479 4.54e-11 60.1
Msa1275410 MtrunA17_Chr5g0446161 32.500 120 76 2 20 134 348 467 4.63e-11 60.1
Msa1275410 MtrunA17_Chr7g0265611 32.824 131 80 2 21 143 363 493 4.89e-11 60.1
Msa1275410 MtrunA17_Chr5g0430131 31.967 122 76 3 20 134 349 470 5.06e-11 60.1
Msa1275410 MtrunA17_Chr3g0101651 34.127 126 71 6 14 127 344 469 5.16e-11 60.1
Msa1275410 MtrunA17_Chr1g0174431 35.043 117 63 4 13 116 39 155 5.57e-11 58.9
Msa1275410 MtrunA17_Chr4g0058281 34.314 102 61 2 21 116 361 462 5.59e-11 60.1
Msa1275410 MtrunA17_Chr5g0431511 30.579 121 78 2 20 134 349 469 5.67e-11 60.1
Msa1275410 MtrunA17_Chr4g0004601 31.452 124 79 3 23 140 386 509 6.68e-11 59.7
Msa1275410 MtrunA17_Chr2g0314721 36.567 134 75 5 24 147 359 492 6.91e-11 59.7
Msa1275410 MtrunA17_Chr8g0364631 29.457 129 76 4 21 134 347 475 8.00e-11 59.3
Msa1275410 MtrunA17_Chr1g0205361 35.965 114 67 3 27 134 351 464 8.20e-11 59.3
Msa1275410 MtrunA17_Chr3g0117301 34.188 117 69 3 25 133 1 117 9.11e-11 56.2
Msa1275410 MtrunA17_Chr4g0028321 32.292 96 60 1 47 137 32 127 9.13e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275410 AT2G32440.2 57.764 161 66 2 1 160 327 486 2.46e-65 207
Msa1275410 AT2G32440.1 57.764 161 66 2 1 160 327 486 2.46e-65 207
Msa1275410 AT1G05160.2 59.119 159 63 2 2 158 329 487 5.98e-65 206
Msa1275410 AT1G05160.1 59.119 159 63 2 2 158 329 487 5.98e-65 206
Msa1275410 AT2G29090.3 43.448 145 80 2 15 158 241 384 1.07e-33 122
Msa1275410 AT2G29090.2 43.448 145 80 2 15 158 336 479 7.60e-33 122
Msa1275410 AT2G29090.1 43.448 145 80 2 15 158 336 479 7.60e-33 122
Msa1275410 AT3G19270.2 39.744 156 92 2 2 156 307 461 7.60e-32 119
Msa1275410 AT3G44970.1 40.789 152 83 5 1 147 313 462 1.01e-29 113
Msa1275410 AT3G19270.1 42.105 133 75 2 2 133 307 438 1.10e-29 112
Msa1275410 AT4G19230.1 43.284 134 74 2 21 153 322 454 3.53e-29 111
Msa1275410 AT3G13730.2 48.148 108 53 2 27 132 358 464 6.79e-29 110
Msa1275410 AT5G05690.3 43.478 138 71 4 1 133 187 322 7.01e-29 109
Msa1275410 AT3G13730.1 47.706 109 54 2 27 133 358 465 7.82e-29 110
Msa1275410 AT4G19230.2 47.863 117 59 2 21 136 322 437 1.01e-28 110
Msa1275410 AT5G05690.1 43.478 138 71 4 1 133 306 441 3.60e-28 108
Msa1275410 AT5G45340.1 40.000 135 79 2 20 153 321 454 5.03e-28 108
Msa1275410 AT1G55940.2 43.571 140 75 3 2 137 330 469 1.12e-27 107
Msa1275410 AT5G36130.1 37.143 140 86 2 25 162 1 140 4.41e-27 99.8
Msa1275410 AT1G55940.1 43.284 134 72 3 2 131 330 463 4.15e-26 103
Msa1275410 AT4G36380.1 44.248 113 59 2 25 133 374 486 1.06e-25 102
Msa1275410 AT5G45340.2 43.478 115 63 2 20 133 321 434 1.55e-25 101
Msa1275410 AT1G12740.1 38.571 140 81 3 1 136 308 446 2.22e-25 101
Msa1275410 AT1G12740.2 38.571 140 81 3 1 136 314 452 2.54e-25 101
Msa1275410 AT5G36110.1 37.594 133 79 2 20 148 333 465 5.27e-25 100
Msa1275410 AT5G48000.2 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.4 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.7 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.6 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.5 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.3 40.741 135 71 4 24 150 337 470 5.54e-25 100
Msa1275410 AT5G48000.1 40.741 135 71 4 24 150 378 511 7.17e-25 100
Msa1275410 AT3G50660.1 38.365 159 80 5 3 144 339 496 1.55e-24 99.4
Msa1275410 AT1G78490.1 44.444 117 60 3 25 137 338 453 1.56e-24 99.0
Msa1275410 AT1G12740.4 38.356 146 79 4 1 136 308 452 1.34e-23 96.3
Msa1275410 AT2G42850.1 34.194 155 97 3 9 162 331 481 3.23e-23 95.5
Msa1275410 AT1G19630.3 36.957 138 82 4 1 136 315 449 7.86e-22 91.3
Msa1275410 AT5G14400.3 50.649 77 38 0 57 133 313 389 1.01e-21 90.5
Msa1275410 AT5G14400.1 44.318 88 49 0 57 144 259 346 1.49e-21 89.7
Msa1275410 AT5G14400.2 44.318 88 49 0 57 144 313 400 2.10e-21 89.7
Msa1275410 AT1G73340.1 39.683 126 66 3 20 136 332 456 2.52e-21 90.1
Msa1275410 AT1G19630.1 35.971 139 84 4 1 137 315 450 2.97e-21 89.7
Msa1275410 AT5G38970.2 33.846 130 84 2 10 137 232 361 1.24e-20 87.4
Msa1275410 AT5G38970.4 33.846 130 84 2 10 137 232 361 1.24e-20 87.4
Msa1275410 AT5G38970.1 35.537 121 76 2 19 137 322 442 1.82e-20 87.4
Msa1275410 AT3G30180.1 35.833 120 75 2 17 134 320 439 6.01e-20 85.9
Msa1275410 AT1G65670.1 33.077 130 82 3 2 127 306 434 3.38e-18 81.3
Msa1275410 AT4G15310.1 36.923 130 77 4 2 127 313 441 5.81e-18 80.5
Msa1275410 AT4G15300.3 31.783 129 83 3 2 126 300 427 7.95e-18 80.1
Msa1275410 AT4G15300.1 31.783 129 83 3 2 126 322 449 8.46e-18 80.1
Msa1275410 AT4G15300.2 31.783 129 83 3 2 126 310 437 8.48e-18 80.1
Msa1275410 AT4G15393.2 35.714 112 67 3 20 127 327 437 2.28e-17 78.6
Msa1275410 AT3G30290.1 33.588 131 82 4 1 127 239 368 4.58e-17 77.8
Msa1275410 AT3G28740.1 33.607 122 78 2 20 139 351 471 4.40e-16 75.1
Msa1275410 AT2G26170.2 39.316 117 63 3 24 133 292 407 8.02e-16 74.3
Msa1275410 AT2G26170.1 37.931 116 66 2 24 133 375 490 1.06e-15 73.9
Msa1275410 AT3G26270.1 34.532 139 83 3 3 133 332 470 2.41e-15 72.8
Msa1275410 AT5G05690.2 44.681 94 48 3 1 92 306 397 2.49e-15 72.8
Msa1275410 AT4G15396.3 33.898 118 72 4 20 133 329 444 3.10e-15 72.4
Msa1275410 AT4G15396.1 33.929 112 69 3 20 127 329 439 4.25e-15 72.4
Msa1275410 AT5G67310.1 36.975 119 72 2 21 137 355 472 5.80e-15 72.0
Msa1275410 AT3G53300.1 35.833 120 71 2 3 116 328 447 6.60e-15 71.6
Msa1275410 AT4G37430.1 34.783 115 70 2 27 136 350 464 1.98e-14 70.5
Msa1275410 AT5G35715.1 35.833 120 71 2 3 116 266 385 7.77e-14 68.6
Msa1275410 AT1G66540.2 34.711 121 60 3 27 137 178 289 8.38e-14 68.2
Msa1275410 AT4G37360.1 34.513 113 71 2 27 137 350 461 1.23e-13 68.2
Msa1275410 AT4G37410.1 34.746 118 72 2 27 139 347 464 1.24e-13 68.2
Msa1275410 AT1G66540.1 34.711 121 60 3 27 137 237 348 1.56e-13 67.4
Msa1275410 AT3G26280.1 37.273 110 63 2 13 116 343 452 1.86e-13 67.4
Msa1275410 AT3G26280.2 37.273 110 63 2 13 116 360 469 1.93e-13 67.4
Msa1275410 AT3G26230.1 36.752 117 64 3 21 127 347 463 1.97e-13 67.4
Msa1275410 AT4G37400.1 31.356 118 74 2 27 137 345 462 2.09e-13 67.4
Msa1275410 AT4G37310.1 30.935 139 89 3 3 134 332 470 3.06e-13 67.0
Msa1275410 AT5G57220.1 33.628 113 72 2 27 137 345 456 5.02e-13 66.2
Msa1275410 AT4G31950.1 32.812 128 73 4 21 135 353 480 6.70e-13 65.9
Msa1275410 AT4G31940.1 33.333 120 67 3 21 127 365 484 7.07e-13 65.9
Msa1275410 AT5G04330.1 33.058 121 73 3 16 128 345 465 1.03e-12 65.5
Msa1275410 AT4G22710.1 33.113 151 78 6 24 152 371 520 1.65e-12 64.7
Msa1275410 AT4G37340.1 32.743 113 73 2 27 137 350 461 1.90e-12 64.7
Msa1275410 AT4G37370.1 30.345 145 90 5 27 161 349 492 2.16e-12 64.3
Msa1275410 AT4G22690.1 33.113 151 78 6 24 152 402 551 2.20e-12 64.3
Msa1275410 AT5G25120.1 34.375 128 73 3 20 141 340 462 2.25e-12 64.3
Msa1275410 AT1G74550.1 29.655 145 96 2 1 139 310 454 3.94e-12 63.5
Msa1275410 AT5G36220.2 32.743 113 73 2 27 137 210 321 4.04e-12 63.5
Msa1275410 AT2G45580.2 29.730 148 81 3 27 151 209 356 4.29e-12 63.5
Msa1275410 AT4G36220.1 31.579 114 72 2 21 128 363 476 4.37e-12 63.5
Msa1275410 AT3G26180.2 31.538 130 81 3 12 133 206 335 4.80e-12 63.2
Msa1275410 AT3G26170.1 30.935 139 88 3 3 133 331 469 5.24e-12 63.2
Msa1275410 AT3G50660.2 41.237 97 51 3 3 94 339 434 6.42e-12 63.2
Msa1275410 AT2G45580.1 29.730 148 81 3 27 151 363 510 6.52e-12 63.2
Msa1275410 AT5G36220.1 32.743 113 73 2 27 137 356 467 6.66e-12 63.2
Msa1275410 AT1G11600.1 32.374 139 72 4 21 148 355 482 7.80e-12 62.8
Msa1275410 AT1G33730.1 38.462 117 64 3 24 134 222 336 9.09e-12 62.4
Msa1275410 AT1G33730.2 38.462 117 64 3 24 134 222 336 9.09e-12 62.4
Msa1275410 AT3G26150.1 34.167 120 73 2 3 116 331 450 1.13e-11 62.4
Msa1275410 AT3G26180.1 31.538 130 81 3 12 133 340 469 1.17e-11 62.4
Msa1275410 AT3G26290.1 32.800 125 74 3 13 127 337 461 1.18e-11 62.4
Msa1275410 AT3G26290.2 32.800 125 74 3 13 127 350 474 1.20e-11 62.4
Msa1275410 AT3G26210.1 30.833 120 77 2 3 116 330 449 1.29e-11 62.0
Msa1275410 AT3G53290.1 36.036 111 65 2 12 116 244 354 1.38e-11 62.0
Msa1275410 AT3G26300.1 32.800 125 74 3 13 127 337 461 1.82e-11 61.6
Msa1275410 AT3G26200.1 32.759 116 72 2 3 112 328 443 2.50e-11 61.2
Msa1275410 AT4G15330.2 30.065 153 83 4 27 155 329 481 3.09e-11 61.2
Msa1275410 AT5G04660.1 28.906 128 82 3 15 133 352 479 3.25e-11 60.8
Msa1275410 AT3G53280.1 33.621 116 71 2 3 112 326 441 3.69e-11 60.8
Msa1275410 AT5G25130.1 34.375 128 73 3 20 141 340 462 3.98e-11 60.8
Msa1275410 AT4G15330.1 30.065 153 83 4 27 155 357 509 4.21e-11 60.8
Msa1275410 AT4G37330.1 32.174 115 75 2 25 137 345 458 4.68e-11 60.5
Msa1275410 AT1G13080.1 30.303 132 86 2 3 128 331 462 4.70e-11 60.5
Msa1275410 AT2G23220.1 29.752 121 82 2 21 139 359 478 4.82e-11 60.5
Msa1275410 AT1G78490.2 48.529 68 32 2 25 90 338 404 4.87e-11 60.5
Msa1275410 AT2G45550.1 32.456 114 71 2 27 134 361 474 5.35e-11 60.5
Msa1275410 AT3G25180.1 26.016 123 85 2 21 137 357 479 5.62e-11 60.5
Msa1275410 AT2G45560.1 32.308 130 80 3 20 143 354 481 5.78e-11 60.5
Msa1275410 AT1G13080.2 31.111 135 83 3 3 127 213 347 5.93e-11 60.1
Msa1275410 AT1G13100.1 31.579 133 80 3 3 129 327 454 6.41e-11 60.1
Msa1275410 AT3G26190.1 34.483 116 70 2 3 112 328 443 6.50e-11 60.1
Msa1275410 AT5G25140.1 34.375 128 73 3 20 141 340 462 6.74e-11 60.1
Msa1275410 AT1G28430.1 37.374 99 52 2 24 112 356 454 7.44e-11 60.1
Msa1275410 AT2G23190.1 31.092 119 79 2 21 137 388 505 7.88e-11 60.1
Msa1275410 AT3G26220.1 37.607 117 66 3 3 112 331 447 8.11e-11 59.7

Find 39 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTACATTCCATCTTTC+TGG 0.078540 8_3:-9333064 None:intergenic
GGATTAAATTCTTCCGGATT+TGG 0.214998 8_3:-9333043 None:intergenic
TCTAACATGCATAAATAAAA+TGG 0.215449 8_3:+9333712 Msa1275410:three_prime_UTR
ACAATACTTACTTGTAATTA+AGG 0.221344 8_3:-9333409 None:intergenic
ATGTAAGTAAGAGGACATTT+TGG 0.296841 8_3:-9333581 None:intergenic
CTTTCTGGATTAAATTCTTC+CGG 0.306481 8_3:-9333049 None:intergenic
AGACAGTTGTCTGTTGGTTT+AGG 0.309282 8_3:-9333611 None:intergenic
AGTAGTACTTTCCATCCTTT+TGG 0.322330 8_3:-9332983 None:intergenic
ACATTTCTTCCCTTTGGAAT+AGG 0.342723 8_3:+9333320 Msa1275410:CDS
GGAAGAAATGTTCCTGTTGT+AGG 0.358226 8_3:-9333308 None:intergenic
CTATGCAACTGATAGAAGTT+TGG 0.365871 8_3:+9333976 Msa1275410:three_prime_UTR
ACAGGAACATTTCTTCCCTT+TGG 0.369888 8_3:+9333314 Msa1275410:CDS
TTGTCTGTTGGTTTAGGAAC+TGG 0.386955 8_3:-9333605 None:intergenic
GATGAAATGGTGTAGAAATA+TGG 0.398494 8_3:-9333387 None:intergenic
ACTTGTAATTAAGGATGAAA+TGG 0.408580 8_3:-9333400 None:intergenic
AAGCTGAAAAGTTACTGATA+TGG 0.418256 8_3:-9332825 None:intergenic
TCCGGATTTGGATGATGCTC+AGG 0.425004 8_3:-9333031 None:intergenic
AAATATGGTCATTTCAAGTC+TGG 0.455910 8_3:-9333372 None:intergenic
TTAGGTTATTTCATACCAAA+AGG 0.463337 8_3:+9332968 Msa1275410:intron
TTGGCTAAGAGCGGTTCATA+TGG 0.466054 8_3:+9333006 Msa1275410:CDS
GTTATTTCATACCAAAAGGA+TGG 0.482217 8_3:+9332972 Msa1275410:CDS
TAGGATTACAACCCTACAAC+AGG 0.482292 8_3:+9333296 Msa1275410:intron
AGTCTGGCTAGGTCACTTCC+TGG 0.485183 8_3:-9333356 None:intergenic
AAGGATGGAAAGTACTACTT+TGG 0.486864 8_3:+9332987 Msa1275410:CDS
TCCTGAGCATCATCCAAATC+CGG 0.493825 8_3:+9333030 Msa1275410:CDS
GAAGAAATGTTCCTGTTGTA+GGG 0.494338 8_3:-9333307 None:intergenic
AAGAATTTAATCCAGAAAGA+TGG 0.500476 8_3:+9333053 Msa1275410:CDS
TGTGAGATTTATTTATCAAG+TGG 0.515751 8_3:+9333805 Msa1275410:three_prime_UTR
GGAACTGGTATGTAAGTAAG+AGG 0.516228 8_3:-9333590 None:intergenic
TCTTAAATTGTAATTCATTG+AGG 0.527811 8_3:+9333661 Msa1275410:exon
GCAACTGATGTGAACATCAA+TGG 0.539722 8_3:+9332859 Msa1275410:CDS
GTGTCGCGAGCCTATTCCAA+AGG 0.566028 8_3:-9333330 None:intergenic
TTAGCGAGACAGTTGTCTGT+TGG 0.573999 8_3:-9333617 None:intergenic
GAATTACAATTTAAGATCAC+CGG 0.579041 8_3:-9333654 None:intergenic
TGGTCATTTCAAGTCTGGCT+AGG 0.583521 8_3:-9333367 None:intergenic
AACAGACAACTGTCTCGCTA+AGG 0.597900 8_3:+9333619 Msa1275410:CDS
TGTCGCGAGCCTATTCCAAA+GGG 0.598285 8_3:-9333329 None:intergenic
GCTAAGGTTATAAAGCTCTC+CGG 0.610602 8_3:+9333635 Msa1275410:CDS
AGTACTACTTTGGCTAAGAG+CGG 0.654612 8_3:+9332997 Msa1275410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAGGAAACTAAAAAAA+TGG + chr8_3:9332625-9332644 Msa1275410:CDS 15.0%
!! ATGAATTATATATAGACAAT+AGG - chr8_3:9332685-9332704 None:intergenic 15.0%
!!! ATGTCTTTGTTAAATATTTT+AGG + chr8_3:9332950-9332969 Msa1275410:intron 15.0%
!! AACAAAAATAAGTTTAATGA+AGG - chr8_3:9333184-9333203 None:intergenic 15.0%
!!! CTAATTTATTTTTCTTTTCA+AGG + chr8_3:9333486-9333505 Msa1275410:intron 15.0%
!!! CTTTTTCTTCTTAATTTTAT+AGG + chr8_3:9333543-9333562 Msa1275410:intron 15.0%
!! TATTAAGGAAACTAAAAAAA+TGG + chr8_3:9332625-9332644 Msa1275410:CDS 15.0%
!! ATGAATTATATATAGACAAT+AGG - chr8_3:9332685-9332704 None:intergenic 15.0%
!!! ATGTCTTTGTTAAATATTTT+AGG + chr8_3:9332950-9332969 Msa1275410:intron 15.0%
!! AACAAAAATAAGTTTAATGA+AGG - chr8_3:9333184-9333203 None:intergenic 15.0%
!!! CTAATTTATTTTTCTTTTCA+AGG + chr8_3:9333486-9333505 Msa1275410:intron 15.0%
!!! CTTTTTCTTCTTAATTTTAT+AGG + chr8_3:9333543-9333562 Msa1275410:intron 15.0%
!!! ACTCTATTTCTTGTTATTTT+CGG + chr8_3:9332900-9332919 Msa1275410:intron 20.0%
!!! TGTTATTTTCGGTTATTAAA+AGG + chr8_3:9332911-9332930 Msa1275410:intron 20.0%
!!! GTTATTTTCGGTTATTAAAA+GGG + chr8_3:9332912-9332931 Msa1275410:intron 20.0%
!! AGTAATTGTTAAACTCAAAT+TGG - chr8_3:9333131-9333150 None:intergenic 20.0%
!! ACAATACTTACTTGTAATTA+AGG - chr8_3:9333412-9333431 None:intergenic 20.0%
!! TCTTAAATTGTAATTCATTG+AGG + chr8_3:9333661-9333680 Msa1275410:exon 20.0%
!! TCTAACATGCATAAATAAAA+TGG + chr8_3:9333712-9333731 Msa1275410:three_prime_UTR 20.0%
!! CAATAGTAAAAAAATACTTG+TGG - chr8_3:9333749-9333768 None:intergenic 20.0%
!!! CACAAGTATTTTTTTACTAT+TGG + chr8_3:9333747-9333766 Msa1275410:three_prime_UTR 20.0%
!!! ACTCTATTTCTTGTTATTTT+CGG + chr8_3:9332900-9332919 Msa1275410:intron 20.0%
!!! TGTTATTTTCGGTTATTAAA+AGG + chr8_3:9332911-9332930 Msa1275410:intron 20.0%
!!! GTTATTTTCGGTTATTAAAA+GGG + chr8_3:9332912-9332931 Msa1275410:intron 20.0%
!! AGTAATTGTTAAACTCAAAT+TGG - chr8_3:9333131-9333150 None:intergenic 20.0%
!! ACAATACTTACTTGTAATTA+AGG - chr8_3:9333412-9333431 None:intergenic 20.0%
!! TCTTAAATTGTAATTCATTG+AGG + chr8_3:9333661-9333680 Msa1275410:exon 20.0%
!! TCTAACATGCATAAATAAAA+TGG + chr8_3:9333712-9333731 Msa1275410:three_prime_UTR 20.0%
!! CAATAGTAAAAAAATACTTG+TGG - chr8_3:9333749-9333768 None:intergenic 20.0%
!!! CACAAGTATTTTTTTACTAT+TGG + chr8_3:9333747-9333766 Msa1275410:three_prime_UTR 20.0%
!! GCAAAAACGATTTTGTATTA+AGG + chr8_3:9332610-9332629 Msa1275410:CDS 25.0%
! AAAAAATGGTATATCTCTCT+CGG + chr8_3:9332639-9332658 Msa1275410:CDS 25.0%
! GAAAATAACAAGAAATAGAG+TGG - chr8_3:9332901-9332920 None:intergenic 25.0%
!! TTAGGTTATTTCATACCAAA+AGG + chr8_3:9332968-9332987 Msa1275410:intron 25.0%
! AAGAATTTAATCCAGAAAGA+TGG + chr8_3:9333053-9333072 Msa1275410:CDS 25.0%
! TGAGTTTAACAATTACTAAG+AGG + chr8_3:9333134-9333153 Msa1275410:intron 25.0%
! TTGAGTTATTGTGTTAATTG+AGG + chr8_3:9333253-9333272 Msa1275410:intron 25.0%
! ACTTGTAATTAAGGATGAAA+TGG - chr8_3:9333403-9333422 None:intergenic 25.0%
!! GAATTACAATTTAAGATCAC+CGG - chr8_3:9333657-9333676 None:intergenic 25.0%
! TGTGAGATTTATTTATCAAG+TGG + chr8_3:9333805-9333824 Msa1275410:three_prime_UTR 25.0%
!! GCTTTTTATAGATACAAACT+AGG - chr8_3:9333900-9333919 None:intergenic 25.0%
!! GCAAAAACGATTTTGTATTA+AGG + chr8_3:9332610-9332629 Msa1275410:CDS 25.0%
! AAAAAATGGTATATCTCTCT+CGG + chr8_3:9332639-9332658 Msa1275410:CDS 25.0%
! GAAAATAACAAGAAATAGAG+TGG - chr8_3:9332901-9332920 None:intergenic 25.0%
!! TTAGGTTATTTCATACCAAA+AGG + chr8_3:9332968-9332987 Msa1275410:intron 25.0%
! AAGAATTTAATCCAGAAAGA+TGG + chr8_3:9333053-9333072 Msa1275410:CDS 25.0%
! TGAGTTTAACAATTACTAAG+AGG + chr8_3:9333134-9333153 Msa1275410:intron 25.0%
! TTGAGTTATTGTGTTAATTG+AGG + chr8_3:9333253-9333272 Msa1275410:intron 25.0%
! ACTTGTAATTAAGGATGAAA+TGG - chr8_3:9333403-9333422 None:intergenic 25.0%
!! GAATTACAATTTAAGATCAC+CGG - chr8_3:9333657-9333676 None:intergenic 25.0%
! TGTGAGATTTATTTATCAAG+TGG + chr8_3:9333805-9333824 Msa1275410:three_prime_UTR 25.0%
!! GCTTTTTATAGATACAAACT+AGG - chr8_3:9333900-9333919 None:intergenic 25.0%
!! AATACAAAATCGTTTTTGCG+AGG - chr8_3:9332609-9332628 None:intergenic 30.0%
AAAAATGGTATATCTCTCTC+GGG + chr8_3:9332640-9332659 Msa1275410:CDS 30.0%
AAGCTGAAAAGTTACTGATA+TGG - chr8_3:9332828-9332847 None:intergenic 30.0%
! TCAGTAACTTTTCAGCTTTT+CGG + chr8_3:9332830-9332849 Msa1275410:CDS 30.0%
AATAACAAGAAATAGAGTGG+AGG - chr8_3:9332898-9332917 None:intergenic 30.0%
! GTTATTTCATACCAAAAGGA+TGG + chr8_3:9332972-9332991 Msa1275410:CDS 30.0%
CTTTCTGGATTAAATTCTTC+CGG - chr8_3:9333052-9333071 None:intergenic 30.0%
! ATGATGTTGATTATGTGCTT+AGG + chr8_3:9333277-9333296 Msa1275410:intron 30.0%
! AAATATGGTCATTTCAAGTC+TGG - chr8_3:9333375-9333394 None:intergenic 30.0%
GATGAAATGGTGTAGAAATA+TGG - chr8_3:9333390-9333409 None:intergenic 30.0%
! ATGTAAGTAAGAGGACATTT+TGG - chr8_3:9333584-9333603 None:intergenic 30.0%
!! AATACAAAATCGTTTTTGCG+AGG - chr8_3:9332609-9332628 None:intergenic 30.0%
AAAAATGGTATATCTCTCTC+GGG + chr8_3:9332640-9332659 Msa1275410:CDS 30.0%
AAGCTGAAAAGTTACTGATA+TGG - chr8_3:9332828-9332847 None:intergenic 30.0%
! TCAGTAACTTTTCAGCTTTT+CGG + chr8_3:9332830-9332849 Msa1275410:CDS 30.0%
AATAACAAGAAATAGAGTGG+AGG - chr8_3:9332898-9332917 None:intergenic 30.0%
! GTTATTTCATACCAAAAGGA+TGG + chr8_3:9332972-9332991 Msa1275410:CDS 30.0%
CTTTCTGGATTAAATTCTTC+CGG - chr8_3:9333052-9333071 None:intergenic 30.0%
! ATGATGTTGATTATGTGCTT+AGG + chr8_3:9333277-9333296 Msa1275410:intron 30.0%
! AAATATGGTCATTTCAAGTC+TGG - chr8_3:9333375-9333394 None:intergenic 30.0%
GATGAAATGGTGTAGAAATA+TGG - chr8_3:9333390-9333409 None:intergenic 30.0%
! ATGTAAGTAAGAGGACATTT+TGG - chr8_3:9333584-9333603 None:intergenic 30.0%
GTTTCATCAATAACCTGCTA+GGG - chr8_3:9332799-9332818 None:intergenic 35.0%
TGTTTCATCAATAACCTGCT+AGG - chr8_3:9332800-9332819 None:intergenic 35.0%
! TAACTTTTCAGCTTTTCGGA+AGG + chr8_3:9332834-9332853 Msa1275410:CDS 35.0%
! AGTAGTACTTTCCATCCTTT+TGG - chr8_3:9332986-9333005 None:intergenic 35.0%
!! AAGGATGGAAAGTACTACTT+TGG + chr8_3:9332987-9333006 Msa1275410:CDS 35.0%
GGATTAAATTCTTCCGGATT+TGG - chr8_3:9333046-9333065 None:intergenic 35.0%
CTACTTACATTCCATCTTTC+TGG - chr8_3:9333067-9333086 None:intergenic 35.0%
CAGAAAGATGGAATGTAAGT+AGG + chr8_3:9333065-9333084 Msa1275410:intron 35.0%
GAAGAAATGTTCCTGTTGTA+GGG - chr8_3:9333310-9333329 None:intergenic 35.0%
!! ACATTTCTTCCCTTTGGAAT+AGG + chr8_3:9333320-9333339 Msa1275410:CDS 35.0%
CTATGCAACTGATAGAAGTT+TGG + chr8_3:9333976-9333995 Msa1275410:three_prime_UTR 35.0%
GTTTCATCAATAACCTGCTA+GGG - chr8_3:9332799-9332818 None:intergenic 35.0%
TGTTTCATCAATAACCTGCT+AGG - chr8_3:9332800-9332819 None:intergenic 35.0%
! TAACTTTTCAGCTTTTCGGA+AGG + chr8_3:9332834-9332853 Msa1275410:CDS 35.0%
! AGTAGTACTTTCCATCCTTT+TGG - chr8_3:9332986-9333005 None:intergenic 35.0%
!! AAGGATGGAAAGTACTACTT+TGG + chr8_3:9332987-9333006 Msa1275410:CDS 35.0%
GGATTAAATTCTTCCGGATT+TGG - chr8_3:9333046-9333065 None:intergenic 35.0%
CTACTTACATTCCATCTTTC+TGG - chr8_3:9333067-9333086 None:intergenic 35.0%
CAGAAAGATGGAATGTAAGT+AGG + chr8_3:9333065-9333084 Msa1275410:intron 35.0%
GAAGAAATGTTCCTGTTGTA+GGG - chr8_3:9333310-9333329 None:intergenic 35.0%
!! ACATTTCTTCCCTTTGGAAT+AGG + chr8_3:9333320-9333339 Msa1275410:CDS 35.0%
CTATGCAACTGATAGAAGTT+TGG + chr8_3:9333976-9333995 Msa1275410:three_prime_UTR 35.0%
!! CAAAATCGTTTTTGCGAGGA+TGG - chr8_3:9332605-9332624 None:intergenic 40.0%
!!! GATTTTTTTCCTACCCTAGC+AGG + chr8_3:9332783-9332802 Msa1275410:intron 40.0%
GCAACTGATGTGAACATCAA+TGG + chr8_3:9332859-9332878 Msa1275410:CDS 40.0%
AGTACTACTTTGGCTAAGAG+CGG + chr8_3:9332997-9333016 Msa1275410:CDS 40.0%
TAGGATTACAACCCTACAAC+AGG + chr8_3:9333296-9333315 Msa1275410:intron 40.0%
GGAAGAAATGTTCCTGTTGT+AGG - chr8_3:9333311-9333330 None:intergenic 40.0%
ACAGGAACATTTCTTCCCTT+TGG + chr8_3:9333314-9333333 Msa1275410:CDS 40.0%
GGAACTGGTATGTAAGTAAG+AGG - chr8_3:9333593-9333612 None:intergenic 40.0%
!! TTGTCTGTTGGTTTAGGAAC+TGG - chr8_3:9333608-9333627 None:intergenic 40.0%
!! AGACAGTTGTCTGTTGGTTT+AGG - chr8_3:9333614-9333633 None:intergenic 40.0%
GCTAAGGTTATAAAGCTCTC+CGG + chr8_3:9333635-9333654 Msa1275410:CDS 40.0%
! AGAAGTTTGGAAAGTGTACC+AGG + chr8_3:9333989-9334008 Msa1275410:three_prime_UTR 40.0%
!! CAAAATCGTTTTTGCGAGGA+TGG - chr8_3:9332605-9332624 None:intergenic 40.0%
!!! GATTTTTTTCCTACCCTAGC+AGG + chr8_3:9332783-9332802 Msa1275410:intron 40.0%
GCAACTGATGTGAACATCAA+TGG + chr8_3:9332859-9332878 Msa1275410:CDS 40.0%
AGTACTACTTTGGCTAAGAG+CGG + chr8_3:9332997-9333016 Msa1275410:CDS 40.0%
TAGGATTACAACCCTACAAC+AGG + chr8_3:9333296-9333315 Msa1275410:intron 40.0%
GGAAGAAATGTTCCTGTTGT+AGG - chr8_3:9333311-9333330 None:intergenic 40.0%
ACAGGAACATTTCTTCCCTT+TGG + chr8_3:9333314-9333333 Msa1275410:CDS 40.0%
GGAACTGGTATGTAAGTAAG+AGG - chr8_3:9333593-9333612 None:intergenic 40.0%
!! TTGTCTGTTGGTTTAGGAAC+TGG - chr8_3:9333608-9333627 None:intergenic 40.0%
!! AGACAGTTGTCTGTTGGTTT+AGG - chr8_3:9333614-9333633 None:intergenic 40.0%
GCTAAGGTTATAAAGCTCTC+CGG + chr8_3:9333635-9333654 Msa1275410:CDS 40.0%
CATCAATAACCTGCTAGGGT+AGG - chr8_3:9332795-9332814 None:intergenic 45.0%
! CTTTTCAGCTTTTCGGAAGG+CGG + chr8_3:9332837-9332856 Msa1275410:CDS 45.0%
TTGGCTAAGAGCGGTTCATA+TGG + chr8_3:9333006-9333025 Msa1275410:CDS 45.0%
TCCTGAGCATCATCCAAATC+CGG + chr8_3:9333030-9333049 Msa1275410:CDS 45.0%
! TGGTCATTTCAAGTCTGGCT+AGG - chr8_3:9333370-9333389 None:intergenic 45.0%
TTAGCGAGACAGTTGTCTGT+TGG - chr8_3:9333620-9333639 None:intergenic 45.0%
AACAGACAACTGTCTCGCTA+AGG + chr8_3:9333619-9333638 Msa1275410:CDS 45.0%
CATCAATAACCTGCTAGGGT+AGG - chr8_3:9332795-9332814 None:intergenic 45.0%
! CTTTTCAGCTTTTCGGAAGG+CGG + chr8_3:9332837-9332856 Msa1275410:CDS 45.0%
TTGGCTAAGAGCGGTTCATA+TGG + chr8_3:9333006-9333025 Msa1275410:CDS 45.0%
TCCTGAGCATCATCCAAATC+CGG + chr8_3:9333030-9333049 Msa1275410:CDS 45.0%
! TGGTCATTTCAAGTCTGGCT+AGG - chr8_3:9333370-9333389 None:intergenic 45.0%
TTAGCGAGACAGTTGTCTGT+TGG - chr8_3:9333620-9333639 None:intergenic 45.0%
AACAGACAACTGTCTCGCTA+AGG + chr8_3:9333619-9333638 Msa1275410:CDS 45.0%
TCCGGATTTGGATGATGCTC+AGG - chr8_3:9333034-9333053 None:intergenic 50.0%
TGTCGCGAGCCTATTCCAAA+GGG - chr8_3:9333332-9333351 None:intergenic 50.0%
TCCGGATTTGGATGATGCTC+AGG - chr8_3:9333034-9333053 None:intergenic 50.0%
TGTCGCGAGCCTATTCCAAA+GGG - chr8_3:9333332-9333351 None:intergenic 50.0%
GTGTCGCGAGCCTATTCCAA+AGG - chr8_3:9333333-9333352 None:intergenic 55.0%
AGTCTGGCTAGGTCACTTCC+TGG - chr8_3:9333359-9333378 None:intergenic 55.0%
GTGTCGCGAGCCTATTCCAA+AGG - chr8_3:9333333-9333352 None:intergenic 55.0%
AGTCTGGCTAGGTCACTTCC+TGG - chr8_3:9333359-9333378 None:intergenic 55.0%
ATAGGCTCGCGACACTGTCC+AGG + chr8_3:9333338-9333357 Msa1275410:CDS 60.0%
ATAGGCTCGCGACACTGTCC+AGG + chr8_3:9333338-9333357 Msa1275410:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 9332572 9334010 9332572 ID=Msa1275410;Name=Msa1275410
chr8_3 mRNA 9332572 9334010 9332572 ID=Msa1275410-mRNA-1;Parent=Msa1275410;Name=Msa1275410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.8|1|1|1|5|337|167
chr8_3 exon 9332572 9332661 9332572 ID=Msa1275410-mRNA-1:exon:3915;Parent=Msa1275410-mRNA-1
chr8_3 exon 9332805 9332880 9332805 ID=Msa1275410-mRNA-1:exon:3916;Parent=Msa1275410-mRNA-1
chr8_3 exon 9332972 9333078 9332972 ID=Msa1275410-mRNA-1:exon:3917;Parent=Msa1275410-mRNA-1
chr8_3 exon 9333299 9333420 9333299 ID=Msa1275410-mRNA-1:exon:3918;Parent=Msa1275410-mRNA-1
chr8_3 exon 9333565 9334010 9333565 ID=Msa1275410-mRNA-1:exon:3919;Parent=Msa1275410-mRNA-1
chr8_3 CDS 9332572 9332661 9332572 ID=Msa1275410-mRNA-1:cds;Parent=Msa1275410-mRNA-1
chr8_3 CDS 9332805 9332880 9332805 ID=Msa1275410-mRNA-1:cds;Parent=Msa1275410-mRNA-1
chr8_3 CDS 9332972 9333078 9332972 ID=Msa1275410-mRNA-1:cds;Parent=Msa1275410-mRNA-1
chr8_3 CDS 9333299 9333420 9333299 ID=Msa1275410-mRNA-1:cds;Parent=Msa1275410-mRNA-1
chr8_3 CDS 9333565 9333673 9333565 ID=Msa1275410-mRNA-1:cds;Parent=Msa1275410-mRNA-1
chr8_3 three_prime_UTR 9333674 9334010 9333674 ID=Msa1275410-mRNA-1:three_prime_utr;Parent=Msa1275410-mRNA-1
Gene Sequence

>Msa1275410

GAAGAGCAAGAAGATATCTTGATAGCAAGACCATCCTCGCAAAAACGATTTTGTATTAAGGAAACTAAAAAAATGGTATATCTCTCTCGGGTTATTGATGAAACATTGCGCCATATCAGTAACTTTTCAGCTTTTCGGAAGGCGGCAACTGATGTGAACATCAATGGTTATTTCATACCAAAAGGATGGAAAGTACTACTTTGGCTAAGAGCGGTTCATATGGATCCTGAGCATCATCCAAATCCGGAAGAATTTAATCCAGAAAGATGGAATGATTACAACCCTACAACAGGAACATTTCTTCCCTTTGGAATAGGCTCGCGACACTGTCCAGGAAGTGACCTAGCCAGACTTGAAATGACCATATTTCTACACCATTTCATCCTTAATTACAAGTTTGAGCGAATAAATCCAAAATGTCCTCTTACTTACATACCAGTTCCTAAACCAACAGACAACTGTCTCGCTAAGGTTATAAAGCTCTCCGGTGATCTTAAATTGTAA
Protein sequence

>Msa1275410

EEQEDILIARPSSQKRFCIKETKKMVYLSRVIDETLRHISNFSAFRKAATDVNINGYFIPKGWKVLLWLRAVHMDPEHHPNPEEFNPERWNDYNPTTGTFLPFGIGSRHCPGSDLARLEMTIFLHHFILNYKFERINPKCPLTYIPVPKPTDNCLAKVIKLSGDLKL*